Pregenerated sensors for CIAO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003662Ensembl transcript IDs: ENSMUST00000003759.11, ENSMUST00000172636.2, ENSMUST00000174030.8, ENSMUST00000174863.8
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGAGGCCAGGAGCCCTGGCTCCTTGGGATTCCAAGCCACACAGTTaGCATCCTGGGAATGGGCCTGACGAAGATGGGCTGTCAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: KRPGALAPWDSKPHS*HPGNGPDEDGLSER Trigger: TCTCTCTGACAGCCCATCTTCGTCAGGCCCATTCCCAGGATGTCAACTGTGTGGCTTGGAATCCCAAGGAGCCAGGGCTCCTGGCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR CCA 90 bp | CCAGAAGGCTACCTCCCCATCATCACTACAAGAGGCCAGGAGCCCTaGCTCCTTGGGATTCCAAGCCACACAGTTGACATCCTGGGAATG | + |
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Preference number: 1 (lower is better) Translates to: PEGYLPIITTRGQEP*LLGIPSHTVDILGM Trigger: CATTCCCAGGATGTCAACTGTGTGGCTTGGAATCCCAAGGAGCCAGGGCTCCTGGCCTCTTGTAGTGATGATGGGGAGGTAGCCTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR TCA 90 bp | TCAAGACTCCCAAGTCAAGCTATAGCTCAGAGACCTGCAGGCTGGTaGTACTCCCAGAAGGCTACCTCCCCATCATCACTACAAGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: SRLPSQAIAQRPAGW*YSQKATSPSSLQEA Trigger: GGCCTCTTGTAGTGATGATGGGGAGGTAGCCTTCTGGGAGTATCACCAGCCTGCAGGTCTCTGAGCTATAGCTTGACTTGGGAGTCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR GCA 90 bp | TCTGTGGGAATCAAGACTCCCAAGTCAAGCTATAGCTCAGAGACCTaGAGGCTGGTGATACTCCCAGAAGGCTACCTCCCCATCATCACT | + |
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Preference number: 1 (lower is better) Translates to: SVGIKTPKSSYSSET*RLVILPEGYLPIIT Trigger: AGTGATGATGGGGAGGTAGCCTTCTGGGAGTATCACCAGCCTGCAGGTCTCTGAGCTATAGCTTGACTTGGGAGTCTTGATTCCCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR TCA 90 bp | GAGAAGCCAGTTAGCGTGTCTGCTCAGTCTGTTGTATGGTTGAGCTaGGCATGTCAACTTCAGGTTGGGAAAGAAGAGTTTCCAAATCAC | + |
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Preference number: 1 (lower is better) Translates to: EKPVSVSAQSVVWLS*ACQLQVGKEEFPNH Trigger: GTGATTTGGAAACTCTTCTTTCCCAACCTGAAGTTGACATGCTCAGCTCAACCATACAACAGACTGAGCAGACACGCTAACTGGCTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| 3UTR TCA 90 bp | CTTAAGAGAAGCCAGTTAGCGTGTCTGCTCAGTCTGTTGTATGGTTaGGCTGAGCATGTCAACTTCAGGTTGGGAAAGAAGAGTTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: LKRSQLACLLSLLYG*AEHVNFRLGKKSFQ Trigger: TTGGAAACTCTTCTTTCCCAACCTGAAGTTGACATGCTCAGCTCAACCATACAACAGACTGAGCAGACACGCTAACTGGCTTCTCTTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| 3UTR TCA 90 bp | AATAGTCCTGAGCAAAATGAAGGTCAAGGATGCTTCAGGTCTTCTTaGCGACTAGAAGTCTTAGGACGTTTTCTGTGGGAATCAAGACTC | + |
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Preference number: 1 (lower is better) Translates to: NSPEQNEGQGCFRSS*RLEVLGRFLWESRL Trigger: GAGTCTTGATTCCCACAGAAAACGTCCTAAGACTTCTAGTCGTCAAGAAGACCTGAAGCATCCTTGACCTTCATTTTGCTCAGGACTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| 3UTR CCA 90 bp | AGCATGTCAACTTCAGGTTGGGAAAGAAGAGTTTCCAAATCACTGTaGCTGTCCTTAGATACTACTGTATGGTACTGTATGTGGAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: SMSTSGWERRVSKSL*LSLDTTVWYCMWKF Trigger: AAACTTCCACATACAGTACCATACAGTAGTATCTAAGGACAGCCACAGTGATTTGGAAACTCTTCTTTCCCAACCTGAAGTTGACATGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| 3UTR-3UTR GCA 90 bp | CAAGAGGCCAGGAGCCCTGGCTCCTTGGGATTCCAAGCCACACAGTTGACATCCAGAGAGAAGGTGGGCTaGTGTGGGTCTGAGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: QEARSPGSLGFQATQLTSREKVG*CGSEPG Trigger: CCCAGGCTCAGACCCACAGCAGCCCACCTTCTCTCT...GGATGTCAACTGTGTGGCTTGGAATCCCAAGGAGCCAGGGCTCCTGGCCTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGGCCAGGAGCCCTGGCTCCTTGGGATTCCAAGCCACACAGTTGACATCCCCTCAAACACTCGGATaGCATCATCTCCACAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: QEARSPGSLGFQATQLTSPQTLG*HHLHKL Trigger: CAGCTTGTGGAGATGATGCCATCCGAGTGTTTGAGG...GGATGTCAACTGTGTGGCTTGGAATCCCAAGGAGCCAGGGCTCCTGGCCTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR-3UTR CCA 90 bp | ATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGAAGGGAAACAGTGGGAGCCCTGGCTCCTTaGGATTCCAAGCCACACAGT | + |
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Preference number: 2 (lower is better) Translates to: ILLFCGSLQWLPQGRETVGALAP*DSKPHS Trigger: ACTGTGTGGCTTGGAATCCCAAGGAGCCAGGGCTCC...CACTGTTTCCCTTCCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR-3UTR TCA 90 bp | AATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGAAGGGGGGCTGCTGTGGGTCTaGGCCTGGGTCTTCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: NTIYCCSVALSNGFLKEGGLLWV*AWVFLK Trigger: TTTGAGGAAGACCCAGGCTCAGACCCACAGCAGCCC...CCCTTCCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTATT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR-3UTR CCA 90 bp | CCCATCATCACTACAAGAGGCCAGGAGCCCTGGCTCCTTGGGATTCCAAGCCACTTAGGACGTTTTCTGTaGGAATCAAGACTCCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: PIITTRGQEPWLLGIPSHLGRFL*ESRLPS Trigger: ACTTGGGAGTCTTGATTCCCACAGAAAACGTCCTAA...GTGGCTTGGAATCCCAAGGAGCCAGGGCTCCTGGCCTCTTGTAGTGATGATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR-3UTR TCA 90 bp | TCATCACTACAAGAGGCCAGGAGCCCTGGCTCCTTGGGATTCCAAGCCACACAGAAGGAAGGGAAACAGTaGATAGTCCTGAGCAAAATG | + |
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Preference number: 2 (lower is better) Translates to: SSLQEARSPGSLGFQATQKEGKQ*IVLSKM Trigger: CATTTTGCTCAGGACTATTCACTGTTTCCCTTCCTT...CTGTGTGGCTTGGAATCCCAAGGAGCCAGGGCTCCTGGCCTCTTGTAGTGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR-3UTR TCA 90 bp | AGGATGCTTCAGGTCTTCTTGACGACTAGAAGTCTTAGGACGTTTTCTGTGGGATCCTGGGAATGGGCCTaGCGAAGATGGGCTGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: RMLQVFLTTRSLRTFSVGSWEWA*RRWAVR Trigger: TCTGACAGCCCATCTTCGTCAGGCCCATTCCCAGGA...TCCCACAGAAAACGTCCTAAGACTTCTAGTCGTCAAGAAGACCTGAAGCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAAGGATGCTTCAGGTCTTCTTGACGACTAGAAGTCTTAGGACGTTTTCTTCCAAGCCACACAGTTaGCATCCTGGGAATGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RSRMLQVFLTTRSLRTFSSKPHS*HPGNGP Trigger: AGGCCCATTCCCAGGATGTCAACTGTGTGGCTTGGA...AGAAAACGTCCTAAGACTTCTAGTCGTCAAGAAGACCTGAAGCATCCTTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR-3UTR CCA 90 bp | TACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGAAGGGAATGTGGCTCTCTCCAATaGCTTCCTCAAGGAAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: YNILLFCGSLQWLPQGRECGSLQ*LPQGRE Trigger: TTCCCTTCCTTGAGGAAGCCATTGGAGAGAGCCACA...TTCCCTTCCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGAACTGTCAGAGAGAAGGTaGGCTGCTGTGGGTCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: FNTIYCCSVALSNGFLKELSERR*AAVGLS Trigger: GCTCAGACCCACAGCAGCCCACCTTCTCTCTGACAG...TTCCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTATTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR-3UTR TCA 90 bp | ATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGAAGGGAAACAGAAGGAAGGGAAACAGTaGATAGTCCTGAGCAAAATG | + |
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Preference number: 2 (lower is better) Translates to: IYCCSVALSNGFLKEGKQKEGKQ*IVLSKM Trigger: CATTTTGCTCAGGACTATTCACTGTTTCCCTTCCTT...CTGTTTCCCTTCCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCATTTCAGAGGGGCTAGGTGGAACTTTCTCATTTGTCAGTATCAGAAATGGTTAGGACGTTTTCTGTaGGAATCAAGACTCCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: LHFRGARWNFLICQYQKWLGRFL*ESRLPS Trigger: ACTTGGGAGTCTTGATTCCCACAGAAAACGTCCTAA...CCATTTCTGATACTGACAAATGAGAAAGTTCCACCTAGCCCCTCTGAAATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| 3UTR-3UTR GCA 90 bp | CAGACCACTAGTCAACGCTATGTCTCCACTGTCTGCAAAAATCTAAGGTCACAGCAAAATGTAACACCATaGCCTAAATCAAGCAAAACT | + |
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Preference number: 2 (lower is better) Translates to: QTTSQRYVSTVCKNLRSQQNVTP*PKSSKT Trigger: AGTTTTGCTTGATTTAGGGCATGGTGTTACATTTTG...CTGTGACCTTAGATTTTTGCAGACAGTGGAGACATAGCGTTGACTAGTGGTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| 3UTR-3UTR CAA 90 bp | AAGCTCCTGGCTCGGGTGCCAAACCACGTGCTTAACGTCCTGCGTATGAGAGCTCAGGTAGCCAAGAGGTaGCCAGATGGGGCCCAAGCC | + |
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Preference number: 3 (lower is better) Translates to: KLLARVPNHVLNVLRMRAQVAKR*PDGAQA Trigger: GGCTTGGGCCCCATCTGGCAACCTCTTGGCTACCTG...AGCTCTCATACGCAGGACGTTAAGCACGTGGTTTGGCACCCGAGCCAGGAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172636.2 |
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| 3UTR TCA 72 bp | GGAGCCCTGGCTCCTTGGGATTCCAAGCCACACAGTTaGCATCCTGGGAATGGGCCTGACGAAGATGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: GALAPWDSKPHS*HPGNGPDEDGL Trigger: CAGCCCATCTTCGTCAGGCCCATTCCCAGGATGTCAACTGTGTGGCTTGGAATCCCAAGGAGCCAGGGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGACCCACACGCTCTTATCTCTGCTGCAGGTAGCCAAGAGGTTGCCAGATGGGCCCAAGCCACTGACTaGACCTCATTTTCATGGCCC | + |
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Preference number: 3 (lower is better) Translates to: PDPHALISAAGSQEVARWAQATD*TSFSWP Trigger: GGGCCATGAAAATGAGGTCAAGTCAGTGGCTTGGGC...CCATCTGGCAACCTCTTGGCTACCTGCAGCAGAGATAAGAGCGTGTGGGTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172636.2 |
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| 3UTR CCA 72 bp | TACCTCCCCATCATCACTACAAGAGGCCAGGAGCCCTaGCTCCTTGGGATTCCAAGCCACACAGTTGACATC | + |
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Preference number: 3 (lower is better) Translates to: YLPIITTRGQEP*LLGIPSHTVDI Trigger: GATGTCAACTGTGTGGCTTGGAATCCCAAGGAGCCAGGGCTCCTGGCCTCTTGTAGTGATGATGGGGAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR TCA 72 bp | CTCGGGTGCCAAACCACGTGCTTAACGTCCTGCGTATaGGAGCTGAGGACACTGACACACTCATACTCATCC | + |
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Preference number: 3 (lower is better) Translates to: LGCQTTCLTSCV*ELRTLTHSYSS Trigger: GGATGAGTATGAGTGTGTCAGTGTCCTCAGCTCTCATACGCAGGACGTTAAGCACGTGGTTTGGCACCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172636.2 |
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| 3UTR GCA 72 bp | ATCAAGACTCCCAAGTCAAGCTATAGCTCAGAGACCTaGAGGCTGGTGATACTCCCAGAAGGCTACCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: IKTPKSSYSSET*RLVILPEGYLP Trigger: GGGGAGGTAGCCTTCTGGGAGTATCACCAGCCTGCAGGTCTCTGAGCTATAGCTTGACTTGGGAGTCTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTCAAGGATGCTTCAGGTCTTCTTGACGACTAGAAGTCTTAGGACGTTTTCTAGGAGCCCTGGCTCCTaGGGATTCCAAGCCACACAG | + |
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Preference number: 3 (lower is better) Translates to: RSRMLQVFLTTRSLRTFSRSPGS*GFQATQ Trigger: CTGTGTGGCTTGGAATCCCAAGGAGCCAGGGCTCCT...AGAAAACGTCCTAAGACTTCTAGTCGTCAAGAAGACCTGAAGCATCCTTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| 3UTR TCA 72 bp | AGCCAGTTAGCGTGTCTGCTCAGTCTGTTGTATGGTTaGGCTGAGCATGTCAACTTCAGGTTGGGAAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: SQLACLLSLLYG*AEHVNFRLGKK Trigger: CTTCTTTCCCAACCTGAAGTTGACATGCTCAGCTCAACCATACAACAGACTGAGCAGACACGCTAACTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| 3UTR TCA 72 bp | GTTAGCGTGTCTGCTCAGTCTGTTGTATGGTTGAGCTaGGCATGTCAACTTCAGGTTGGGAAAGAAGAGTTT | + |
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Preference number: 3 (lower is better) Translates to: VSVSAQSVVWLS*ACQLQVGKEEF Trigger: AAACTCTTCTTTCCCAACCTGAAGTTGACATGCTCAGCTCAACCATACAACAGACTGAGCAGACACGCTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| 3UTR CCA 72 bp | TGGCTGTCCTTAGATACTACTGTATGGTACTGTATGTaGAAGTTTCCTAAAGGCAGTGTAGGCTCCTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: WLSLDTTVWYCM*KFPKGSVGSSA Trigger: AGCTGAGGAGCCTACACTGCCTTTAGGAAACTTCCACATACAGTACCATACAGTAGTATCTAAGGACAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| 3UTR CCA 72 bp | TGTTGTATGGTTGAGCTGAGCATGTCAACTTCAGGTTaGGAAAGAAGAGTTTCCAAATCACTGTGGCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: CCMVELSMSTSG*ERRVSKSLWLS Trigger: GGACAGCCACAGTGATTTGGAAACTCTTCTTTCCCAACCTGAAGTTGACATGCTCAGCTCAACCATACAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| 3UTR-3UTR CAA 90 bp | CAGACCACTAGTCAACGCTATGTCTCCACTGTCTGCAAAAATCTAAGGTCACAGCACTTTGTAGATGTTTaGTGTCCCTCACTGAAAACC | + |
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Preference number: 3 (lower is better) Translates to: QTTSQRYVSTVCKNLRSQHFVDV*CPSLKT Trigger: GGTTTTCAGTGAGGGACACAAAACATCTACAAAGTG...CTGTGACCTTAGATTTTTGCAGACAGTGGAGACATAGCGTTGACTAGTGGTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| 3UTR TCA 72 bp | GAGCAAAATGAAGGTCAAGGATGCTTCAGGTCTTCTTaGCGACTAGAAGTCTTAGGACGTTTTCTGTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: EQNEGQGCFRSS*RLEVLGRFLWE Trigger: TTCCCACAGAAAACGTCCTAAGACTTCTAGTCGTCAAGAAGACCTGAAGCATCCTTGACCTTCATTTTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| 3UTR CCA 72 bp | TCCAAATCACTGTGGCTGTCCTTAGATACTACTGTATaGTACTGTATGTGGAAGTTTCCTAAAGGCAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: SKSLWLSLDTTV*YCMWKFPKGSV Trigger: TACACTGCCTTTAGGAAACTTCCACATACAGTACCATACAGTAGTATCTAAGGACAGCCACAGTGATTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| 3UTR CCA 72 bp | ACTTCAGGTTGGGAAAGAAGAGTTTCCAAATCACTGTaGCTGTCCTTAGATACTACTGTATGGTACTGTATG | + |
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Preference number: 3 (lower is better) Translates to: TSGWERRVSKSL*LSLDTTVWYCM Trigger: CATACAGTACCATACAGTAGTATCTAAGGACAGCCACAGTGATTTGGAAACTCTTCTTTCCCAACCTGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| 3UTR TCA 72 bp | TCAATGTCAATTTTAAGTCATGTTTGTTGTCTTGAGTaGAGCTGGCTCCATTCTCACTATGAAGAAGATAAA | + |
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Preference number: 3 (lower is better) Translates to: SMSILSHVCCLE*SWLHSHYEEDK Trigger: TTTATCTTCTTCATAGTGAGAATGGAGCCAGCTTCACTCAAGACAACAAACATGACTTAAAATTGACATTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS-3UTR GCA 90 bp | CTCCTGGCTCGGGTGCCAAACCACGTGCTTAACGTCCTGCGTATGAGAGCTGAGCAGCGGGAATCCGGGTaGGCCGGGACGCGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLARVPNHVLNVLRMRAEQRESG*AGTRLC Trigger: GCAGAGCCGCGTCCCGGCGCACCCGGATTCCCGCTG...CTCAGCTCTCATACGCAGGACGTTAAGCACGTGGTTTGGCACCCGAGCCAGGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172636.2 |
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| CDS-3UTR GCA 90 bp | GCTGTCAGAGAGAAGGTGGGCTGCTGTGGGTCTGAGCCTGGGTCTTCCTCAAACGTCATCACTGCAAGATaGCAGCCGCTGGCCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AVREKVGCCGSEPGSSSNVITAR*QPLAAG Trigger: CCCAGCGGCCAGCGGCTGGCATCTTGCAGTGATGAC...GTTTGAGGAAGACCCAGGCTCAGACCCACAGCAGCCCACCTTCTCTCTGACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| CDS-3UTR GCA 90 bp | GACCCACACGCTCTTATCTCTGCTGCAGGTAGCCAAGAGGTTGCCAGATGGGGCCCTCGGTGCCCCAGATaGGAATTTTACGGTCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: DPHALISAAGSQEVARWGPRCPR*EFYGRL Trigger: GAGGCGACCGTAAAATTCGCATCTGGGGCACCGAGG...GCCCCATCTGGCAACCTCTTGGCTACCTGCAGCAGAGATAAGAGCGTGTGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172636.2 |
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| CDS-3UTR TCA 90 bp | GCTGTCAGAGAGAAGGTGGGCTGCTGTGGGTCTGAGCCTGGGTCTTCCTCAAACCAAACAGTGGACTCATaGCCTTCGAGGGTGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: AVREKVGCCGSEPGSSSNQTVDS*PSRVAQ Trigger: CTGTGCCACCCTCGAAGGTCATGAGTCCACTGTTTG...GTTTGAGGAAGACCCAGGCTCAGACCCACAGCAGCCCACCTTCTCTCTGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| CDS-3UTR GCA 90 bp | TACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGAAGGGAACAGCGGGAATCCGGGTaGGCCGGGACGCGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: YNILLFCGSLQWLPQGREQRESG*AGTRLC Trigger: GCAGAGCCGCGTCCCGGCGCACCCGGATTCCCGCTG...TTCCCTTCCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| CDS-3UTR TCA 90 bp | GAGAAGGTGGGCTGCTGTGGGTCTGAGCCTGGGTCTTCCTCAAACACTCGGATGTTCCTAACGGTGCGCTaGTGGCCTTCAGAAAGGACA | + |
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Preference number: 4 (lower is better) Translates to: EKVGCCGSEPGSSSNTRMFLTVR*WPSERT Trigger: TGTCCTTTCTGAAGGCCATCAGCGCACCGTTAGGAA...CATCCGAGTGTTTGAGGAAGACCCAGGCTCAGACCCACAGCAGCCCACCTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| CDS-3UTR GCA 90 bp | CAAGAGGCCAGGAGCCCTGGCTCCTTGGGATTCCAAGCCACACAGTTGACATCCAGCTGTCACCCTCGGTaGCCCAGATGCGAATTTTAC | + |
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Preference number: 4 (lower is better) Translates to: QEARSPGSLGFQATQLTSSCHPR*PRCEFY Trigger: GTAAAATTCGCATCTGGGGCACCGAGGGTGACAGCT...GGATGTCAACTGTGTGGCTTGGAATCCCAAGGAGCCAGGGCTCCTGGCCTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| CDS-3UTR GCA 90 bp | CTCCTGGCTCGGGTGCCAAACCACGTGCTTAACGTCCTGCGTATGAGAGCTGAGGGTCACACACCTCGGTaGCCCAGATGCGAATTTTAC | + |
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Preference number: 4 (lower is better) Translates to: LLARVPNHVLNVLRMRAEGHTPR*PRCEFY Trigger: GTAAAATTCGCATCTGGGGCACCGAGGTGTGTGACC...CTCAGCTCTCATACGCAGGACGTTAAGCACGTGGTTTGGCACCCGAGCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172636.2 |
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| 3UTR CAA 72 bp | CACACGCTCTTATCTCTGCTGCAGGTAGCCAAGAGGTaGCCAGATGGGGCCCAAGCCACTGACTTGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: HTLLSLLQVAKR*PDGAQATDLTS Trigger: TGAGGTCAAGTCAGTGGCTTGGGCCCCATCTGGCAACCTCTTGGCTACCTGCAGCAGAGATAAGAGCGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172636.2 |
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| CDS-3UTR GCA 90 bp | AACTTTAATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGCAGCGGGAATCCGGGTaGGCCGGGACGCGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NFNTIYCCSVALSNGFLKQRESG*AGTRLC Trigger: GCAGAGCCGCGTCCCGGCGCACCCGGATTCCCGCTG...CTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTATTAAAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGAAGGCTACCTCCCCATCATCACTACAAGAGGCCAGGAGCCCTGGCTCCTCATCCCCTTCTTCCTaGTATAGCTTCACTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQKATSPSSLQEARSPGSSSPSS*YSFTVS Trigger: TGACACAGTGAAGCTATACCAGGAAGAAGGGGATGA...GGAGCCAGGGCTCCTGGCCTCTTGTAGTGATGATGGGGAGGTAGCCTTCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
||
| CDS-3UTR CCA 90 bp | CAGACCACTAGTCAACGCTATGTCTCCACTGTCTGCAAAAATCTAAGGTCACAGCCAGCCGCTGGCCGCTaGGATCAAAGGCTATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTTSQRYVSTVCKNLRSQPAAGR*DQRLCS Trigger: GGAGCATAGCCTTTGATCCCAGCGGCCAGCGGCTGG...CTGTGACCTTAGATTTTTGCAGACAGTGGAGACATAGCGTTGACTAGTGGTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR CCA 90 bp | AGGATGCTTCAGGTCTTCTTGACGACTAGAAGTCTTAGGACGTTTTCTGTGGGACCAGCCGCTGGCCGCTaGGATCAAAGGCTATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RMLQVFLTTRSLRTFSVGPAAGR*DQRLCS Trigger: GGAGCATAGCCTTTGATCCCAGCGGCCAGCGGCTGG...TCCCACAGAAAACGTCCTAAGACTTCTAGTCGTCAAGAAGACCTGAAGCATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR TCA 90 bp | ATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGAAGGGAAACAGTGCAAACAGTGGACTCATaGCCTTCGAGGGTGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ILLFCGSLQWLPQGRETVQTVDS*PSRVAQ Trigger: CTGTGCCACCCTCGAAGGTCATGAGTCCACTGTTTG...CACTGTTTCCCTTCCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR GCA 90 bp | GAGCATGTCAACTTCAGGTTGGGAAAGAAGAGTTTCCAAATCACTGTGGCTGTCAGAGAGAAGGTGGGCTaGTGTGGGTCTGAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EHVNFRLGKKSFQITVAVREKVG*CGSEPG Trigger: CCCAGGCTCAGACCCACAGCAGCCCACCTTCTCTCT...GACAGCCACAGTGATTTGGAAACTCTTCTTTCCCAACCTGAAGTTGACATGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR TCA 90 bp | GTCAACTTCAGGTTGGGAAAGAAGAGTTTCCAAATCACTGTGGCTGTCCTTAGAGGGCTGCTGTGGGTCTaGGCCTGGGTCTTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VNFRLGKKSFQITVAVLRGLLWV*AWVFLK Trigger: TTTGAGGAAGACCCAGGCTCAGACCCACAGCAGCCC...TCTAAGGACAGCCACAGTGATTTGGAAACTCTTCTTTCCCAACCTGAAGTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR GCA 90 bp | GTAGCAACTGTCCAACTGTTTTTCCTCAAGACTATCTTCATTTCAGAGGGGCTAGTCATCACTGCAAGATaGCAGCCGCTGGCCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VATVQLFFLKTIFISEGLVITAR*QPLAAG Trigger: CCCAGCGGCCAGCGGCTGGCATCTTGCAGTGATGAC...TAGCCCCTCTGAAATGAAGATAGTCTTGAGGAAAAACAGTTGGACAGTTGCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR CCA 90 bp | GAGCATGTCAACTTCAGGTTGGGAAAGAAGAGTTTCCAAATCACTGTGGCTGTCGGAGCCCTGGCTCCTTaGGATTCCAAGCCACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: EHVNFRLGKKSFQITVAVGALAP*DSKPHS Trigger: ACTGTGTGGCTTGGAATCCCAAGGAGCCAGGGCTCC...GACAGCCACAGTGATTTGGAAACTCTTCTTTCCCAACCTGAAGTTGACATGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR TCA 90 bp | AGGTCAAGGATGCTTCAGGTCTTCTTGACGACTAGAAGTCTTAGGACGTTTTCTTCCTGGGAATGGGCCTaGCGAAGATGGGCTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSRMLQVFLTTRSLRTFSSWEWA*RRWAVR Trigger: TCTGACAGCCCATCTTCGTCAGGCCCATTCCCAGGA...AGAAAACGTCCTAAGACTTCTAGTCGTCAAGAAGACCTGAAGCATCCTTGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR GCA 90 bp | TACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGAAGGGAATGGGGTCAGAGCCACTaGATGCCACCCCTTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YNILLFCGSLQWLPQGREWGQSH*MPPLVH Trigger: ATGAACAAGGGGTGGCATGCAGTGGCTCTGACCCCA...TTCCCTTCCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR CCA 90 bp | CCCATCATCACTACAAGAGGCCAGGAGCCCTGGCTCCTTGGGATTCCAAGCCACCACTCAAAGTCATCCTaGTTCTTCTTCCAAATACAA | + |
|
Preference number: 4 (lower is better) Translates to: PIITTRGQEPWLLGIPSHHSKSS*FFFQIQ Trigger: TTGTATTTGGAAGAAGAACCAGGATGACTTTGAGTG...GTGGCTTGGAATCCCAAGGAGCCAGGGCTCCTGGCCTCTTGTAGTGATGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCAAGGATGCTTCAGGTCTTCTTGACGACTAGAAGTCTTAGGACGTTTTCTCTGTCAGAGAGAAGGTaGGCTGCTGTGGGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSRMLQVFLTTRSLRTFSLSERR*AAVGLS Trigger: GCTCAGACCCACAGCAGCCCACCTTCTCTCTGACAG...AGAAAACGTCCTAAGACTTCTAGTCGTCAAGAAGACCTGAAGCATCCTTGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR TCA 90 bp | ATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGAAGGGACCCAAGCCACTGACTTaGCCTCATTTTCATGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IQYTAVLWLSPMASSRKGPKPLT*PHFHGP Trigger: AGGGCCATGAAAATGAGGTCAAGTCAGTGGCTTGGG...TCCCTTCCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR TCA 90 bp | ATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGAAGGGATGGGGCCCAAGCCACTaGCTTGACCTCATTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: IQYTAVLWLSPMASSRKGWGPSH*LDLIFM Trigger: CATGAAAATGAGGTCAAGTCAGTGGCTTGGGCCCCA...TCCCTTCCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTAATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGCCTCGGTGCCCCAGATaGGAATTTTACGGTCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLIQYTAVLWLSPMASSRPRCPR*EFYGRL Trigger: GAGGCGACCGTAAAATTCGCATCTGGGGCACCGAGG...CCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTATTAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAGCCTGGGTCTTCCTCAAACACTCGGATGGCATCATCTCCACAAGCTGTATTGACCTCATTTTCATaGCCCTCAAGAGTGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SEPGSSSNTRMASSPQAVLTSFS*PSRVVT Trigger: TGTGACCACTCTTGAGGGCCATGAAAATGAGGTCAA...TACAGCTTGTGGAGATGATGCCATCCGAGTGTTTGAGGAAGACCCAGGCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCAAGGATGCTTCAGGTCTTCTTGACGACTAGAAGTCTTAGGACGTTTTCTCCCAAGCCACTGACTTaGCCTCATTTTCATGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSRMLQVFLTTRSLRTFSPKPLT*PHFHGP Trigger: AGGGCCATGAAAATGAGGTCAAGTCAGTGGCTTGGG...AGAAAACGTCCTAAGACTTCTAGTCGTCAAGAAGACCTGAAGCATCCTTGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR GCA 90 bp | AACTTTAATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGCCACCCCTTGTTCATTaGCCGGTAGATACTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NFNTIYCCSVALSNGFLKPPLVH*PVDTGA Trigger: GGCGCCAGTATCTACCGGGCAATGAACAAGGGGTGG...CTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTATTAAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR CCA 90 bp | CAATGGCTTCCTCAAGGAAGGGAAACAGTGAATAGTCCTGAGCAAAATGAAGGTCGTCGTAAATGGTCCTaGTGTGGAAGCCCGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QWLPQGRETVNSPEQNEGRRKWS*CGSPTK Trigger: CTTTGTCGGGCTTCCACACCAGGACCATTTACGACG...ACCTTCATTTTGCTCAGGACTATTCACTGTTTCCCTTCCTTGAGGAAGCCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR CCA 90 bp | ATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGAAGGGACCTCAAACACTCGGATaGCATCATCTCCACAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQYTAVLWLSPMASSRKGPQTLG*HHLHKL Trigger: CAGCTTGTGGAGATGATGCCATCCGAGTGTTTGAGG...TCCCTTCCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR TCA 90 bp | ACTTTAATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGTTCCTAACGGTGCGCTaGTGGCCTTCAGAAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TLIQYTAVLWLSPMASSRFLTVR*WPSERT Trigger: TGTCCTTTCTGAAGGCCATCAGCGCACCGTTAGGAA...CCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTATTAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTAGGTGGAACTTTCTCATTTGTCAGTATCAGAAATGGTCTCAATGTCAATTCCAAGCCACACAGTTaGCATCCTGGGAATGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGGTFSFVSIRNGLNVNSKPHS*HPGNGP Trigger: AGGCCCATTCCCAGGATGTCAACTGTGTGGCTTGGA...ATTGACATTGAGACCATTTCTGATACTGACAAATGAGAAAGTTCCACCTAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR GCA 90 bp | GTAGCAACTGTCCAACTGTTTTTCCTCAAGACTATCTTCATTTCAGAGGGGCTAAGCTGTCACCCTCGGTaGCCCAGATGCGAATTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VATVQLFFLKTIFISEGLSCHPR*PRCEFY Trigger: GTAAAATTCGCATCTGGGGCACCGAGGGTGACAGCT...TAGCCCCTCTGAAATGAAGATAGTCTTGAGGAAAAACAGTTGGACAGTTGCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR GCA 90 bp | AGGATGCTTCAGGTCTTCTTGACGACTAGAAGTCTTAGGACGTTTTCTGTGGGACAGAAAGGACAGACTTaGAAATCCAGCTGTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RMLQVFLTTRSLRTFSVGQKGQT*KSSCHP Trigger: AGGGTGACAGCTGGATTTGCAAGTCTGTCCTTTCTG...TCCCACAGAAAACGTCCTAAGACTTCTAGTCGTCAAGAAGACCTGAAGCATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR GCA 90 bp | GTCAACTTCAGGTTGGGAAAGAAGAGTTTCCAAATCACTGTGGCTGTCCTTAGAGGAAGCCCGACAAAGTaGAGATACATTTCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VNFRLGKKSFQITVAVLRGSPTK*RYISSW Trigger: CCAGCTGGAAATGTATCTGCACTTTGTCGGGCTTCC...TCTAAGGACAGCCACAGTGATTTGGAAACTCTTCTTTCCCAACCTGAAGTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR CCA 90 bp | GTCAACTTCAGGTTGGGAAAGAAGAGTTTCCAAATCACTGTGGCTGTCCTTAGAAGATACATTTCCAGCTaGGGTCAGAGCCACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VNFRLGKKSFQITVAVLRRYISS*GQSHCM Trigger: CATGCAGTGGCTCTGACCCCAGCTGGAAATGTATCT...TCTAAGGACAGCCACAGTGATTTGGAAACTCTTCTTTCCCAACCTGAAGTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR CCA 90 bp | AGGATGCTTCAGGTCTTCTTGACGACTAGAAGTCTTAGGACGTTTTCTGTGGGATCCAAATACAAGTGGTaGCATCAAAGCTGGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RMLQVFLTTRSLRTFSVGSKYKW*HQSWQM Trigger: CATCTGCCAGCTTTGATGCCACCACTTGTATTTGGA...TCCCACAGAAAACGTCCTAAGACTTCTAGTCGTCAAGAAGACCTGAAGCATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR CCA 90 bp | CAATGGCTTCCTCAAGGAAGGGAAACAGTGAATAGTCCTGAGCAAAATGAAGGTCATGGCCCTCAAGAGTaGTCACACACTCAAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QWLPQGRETVNSPEQNEGHGPQE*SHTQSH Trigger: ATGACTTTGAGTGTGTGACCACTCTTGAGGGCCATG...ACCTTCATTTTGCTCAGGACTATTCACTGTTTCCCTTCCTTGAGGAAGCCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR CCA 90 bp | TACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGAAGGGAATCATCCCCTTCTTCCTaGTATAGCTTCACTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YNILLFCGSLQWLPQGRESSPSS*YSFTVS Trigger: TGACACAGTGAAGCTATACCAGGAAGAAGGGGATGA...TTCCCTTCCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTAGGTGGAACTTTCTCATTTGTCAGTATCAGAAATGGTCTCAATGTCAATAAGCAACGTCGTAAATaGTCCTGGTGTGGAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GLGGTFSFVSIRNGLNVNKQRRK*SWCGSP Trigger: CGGGCTTCCACACCAGGACCATTTACGACGTTGCTT...ATTGACATTGAGACCATTTCTGATACTGACAAATGAGAAAGTTCCACCTAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR CCA 90 bp | ACTTTAATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGTGGTGGCATCAAAGCTaGCAGATGCCAGGTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLIQYTAVLWLSPMASSRWWHQS*QMPGNF Trigger: GAAATTACCTGGCATCTGCCAGCTTTGATGCCACCA...CCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTATTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR GCA 90 bp | AACTTTAATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGCAGAAAGGACAGACTTaGAAATCCAGCTGTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: NFNTIYCCSVALSNGFLKQKGQT*KSSCHP Trigger: AGGGTGACAGCTGGATTTGCAAGTCTGTCCTTTCTG...CTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTATTAAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTAGGTGGAACTTTCTCATTTGTCAGTATCAGAAATGGTCTCAATGTCAATTGGTGGCATCAAAGCTaGCAGATGCCAGGTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLGGTFSFVSIRNGLNVNWWHQS*QMPGNF Trigger: GAAATTACCTGGCATCTGCCAGCTTTGATGCCACCA...ATTGACATTGAGACCATTTCTGATACTGACAAATGAGAAAGTTCCACCTAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR CCA 90 bp | ACTTTAATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGTCTTCCAAATACAAGTaGTGGCATCAAAGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLIQYTAVLWLSPMASSRSSKYK*WHQSWQ Trigger: CTGCCAGCTTTGATGCCACCACTTGTATTTGGAAGA...CCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTATTAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR CCA 90 bp | GCATGTTTTAAATGCAAGAACTACTCTAGAATTGGGACAGTGGAGCTTATTCCCTCCAAATACAAGTGGTaGCATCAAAGCTGGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ACFKCKNYSRIGTVELIPSKYKW*HQSWQM Trigger: CATCTGCCAGCTTTGATGCCACCACTTGTATTTGGA...GGGAATAAGCTCCACTGTCCCAATTCTAGAGTAGTTCTTGCATTTAAAACATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS-3UTR CCA 90 bp | AACTTTAATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGTTGACCTCATTTTCATaGCCCTCAAGAGTGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: NFNTIYCCSVALSNGFLKLTSFS*PSRVVT Trigger: TGTGACCACTCTTGAGGGCCATGAAAATGAGGTCAA...CTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTATTAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTAATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGCACTCAAAGTCATCCTaGTTCTTCTTCCAAATACAA | + |
|
Preference number: 4 (lower is better) Translates to: TLIQYTAVLWLSPMASSRHSKSS*FFFQIQ Trigger: TTGTATTTGGAAGAAGAACCAGGATGACTTTGAGTG...CCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTATTAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR CCA 90 bp | CACTGTCTGCAAAAATCTAAGGTCACAGTTGTACAGTGTAAAAAGTTAAGTGAACATGGCCCTCAAGAGTaGTCACACACTCAAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HCLQKSKVTVVQCKKLSEHGPQE*SHTQSH Trigger: ATGACTTTGAGTGTGTGACCACTCTTGAGGGCCATG...TTCACTTAACTTTTTACACTGTACAACTGTGACCTTAGATTTTTGCAGACAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| 3UTR CAA 72 bp | AGCTTGCATGTTTTAAATGCAAGAACTACTCTAGAATaGGGACAGTGGAGCTTATTCCCAATAGTCAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLHVLNARTTLE*GQWSLFPIVKL Trigger: TAACTTGACTATTGGGAATAAGCTCCACTGTCCCAATTCTAGAGTAGTTCTTGCATTTAAAACATGCAAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS GCA 90 bp | TGCATGCCACCCCTTGTTCATTGCCCGGTAGATACTGGCGCCAGATaGGTACAGTTCGGTCATCACTGCAAGATGCCAGCCGCTGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CMPPLVHCPVDTGAR*VQFGHHCKMPAAGR Trigger: GCGGCCAGCGGCTGGCATCTTGCAGTGATGACCGAACTGTACGCATCTGGCGCCAGTATCTACCGGGCAATGAACAAGGGGTGGCATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS CCA 90 bp | ATGCCAGCCGCTGGCCGCTGGGATCAAAGGCTATGCTCCAAACAGTaGACTCATGACCTTCGAGGGTGGCACAGCAGACCCAGTCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: MPAAGRWDQRLCSKQ*THDLRGWHSRPSHP Trigger: GGGATGACTGGGTCTGCTGTGCCACCCTCGAAGGTCATGAGTCCACTGTTTGGAGCATAGCCTTTGATCCCAGCGGCCAGCGGCTGGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTGGGTCTGAGCCTGGGTCTTCCTCAAACACTCGGATGGCATCATCTCCACCAGGTAGCCAAGAGGTaGCCAGATGGGGCCCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVGLSLGLPQTLGWHHLHQVAKR*PDGAQA Trigger: GGCTTGGGCCCCATCTGGCAACCTCTTGGCTACCTG...GTGGAGATGATGCCATCCGAGTGTTTGAGGAAGACCCAGGCTCAGACCCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
||
| CDS TCA 90 bp | CGCTGGCCGCTGGGATCAAAGGCTATGCTCCAAACAGTGGACTCATaGCCTTCGAGGGTGGCACAGCAGACCCAGTCATCCCCTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RWPLGSKAMLQTVDS*PSRVAQQTQSSPSS Trigger: GGAAGAAGGGGATGACTGGGTCTGCTGTGCCACCCTCGAAGGTCATGAGTCCACTGTTTGGAGCATAGCCTTTGATCCCAGCGGCCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
||
| CDS GCA 90 bp | CATCACTGCAAGATGCCAGCCGCTGGCCGCTGGGATCAAAGGCTATaGTCCAAACAGTGGACTCATGACCTTCGAGGGTGGCACAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HHCKMPAAGRWDQRL*SKQWTHDLRGWHSR Trigger: TCTGCTGTGCCACCCTCGAAGGTCATGAGTCCACTGTTTGGAGCATAGCCTTTGATCCCAGCGGCCAGCGGCTGGCATCTTGCAGTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| CDS GCA 90 bp | GGCCTTCAGAAAGGACAGACTTGCAAATCCAGCTGTCACCCTCGGTaGCCCAGATGCGAATTTTACGGTCGCCTCCGCAGGAAGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: GLQKGQTCKSSCHPR*PRCEFYGRLRRKPT Trigger: TGTTGGCTTCCTGCGGAGGCGACCGTAAAATTCGCATCTGGGGCACCGAGGGTGACAGCTGGATTTGCAAGTCTGTCCTTTCTGAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
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| CDS CCA 90 bp | TCAGAGCCACTGCATGCCACCCCTTGTTCATTGCCCGGTAGATACTaGCGCCAGATGCGTACAGTTCGGTCATCACTGCAAGATGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SEPLHATPCSLPGRY*RQMRTVRSSLQDAS Trigger: GCTGGCATCTTGCAGTGATGACCGAACTGTACGCATCTGGCGCCAGTATCTACCGGGCAATGAACAAGGGGTGGCATGCAGTGGCTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS CCA 90 bp | TGGTCCTGGTGTGGAAGCCCGACAAAGTGCAGATACATTTCCAGCTaGGGTCAGAGCCACTGCATGCCACCCCTTGTTCATTGCCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: WSWCGSPTKCRYISS*GQSHCMPPLVHCPV Trigger: TACCGGGCAATGAACAAGGGGTGGCATGCAGTGGCTCTGACCCCAGCTGGAAATGTATCTGCACTTTGTCGGGCTTCCACACCAGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS TCA 90 bp | TCTGCTGCAGGTAGCCAAGAGGTTGCCAGATGGGGCCCAAGCCACTaGCTTGACCTCATTTTCATGGCCCTCAAGAGTGGTCACACACTC | + |
|
Preference number: 5 (lower is better) Translates to: SAAGSQEVARWGPSH*LDLIFMALKSGHTL Trigger: GAGTGTGTGACCACTCTTGAGGGCCATGAAAATGAGGTCAAGTCAGTGGCTTGGGCCCCATCTGGCAACCTCTTGGCTACCTGCAGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
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| CDS GCA 90 bp | ACCAAGCAACGTCGTAAATGGTCCTGGTGTGGAAGCCCGACAAAGTaGAGATACATTTCCAGCTGGGGTCAGAGCCACTGCATGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: TKQRRKWSWCGSPTK*RYISSWGQSHCMPP Trigger: GGGTGGCATGCAGTGGCTCTGACCCCAGCTGGAAATGTATCTGCACTTTGTCGGGCTTCCACACCAGGACCATTTACGACGTTGCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS CCA 90 bp | TGCGTACAGTTCGGTCATCACTGCAAGATGCCAGCCGCTGGCCGCTaGGATCAAAGGCTATGCTCCAAACAGTGGACTCATGACCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: CVQFGHHCKMPAAGR*DQRLCSKQWTHDLR Trigger: TCGAAGGTCATGAGTCCACTGTTTGGAGCATAGCCTTTGATCCCAGCGGCCAGCGGCTGGCATCTTGCAGTGATGACCGAACTGTACGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| CDS CCA 90 bp | CCAAGGCCCCTGTCAGCTGACACCAAGCAACGTCGTAAATGGTCCTaGTGTGGAAGCCCGACAAAGTGCAGATACATTTCCAGCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PRPLSADTKQRRKWS*CGSPTKCRYISSWG Trigger: ACCCCAGCTGGAAATGTATCTGCACTTTGTCGGGCTTCCACACCAGGACCATTTACGACGTTGCTTGGTGTCAGCTGACAGGGGCCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS-3UTR CAA 90 bp | TCTTCCTCAAACACTCGGATGGCATCATCTCCACAAGCTGTAGCCAAGGCCCCTCTGACACCTTGTTCATaGCCCGGTAGATACTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSNTRMASSPQAVAKAPLTPCS*PGRYWR Trigger: GCGCCAGTATCTACCGGGCAATGAACAAGGTGTCAG...AGGGGCCTTGGCTACAGCTTGTGGAGATGATGCCATCCGAGTGTTTGAGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| CDS CCA 90 bp | GATCAAAGGCTATGCTCCAAACAGTGGACTCATGACCTTCGAGGGTaGCACAGCAGACCCAGTCATCCCCTTCTTCCTGGTATAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DQRLCSKQWTHDLRG*HSRPSHPLLPGIAS Trigger: TGAAGCTATACCAGGAAGAAGGGGATGACTGGGTCTGCTGTGCCACCCTCGAAGGTCATGAGTCCACTGTTTGGAGCATAGCCTTTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| CDS-3UTR CAA 90 bp | GAGCATGTCAACTTCAGGTTGGGAAAGAAGAGTTTCCAAATCACTGTGGCTGTCAGGAGCCCTGGCTCCTaGGGATTCCAAGCCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: EHVNFRLGKKSFQITVAVRSPGS*GFQATQ Trigger: CTGTGTGGCTTGGAATCCCAAGGAGCCAGGGCTCCT...GACAGCCACAGTGATTTGGAAACTCTTCTTTCCCAACCTGAAGTTGACATGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS GCA 90 bp | CTGGTTCTTCTTCCAAATACAAGTGGTGGCATCAAAGCTGGCAGATaGCAGGTAATTTCCACACGGGGACCAGGCCACTTTCCTAACGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVLLPNTSGGIKAGR*QVISTRGPGHFPNG Trigger: ACCGTTAGGAAAGTGGCCTGGTCCCCGTGTGGAAATTACCTGGCATCTGCCAGCTTTGATGCCACCACTTGTATTTGGAAGAAGAACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
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| CDS CCA 90 bp | AGTCATCCTGGTTCTTCTTCCAAATACAAGTGGTGGCATCAAAGCTaGCAGATGCCAGGTAATTTCCACACGGGGACCAGGCCACTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHPGSSSKYKWWHQS*QMPGNFHTGTRPLS Trigger: GGAAAGTGGCCTGGTCCCCGTGTGGAAATTACCTGGCATCTGCCAGCTTTGATGCCACCACTTGTATTTGGAAGAAGAACCAGGATGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
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| CDS-3UTR CAA 90 bp | AGGATGCTTCAGGTCTTCTTGACGACTAGAAGTCTTAGGACGTTTTCTGTGGGAGCCCAAGCCACTGACTaGACCTCATTTTCATGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RMLQVFLTTRSLRTFSVGAQATD*TSFSWP Trigger: GGGCCATGAAAATGAGGTCAAGTCAGTGGCTTGGGC...TCCCACAGAAAACGTCCTAAGACTTCTAGTCGTCAAGAAGACCTGAAGCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| CDS-3UTR CAA 90 bp | AATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGAAGGGGCCCAAGCCACTGACTaGACCTCATTTTCATGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NTIYCCSVALSNGFLKEGAQATD*TSFSWP Trigger: GGGCCATGAAAATGAGGTCAAGTCAGTGGCTTGGGC...CCCTTCCTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| CDS CCA 90 bp | TCACACACTCAAAGTCATCCTGGTTCTTCTTCCAAATACAAGTGGTaGCATCAAAGCTGGCAGATGCCAGGTAATTTCCACACGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SHTQSHPGSSSKYKW*HQSWQMPGNFHTGT Trigger: GGTCCCCGTGTGGAAATTACCTGGCATCTGCCAGCTTTGATGCCACCACTTGTATTTGGAAGAAGAACCAGGATGACTTTGAGTGTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
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| CDS CCA 90 bp | TGGTCACACACTCAAAGTCATCCTGGTTCTTCTTCCAAATACAAGTaGTGGCATCAAAGCTGGCAGATGCCAGGTAATTTCCACACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WSHTQSHPGSSSKYK*WHQSWQMPGNFHTG Trigger: CCCCGTGTGGAAATTACCTGGCATCTGCCAGCTTTGATGCCACCACTTGTATTTGGAAGAAGAACCAGGATGACTTTGAGTGTGTGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
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| CDS-3UTR CAA 90 bp | AACTTTAATACAATATACTGCTGTTCTGTGGCTCTCTCCAATGGCTTCCTCAAGGCCACCCCTTGTTCATaGCCCGGTAGATACTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: NFNTIYCCSVALSNGFLKATPCS*PGRYWR Trigger: GCGCCAGTATCTACCGGGCAATGAACAAGGGGTGGC...CTTGAGGAAGCCATTGGAGAGAGCCACAGAACAGCAGTATATTGTATTAAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS-3UTR CAA 90 bp | CTTCATTTCAGAGGGGCTAGGTGGAACTTTCTCATTTGTCAGTATCAGAAATGGTTCCAAGCCACACAGTaGACATCCTGGGAATGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LHFRGARWNFLICQYQKWFQATQ*TSWEWA Trigger: GGCCCATTCCCAGGATGTCAACTGTGTGGCTTGGAA...CCATTTCTGATACTGACAAATGAGAAAGTTCCACCTAGCCCCTCTGAAATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS-3UTR CAA 90 bp | CACTGTCTGCAAAAATCTAAGGTCACAGTTGTACAGTGTAAAAAGTTAAGTGAACAGGTAGCCAAGAGGTaGCCAGATGGGGCCCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HCLQKSKVTVVQCKKLSEQVAKR*PDGAQA Trigger: GGCTTGGGCCCCATCTGGCAACCTCTTGGCTACCTG...TTCACTTAACTTTTTACACTGTACAACTGTGACCTTAGATTTTTGCAGACAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS GCA 72 bp | GCGCCAGATGCGTACAGTTCGGTCATCACTGCAAGATaGCAGCCGCTGGCCGCTGGGATCAAAGGCTATGCT | + |
|
Preference number: 6 (lower is better) Translates to: APDAYSSVITAR*QPLAAGIKGYA Trigger: AGCATAGCCTTTGATCCCAGCGGCCAGCGGCTGGCATCTTGCAGTGATGACCGAACTGTACGCATCTGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| CDS CCA 72 bp | GCTGGCCGCTGGGATCAAAGGCTATGCTCCAAACAGTaGACTCATGACCTTCGAGGGTGGCACAGCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: AGRWDQRLCSKQ*THDLRGWHSRP Trigger: GGGTCTGCTGTGCCACCCTCGAAGGTCATGAGTCCACTGTTTGGAGCATAGCCTTTGATCCCAGCGGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| CDS GCA 72 bp | AAGATGCCAGCCGCTGGCCGCTGGGATCAAAGGCTATaGTCCAAACAGTGGACTCATGACCTTCGAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: KMPAAGRWDQRL*SKQWTHDLRGW Trigger: CCACCCTCGAAGGTCATGAGTCCACTGTTTGGAGCATAGCCTTTGATCCCAGCGGCCAGCGGCTGGCATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| CDS TCA 72 bp | CCACACGGGGACCAGGCCACTTTCCTAACGGTGCGCTaGTGGCCTTCAGAAAGGACAGACTTGCAAATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PHGDQATFLTVR*WPSERTDLQIQ Trigger: CTGGATTTGCAAGTCTGTCCTTTCTGAAGGCCATCAGCGCACCGTTAGGAAAGTGGCCTGGTCCCCGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
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| CDS GCA 72 bp | ACTTGCAAATCCAGCTGTCACCCTCGGTGCCCCAGATaGGAATTTTACGGTCGCCTCCGCAGGAAGCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: TCKSSCHPRCPR*EFYGRLRRKPT Trigger: TGTTGGCTTCCTGCGGAGGCGACCGTAAAATTCGCATCTGGGGCACCGAGGGTGACAGCTGGATTTGCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
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| CDS GCA 72 bp | AAAGGACAGACTTGCAAATCCAGCTGTCACCCTCGGTaGCCCAGATGCGAATTTTACGGTCGCCTCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KGQTCKSSCHPR*PRCEFYGRLRR Trigger: CCTGCGGAGGCGACCGTAAAATTCGCATCTGGGGCACCGAGGGTGACAGCTGGATTTGCAAGTCTGTCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
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| CDS GCA 72 bp | CCCCTTGTTCATTGCCCGGTAGATACTGGCGCCAGATaGGTACAGTTCGGTCATCACTGCAAGATGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLVHCPVDTGAR*VQFGHHCKMPA Trigger: GGCTGGCATCTTGCAGTGATGACCGAACTGTACGCATCTGGCGCCAGTATCTACCGGGCAATGAACAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS CCA 72 bp | CGTACAGTTCGGTCATCACTGCAAGATGCCAGCCGCTaGCCGCTGGGATCAAAGGCTATGCTCCAAACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RTVRSSLQDASR*PLGSKAMLQTV Trigger: CACTGTTTGGAGCATAGCCTTTGATCCCAGCGGCCAGCGGCTGGCATCTTGCAGTGATGACCGAACTGTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| CDS TCA 72 bp | GGTAGCCAAGAGGTTGCCAGATGGGGCCCAAGCCACTaGCTTGACCTCATTTTCATGGCCCTCAAGAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSQEVARWGPSH*LDLIFMALKSG Trigger: ACCACTCTTGAGGGCCATGAAAATGAGGTCAAGTCAGTGGCTTGGGCCCCATCTGGCAACCTCTTGGCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
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| CDS TCA 72 bp | CTGGGATCAAAGGCTATGCTCCAAACAGTGGACTCATaGCCTTCGAGGGTGGCACAGCAGACCCAGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LGSKAMLQTVDS*PSRVAQQTQSS Trigger: GGATGACTGGGTCTGCTGTGCCACCCTCGAAGGTCATGAGTCCACTGTTTGGAGCATAGCCTTTGATCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| CDS GCA 72 bp | CGTCGTAAATGGTCCTGGTGTGGAAGCCCGACAAAGTaGAGATACATTTCCAGCTGGGGTCAGAGCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRKWSWCGSPTK*RYISSWGQSHC Trigger: GCAGTGGCTCTGACCCCAGCTGGAAATGTATCTGCACTTTGTCGGGCTTCCACACCAGGACCATTTACGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS GCA 72 bp | CACCTTGTTCATTGCCCGGTAGATACTGGCGCCAGATaGGTACAGTTCGGTCATCACTGCAAGATGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HLVHCPVDTGAR*VQFGHHCKMPA Trigger: GGCTGGCATCTTGCAGTGATGACCGAACTGTACGCATCTGGCGCCAGTATCTACCGGGCAATGAACAAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174030.8 |
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| CDS CCA 72 bp | CTATGCTCCAAACAGTGGACTCATGACCTTCGAGGGTaGCACAGCAGACCCAGTCATCCCCTTCTTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LCSKQWTHDLRG*HSRPSHPLLPG Trigger: ACCAGGAAGAAGGGGATGACTGGGTCTGCTGTGCCACCCTCGAAGGTCATGAGTCCACTGTTTGGAGCATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 |
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| CDS CCA 72 bp | CTGCATGCCACCCCTTGTTCATTGCCCGGTAGATACTaGCGCCAGATGCGTACAGTTCGGTCATCACTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LHATPCSLPGRY*RQMRTVRSSLQ Trigger: TTGCAGTGATGACCGAACTGTACGCATCTGGCGCCAGTATCTACCGGGCAATGAACAAGGGGTGGCATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS CCA 72 bp | AGGCCCCTGTCAGCTGACACCAAGCAACGTCGTAAATaGTCCTGGTGTGGAAGCCCGACAAAGTGCAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: RPLSADTKQRRK*SWCGSPTKCRY Trigger: GTATCTGCACTTTGTCGGGCTTCCACACCAGGACCATTTACGACGTTGCTTGGTGTCAGCTGACAGGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS CCA 72 bp | TGTGGAAGCCCGACAAAGTGCAGATACATTTCCAGCTaGGGTCAGAGCCACTGCATGCCACCCCTTGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CGSPTKCRYISS*GQSHCMPPLVH Trigger: ATGAACAAGGGGTGGCATGCAGTGGCTCTGACCCCAGCTGGAAATGTATCTGCACTTTGTCGGGCTTCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS GCA 72 bp | AAGTGCAGATACATTTCCAGCTGGGGTCAGAGCCACTaGATGCCACCCCTTGTTCATTGCCCGGTAGATACT | + |
|
Preference number: 6 (lower is better) Translates to: KCRYISSWGQSH*MPPLVHCPVDT Trigger: AGTATCTACCGGGCAATGAACAAGGGGTGGCATGCAGTGGCTCTGACCCCAGCTGGAAATGTATCTGCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
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| CDS GCA 72 bp | CTTCCAAATACAAGTGGTGGCATCAAAGCTGGCAGATaGCAGGTAATTTCCACACGGGGACCAGGCCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LPNTSGGIKAGR*QVISTRGPGHF Trigger: AAAGTGGCCTGGTCCCCGTGTGGAAATTACCTGGCATCTGCCAGCTTTGATGCCACCACTTGTATTTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
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| CDS CCA 72 bp | GGTTCTTCTTCCAAATACAAGTGGTGGCATCAAAGCTaGCAGATGCCAGGTAATTTCCACACGGGGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSSSKYKWWHQS*QMPGNFHTGTR Trigger: CCTGGTCCCCGTGTGGAAATTACCTGGCATCTGCCAGCTTTGATGCCACCACTTGTATTTGGAAGAAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
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| CDS CCA 72 bp | CTGTCAGCTGACACCAAGCAACGTCGTAAATGGTCCTaGTGTGGAAGCCCGACAAAGTGCAGATACATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSADTKQRRKWS*CGSPTKCRYIS Trigger: GGAAATGTATCTGCACTTTGTCGGGCTTCCACACCAGGACCATTTACGACGTTGCTTGGTGTCAGCTGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003759.11 |
||
| CDS CCA 72 bp | TGGCCCTCAAGAGTGGTCACACACTCAAAGTCATCCTaGTTCTTCTTCCAAATACAAGTGGTGGCATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: WPSRVVTHSKSS*FFFQIQVVASK Trigger: CTTTGATGCCACCACTTGTATTTGGAAGAAGAACCAGGATGACTTTGAGTGTGTGACCACTCTTGAGGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
||
| CDS CCA 72 bp | CAAAGTCATCCTGGTTCTTCTTCCAAATACAAGTGGTaGCATCAAAGCTGGCAGATGCCAGGTAATTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QSHPGSSSKYKW*HQSWQMPGNFH Trigger: GTGGAAATTACCTGGCATCTGCCAGCTTTGATGCCACCACTTGTATTTGGAAGAAGAACCAGGATGACTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
||
| CDS CCA 72 bp | ACTCAAAGTCATCCTGGTTCTTCTTCCAAATACAAGTaGTGGCATCAAAGCTGGCAGATGCCAGGTAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: TQSHPGSSSKYK*WHQSWQMPGNF Trigger: GAAATTACCTGGCATCTGCCAGCTTTGATGCCACCACTTGTATTTGGAAGAAGAACCAGGATGACTTTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003759.11 ENSMUST00000174030.8 ENSMUST00000174863.8 |
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