Pregenerated sensors for CIAO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002280Ensembl transcript IDs: ENSMUST00000002350.11, ENSMUST00000131458.8, ENSMUST00000134108.8, ENSMUST00000237541.2
Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGGTCCTGGAGGCCCTCTGCAGGGAGCGAGCGCGCTTCCAGCCTaGTGTGGAGCCACCACAGCCGCAGGTTCGGGCACTCCTGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: PGPGGPLQGASALPA*CGATTAAGSGTPGL Trigger: AAGGCCAGGAGTGCCCGAACCTGCGGCTGTGGTGGCTCCACAGCAGGCTGGAAGCGCGCTCGCTCCCTGCAGAGGGCCTCCAGGACCTGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
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| 3UTR GCA 90 bp | TGCAGCAGGCGGCTGGCCCGCTCTGAGTCCTCTCCTTGCAGCCAGTaGTGGTACAGCTCCTGGACCCCCGGTGCATCTTCGGGCGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: CSRRLARSESSPCSQ*WYSSWTPGASSGAS Trigger: TGAGGCGCCCGAAGATGCACCGGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGAGGACTCAGAGCGGGCCAGCCGCCTGCTGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR CCA 90 bp | TCCTGGAGGCCCTCTGCAGGGAGCGAGCGCGCTTCCAGCCTGCTGTaGAGCCACCACAGCCGCAGGTTCGGGCACTCCTGGCCTTACAGT | + |
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Preference number: 1 (lower is better) Translates to: SWRPSAGSERASSLL*SHHSRRFGHSWPYS Trigger: ACTGTAAGGCCAGGAGTGCCCGAACCTGCGGCTGTGGTGGCTCCACAGCAGGCTGGAAGCGCGCTCGCTCCCTGCAGAGGGCCTCCAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
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| 3UTR CCA 90 bp | AGCAGGCGGCTGGCCCGCTCTGAGTCCTCTCCTTGCAGCCAGTGCTaGTACAGCTCCTGGACCCCCGGTGCATCTTCGGGCGCCTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: SRRLARSESSPCSQC*YSSWTPGASSGASV Trigger: GACTGAGGCGCCCGAAGATGCACCGGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGAGGACTCAGAGCGGGCCAGCCGCCTGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR CCA 90 bp | GCCCGCTCTGAGTCCTCTCCTTGCAGCCAGTGCTGGTACAGCTCCTaGACCCCCGGTGCATCTTCGGGCGCCTCAGTCCTCACCATGCTG | + |
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Preference number: 1 (lower is better) Translates to: ARSESSPCSQCWYSS*TPGASSGASVLTML Trigger: CAGCATGGTGAGGACTGAGGCGCCCGAAGATGCACCGGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGAGGACTCAGAGCGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR TCA 90 bp | CTCCACGGCATGGTATTGTGTGTGCAGCAGGCGGCTGGCCCGCTCTaGGTCCTCTCCTTGCAGCCAGTGCTGGTACAGCTCCTGGACCCC | + |
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Preference number: 1 (lower is better) Translates to: LHGMVLCVQQAAGPL*VLSLQPVLVQLLDP Trigger: GGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGAGGACTCAGAGCGGGCCAGCCGCCTGCTGCACACACAATACCATGCCGTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR GCA 90 bp | GCTCCTGGACCCCCGGTGCATCTTCGGGCGCCTCAGTCCTCACCATaGTGTACAGTCTTTCCAGCTGCTGAAGGAGCTCGCTGCCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: APGPPVHLRAPQSSP*CTVFPAAEGARCPL Trigger: CAGAGGGCAGCGAGCTCCTTCAGCAGCTGGAAAGACTGTACAGCATGGTGAGGACTGAGGCGCCCGAAGATGCACCGGGGGTCCAGGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR GCA 90 bp | TATTGTGTGTGCAGCAGGCGGCTGGCCCGCTCTGAGTCCTCTCCTTaGAGCCAGTGCTGGTACAGCTCCTGGACCCCCGGTGCATCTTCG | + |
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Preference number: 1 (lower is better) Translates to: YCVCSRRLARSESSP*SQCWYSSWTPGASS Trigger: CGAAGATGCACCGGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGAGGACTCAGAGCGGGCCAGCCGCCTGCTGCACACACAATA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR TCA 90 bp | TCGGGCGCCTCAGTCCTCACCATGCTGTACAGTCTTTCCAGCTGCTaGAGGAGCTCGCTGCCCTCTGTATCCGGAGCCTTGAGCTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: SGASVLTMLYSLSSC*RSSLPSVSGALSWP Trigger: GGGCCAGCTCAAGGCTCCGGATACAGAGGGCAGCGAGCTCCTTCAGCAGCTGGAAAGACTGTACAGCATGGTGAGGACTGAGGCGCCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR CCA 90 bp | CAGTGTCTGTGGGGTCCAGCCGAAACCTGGCAGCCAGTGATGCTCTaGACTGCGGCGATATGGAAACGACCACCAGCCGCTGCTGACCAG | + |
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Preference number: 1 (lower is better) Translates to: QCLWGPAETWQPVML*TAAIWKRPPAAADQ Trigger: CTGGTCAGCAGCGGCTGGTGGTCGTTTCCATATCGCCGCAGTCCAGAGCATCACTGGCTGCCAGGTTTCGGCTGGACCCCACAGACACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
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| 3UTR CCA 90 bp | AGCTGGGCTTCTCCACGGCATGGTATTGTGTGTGCAGCAGGCGGCTaGCCCGCTCTGAGTCCTCTCCTTGCAGCCAGTGCTGGTACAGCT | + |
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Preference number: 1 (lower is better) Translates to: SWASPRHGIVCAAGG*PALSPLLAASAGTA Trigger: AGCTGTACCAGCACTGGCTGCAAGGAGAGGACTCAGAGCGGGCCAGCCGCCTGCTGCACACACAATACCATGCCGTGGAGAAGCCCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR TCA 90 bp | TTTCCTGGCAGTGTCTGTGGGGTCCAGCCGAAACCTGGCAGCCAGTaGTGCTCTGGACTGCGGCGATATGGAAACGACCACCAGCCGCTG | + |
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Preference number: 1 (lower is better) Translates to: FPGSVCGVQPKPGSQ*CSGLRRYGNDHQPL Trigger: CAGCGGCTGGTGGTCGTTTCCATATCGCCGCAGTCCAGAGCATCACTGGCTGCCAGGTTTCGGCTGGACCCCACAGACACTGCCAGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
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| 3UTR GCA 90 bp | GTCCTCTCCTTGCAGCCAGTGCTGGTACAGCTCCTGGACCCCCGGTaGATCTTCGGGCGCCTCAGTCCTCACCATGCTGTACAGTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: VLSLQPVLVQLLDPR*IFGRLSPHHAVQSF Trigger: GAAAGACTGTACAGCATGGTGAGGACTGAGGCGCCCGAAGATGCACCGGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR CCA 90 bp | CCTGCACTTTATGTGGGCTGCAGGCAACATTACCAGCCAGAGACATaGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACT | + |
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Preference number: 1 (lower is better) Translates to: PALYVGCRQHYQPET*VTHLQGPTCSQCPT Trigger: AGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCCATGTCTCTGGCTGGTAATGTTGCCTGCAGCCCACATAAAGTGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| 3UTR CCA 90 bp | AGCCTGGGCAGGCGGAAGCCAGCACAGGCAAGGCCTCTCTGGAGTTaGCTTGCTCTCGGAAGCGCTGCACAAACTCTTTTTGGCTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: SLGRRKPAQARPLWS*LALGSAAQTLFGFP Trigger: TGGAAAGCCAAAAAGAGTTTGTGCAGCGCTTCCGAGAGCAAGCCAACTCCAGAGAGGCCTTGCCTGTGCTGGCTTCCGCCTGCCCAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
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| 3UTR GCA 90 bp | GGGCAGGCGGAAGCCAGCACAGGCAAGGCCTCTCTGGAGTTGGCTTaGTCTCGGAAGCGCTGCACAAACTCTTTTTGGCTTTCCAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: GQAEASTGKASLELA*SRKRCTNSFWLSKR Trigger: CCTTTTGGAAAGCCAAAAAGAGTTTGTGCAGCGCTTCCGAGAGCAAGCCAACTCCAGAGAGGCCTTGCCTGTGCTGGCTTCCGCCTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
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| 3UTR GCA 90 bp | AGCACAGGCAAGGCCTCTCTGGAGTTGGCTTGCTCTCGGAAGCGCTaGACAAACTCTTTTTGGCTTTCCAAAAGGCTGAAGTTCCTCGCG | + |
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Preference number: 1 (lower is better) Translates to: STGKASLELACSRKR*TNSFWLSKRLKFLA Trigger: CGCGAGGAACTTCAGCCTTTTGGAAAGCCAAAAAGAGTTTGTGCAGCGCTTCCGAGAGCAAGCCAACTCCAGAGAGGCCTTGCCTGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
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| 3UTR CCA 90 bp | ATGAAGTTAATTTCCTGGCAGTGTCTGTGGGGTCCAGCCGAAACCTaGCAGCCAGTGATGCTCTGGACTGCGGCGATATGGAAACGACCA | + |
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Preference number: 1 (lower is better) Translates to: MKLISWQCLWGPAET*QPVMLWTAAIWKRP Trigger: TGGTCGTTTCCATATCGCCGCAGTCCAGAGCATCACTGGCTGCCAGGTTTCGGCTGGACCCCACAGACACTGCCAGGAAATTAACTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
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| 3UTR TCA 90 bp | AAGATGTCCATGGCCCCAGGCCAGTGGAAGAGTCTGGAACCTCAGTaGACCTACTTGGCTACTTCTGATCCTGCCTGCACTTTATGTGGG | + |
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Preference number: 1 (lower is better) Translates to: KMSMAPGQWKSLEPQ*TYLATSDPACTLCG Trigger: CCCACATAAAGTGCAGGCAGGATCAGAAGTAGCCAAGTAGGTTCACTGAGGTTCCAGACTCTTCCACTGGCCTGGGGCCATGGACATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| 3UTR GCA 90 bp | TGCCACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTaGTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: CHPALKNQQVVSCLY*SWSPISGICRSSCG Trigger: CCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATGAGCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
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| 3UTR CCA 90 bp | TCTCTGGAGTTGGCTTGCTCTCGGAAGCGCTGCACAAACTCTTTTTaGCTTTCCAAAAGGCTGAAGTTCCTCGCGAAGGCAGTATCAAAG | + |
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Preference number: 1 (lower is better) Translates to: SLELACSRKRCTNSF*LSKRLKFLAKAVSK Trigger: CTTTGATACTGCCTTCGCGAGGAACTTCAGCCTTTTGGAAAGCCAAAAAGAGTTTGTGCAGCGCTTCCGAGAGCAAGCCAACTCCAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGGCAGGGCTCACAAGATGTCCATGGCCCCAGGCCAGTGGAAGAGTCTGGCCTGATGCTCAGGCCTaGGCTGGGCTTCTCCACGGC | + |
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Preference number: 2 (lower is better) Translates to: QRAGLTRCPWPQASGRVWPDAQA*AGLLHG Trigger: GCCGTGGAGAAGCCCAGCTCAGGCCTGAGCATCAGG...CCAGACTCTTCCACTGGCCTGGGGCCATGGACATCTTGTGAGCCCTGCCCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGACATGGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACCCTTGCAGCCAGTGCTaGTACAGCTCCTGGACCCCC | + |
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Preference number: 2 (lower is better) Translates to: ARDMGHASPRTHVQPVPHPCSQC*YSSWTP Trigger: GGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGG...GTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCCATGTCTCTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR-3UTR GCA 90 bp | ACATGGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACCCACGTGCAGCCAGTaGCCCACTGGAGCACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: TWVTHLQGPTCSQCPTGAPTCSQ*PTGAQS Trigger: ACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGG...TGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCCATGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGGCAGGGCTCACAAGATGTCCATGGCCCCAGGCCAGTGGAAGAGTCTGGCAGCCAGTGCCCCACTaGAGCACAGAGTCCAACACA | + |
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Preference number: 2 (lower is better) Translates to: QRAGLTRCPWPQASGRVWQPVPH*STESNT Trigger: TGTGTTGGACTCTGTGCTCCAGTGGGGCACTGGCTG...CCAGACTCTTCCACTGGCCTGGGGCCATGGACATCTTGTGAGCCCTGCCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCCCAGGCCAGTGGAAGAGTCTGGAACCTCAGTGAACCTACTTGGCTACTTCCTCCAAGGACCCACGTaGAGCCAGTGCCCCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: GPRPVEESGTSVNLLGYFLQGPT*SQCPTG Trigger: TCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAG...GAAGTAGCCAAGTAGGTTCACTGAGGTTCCAGACTCTTCCACTGGCCTGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGGCAGGGCTCACAAGATGTCCATGGCCCCAGGCCAGTGGAAGAGTCTGGATAAAGGCTTGGTACTaGCAGACTGCCCAGAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: QRAGLTRCPWPQASGRVWIKAWY*QTAQSP Trigger: TGGGCTCTGGGCAGTCTGTCAGTACCAAGCCTTTAT...CCAGACTCTTCCACTGGCCTGGGGCCATGGACATCTTGTGAGCCCTGCCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCAAGGCCTCTCTGGAGTTGGCTTGCTCTCGGAAGCGCTGCACAAACTCTAAACCTGGCAGCCAGTaGTGCTCTGGACTGCGGCGA | + |
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Preference number: 2 (lower is better) Translates to: TGKASLELACSRKRCTNSKPGSQ*CSGLRR Trigger: TCGCCGCAGTCCAGAGCATCACTGGCTGCCAGGTTT...AGAGTTTGTGCAGCGCTTCCGAGAGCAAGCCAACTCCAGAGAGGCCTTGCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
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| 3UTR-3UTR GCA 90 bp | CACATCCTTGGAGCTCTCCTTGAATTGAGGGTCTCGGGCGTATCCTGTGGGCTTCTCCAAGGACCCACGTaGAGCCAGTGCCCCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: HILGALLELRVSGVSCGLLQGPT*SQCPTG Trigger: TCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAG...AAGCCCACAGGATACGCCCGAGACCCTCAATTCAAGGAGAGCTCCAAGGATGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATGAAACCCCTCACACTCAGACAACTACAGCCAGAGGGCAGGGCTCACAAGCCCACGTGCAGCCAGTaGCCCACTGGAGCACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: EMKPLTLRQLQPEGRAHKPTCSQ*PTGAQS Trigger: ACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGG...CTTGTGAGCCCTGCCCTCTGGCTGTAGTTGTCTGAGTGTGAGGGGTTTCATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| 3UTR CAA 90 bp | TGGGCAGGCGGAAGCCAGCACAGGCAAGGCCTCTCTGGAGTTGGCTaGCTCTCGGAAGCGCTGCACAAACTCTTTTTGGCTTTCCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: WAGGSQHRQGLSGVG*LSEALHKLFLAFQK Trigger: CTTTTGGAAAGCCAAAAAGAGTTTGTGCAGCGCTTCCGAGAGCAAGCCAACTCCAGAGAGGCCTTGCCTGTGCTGGCTTCCGCCTGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGGTCTCGGGCGTATCCAGTCTTTCCAGCTGCTaGAGGAGCTCGCTGCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: RVQHILGALLELRVSGVSSLSSC*RSSLPS Trigger: AGAGGGCAGCGAGCTCCTTCAGCAGCTGGAAAGACT...GGATACGCCCGAGACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR-3UTR CCA 90 bp | CATAGGCATAAAGGCTTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGACAGCCAGTGCCCCACTaGAGCACAGAGTCCAACACA | + |
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Preference number: 2 (lower is better) Translates to: HRHKGLVLTDCPEPKVLRQPVPH*STESNT Trigger: TGTGTTGGACTCTGTGCTCCAGTGGGGCACTGGCTG...TCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAAGCCTTTATGCCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTGAGCACACACCAGAAAAAGTGAACTATGTGGGGAACCGGCTTGTCCCCATGGCCCCAGGCCAGTaGAAGAGTCTGGAACCTCAG | + |
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Preference number: 2 (lower is better) Translates to: ASEHTPEKVNYVGNRLVPMAPGQ*KSLEPQ Trigger: CTGAGGTTCCAGACTCTTCCACTGGCCTGGGGCCAT...GGGGACAAGCCGGTTCCCCACATAGTTCACTTTTTCTGGTGTGTGCTCAGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
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| 3UTR-3UTR CCA 90 bp | GAATGTCCCTGGCACCAGAGAAGGTCATTTATTAAGGGCCCTCCTTCCATCCACCTCCTGGCCTTACAGTaGGGGCTTCTGAGCACACAC | + |
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Preference number: 2 (lower is better) Translates to: ECPWHQRRSFIKGPPSIHLLALQ*GLLSTH Trigger: GTGTGTGCTCAGAAGCCCCCACTGTAAGGCCAGGAG...GTGGATGGAAGGAGGGCCCTTAATAAATGACCTTCTCTGGTGCCAGGGACATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
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| 3UTR CAA 90 bp | GGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTaGAAAGGCCCAGTGTGGTACCAGACACACAGTGGATCCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GSRDISWGLRRVNKT*KGPVWYQTHSGSFQ Trigger: CTGGAAGGATCCACTGTGTGTCTGGTACCACACTGGGCCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCCTATGTGTTACAGCTTTGGGGATTAGCCATAGAAATGAAACCCCTCACTCTCCTTGCAGCCAGTaGTGGTACAGCTCCTGGACC | + |
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Preference number: 2 (lower is better) Translates to: PALCVTALGISHRNETPHSPCSQ*WYSSWT Trigger: GGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGA...GTGAGGGGTTTCATTTCTATGGCTAATCCCCAAAGCTGTAACACATAGGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR-3UTR CCA 90 bp | AATTCCCCAGCATATTCTTCCCTGCAGAGAGGATGCAGTCCGTGCGTTCACAGGTGCCTGCACTTTATGTaGGCTGCAGGCAACATTACC | + |
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Preference number: 2 (lower is better) Translates to: NSPAYSSLQRGCSPCVHRCLHFM*AAGNIT Trigger: GGTAATGTTGCCTGCAGCCCACATAAAGTGCAGGCA...CCTGTGAACGCACGGACTGCATCCTCTCTGCAGGGAAGAATATGCTGGGGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
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| 3UTR-3UTR CCA 90 bp | CATAAAGGCTTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGAACAGTTTGCCTGCACTTTATGTaGGCTGCAGGCAACATTACC | + |
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Preference number: 2 (lower is better) Translates to: HKGLVLTDCPEPKVLRTVCLHFM*AAGNIT Trigger: GGTAATGTTGCCTGCAGCCCACATAAAGTGCAGGCA...AACTGTTCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAAGCCTTTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| 3UTR-3UTR TCA 90 bp | CACAAACTCTTTTTGGCTTTCCAAAAGGCTGAAGTTCCTCGCGAAGGCAGTATCTTCCGCAGTTCCTCGTaGCTCTGCTGGGTGATGAGT | + |
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Preference number: 2 (lower is better) Translates to: HKLFLAFQKAEVPREGSIFRSSS*LCWVMS Trigger: ACTCATCACCCAGCAGAGTCACGAGGAACTGCGGAA...GATACTGCCTTCGCGAGGAACTTCAGCCTTTTGGAAAGCCAAAAAGAGTTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTGGCTTTCCAAAAGGCTGAAGTTCCTCGCGAAGGCAGTATCAAAGACAAAGCAGCCAGTGATGCTCTaGACTGCGGCGATATGGAAA | + |
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Preference number: 2 (lower is better) Translates to: FWLSKRLKFLAKAVSKTKQPVML*TAAIWK Trigger: TTTCCATATCGCCGCAGTCCAGAGCATCACTGGCTG...CTTTGTCTTTGATACTGCCTTCGCGAGGAACTTCAGCCTTTTGGAAAGCCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
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| 3UTR GCA 72 bp | GGAGGCCCTCTGCAGGGAGCGAGCGCGCTTCCAGCCTaGTGTGGAGCCACCACAGCCGCAGGTTCGGGCACT | + |
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Preference number: 3 (lower is better) Translates to: GGPLQGASALPA*CGATTAAGSGT Trigger: AGTGCCCGAACCTGCGGCTGTGGTGGCTCCACAGCAGGCTGGAAGCGCGCTCGCTCCCTGCAGAGGGCCTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
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| 3UTR CCA 72 bp | CCCTCTGCAGGGAGCGAGCGCGCTTCCAGCCTGCTGTaGAGCCACCACAGCCGCAGGTTCGGGCACTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: PSAGSERASSLL*SHHSRRFGHSW Trigger: CCAGGAGTGCCCGAACCTGCGGCTGTGGTGGCTCCACAGCAGGCTGGAAGCGCGCTCGCTCCCTGCAGAGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
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| 3UTR GCA 72 bp | TGCAGCAGGCGGCTGGCCCGCTCTGAGTCCTCTCCTTaGAGCCAGTGCTGGTACAGCTCCTGGACCCCCGGT | + |
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Preference number: 3 (lower is better) Translates to: CSRRLARSESSP*SQCWYSSWTPG Trigger: ACCGGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGAGGACTCAGAGCGGGCCAGCCGCCTGCTGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR GCA 72 bp | CGGCTGGCCCGCTCTGAGTCCTCTCCTTGCAGCCAGTaGTGGTACAGCTCCTGGACCCCCGGTGCATCTTCG | + |
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Preference number: 3 (lower is better) Translates to: RLARSESSPCSQ*WYSSWTPGASS Trigger: CGAAGATGCACCGGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGAGGACTCAGAGCGGGCCAGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
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| 3UTR CCA 72 bp | CTGGCCCGCTCTGAGTCCTCTCCTTGCAGCCAGTGCTaGTACAGCTCCTGGACCCCCGGTGCATCTTCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LARSESSPCSQC*YSSWTPGASSG Trigger: GCCCGAAGATGCACCGGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGAGGACTCAGAGCGGGCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
||
| 3UTR CCA 72 bp | GAGTCCTCTCCTTGCAGCCAGTGCTGGTACAGCTCCTaGACCCCCGGTGCATCTTCGGGCGCCTCAGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ESSPCSQCWYSS*TPGASSGASVL Trigger: GAGGACTGAGGCGCCCGAAGATGCACCGGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGAGGACTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
||
| 3UTR GCA 72 bp | CCCCCGGTGCATCTTCGGGCGCCTCAGTCCTCACCATaGTGTACAGTCTTTCCAGCTGCTGAAGGAGCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: PPVHLRAPQSSP*CTVFPAAEGAR Trigger: GCGAGCTCCTTCAGCAGCTGGAAAGACTGTACAGCATGGTGAGGACTGAGGCGCCCGAAGATGCACCGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
||
| 3UTR GCA 72 bp | TTGCAGCCAGTGCTGGTACAGCTCCTGGACCCCCGGTaGATCTTCGGGCGCCTCAGTCCTCACCATGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LQPVLVQLLDPR*IFGRLSPHHAV Trigger: TACAGCATGGTGAGGACTGAGGCGCCCGAAGATGCACCGGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
||
| 3UTR CCA 72 bp | CTGGGCAGGCGGAAGCCAGCACAGGCAAGGCCTCTCTaGAGTTGGCTTGCTCTCGGAAGCGCTGCACAAACT | + |
|
Preference number: 3 (lower is better) Translates to: LGRRKPAQARPL*SWLALGSAAQT Trigger: AGTTTGTGCAGCGCTTCCGAGAGCAAGCCAACTCCAGAGAGGCCTTGCCTGTGCTGGCTTCCGCCTGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| 3UTR CCA 72 bp | TCTCCACGGCATGGTATTGTGTGTGCAGCAGGCGGCTaGCCCGCTCTGAGTCCTCTCCTTGCAGCCAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SPRHGIVCAAGG*PALSPLLAASA Trigger: AGCACTGGCTGCAAGGAGAGGACTCAGAGCGGGCCAGCCGCCTGCTGCACACACAATACCATGCCGTGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
||
| 3UTR TCA 72 bp | ATGGTATTGTGTGTGCAGCAGGCGGCTGGCCCGCTCTaGGTCCTCTCCTTGCAGCCAGTGCTGGTACAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: MVLCVQQAAGPL*VLSLQPVLVQL Trigger: GAGCTGTACCAGCACTGGCTGCAAGGAGAGGACTCAGAGCGGGCCAGCCGCCTGCTGCACACACAATACCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
||
| 3UTR TCA 72 bp | AGTGTCTGTGGGGTCCAGCCGAAACCTGGCAGCCAGTaGTGCTCTGGACTGCGGCGATATGGAAACGACCAC | + |
|
Preference number: 3 (lower is better) Translates to: SVCGVQPKPGSQ*CSGLRRYGNDH Trigger: GTGGTCGTTTCCATATCGCCGCAGTCCAGAGCATCACTGGCTGCCAGGTTTCGGCTGGACCCCACAGACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| 3UTR GCA 72 bp | CTGGCCAGCCCCACAATTCCCCAGCATATTCTTCCCTaGAGAGAGGATGCAGTCCGTGCGTTCACAGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LASPTIPQHILP*REDAVRAFTGQ Trigger: CTGGCCTGTGAACGCACGGACTGCATCCTCTCTGCAGGGAAGAATATGCTGGGGAATTGTGGGGCTGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| 3UTR CCA 72 bp | ATTTCCTGGCAGTGTCTGTGGGGTCCAGCCGAAACCTaGCAGCCAGTGATGCTCTGGACTGCGGCGATATGG | + |
|
Preference number: 3 (lower is better) Translates to: ISWQCLWGPAET*QPVMLWTAAIW Trigger: CCATATCGCCGCAGTCCAGAGCATCACTGGCTGCCAGGTTTCGGCTGGACCCCACAGACACTGCCAGGAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| 3UTR CCA 72 bp | AACTACAGCCAGAGGGCAGGGCTCACAAGATGTCCATaGCCCCAGGCCAGTGGAAGAGTCTGGAACCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: NYSQRAGLTRCP*PQASGRVWNLS Trigger: ACTGAGGTTCCAGACTCTTCCACTGGCCTGGGGCCATGGACATCTTGTGAGCCCTGCCCTCTGGCTGTAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCAACACGTATCCTGTGGGCTTaGTTTCAGATACCCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: HLQGPTCSQCPTGAQSPTRILWA*FQIPTQ Trigger: CTGTGTGGGTATCTGAAACAAAGCCCACAGGATACG...TGTTGGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| 3UTR CCA 72 bp | AGGCGGAAGCCAGCACAGGCAAGGCCTCTCTGGAGTTaGCTTGCTCTCGGAAGCGCTGCACAAACTCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RRKPAQARPLWS*LALGSAAQTLF Trigger: AAAAAGAGTTTGTGCAGCGCTTCCGAGAGCAAGCCAACTCCAGAGAGGCCTTGCCTGTGCTGGCTTCCGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| 3UTR TCA 72 bp | ATGGCCCCAGGCCAGTGGAAGAGTCTGGAACCTCAGTaGACCTACTTGGCTACTTCTGATCCTGCCTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: MAPGQWKSLEPQ*TYLATSDPACT Trigger: AGTGCAGGCAGGATCAGAAGTAGCCAAGTAGGTTCACTGAGGTTCCAGACTCTTCCACTGGCCTGGGGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| 3UTR TCA 72 bp | CTTTGTTTCAGATACCCACACAGTCTAGTCTTTCCGTaGGTCTTGGTGCTGGCCCCGGGGGTCTCACAGACT | + |
|
Preference number: 3 (lower is better) Translates to: LCFRYPHSLVFP*VLVLAPGVSQT Trigger: AGTCTGTGAGACCCCCGGGGCCAGCACCAAGACTCACGGAAAGACTAGACTGTGTGGGTATCTGAAACAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCCCCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGCGTATCCTGTGGGCTTaGTTTCAGATACCCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: SAPLEHRVQHILGALLELRILWA*FQIPTQ Trigger: CTGTGTGGGTATCTGAAACAAAGCCCACAGGATACG...CAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGGGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGGTCCGTATCCTGTGGGCTTaGTTTCAGATACCCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: PLEHRVQHILGALLELRVRILWA*FQIPTQ Trigger: CTGTGTGGGTATCTGAAACAAAGCCCACAGGATACG...GACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| 3UTR TCA 72 bp | ACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTaGGGGTCTCGGGCGTATCCTGTGGGCTTTGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TESNTSLELSLN*GSRAYPVGFVS Trigger: TGAAACAAAGCCCACAGGATACGCCCGAGACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| 3UTR GCA 72 bp | AAGGCCTCTCTGGAGTTGGCTTGCTCTCGGAAGCGCTaGACAAACTCTTTTTGGCTTTCCAAAAGGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KASLELACSRKR*TNSFWLSKRLK Trigger: CTTCAGCCTTTTGGAAAGCCAAAAAGAGTTTGTGCAGCGCTTCCGAGAGCAAGCCAACTCCAGAGAGGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| 3UTR TCA 72 bp | TCCTTATTAGCATCTAGAACCTTCCGCAGTTCCTCGTaGCTCTGCTGGGTGATGAGTACTGTCTCTGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLLASRTFRSSS*LCWVMSTVSAE Trigger: CTCAGCAGAGACAGTACTCATCACCCAGCAGAGTCACGAGGAACTGCGGAAGGTTCTAGATGCTAATAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| 3UTR GCA 72 bp | GCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTaGTCATGGAGCCCTATAAGTGGGATCTGTAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ALKNQQVVSCLY*SWSPISGICRS Trigger: GCTCCTACAGATCCCACTTATAGGGCTCCATGAGCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| 3UTR TCA 72 bp | AGCGCTGCACAAACTCTTTTTGGCTTTCCAAAAGGCTaGAGTTCCTCGCGAAGGCAGTATCAAAGACAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SAAQTLFGFPKG*SSSRRQYQRQS Trigger: ACTTTGTCTTTGATACTGCCTTCGCGAGGAACTTCAGCCTTTTGGAAAGCCAAAAAGAGTTTGTGCAGCGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGCGAGCGCGCTTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTTCGGGGCATGGTATTGTGTGTaGAGCAGGCGGCTGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GSERASSLLWSHHSRRFGAWYCV*SRRLAR Trigger: GCGGGCCAGCCGCCTGCTGCACACACAATACCATGC...CCCGAACCTGCGGCTGTGGTGGCTCCACAGCAGGCTGGAAGCGCGCTCGCTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS-3UTR TCA 90 bp | GGGAGCGAGCGCGCTTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTTCGGGAGTCTTTCCAGCTGCTaGAGGAGCTCGCTGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSERASSLLWSHHSRRFGSLSSC*RSSLPS Trigger: AGAGGGCAGCGAGCTCCTTCAGCAGCTGGAAAGACT...CCCGAACCTGCGGCTGTGGTGGCTCCACAGCAGGCTGGAAGCGCGCTCGCTCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS-3UTR TCA 90 bp | ACATGGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACTCCAGGTAGCCTCCTaGGCCTCCGCCCCGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TWVTHLQGPTCSQCPTGALQVAS*ASAPMA Trigger: AGCCATCGGGGCGGAGGCTCAGGAGGCTACCTGGAG...TGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCCATGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTTCGGGCACTCCTGGCCTTACCTGATGCTCAGGCCTaGGCTGGGCTTCTCCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQPAVEPPQPQVRALLALPDAQA*AGLLHG Trigger: GCCGTGGAGAAGCCCAGCTCAGGCCTGAGCATCAGG...TAAGGCCAGGAGTGCCCGAACCTGCGGCTGTGGTGGCTCCACAGCAGGCTGGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS-3UTR TCA 90 bp | CACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCCCTGATGCTCAGGCCTaGGCTGGGCTTCTCCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: HASPRTHVQPVPHWSTESPDAQA*AGLLHG Trigger: GCCGTGGAGAAGCCCAGCTCAGGCCTGAGCATCAGG...GGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGACTCCGCCCCGATGGCTaGTGGGCTCCTCAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GSRISKDPRAASAPLEHRLRPDG*WAPQQT Trigger: TGTCTGCTGAGGAGCCCAGCAGCCATCGGGGCGGAG...TCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACTCCGCCCCGATGGCTaGTGGGCTCCTCAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: TWVTHLQGPTCSQCPTGALRPDG*WAPQQT Trigger: TGTCTGCTGAGGAGCCCAGCAGCCATCGGGGCGGAG...TGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCCATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR GCA 90 bp | CACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCGCATGGTATTGTGTGTaGAGCAGGCGGCTGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HASPRTHVQPVPHWSTESAWYCV*SRRLAR Trigger: GCGGGCCAGCCGCCTGCTGCACACACAATACCATGC...GGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCGAGCGCGCTTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTTCGGGCGCCTTCTCCAGCTTCTaGGTTCTTCCGTCTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GASALPACCGATTAAGSGAFSSF*VLPSWF Trigger: GAACCAAGACGGAAGAACCCAGAAGCTGGAGAAGGC...GCCCGAACCTGCGGCTGTGGTGGCTCCACAGCAGGCTGGAAGCGCGCTCGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS-3UTR TCA 90 bp | CACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCAAACCTGGCAGCCAGTaGTGCTCTGGACTGCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HASPRTHVQPVPHWSTESKPGSQ*CSGLRR Trigger: TCGCCGCAGTCCAGAGCATCACTGGCTGCCAGGTTT...GGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGACATGGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACAGGGAGCCCATAACCTaGTGTGGGGACCGGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ARDMGHASPRTHVQPVPHREPIT*CGDRAV Trigger: TACAGCCCGGTCCCCACAGCAGGTTATGGGCTCCCT...GTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCCATGTCTCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | TTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTTCGGGCACTCCTGGCCTTATGCTCAGGCCTGAGCTaGGCTTCTCCACGGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FQPAVEPPQPQVRALLALCSGLS*ASPRHG Trigger: ACCATGCCGTGGAGAAGCCCAGCTCAGGCCTGAGCA...TAAGGCCAGGAGTGCCCGAACCTGCGGCTGTGGTGGCTCCACAGCAGGCTGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS-3UTR CCA 90 bp | CACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCTGCTCAGGCCTGAGCTaGGCTTCTCCACGGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HASPRTHVQPVPHWSTESCSGLS*ASPRHG Trigger: ACCATGCCGTGGAGAAGCCCAGCTCAGGCCTGAGCA...GGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGCAGGGCTCACAAGATGTCCATGGCCCCAGGCCAGTGGAAGAGTCTGGAGGGAGCCCATAACCTaGTGTGGGGACCGGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QRAGLTRCPWPQASGRVWREPIT*CGDRAV Trigger: TACAGCCCGGTCCCCACAGCAGGTTATGGGCTCCCT...CCAGACTCTTCCACTGGCCTGGGGCCATGGACATCTTGTGAGCCCTGCCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCAAGGGAGCCCATAACCTaGTGTGGGGACCGGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TWVTHLQGPTCSQCPTGAREPIT*CGDRAV Trigger: TACAGCCCGGTCCCCACAGCAGGTTATGGGCTCCCT...TGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCCATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGCGAGCGCGCTTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTTCGGGCAGAAGCTGCTGTTGTaGGAAGAAGTCTTTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSERASSLLWSHHSRRFGQKLLL*EEVFDQ Trigger: CTGGTCAAAGACTTCTTCGCACAACAGCAGCTTCTG...CCCGAACCTGCGGCTGTGGTGGCTCCACAGCAGGCTGGAAGCGCGCTCGCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGCAGGGCTCACAAGATGTCCATGGCCCCAGGCCAGTGGAAGAGTCTGGAGAGGGGCGGGTCAGTaGAGGAGGCGCAACACAACT | + |
|
Preference number: 4 (lower is better) Translates to: QRAGLTRCPWPQASGRVWRGAGQ*RRRNTT Trigger: AGTTGTGTTGCGCCTCCTGCACTGACCCGCCCCTCT...CCAGACTCTTCCACTGGCCTGGGGCCATGGACATCTTGTGAGCCCTGCCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGCAGGGCTCACAAGATGTCCATGGCCCCAGGCCAGTGGAAGAGTCTGGGAGTACTGTCTCTGCTaGGGTGACACAGCCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRAGLTRCPWPQASGRVWEYCLC*GDTAAA Trigger: TGCAGCGGCTGTGTCACCTCAGCAGAGACAGTACTC...CCAGACTCTTCCACTGGCCTGGGGCCATGGACATCTTGTGAGCCCTGCCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR TCA 90 bp | CACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCTTCCGCAGTTCCTCGTaGCTCTGCTGGGTGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HASPRTHVQPVPHWSTESFRSSS*LCWVMS Trigger: ACTCATCACCCAGCAGAGTCACGAGGAACTGCGGAA...GGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCAACACAAAACCTGGCAGCCAGTaGTGCTCTGGACTGCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SPRTHVQPVPHWSTESNTKPGSQ*CSGLRR Trigger: TCGCCGCAGTCCAGAGCATCACTGGCTGCCAGGTTT...TGTGTTGGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR GCA 90 bp | CACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCCCGCTGCTGACCAGGTaGTGCCTCCTTATTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: HASPRTHVQPVPHWSTESPLLTR*CLLISI Trigger: GATGCTAATAAGGAGGCAGCACCTGGTCAGCAGCGG...GGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCATCTCCTTGCAGCCAGTaGTGGTACAGCTCCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TWVTHLQGPTCSQCPTGASPCSQ*WYSSWT Trigger: GGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGA...TGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCCATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
||
| CDS-3UTR CCA 90 bp | CCCCGGGGGTCTCACAGACTCAAGGCCTCCTACCACCTGATGCTCAGGCCTGAGCATTCAGGGAGACCTTaGCCTTCTCCAGCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRGSHRLKASYHLMLRPEHSGRP*PSPASG Trigger: CCCAGAAGCTGGAGAAGGCCAAGGTCTCCCTGAATG...CTCAGGCCTGAGCATCAGGTGGTAGGAGGCCTTGAGTCTGTGAGACCCCCGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | CTTGCAGCCAGTGCTGGTACAGCTCCTGGACCCCCGGTGCATCTTCGGGCGCCTCGGGTCTGGTACTCCTaGTTGAAGAAGTCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAASAGTAPGPPVHLRAPRVWYS*LKKSGL Trigger: CAGACCTGACTTCTTCAACCAGGAGTACCAGACCCG...AGGCGCCCGAAGATGCACCGGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAGGCCAGTGGAAGAGTCTGGAACCTCAGTGAACCTACTTGGCTACTTCCGCCCCGATGGCTGCTaGGCTCCTCAGCAGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: GPRPVEESGTSVNLLGYFRPDGC*APQQTH Trigger: GTGTGTCTGCTGAGGAGCCCAGCAGCCATCGGGGCG...GAAGTAGCCAAGTAGGTTCACTGAGGTTCCAGACTCTTCCACTGGCCTGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | GGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGGCTTCTCCACGGCATaGTATTGTGTGTGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRISKDPRAASAPLEHRGFSTA*YCVCSR Trigger: CCTGCTGCACACACAATACCATGCCGTGGAGAAGCC...TCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
||
| CDS-3UTR CCA 90 bp | GTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTACACACTACTGGTTCTaGGAGAGGGGCGGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTHLQGPTCSQCPTGAQSTHYWF*ERGGSV Trigger: CACTGACCCGCCCCTCTCCCAGAACCAGTAGTGTGT...ACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR TCA 90 bp | TCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCAACACAGAGTACTGTCTCTGCTaGGGTGACACAGCCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPRTHVQPVPHWSTESNTEYCLC*GDTAAA Trigger: TGCAGCGGCTGTGTCACCTCAGCAGAGACAGTACTC...TGTGTTGGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR TCA 90 bp | ACATGGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCATTCCGCAGTTCCTCGTaGCTCTGCTGGGTGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TWVTHLQGPTCSQCPTGAFRSSS*LCWVMS Trigger: ACTCATCACCCAGCAGAGTCACGAGGAACTGCGGAA...TGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCCATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR TCA 90 bp | AGCCATAGAAATGAAACCCCTCACACTCAGACAACTACAGCCAGAGGGCAGGGCCTCCAGGTAGCCTCCTaGGCCTCCGCCCCGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHRNETPHTQTTTARGQGLQVAS*ASAPMA Trigger: AGCCATCGGGGCGGAGGCTCAGGAGGCTACCTGGAG...GCCCTGCCCTCTGGCTGTAGTTGTCTGAGTGTGAGGGGTTTCATTTCTATGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTTTCCGTGAGTCTTGGTGCTGGCCCCGGGGGTCTCACAGACTCAAGGCCTAGTCTTTCCAGCTGCTaGAGGAGCTCGCTGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSVSLGAGPGGLTDSRPSLSSC*RSSLPS Trigger: AGAGGGCAGCGAGCTCCTTCAGCAGCTGGAAAGACT...AGGCCTTGAGTCTGTGAGACCCCCGGGGCCAGCACCAAGACTCACGGAAAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
||
| CDS-3UTR GCA 90 bp | GTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCGCTGCTGACCAGGTaGTGCCTCCTTATTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VTHLQGPTCSQCPTGAQSPLLTR*CLLISI Trigger: GATGCTAATAAGGAGGCAGCACCTGGTCAGCAGCGG...ACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGCAGGGCTCACAAGATGTCCATGGCCCCAGGCCAGTGGAAGAGTCTGGAAAGAGCTCTTGGGCTaGGTGCCGGAACACATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRAGLTRCPWPQASGRVWKELLG*VPEHML Trigger: GAGCATGTGTTCCGGCACGCAGCCCAAGAGCTCTTT...CCAGACTCTTCCACTGGCCTGGGGCCATGGACATCTTGTGAGCCCTGCCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | CCCCGGGGGTCTCACAGACTCAAGGCCTCCTACCACCTGATGCTCAGGCCTGAGGCCTTCTCCAGCTTCTaGGTTCTTCCGTCTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRGSHRLKASYHLMLRPEAFSSF*VLPSWF Trigger: GAACCAAGACGGAAGAACCCAGAAGCTGGAGAAGGC...CTCAGGCCTGAGCATCAGGTGGTAGGAGGCCTTGAGTCTGTGAGACCCCCGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | CACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCCAGCCAGTGATGCTCTaGACTGCGGCGATATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HASPRTHVQPVPHWSTESQPVML*TAAIWK Trigger: TTTCCATATCGCCGCAGTCCAGAGCATCACTGGCTG...GGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGACATGGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACCGGGTCTGGTACTCCTaGTTGAAGAAGTCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARDMGHASPRTHVQPVPHRVWYS*LKKSGL Trigger: CAGACCTGACTTCTTCAACCAGGAGTACCAGACCCG...GTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCCATGTCTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | GTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTGGCTTCTCCACGGCATaGTATTGTGTGTGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTHLQGPTCSQCPTGAQSGFSTA*YCVCSR Trigger: CCTGCTGCACACACAATACCATGCCGTGGAGAAGCC...ACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
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| CDS-3UTR TCA 90 bp | CACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCCCACCTTTACAGGCTTaGTGCAATTCTGAGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HASPRTHVQPVPHWSTESPPLQA*CNSEMA Trigger: GGCCATCTCAGAATTGCATCAAGCCTGTAAAGGTGG...GGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR TCA 90 bp | CCAGTGCCCCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATCTGTCTCTGCTGAGGTaGCACAGCCGCTGCACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVPHWSTESNTSLELSLNLSLLR*HSRCTP Trigger: TGGCGTGCAGCGGCTGTGTCACCTCAGCAGAGACAG...ATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGGGGCACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR GCA 90 bp | CATAGGCATAAAGGCTTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGACTCCGCCCCGATGGCTaGTGGGCTCCTCAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HRHKGLVLTDCPEPKVLRLRPDG*WAPQQT Trigger: TGTCTGCTGAGGAGCCCAGCAGCCATCGGGGCGGAG...TCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAAGCCTTTATGCCTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | CATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCAACACATTCAGGGAGACCTTaGCCTTCTCCAGCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLQGPTCSQCPTGAQSPTHSGRP*PSPASG Trigger: CCCAGAAGCTGGAGAAGGCCAAGGTCTCCCTGAATG...TGTTGGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | AATTCCCCAGCATATTCTTCCCTGCAGAGAGGATGCAGTCCGTGCGTTCACAGGCGCCCCGATGGCTGCTaGGCTCCTCAGCAGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: NSPAYSSLQRGCSPCVHRRPDGC*APQQTH Trigger: GTGTGTCTGCTGAGGAGCCCAGCAGCCATCGGGGCG...CCTGTGAACGCACGGACTGCATCCTCTCTGCAGGGAAGAATATGCTGGGGAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
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| CDS-3UTR CCA 90 bp | GGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTGACTTCAGCCACGTaGATTCCAAAGAGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRISKDPRAASAPLEHRVTSAT*IPKSSW Trigger: CCAAGAGCTCTTTGGAATCCACGTGGCTGAAGTCAC...TCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | GCCCCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGCCTTGCAGCCAGTGCTaGTACAGCTCCTGGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: APLEHRVQHILGALLELRPCSQC*YSSWTP Trigger: GGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGG...CCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
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| CDS-3UTR TCA 90 bp | CAGAGGGCAGGGCTCACAAGATGTCCATGGCCCCAGGCCAGTGGAAGAGTCTGGCCACCTTTACAGGCTTaGTGCAATTCTGAGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRAGLTRCPWPQASGRVWPPLQA*CNSEMA Trigger: GGCCATCTCAGAATTGCATCAAGCCTGTAAAGGTGG...CCAGACTCTTCCACTGGCCTGGGGCCATGGACATCTTGTGAGCCCTGCCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR GCA 90 bp | CACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCTCAGGAGTCAGAAGCTaGTGTTGTGCGAAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HASPRTHVQPVPHWSTESSGVRS*CCAKKS Trigger: AGACTTCTTCGCACAACAGCAGCTTCTGACTCCTGA...GGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR GCA 90 bp | GGCCCCAGGCCAGTGGAAGAGTCTGGAACCTCAGTGAACCTACTTGGCTACTTCTCTCCTTGCAGCCAGTaGTGGTACAGCTCCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GPRPVEESGTSVNLLGYFSPCSQ*WYSSWT Trigger: GGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGA...GAAGTAGCCAAGTAGGTTCACTGAGGTTCCAGACTCTTCCACTGGCCTGGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
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| CDS-3UTR CCA 90 bp | CATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCAACACGGGTCTGGTACTCCTaGTTGAAGAAGTCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLQGPTCSQCPTGAQSPTRVWYS*LKKSGL Trigger: CAGACCTGACTTCTTCAACCAGGAGTACCAGACCCG...TGTTGGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGGCAGGGCTCACAAGATGTCCATGGCCCCAGGCCAGTGGAAGAGTCTGGTCCACATCACGGGTCTaGTACTCCTGGTTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRAGLTRCPWPQASGRVWSTSRV*YSWLKK Trigger: CTTCTTCAACCAGGAGTACCAGACCCGTGATGTGGA...CCAGACTCTTCCACTGGCCTGGGGCCATGGACATCTTGTGAGCCCTGCCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | CACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCTCCAGTGTCACTTCCTaGAAGTCCTTGTTCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HASPRTHVQPVPHWSTESSSVTS*KSLFLK Trigger: CTTGAGGAACAAGGACTTCCAGGAAGTGACACTGGA...GGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | AGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGGTCTCGGGCGTATCCCCTTGCAGCCAGTGCTaGTACAGCTCCTGGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVQHILGALLELRVSGVSPCSQC*YSSWTP Trigger: GGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGG...GGATACGCCCGAGACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
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| CDS-3UTR CCA 90 bp | ACAGGCAAGGCCTCTCTGGAGTTGGCTTGCTCTCGGAAGCGCTGCACAAACTCTGCCTTCTCCAGCTTCTaGGTTCTTCCGTCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGKASLELACSRKRCTNSAFSSF*VLPSWR Trigger: CCTCCAGGACGGAAGAACCCAGAAGCTGGAGAAGGC...AGAGTTTGTGCAGCGCTTCCGAGAGCAAGCCAACTCCAGAGAGGCCTTGCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
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| CDS-3UTR TCA 90 bp | GAAATGAAACCCCTCACACTCAGACAACTACAGCCAGAGGGCAGGGCTCACAAGAAACCTGGCAGCCAGTaGTGCTCTGGACTGCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EMKPLTLRQLQPEGRAHKKPGSQ*CSGLRR Trigger: TCGCCGCAGTCCAGAGCATCACTGGCTGCCAGGTTT...CTTGTGAGCCCTGCCCTCTGGCTGTAGTTGTCTGAGTGTGAGGGGTTTCATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR GCA 90 bp | GTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCAGAAGCTGCTGTTGTaGGAAGAAGTCTTTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTHLQGPTCSQCPTGAQSQKLLL*EEVFDQ Trigger: CTGGTCAAAGACTTCTTCGCACAACAGCAGCTTCTG...ACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR GCA 90 bp | CATAGGCATAAAGGCTTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGAAGAGGGGCGGGTCAGTaGAGGAGGCGCAACACAACT | + |
|
Preference number: 4 (lower is better) Translates to: HRHKGLVLTDCPEPKVLRRGAGQ*RRRNTT Trigger: AGTTGTGTTGCGCCTCCTGCACTGACCCGCCCCTCT...TCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAAGCCTTTATGCCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | CATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCAACAGGCTATGCCACTTCCTaGCTTCTTAGCCACCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HLQGPTCSQCPTGAQSPTGYATS*LLSHLY Trigger: GTAAAGGTGGCTAAGAAGCCAGGAAGTGGCATAGCC...TGTTGGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | CATAGGCATAAAGGCTTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGAATAGCAGATCCAGCCTaGGCAGGCGGAAGCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HRHKGLVLTDCPEPKVLRIADPA*AGGSQH Trigger: GTGCTGGCTTCCGCCTGCCCAGGCTGGATCTGCTAT...TCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAAGCCTTTATGCCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | AGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGGTCTCGGGCGTATCCATAGCAGATCCAGCCTaGGCAGGCGGAAGCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RVQHILGALLELRVSGVSIADPA*AGGSQH Trigger: GTGCTGGCTTCCGCCTGCCCAGGCTGGATCTGCTAT...GGATACGCCCGAGACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR TCA 90 bp | GACTGCCCAGAGCCCAAGGTCCTGAGAACAGTTTTTAGAAGCCTGGGTGCCTCAGGCTTTCCAAAAGGCTaGAGTTCCTCGCGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DCPEPKVLRTVFRSLGASGFPKG*SSSRRQ Trigger: CTGCCTTCGCGAGGAACTTCAGCCTTTTGGAAAGCC...TGAGGCACCCAGGCTTCTAAAAACTGTTCTCAGGACCTTGGGCTCTGGGCAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR TCA 90 bp | CACATCCTTGGAGCTCTCCTTGAATTGAGGGTCTCGGGCGTATCCTGTGGGCTTGGCTTTCCAAAAGGCTaGAGTTCCTCGCGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HILGALLELRVSGVSCGLGFPKG*SSSRRQ Trigger: CTGCCTTCGCGAGGAACTTCAGCCTTTTGGAAAGCC...AAGCCCACAGGATACGCCCGAGACCCTCAATTCAAGGAGAGCTCCAAGGATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR TCA 90 bp | GCCCCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGGGCTTTCCAAAAGGCTaGAGTTCCTCGCGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: APLEHRVQHILGALLELRGFPKG*SSSRRQ Trigger: CTGCCTTCGCGAGGAACTTCAGCCTTTTGGAAAGCC...CCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | GTGATGAGTACTGTCTCTGCTGAGGTGACACAGCCGCTGCACGCCAGGCAGTCAGGCTATGCCACTTCCTaGCTTCTTAGCCACCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VMSTVSAEVTQPLHARQSGYATS*LLSHLY Trigger: GTAAAGGTGGCTAAGAAGCCAGGAAGTGGCATAGCC...TGACTGCCTGGCGTGCAGCGGCTGTGTCACCTCAGCAGAGACAGTACTCATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCCCCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGACACACTACTGGTTCTaGGAGAGGGGCGGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SAPLEHRVQHILGALLELTHYWF*ERGGSV Trigger: CACTGACCCGCCCCTCTCCCAGAACCAGTAGTGTGT...CAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGGGGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR GCA 90 bp | GAAATGAAACCCCTCACACTCAGACAACTACAGCCAGAGGGCAGGGCTCACAAGAAAGAGCTCTTGGGCTaGGTGCCGGAACACATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EMKPLTLRQLQPEGRAHKKELLG*VPEHML Trigger: GAGCATGTGTTCCGGCACGCAGCCCAAGAGCTCTTT...CTTGTGAGCCCTGCCCTCTGGCTGTAGTTGTCTGAGTGTGAGGGGTTTCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR GCA 90 bp | AGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGGTCTCGGGCGTATCCTCTGAGTCCTCTCCTTaGAGCCAGTGCTGGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVQHILGALLELRVSGVSSESSP*SQCWYS Trigger: GCTGTACCAGCACTGGCTGCAAGGAGAGGACTCAGA...GGATACGCCCGAGACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCCCCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGTCTGAGTCCTCTCCTTaGAGCCAGTGCTGGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPLEHRVQHILGALLELSESSP*SQCWYS Trigger: GCTGTACCAGCACTGGCTGCAAGGAGAGGACTCAGA...CAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGGGGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
||
| CDS-3UTR CCA 90 bp | GAAATGAAACCCCTCACACTCAGACAACTACAGCCAGAGGGCAGGGCTCACAAGCATTCAGGGAGACCTTaGCCTTCTCCAGCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EMKPLTLRQLQPEGRAHKHSGRP*PSPASG Trigger: CCCAGAAGCTGGAGAAGGCCAAGGTCTCCCTGAATG...CTTGTGAGCCCTGCCCTCTGGCTGTAGTTGTCTGAGTGTGAGGGGTTTCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCCCCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATATTCCAAAGAGCTCTTaGGCTGCGTGCCGGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: PVPHWSTESNTSLELSLNIPKSS*AACRNT Trigger: TGTGTTCCGGCACGCAGCCCAAGAGCTCTTTGGAAT...ATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGGGGCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCCCCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATAAGCGCAACAGTACCTaGCCTTCCCTTTCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PVPHWSTESNTSLELSLNKRNST*PSLSSV Trigger: GACACTGGAAAGGGAAGGCCAGGTACTGTTGCGCTT...ATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGGGGCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTGCCCCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATCCACCTTTACAGGCTTaGTGCAATTCTGAGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVPHWSTESNTSLELSLNPPLQA*CNSEMA Trigger: GGCCATCTCAGAATTGCATCAAGCCTGTAAAGGTGG...ATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGGGGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR GCA 90 bp | CATAAAGGCTTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGAACAGTTAAAGAGCTCTTGGGCTaGGTGCCGGAACACATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HKGLVLTDCPEPKVLRTVKELLG*VPEHML Trigger: GAGCATGTGTTCCGGCACGCAGCCCAAGAGCTCTTT...AACTGTTCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAAGCCTTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | CCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGGTCGCCTTCTCCAGCTTCTaGGTTCTTCCGTCTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLEHRVQHILGALLELRVAFSSF*VLPSWF Trigger: GAACCAAGACGGAAGAACCCAGAAGCTGGAGAAGGC...GACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | GAAATGAAACCCCTCACACTCAGACAACTACAGCCAGAGGGCAGGGCTCACAAGCAGCCAGTGATGCTCTaGACTGCGGCGATATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EMKPLTLRQLQPEGRAHKQPVML*TAAIWK Trigger: TTTCCATATCGCCGCAGTCCAGAGCATCACTGGCTG...CTTGTGAGCCCTGCCCTCTGGCTGTAGTTGTCTGAGTGTGAGGGGTTTCATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | CCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGGTCCAGCCAGTGATGCTCTaGACTGCGGCGATATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLEHRVQHILGALLELRVQPVML*TAAIWK Trigger: TTTCCATATCGCCGCAGTCCAGAGCATCACTGGCTG...GACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | GTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTTGCACAAACTCTTTTTaGCTTTCCAAAAGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTHLQGPTCSQCPTGAQSCTNSF*LSKRLK Trigger: CTTCAGCCTTTTGGAAAGCCAAAAAGAGTTTGTGCA...ACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | CACATCCTTGGAGCTCTCCTTGAATTGAGGGTCTCGGGCGTATCCTGTGGGCTTTCCACATCACGGGTCTaGTACTCCTGGTTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HILGALLELRVSGVSCGLSTSRV*YSWLKK Trigger: CTTCTTCAACCAGGAGTACCAGACCCGTGATGTGGA...AAGCCCACAGGATACGCCCGAGACCCTCAATTCAAGGAGAGCTCCAAGGATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | GAATGTCCCTGGCACCAGAGAAGGTCATTTATTAAGGGCCCTCCTTCCATCCACCAGCAGACACACTACTaGTTAAGCCATCCAGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ECPWHQRRSFIKGPPSIHQQTHY*LSHPGA Trigger: CGCCCCTGGATGGCTTAACCAGTAGTGTGTCTGCTG...GTGGATGGAAGGAGGGCCCTTAATAAATGACCTTCTCTGGTGCCAGGGACATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS-3UTR CCA 90 bp | CATAGGCATAAAGGCTTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGAATTCCAAAGAGCTCTTaGGCTGCGTGCCGGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: HRHKGLVLTDCPEPKVLRIPKSS*AACRNT Trigger: TGTGTTCCGGCACGCAGCCCAAGAGCTCTTTGGAAT...TCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAAGCCTTTATGCCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| 3UTR CAA 72 bp | CACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATaGAGGGTCTCGGGCGTATCCTGTGGGCTTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRVQHILGALLE*RVSGVSCGLCF Trigger: GAAACAAAGCCCACAGGATACGCCCGAGACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGAACAGTTTTTAGAAGCTTCCGCAGTTCCTCGTaGCTCTGCTGGGTGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLTDCPEPKVLRTVFRSFRSSS*LCWVMS Trigger: ACTCATCACCCAGCAGAGTCACGAGGAACTGCGGAA...GCTTCTAAAAACTGTTCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR TCA 90 bp | AGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGGTCTCGGGCGTATCCTCTGGTACTCCTGGTTaGAGAAGTCAGGTCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RVQHILGALLELRVSGVSSGTPG*RSQVWM Trigger: CATCCAGACCTGACTTCTTCAACCAGGAGTACCAGA...GGATACGCCCGAGACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR TCA 90 bp | AGTGCCCCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGTCTGGTACTCCTGGTTaGAGAAGTCAGGTCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SAPLEHRVQHILGALLELSGTPG*RSQVWM Trigger: CATCCAGACCTGACTTCTTCAACCAGGAGTACCAGA...CAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGGGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR TCA 90 bp | AGCCATAGAAATGAAACCCCTCACACTCAGACAACTACAGCCAGAGGGCAGGGCTCTGGTACTCCTGGTTaGAGAAGTCAGGTCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SHRNETPHTQTTTARGQGSGTPG*RSQVWM Trigger: CATCCAGACCTGACTTCTTCAACCAGGAGTACCAGA...GCCCTGCCCTCTGGCTGTAGTTGTCTGAGTGTGAGGGGTTTCATTTCTATGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | AATTCCCCAGCATATTCTTCCCTGCAGAGAGGATGCAGTCCGTGCGTTCACAGGGGCTATGCCACTTCCTaGCTTCTTAGCCACCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NSPAYSSLQRGCSPCVHRGYATS*LLSHLY Trigger: GTAAAGGTGGCTAAGAAGCCAGGAAGTGGCATAGCC...CCTGTGAACGCACGGACTGCATCCTCTCTGCAGGGAAGAATATGCTGGGGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS-3UTR CCA 90 bp | CATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCAACATGCACAAACTCTTTTTaGCTTTCCAAAAGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLQGPTCSQCPTGAQSPTCTNSF*LSKRLK Trigger: CTTCAGCCTTTTGGAAAGCCAAAAAGAGTTTGTGCA...TGTTGGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGGTCTCGGGCGTATCCTCCACATCACGGGTCTaGTACTCCTGGTTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVQHILGALLELRVSGVSSTSRV*YSWLKK Trigger: CTTCTTCAACCAGGAGTACCAGACCCGTGATGTGGA...GGATACGCCCGAGACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | CCTGGCCTTACAGTGGGGGCTTCTGAGCACACACCAGAAAAAGTGAACTATGTGATTCCAAAGAGCTCTTaGGCTGCGTGCCGGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: PGLTVGASEHTPEKVNYVIPKSS*AACRNT Trigger: TGTGTTCCGGCACGCAGCCCAAGAGCTCTTTGGAAT...CACATAGTTCACTTTTTCTGGTGTGTGCTCAGAAGCCCCCACTGTAAGGCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGGTCTCGGGCGTATCCGTGACTTCAGCCACGTaGATTCCAAAGAGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVQHILGALLELRVSGVSVTSAT*IPKSSW Trigger: CCAAGAGCTCTTTGGAATCCACGTGGCTGAAGTCAC...GGATACGCCCGAGACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | CATAAAGGCTTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGAACAGTTAAGCGCAACAGTACCTaGCCTTCCCTTTCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HKGLVLTDCPEPKVLRTVKRNST*PSLSSV Trigger: GACACTGGAAAGGGAAGGCCAGGTACTGTTGCGCTT...AACTGTTCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAAGCCTTTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
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| CDS-3UTR GCA 90 bp | CCTGCCCTATGTGTTACAGCTTTGGGGATTAGCCATAGAAATGAAACCCCTCACCCGCTGCTGACCAGGTaGTGCCTCCTTATTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PALCVTALGISHRNETPHPLLTR*CLLISI Trigger: GATGCTAATAAGGAGGCAGCACCTGGTCAGCAGCGG...GTGAGGGGTTTCATTTCTATGGCTAATCCCCAAAGCTGTAACACATAGGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR GCA 90 bp | CATAGGCATAAAGGCTTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGATGCTCTCGGAAGCGCTaGACAAACTCTTTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HRHKGLVLTDCPEPKVLRCSRKR*TNSFWL Trigger: AAGCCAAAAAGAGTTTGTGCAGCGCTTCCGAGAGCA...TCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAAGCCTTTATGCCTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR GCA 90 bp | CCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGGTCTGCTCTCGGAAGCGCTaGACAAACTCTTTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLEHRVQHILGALLELRVCSRKR*TNSFWL Trigger: AAGCCAAAAAGAGTTTGTGCAGCGCTTCCGAGAGCA...GACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR GCA 90 bp | AGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGAGGGTCTCGGGCGTATCCCAGAAGCTGCTGTTGTaGGAAGAAGTCTTTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVQHILGALLELRVSGVSQKLLL*EEVFDQ Trigger: CTGGTCAAAGACTTCTTCGCACAACAGCAGCTTCTG...GGATACGCCCGAGACCCTCAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | GAAATGAAACCCCTCACACTCAGACAACTACAGCCAGAGGGCAGGGCTCACAAGTCCAGTGTCACTTCCTaGAAGTCCTTGTTCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EMKPLTLRQLQPEGRAHKSSVTS*KSLFLK Trigger: CTTGAGGAACAAGGACTTCCAGGAAGTGACACTGGA...CTTGTGAGCCCTGCCCTCTGGCTGTAGTTGTCTGAGTGTGAGGGGTTTCATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| 3UTR CAA 72 bp | CTGCCACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTaGTCTCTACTGCTCATGGAGCCCTATAAGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPPCFEEPASGV*SLLLMEPYKWD Trigger: ATCCCACTTATAGGGCTCCATGAGCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
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| CDS-3UTR GCA 90 bp | CATAAAGGCTTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGAACAGTTTCAGGAGTCAGAAGCTaGTGTTGTGCGAAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HKGLVLTDCPEPKVLRTVSGVRS*CCAKKS Trigger: AGACTTCTTCGCACAACAGCAGCTTCTGACTCCTGA...AACTGTTCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAAGCCTTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | TTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGAACAGTTTTTAGAAGCGGCTATGCCACTTCCTaGCTTCTTAGCCACCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LVLTDCPEPKVLRTVFRSGYATS*LLSHLY Trigger: GTAAAGGTGGCTAAGAAGCCAGGAAGTGGCATAGCC...GCTTCTAAAAACTGTTCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR CCA 90 bp | CCTGGCCTTACAGTGGGGGCTTCTGAGCACACACCAGAAAAAGTGAACTATGTGCTTCAATGTGGATCTTaGCTATGCCACTTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLTVGASEHTPEKVNYVLQCGS*LCHFLA Trigger: AGCCAGGAAGTGGCATAGCCAAGATCCACATTGAAG...CACATAGTTCACTTTTTCTGGTGTGTGCTCAGAAGCCCCCACTGTAAGGCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
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| CDS-3UTR CCA 90 bp | CCTGCCCTATGTGTTACAGCTTTGGGGATTAGCCATAGAAATGAAACCCCTCACGTGACTTCAGCCACGTaGATTCCAAAGAGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PALCVTALGISHRNETPHVTSAT*IPKSSW Trigger: CCAAGAGCTCTTTGGAATCCACGTGGCTGAAGTCAC...GTGAGGGGTTTCATTTCTATGGCTAATCCCCAAAGCTGTAACACATAGGGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGAACAGTTTTTAGAAGCTCCAGTGTCACTTCCTaGAAGTCCTTGTTCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVLTDCPEPKVLRTVFRSSSVTS*KSLFLK Trigger: CTTGAGGAACAAGGACTTCCAGGAAGTGACACTGGA...GCTTCTAAAAACTGTTCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
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| CDS-3UTR TCA 90 bp | CACAAACTCTTTTTGGCTTTCCAAAAGGCTGAAGTTCCTCGCGAAGGCAGTATCCCACCTTTACAGGCTTaGTGCAATTCTGAGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HKLFLAFQKAEVPREGSIPPLQA*CNSEMA Trigger: GGCCATCTCAGAATTGCATCAAGCCTGTAAAGGTGG...GATACTGCCTTCGCGAGGAACTTCAGCCTTTTGGAAAGCCAAAAAGAGTTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| CDS-3UTR CCA 90 bp | GAATGTCCCTGGCACCAGAGAAGGTCATTTATTAAGGGCCCTCCTTCCATCCACTGCACAAACTCTTTTTaGCTTTCCAAAAGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ECPWHQRRSFIKGPPSIHCTNSF*LSKRLK Trigger: CTTCAGCCTTTTGGAAAGCCAAAAAGAGTTTGTGCA...GTGGATGGAAGGAGGGCCCTTAATAAATGACCTTCTCTGGTGCCAGGGACATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS TCA 90 bp | GAGCTCTTGGGCTGCGTGCCGGAACACATGCTCCAGGTAGCCTCCTaGGCCTCCGCCCCGATGGCTGCTGGGCTCCTCAGCAGACACACT | + |
|
Preference number: 5 (lower is better) Translates to: ELLGCVPEHMLQVAS*ASAPMAAGLLSRHT Trigger: AGTGTGTCTGCTGAGGAGCCCAGCAGCCATCGGGGCGGAGGCTCAGGAGGCTACCTGGAGCATGTGTTCCGGCACGCAGCCCAAGAGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CCA 90 bp | ACACATGCTCCAGGTAGCCTCCTGAGCCTCCGCCCCGATGGCTGCTaGGCTCCTCAGCAGACACACTACTGGTTCTGGGAGAGGGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: THAPGSLLSLRPDGC*APQQTHYWFWERGG Trigger: CCCGCCCCTCTCCCAGAACCAGTAGTGTGTCTGCTGAGGAGCCCAGCAGCCATCGGGGCGGAGGCTCAGGAGGCTACCTGGAGCATGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS GCA 90 bp | GGAACACATGCTCCAGGTAGCCTCCTGAGCCTCCGCCCCGATGGCTaGTGGGCTCCTCAGCAGACACACTACTGGTTCTGGGAGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTHAPGSLLSLRPDG*WAPQQTHYWFWERG Trigger: GCCCCTCTCCCAGAACCAGTAGTGTGTCTGCTGAGGAGCCCAGCAGCCATCGGGGCGGAGGCTCAGGAGGCTACCTGGAGCATGTGTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CCA 90 bp | ACACATGCTCCAGGTAGCCTCCTGAGCCTCCGCCCCGATGGCTGCTaGGCTCCTCAGCAGACACACTACTGGTTAAGCCATCCAGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: THAPGSLLSLRPDGC*APQQTHYWLSHPGA Trigger: CGCCCCTGGATGGCTTAACCAGTAGTGTGTCTGCTGAGGAGCCCAGCAGCCATCGGGGCGGAGGCTCAGGAGGCTACCTGGAGCATGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS GCA 90 bp | GGAACACATGCTCCAGGTAGCCTCCTGAGCCTCCGCCCCGATGGCTaGTGGGCTCCTCAGCAGACACACTACTGGTTAAGCCATCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GTHAPGSLLSLRPDG*WAPQQTHYWLSHPG Trigger: CCCTGGATGGCTTAACCAGTAGTGTGTCTGCTGAGGAGCCCAGCAGCCATCGGGGCGGAGGCTCAGGAGGCTACCTGGAGCATGTGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS-3UTR CAA 90 bp | GCCAGAGACATGGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTCATTCAGGGAGACCTaGGCCTTCTCCAGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARDMGHASPRTHVQPVPHSFRET*AFSSFW Trigger: CCAGAAGCTGGAGAAGGCCAAGGTCTCCCTGAATGA...GTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCCATGTCTCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGCAGGGCTCACAAGATGTCCATGGCCCCAGGCCAGTGGAAGAGTCTGGGATTCCAAAGAGCTCTaGGGCTGCGTGCCGGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: QRAGLTRCPWPQASGRVWDSKEL*GCVPEH Trigger: GTGTTCCGGCACGCAGCCCAAGAGCTCTTTGGAATC...CCAGACTCTTCCACTGGCCTGGGGCCATGGACATCTTGTGAGCCCTGCCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTGCTGGTACAGCTCCTGGACCCCCGGTGCATCTTCGGGCGCCTCAGTCCTTCCGTCTTGGTTCACTaGGAAGTAACTGCCATCGTC | + |
|
Preference number: 5 (lower is better) Translates to: PVLVQLLDPRCIFGRLSPSVLVH*EVTAIV Trigger: GACGATGGCAGTTACTTCCAAGTGAACCAAGACGGA...AGGACTGAGGCGCCCGAAGATGCACCGGGGGTCCAGGAGCTGTACCAGCACTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | CATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACAGAGTCCAACAGATTCCAAAGAGCTCTaGGGCTGCGTGCCGGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: HLQGPTCSQCPTGAQSPTDSKEL*GCVPEH Trigger: GTGTTCCGGCACGCAGCCCAAGAGCTCTTTGGAATC...TGTTGGACTCTGTGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CCA 90 bp | GAGGATGAAGTTGCCATGTGTCTTCTCAGCATAGCAGATCCAGCCTaGGCAGGCGGAAGCCAGCACAGGCAAGGCCTCTCTGGAGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EDEVAMCLLSIADPA*AGGSQHRQGLSGVG Trigger: GCCAACTCCAGAGAGGCCTTGCCTGTGCTGGCTTCCGCCTGCCCAGGCTGGATCTGCTATGCTGAGAAGACACATGGCAACTTCATCCTC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | GCCCGCTCTGAGTCCTCTCCTTGCAGCCAGTGCTGGTACAGCTCCTGGACCCCCAGTCAGAAGCTGCTGTaGTGCGAAGAAGTCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ARSESSPCSQCWYSSWTPSQKLL*CEEVFD Trigger: GTCAAAGACTTCTTCGCACAACAGCAGCTTCTGACT...GGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGAGGACTCAGAGCGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCTTGCAGCCAGTGCTGGTACAGCTCCTGGACCCCCGGTGCATCTTCGGGCCTTGTTCCTCAAGGGTaGATAGGTGACTTCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SPCSQCWYSSWTPGASSGLVPQG*IGDFSH Trigger: GTGGCTGAAGTCACCTATCAACCCTTGAGGAACAAG...GCCCGAAGATGCACCGGGGGTCCAGGAGCTGTACCAGCACTGGCTGCAAGGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | TTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTTCGGGCACTCCTGGCCTTAAGTCAGAAGCTGCTGTaGTGCGAAGAAGTCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FQPAVEPPQPQVRALLALSQKLL*CEEVFD Trigger: GTCAAAGACTTCTTCGCACAACAGCAGCTTCTGACT...TAAGGCCAGGAGTGCCCGAACCTGCGGCTGTGGTGGCTCCACAGCAGGCTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS-3UTR CAA 90 bp | ACATGGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCACTTGTTCCTCAAGGGTaGATAGGTGACTTCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TWVTHLQGPTCSQCPTGALVPQG*IGDFSH Trigger: GTGGCTGAAGTCACCTATCAACCCTTGAGGAACAAG...TGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | ACATGGGTCACGCATCTCCAAGGACCCACGTGCAGCCAGTGCCCCACTGGAGCAAGTCAGAAGCTGCTGTaGTGCGAAGAAGTCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TWVTHLQGPTCSQCPTGASQKLL*CEEVFD Trigger: GTCAAAGACTTCTTCGCACAACAGCAGCTTCTGACT...TGCTCCAGTGGGGCACTGGCTGCACGTGGGTCCTTGGAGATGCGTGACCCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CCA 90 bp | CTGTTGTGCGAAGAAGTCTTTGACCAGGGAGCCCATAACCTGCTGTaGGGACCGGGCTGTACTGATGTAGGGGAGGATGAAGTTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LLCEEVFDQGAHNLL*GPGCTDVGEDEVAM Trigger: CATGGCAACTTCATCCTCCCCTACATCAGTACAGCCCGGTCCCCACAGCAGGTTATGGGCTCCCTGGTCAAAGACTTCTTCGCACAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGCAGGGCTCACAAGATGTCCATGGCCCCAGGCCAGTGGAAGAGTCTGGCTGCACAAACTCTTTTaGGCTTTCCAAAAGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QRAGLTRCPWPQASGRVWLHKLF*AFQKAE Trigger: TTCAGCCTTTTGGAAAGCCAAAAAGAGTTTGTGCAG...CCAGACTCTTCCACTGGCCTGGGGCCATGGACATCTTGTGAGCCCTGCCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | GACTGCCCAGAGCCCAAGGTCCTGAGAACAGTTTTTAGAAGCCTGGGTGCCTCATGTGCGAAGAAGTCTTaGACCAGGGAGCCCATAACC | + |
|
Preference number: 5 (lower is better) Translates to: DCPEPKVLRTVFRSLGASCAKKS*TREPIT Trigger: GGTTATGGGCTCCCTGGTCAAAGACTTCTTCGCACA...TGAGGCACCCAGGCTTCTAAAAACTGTTCTCAGGACCTTGGGCTCTGGGCAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | CATAAAGGCTTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGAACAGTTGATTCCAAAGAGCTCTaGGGCTGCGTGCCGGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: HKGLVLTDCPEPKVLRTVDSKEL*GCVPEH Trigger: GTGTTCCGGCACGCAGCCCAAGAGCTCTTTGGAATC...AACTGTTCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAAGCCTTTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCGGCGATATGGAAACGACCACCAGCCGCTGCTGACCAGGTGCTGCCTCCTCAAAAATTGGTTCACTaGGAAGTAACTGCCATCGTC | + |
|
Preference number: 5 (lower is better) Translates to: TAAIWKRPPAAADQVLPPQKLVH*EVTAIV Trigger: GACGATGGCAGTTACTTCCAAGTGAACCAATTTTTG...AGGAGGCAGCACCTGGTCAGCAGCGGCTGGTGGTCGTTTCCATATCGCCGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTGCCCCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATCTTGTTCCTCAAGGGTaGATAGGTGACTTCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PVPHWSTESNTSLELSLNLVPQG*IGDFSH Trigger: GTGGCTGAAGTCACCTATCAACCCTTGAGGAACAAG...ATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGGGGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCCCCACTGGAGCACAGAGTCCAACACATCCTTGGAGCTCTCCTTGAATTGTCCGTCTTGGTTCACTaGGAAGTAACTGCCATCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SAPLEHRVQHILGALLELSVLVH*EVTAIV Trigger: GACGATGGCAGTTACTTCCAAGTGAACCAAGACGGA...CAATTCAAGGAGAGCTCCAAGGATGTGTTGGACTCTGTGCTCCAGTGGGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | GAAATGAAACCCCTCACACTCAGACAACTACAGCCAGAGGGCAGGGCTCACAAGTCCGTCTTGGTTCACTaGGAAGTAACTGCCATCGTC | + |
|
Preference number: 5 (lower is better) Translates to: EMKPLTLRQLQPEGRAHKSVLVH*EVTAIV Trigger: GACGATGGCAGTTACTTCCAAGTGAACCAAGACGGA...CTTGTGAGCCCTGCCCTCTGGCTGTAGTTGTCTGAGTGTGAGGGGTTTCATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTACTGACAGACTGCCCAGAGCCCAAGGTCCTGAGAACAGTTTTTAGAAGCTCATTCAGGGAGACCTaGGCCTTCTCCAGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVLTDCPEPKVLRTVFRSSFRET*AFSSFW Trigger: CCAGAAGCTGGAGAAGGCCAAGGTCTCCCTGAATGA...GCTTCTAAAAACTGTTCTCAGGACCTTGGGCTCTGGGCAGTCTGTCAGTACCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGCCTTACAGTGGGGGCTTCTGAGCACACACCAGAAAAAGTGAACTATGTGTGTGCGAAGAAGTCTTaGACCAGGGAGCCCATAACC | + |
|
Preference number: 5 (lower is better) Translates to: PGLTVGASEHTPEKVNYVCAKKS*TREPIT Trigger: GGTTATGGGCTCCCTGGTCAAAGACTTCTTCGCACA...CACATAGTTCACTTTTTCTGGTGTGTGCTCAGAAGCCCCCACTGTAAGGCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS TCA 90 bp | GAGACCTTGGCCTTCTCCAGCTTCTGGGTTCTTCCGTCCTGGAGGTaGGCAAAAATTGGTTCACTTGGAAGTAACTGCCATCGTCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ETLAFSSFWVLPSWR*AKIGSLGSNCHRLQ Trigger: TTGAAGACGATGGCAGTTACTTCCAAGTGAACCAATTTTTGCTCACCTCCAGGACGGAAGAACCCAGAAGCTGGAGAAGGCCAAGGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCCTATGTGTTACAGCTTTGGGGATTAGCCATAGAAATGAAACCCCTCACTGTGCGAAGAAGTCTTaGACCAGGGAGCCCATAACC | + |
|
Preference number: 5 (lower is better) Translates to: PALCVTALGISHRNETPHCAKKS*TREPIT Trigger: GGTTATGGGCTCCCTGGTCAAAGACTTCTTCGCACA...GTGAGGGGTTTCATTTCTATGGCTAATCCCCAAAGCTGTAACACATAGGGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS-3UTR CAA 90 bp | AATTCCCCAGCATATTCTTCCCTGCAGAGAGGATGCAGTCCGTGCGTTCACAGGCTGCACAAACTCTTTTaGGCTTTCCAAAAGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NSPAYSSLQRGCSPCVHRLHKLF*AFQKAE Trigger: TTCAGCCTTTTGGAAAGCCAAAAAGAGTTTGTGCAG...CCTGTGAACGCACGGACTGCATCCTCTCTGCAGGGAAGAATATGCTGGGGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS-3UTR CAA 90 bp | GAAATGAAACCCCTCACACTCAGACAACTACAGCCAGAGGGCAGGGCTCACAAGCTGCACAAACTCTTTTaGGCTTTCCAAAAGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EMKPLTLRQLQPEGRAHKLHKLF*AFQKAE Trigger: TTCAGCCTTTTGGAAAGCCAAAAAGAGTTTGTGCAG...CTTGTGAGCCCTGCCCTCTGGCTGTAGTTGTCTGAGTGTGAGGGGTTTCATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CCA 90 bp | GTAACTGCCATCGTCTTCAATGTGGATCTTGGCTATGCCACTTCCTaGCTTCTTAGCCACCTTTACAGGCTTGATGCAATTCTGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: VTAIVFNVDLGYATS*LLSHLYRLDAILRW Trigger: CCATCTCAGAATTGCATCAAGCCTGTAAAGGTGGCTAAGAAGCCAGGAAGTGGCATAGCCAAGATCCACATTGAAGACGATGGCAGTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002350.11 ENSMUST00000131458.8 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS TCA 72 bp | GGCTGCGTGCCGGAACACATGCTCCAGGTAGCCTCCTaGGCCTCCGCCCCGATGGCTGCTGGGCTCCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GCVPEHMLQVAS*ASAPMAAGLLS Trigger: GCTGAGGAGCCCAGCAGCCATCGGGGCGGAGGCTCAGGAGGCTACCTGGAGCATGTGTTCCGGCACGCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CCA 72 bp | CCAGGTAGCCTCCTGAGCCTCCGCCCCGATGGCTGCTaGGCTCCTCAGCAGACACACTACTGGTTCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGSLLSLRPDGC*APQQTHYWFWE Trigger: CTCCCAGAACCAGTAGTGTGTCTGCTGAGGAGCCCAGCAGCCATCGGGGCGGAGGCTCAGGAGGCTACCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CCA 72 bp | AGGAGCTCGCTGCCCTCTGTATCCGGAGCCTTGAGCTaGCCCCCTCCATTCAAGCAACCTGAAGGGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSSLPSVSGALS*PPPFKQPEGQA Trigger: GGCCTGCCCTTCAGGTTGCTTGAATGGAGGGGGCCAGCTCAAGGCTCCGGATACAGAGGGCAGCGAGCTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
||
| CDS TCA 72 bp | GCTGAAGGAGCTCGCTGCCCTCTGTATCCGGAGCCTTaGGCTGGCCCCCTCCATTCAAGCAACCTGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AEGARCPLYPEP*AGPLHSSNLKG Trigger: GCCCTTCAGGTTGCTTGAATGGAGGGGGCCAGCTCAAGGCTCCGGATACAGAGGGCAGCGAGCTCCTTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 |
||
| CDS CCA 72 bp | CCAGGTAGCCTCCTGAGCCTCCGCCCCGATGGCTGCTaGGCTCCTCAGCAGACACACTACTGGTTAAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PGSLLSLRPDGC*APQQTHYWLSH Trigger: ATGGCTTAACCAGTAGTGTGTCTGCTGAGGAGCCCAGCAGCCATCGGGGCGGAGGCTCAGGAGGCTACCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002350.11 |
||
| CDS CCA 72 bp | GTTGCCATGTGTCTTCTCAGCATAGCAGATCCAGCCTaGGCAGGCGGAAGCCAGCACAGGCAAGGCCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VAMCLLSIADPA*AGGSQHRQGLS Trigger: AGAGAGGCCTTGCCTGTGCTGGCTTCCGCCTGCCCAGGCTGGATCTGCTATGCTGAGAAGACACATGGCAAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CAA 72 bp | ATAGGTGACTTCAGCCACGTGGATTCCAAAGAGCTCTaGGGCTGCGTGCCGGAACACATGCTCCAGGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: IGDFSHVDSKEL*GCVPEHMLQVA Trigger: GGCTACCTGGAGCATGTGTTCCGGCACGCAGCCCAAGAGCTCTTTGGAATCCACGTGGCTGAAGTCACCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CCA 72 bp | GAAGAAGTCTTTGACCAGGGAGCCCATAACCTGCTGTaGGGACCGGGCTGTACTGATGTAGGGGAGGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: EEVFDQGAHNLL*GPGCTDVGEDE Trigger: TTCATCCTCCCCTACATCAGTACAGCCCGGTCCCCACAGCAGGTTATGGGCTCCCTGGTCAAAGACTTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS TCA 72 bp | GGCTTCTTAGCCACCTTTACAGGCTTGATGCAATTCTaGGATGGCCCGATGAAGTCGTCCAAGTCGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GFLATFTGLMQF*DGPMKSSKSVS Trigger: GCTGACCGACTTGGACGACTTCATCGGGCCATCTCAGAATTGCATCAAGCCTGTAAAGGTGGCTAAGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002350.11 ENSMUST00000131458.8 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CAA 90 bp | GACCTTGGCCTTCTCCAGCTTCTGGGTTCTTCCGTCTTGGTTCACTaGGAAGTAACTGCCATCGTCTTCAATGTGGATCTTGGCTATGCC | + |
|
Preference number: 6 (lower is better) Translates to: DLGLLQLLGSSVLVH*EVTAIVFNVDLGYA Trigger: GGCATAGCCAAGATCCACATTGAAGACGATGGCAGTTACTTCCAAGTGAACCAAGACGGAAGAACCCAGAAGCTGGAGAAGGCCAAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CCA 72 bp | GTAAGGACACAGTCCACATCACGGGTCTGGTACTCCTaGTTGAAGAAGTCAGGTCTGGATGCTTCTAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VRTQSTSRVWYS*LKKSGLDASSF Trigger: AAAGCTAGAAGCATCCAGACCTGACTTCTTCAACCAGGAGTACCAGACCCGTGATGTGGACTGTGTCCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CAA 72 bp | GACCTTGGCCTTCTCCAGCTTCTGGGTTCTTCCGTCTaGGTTCACTTGGAAGTAACTGCCATCGTCTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: DLGLLQLLGSSV*VHLEVTAIVFN Trigger: ATTGAAGACGATGGCAGTTACTTCCAAGTGAACCAAGACGGAAGAACCCAGAAGCTGGAGAAGGCCAAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CAA 90 bp | ATTCAGGGAGACCTTGGCCTTCTCCAGCTTCTGGGTTCTTCCGTCTaGGTTCACTTGGAAGTAACTGCCATCGTCTTCAATGTGGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: IQGDLGLLQLLGSSV*VHLEVTAIVFNVDL Trigger: AAGATCCACATTGAAGACGATGGCAGTTACTTCCAAGTGAACCAAGACGGAAGAACCCAGAAGCTGGAGAAGGCCAAGGTCTCCCTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CAA 90 bp | GCTTCTGGGTTCTTCCGTCCTGGAGGTGAGCAAAAATTGGTTCACTaGGAAGTAACTGCCATCGTCTTCAATGTGGATCTTGGCTATGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASGFFRPGGEQKLVH*EVTAIVFNVDLGYA Trigger: GGCATAGCCAAGATCCACATTGAAGACGATGGCAGTTACTTCCAAGTGAACCAATTTTTGCTCACCTCCAGGACGGAAGAACCCAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| CDS TCA 72 bp | GGACACAGTCCACATCACGGGTCTGGTACTCCTGGTTaGAGAAGTCAGGTCTGGATGCTTCTAGCTTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: GHSPHHGSGTPG*RSQVWMLLAFY Trigger: ATAAAAAGCTAGAAGCATCCAGACCTGACTTCTTCAACCAGGAGTACCAGACCCGTGATGTGGACTGTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CAA 72 bp | TACATGGTAGATCTTGTCAGGAGTCAGAAGCTGCTGTaGTGCGAAGAAGTCTTTGACCAGGGAGCCCATAAC | + |
|
Preference number: 6 (lower is better) Translates to: YMVDLVRSQKLL*CEEVFDQGAHN Trigger: GTTATGGGCTCCCTGGTCAAAGACTTCTTCGCACAACAGCAGCTTCTGACTCCTGACAAGATCTACCATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CAA 72 bp | AGGACACAGTCCACATCACGGGTCTGGTACTCCTGGTaGAAGAAGTCAGGTCTGGATGCTTCTAGCTTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: RTQSTSRVWYSW*KKSGLDASSFL Trigger: TAAAAAGCTAGAAGCATCCAGACCTGACTTCTTCAACCAGGAGTACCAGACCCGTGATGTGGACTGTGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002350.11 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||
| CDS CAA 90 bp | CCTTCTCCAGCTTCTGGGTTCTTCCGTCCTGGAGGTGAGCAAAAATaGGTTCACTTGGAAGTAACTGCCATCGTCTTCAATGTGGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSPASGFFRPGGEQK*VHLEVTAIVFNVDL Trigger: AAGATCCACATTGAAGACGATGGCAGTTACTTCCAAGTGAACCAATTTTTGCTCACCTCCAGGACGGAAGAACCCAGAAGCTGGAGAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| CDS CAA 72 bp | GCTTCTGGGTTCTTCCGTCCTGGAGGTGAGCAAAAATaGGTTCACTTGGAAGTAACTGCCATCGTCTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: ASGFFRPGGEQK*VHLEVTAIVFN Trigger: ATTGAAGACGATGGCAGTTACTTCCAAGTGAACCAATTTTTGCTCACCTCCAGGACGGAAGAACCCAGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131458.8 |
||
| CDS CCA 72 bp | ATCGTCTTCAATGTGGATCTTGGCTATGCCACTTCCTaGCTTCTTAGCCACCTTTACAGGCTTGATGCAATT | + |
|
Preference number: 6 (lower is better) Translates to: IVFNVDLGYATS*LLSHLYRLDAI Trigger: AATTGCATCAAGCCTGTAAAGGTGGCTAAGAAGCCAGGAAGTGGCATAGCCAAGATCCACATTGAAGACGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002350.11 ENSMUST00000131458.8 ENSMUST00000134108.8 ENSMUST00000237541.2 |
||