Pregenerated sensors for CHUK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025199Ensembl transcript IDs: ENSMUST00000026217.11, ENSMUST00000119591.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGTTTCAGAATGAGAACTGTTCAGATTTTAGAAAGGTAATTCAGTaGATACGCCACACTACATCAACCTTCAAGAGAGCCTGTGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: MFQNENCSDFRKVIQ*IRHTTSTFKRACGS Trigger: GCTGCCACAGGCTCTCTTGAAGGTTGATGTAGTGTGGCGTATGCACTGAATTACCTTTCTAAAATCTGAACAGTTCTCATTCTGAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| 3UTR-3UTR CCA 90 bp | GCATACGCCACACTACATCAACCTTCAAGAGAGCCTGTGGCAGCACATCCCAATCTGGTAAGTGAGGAATaGCTTCAGCAAGTAAAGATG | + |
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Preference number: 2 (lower is better) Translates to: AYATLHQPSREPVAAHPNLVSEE*LQQVKM Trigger: CATCTTTACTTGCTGAAGCCATTCCTCACTTACCAG...ATTGGGATGTGCTGCCACAGGCTCTCTTGAAGGTTGATGTAGTGTGGCGTATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| 3UTR-3UTR TCA 90 bp | AACCGCAGTCTTTTATCTGAAACCCTTAAGTCTAGATGTTTCAGAATGAGAACTATGAAGAACACTTGCTaGGAGCAACACAAGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: NRSLLSETLKSRCFRMRTMKNTC*EQHKEA Trigger: AGCCTCCTTGTGTTGCTCTCAGCAAGTGTTCTTCAT...AGTTCTCATTCTGAAACATCTAGACTTAAGGGTTTCAGATAAAAGACTGCGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTAAGTTATTTAACATAAGGCAGAGAACCGCAGTCTTTTATCTGAAACCCCCATGTTGGGCCTTATaGCGAAAATTTAGGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SSKLFNIRQRTAVFYLKPPCWAL*RKFRPL Trigger: TAAAGGCCTAAATTTTCGGCATAAGGCCCAACATGG...GGGTTTCAGATAAAAGACTGCGGTTCTCTGCCTTATGTTAAATAACTTAGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| 3UTR-3UTR GCA 90 bp | CATAAATCAATGAATATTCACACTAAATGGGATAAGCAGATCCAGTGTCAGATCCCATGTTGGGCCTTATaGCGAAAATTTAGGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: HKSMNIHTKWDKQIQCQIPCWAL*RKFRPL Trigger: TAAAGGCCTAAATTTTCGGCATAAGGCCCAACATGG...GATCTGACACTGGATCTGCTTATCCCATTTAGTGTGAATATTCATTGATTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGATCCAGTGTCAGATCAGAATAGATACCTTGTTTTCAGAACTTGGATTCTGTTACAGATAAAGGAATaGAGACCCTTTGGAATTTGT | + |
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Preference number: 2 (lower is better) Translates to: ADPVSDQNRYLVFRTWILLQIKE*RPFGIC Trigger: ACAAATTCCAAAGGGTCTGCATTCCTTTATCTGTAA...CAGAATCCAAGTTCTGAAAACAAGGTATCTATTCTGATCTGACACTGGATCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| 3UTR-3UTR CCA 90 bp | CTTACACAGGAAAAGGACTCTATTAAATGTGTGATTAAAGATGGGATTCATCTGACTTCAAATGAACACTaGGTGAATTTTTCATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LTQEKDSIKCVIKDGIHLTSNEH*VNFSFL Trigger: CAGGAATGAAAAATTCACCCAGTGTTCATTTGAAGT...CAGATGAATCCCATCTTTAATCACACATTTAATAGAGTCCTTTTCCTGTGTAAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| 3UTR CCA 72 bp | CATACGCCACACTACATCAACCTTCAAGAGAGCCTGTaGCAGCACATCCCAATAATCAAACACATAAATCAA | + |
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Preference number: 3 (lower is better) Translates to: HTPHYINLQESL*QHIPIIKHINQ Trigger: TTGATTTATGTGTTTGATTATTGGGATGTGCTGCCACAGGCTCTCTTGAAGGTTGATGTAGTGTGGCGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| 3UTR-3UTR CAA 90 bp | CATAAATCAATGAATATTCACACTAAATGGGATAAGCAGATCCAGTGTCAGATCTGCCATGAAGAACACTaGCTGAGAGCAACACAAGGA | + |
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Preference number: 3 (lower is better) Translates to: HKSMNIHTKWDKQIQCQICHEEH*LRATQG Trigger: TCCTTGTGTTGCTCTCAGCAAGTGTTCTTCATGGCA...GATCTGACACTGGATCTGCTTATCCCATTTAGTGTGAATATTCATTGATTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTCTAAGTTATTTAACATAAGGCAGAGAACCGCAGTCTTTTATCTGAAACCCGAAGAGCAATTTTACTaGTCAGCAGTCTCTTCCACA | + |
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Preference number: 3 (lower is better) Translates to: SSKLFNIRQRTAVFYLKPEEQFY*SAVSST Trigger: TGTGGAAGAGACTGCTGACAAGTAAAATTGCTCTTC...GGGTTTCAGATAAAAGACTGCGGTTCTCTGCCTTATGTTAAATAACTTAGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| 3UTR CCA 72 bp | AATACATATACATATAGCACACAACACAATTCATTATaGTCAGCTGATATCAAAGGCACAAAAGTCCAACCC | + |
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Preference number: 3 (lower is better) Translates to: NTYTYSTQHNSL*SADIKGTKVQP Trigger: GGGTTGGACTTTTGTGCCTTTGATATCAGCTGACCATAATGAATTGTGTTGTGTGCTATATGTATATGTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | AGAACACTTGCTGAGAGCAACACAAGGAGGCTGGGCTTAGTCTTCAGGAAGAGCGGTGCTGGTACAGACTaGCGTTCCCGAAACCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: RTLAESNTRRLGLVFRKSGAGTD*RSRNRR Trigger: CCGGCGGTTTCGGGAACGTCAGTCTGTACCAGCACC...GCTCTTCCTGAAGACTAAGCCCAGCCTCCTTGTGTTGCTCTCAGCAAGTGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | CAACACAAGGAGGCTGGGCTTAGTCTTCAGGAAGAGCAATTTTACTTGTCAGCAGGTGCTGGTACAGACTaGCGTTCCCGAAACCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: QHKEAGLSLQEEQFYLSAGAGTD*RSRNRR Trigger: CCGGCGGTTTCGGGAACGTCAGTCTGTACCAGCACC...TGCTGACAAGTAAAATTGCTCTTCCTGAAGACTAAGCCCAGCCTCCTTGTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | AGAACACTTGCTGAGAGCAACACAAGGAGGCTGGGCTTAGTCTTCAGGAAGAGCCCATCTAGAACACACTaGGAGGCTGGTTTCCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: RTLAESNTRRLGLVFRKSPSRTH*EAGFRG Trigger: TCCTCGGAAACCAGCCTCTCAGTGTGTTCTAGATGG...GCTCTTCCTGAAGACTAAGCCCAGCCTCCTTGTGTTGCTCTCAGCAAGTGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | GCATACGCCACACTACATCAACCTTCAAGAGAGCCTGTGGCAGCACATCCCAATAGAAATCCCTGTCTCTaGCAGAAGCTCCTGAGAACC | + |
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Preference number: 4 (lower is better) Translates to: AYATLHQPSREPVAAHPNRNPCL*QKLLRT Trigger: GGTTCTCAGGAGCTTCTGTCAGAGACAGGGATTTCT...ATTGGGATGTGCTGCCACAGGCTCTCTTGAAGGTTGATGTAGTGTGGCGTATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | CAACACAAGGAGGCTGGGCTTAGTCTTCAGGAAGAGCAATTTTACTTGTCAGCAAGGGGGCAGCCATGCTaGTACTGGAGGGGTTACTGT | + |
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Preference number: 4 (lower is better) Translates to: QHKEAGLSLQEEQFYLSARGQPC*YWRGYC Trigger: ACAGTAACCCCTCCAGTATCAGCATGGCTGCCCCCT...TGCTGACAAGTAAAATTGCTCTTCCTGAAGACTAAGCCCAGCCTCCTTGTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR CCA 90 bp | AGAACACTTGCTGAGAGCAACACAAGGAGGCTGGGCTTAGTCTTCAGGAAGAGCAACACACTGAGAGGCTaGTTTCCGAGGATCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: RTLAESNTRRLGLVFRKSNTLRG*FPRIQR Trigger: TCTCTGGATCCTCGGAAACCAGCCTCTCAGTGTGTT...GCTCTTCCTGAAGACTAAGCCCAGCCTCCTTGTGTTGCTCTCAGCAAGTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | CAAGCTACTGTGCTTGTAAAGTCACTCGTAGTTTCCGATCACAGCCATCTCCTCGACCAAACAGCTCCTTaGGAACACGGTCCTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: QATVLVKSLVVSDHSHLLDQTAP*EHGPDS Trigger: AGAGTCAGGACCGTGTTCTCAAGGAGCTGTTTGGTC...GAGGAGATGGCTGTGATCGGAAACTACGAGTGACTTTACAAGCACAGTAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR GCA 90 bp | GTGCTTGTAAAGTCACTCGTAGTTTCCGATCACAGCCATCTCCTCACGGACTGGCTGGAGGGGTTACTGTaGCTTCTAGACTGTATCCTA | + |
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Preference number: 4 (lower is better) Translates to: VLVKSLVVSDHSHLLTDWLEGLL*LLDCIL Trigger: TAGGATACAGTCTAGAAGGCACAGTAACCCCTCCAG...CCAGTCCGTGAGGAGATGGCTGTGATCGGAAACTACGAGTGACTTTACAAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | GCATACGCCACACTACATCAACCTTCAAGAGAGCCTGTGGCAGCACATCCCAATGGTCCAACTTTTTCATaGTCTGGATTTCATGGCACC | + |
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Preference number: 4 (lower is better) Translates to: AYATLHQPSREPVAAHPNGPTFS*SGFHGT Trigger: GGTGCCATGAAATCCAGATCATGAAAAAGTTGGACC...ATTGGGATGTGCTGCCACAGGCTCTCTTGAAGGTTGATGTAGTGTGGCGTATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | AGAACACTTGCTGAGAGCAACACAAGGAGGCTGGGCTTAGTCTTCAGGAAGAGCCAAAGGCTGTTTGGCTaGGGTAAATGGCTACTAAAC | + |
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Preference number: 4 (lower is better) Translates to: RTLAESNTRRLGLVFRKSQRLFG*GKWLLN Trigger: GTTTAGTAGCCATTTACCTCAGCCAAACAGCCTTTG...GCTCTTCCTGAAGACTAAGCCCAGCCTCCTTGTGTTGCTCTCAGCAAGTGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | CAACACAAGGAGGCTGGGCTTAGTCTTCAGGAAGAGCAATTTTACTTGTCAGCACCATCTAGAACACACTaGGAGGCTGGTTTCCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: QHKEAGLSLQEEQFYLSAPSRTH*EAGFRG Trigger: TCCTCGGAAACCAGCCTCTCAGTGTGTTCTAGATGG...TGCTGACAAGTAAAATTGCTCTTCCTGAAGACTAAGCCCAGCCTCCTTGTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | TGTCGAGTCATTCTGCTAACCAACTCCAATCAAGACTCATCAAACTACTGCTCTAGGGGGCAGCCATGCTaGTACTGGAGGGGTTACTGT | + |
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Preference number: 4 (lower is better) Translates to: CRVILLTNSNQDSSNYCSRGQPC*YWRGYC Trigger: ACAGTAACCCCTCCAGTATCAGCATGGCTGCCCCCT...AGAGCAGTAGTTTGATGAGTCTTGATTGGAGTTGGTTAGCAGAATGACTCGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | CAAGCTACTGTGCTTGTAAAGTCACTCGTAGTTTCCGATCACAGCCATCTCCTCAATTTTCTGGTTTGTTaGGTAGCTTCCGGAGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: QATVLVKSLVVSDHSHLLNFLVC*VASGGP Trigger: GGGACCTCCGGAAGCTACTCAACAAACCAGAAAATT...GAGGAGATGGCTGTGATCGGAAACTACGAGTGACTTTACAAGCACAGTAGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | GTGCTTGTAAAGTCACTCGTAGTTTCCGATCACAGCCATCTCCTCACGGACTGGCGAGACTGTAGTGAATaGAGACTTTCATCACATGGT | + |
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Preference number: 4 (lower is better) Translates to: VLVKSLVVSDHSHLLTDWRDCSE*RLSSHG Trigger: ACCATGTGATGAAAGTCTTCATTCACTACAGTCTCG...CCAGTCCGTGAGGAGATGGCTGTGATCGGAAACTACGAGTGACTTTACAAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | GCAGATCCAGTGTCAGATCAGAATAGATACCTTGTTTTCAGAACTTGGATTCTGGCACGGTGTGCACGATaGTCTTCACCATCTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: ADPVSDQNRYLVFRTWILARCAR*SSPSLC Trigger: GCACAGAGATGGTGAAGATCATCGTGCACACCGTGC...CAGAATCCAAGTTCTGAAAACAAGGTATCTATTCTGATCTGACACTGGATCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR GCA 90 bp | GCATACGCCACACTACATCAACCTTCAAGAGAGCCTGTGGCAGCACATCCCAATTTCTTAATCTTCTCATaGCAGGTAAATGGCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: AYATLHQPSREPVAAHPNFLIFS*QVNGCR Trigger: TCTGCAGCCATTTACCTGGCATGAGAAGATTAAGAA...ATTGGGATGTGCTGCCACAGGCTCTCTTGAAGGTTGATGTAGTGTGGCGTATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR GCA 90 bp | GTGCTTGTAAAGTCACTCGTAGTTTCCGATCACAGCCATCTCCTCACGGACTGGTTCTTAATCTTCTCATaGCAGGTAAATGGCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VLVKSLVVSDHSHLLTDWFLIFS*QVNGCR Trigger: TCTGCAGCCATTTACCTGGCATGAGAAGATTAAGAA...CCAGTCCGTGAGGAGATGGCTGTGATCGGAAACTACGAGTGACTTTACAAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR GCA 90 bp | GTGCTTGTAAAGTCACTCGTAGTTTCCGATCACAGCCATCTCCTCACGGACTGGAGATCAATAATCTTCTaGTTGCAGCCCAACAACTTG | + |
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Preference number: 4 (lower is better) Translates to: VLVKSLVVSDHSHLLTDWRSIIF*LQPNNL Trigger: CAAGTTGTTGGGCTGCAAGCAGAAGATTATTGATCT...CCAGTCCGTGAGGAGATGGCTGTGATCGGAAACTACGAGTGACTTTACAAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | AGAACACTTGCTGAGAGCAACACAAGGAGGCTGGGCTTAGTCTTCAGGAAGAGCTTCCCACCAACATCTTaGAGAACTATATTTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RTLAESNTRRLGLVFRKSFPPTS*RTIFSG Trigger: ACCTGAAAATATAGTTCTTCAAGATGTTGGTGGGAA...GCTCTTCCTGAAGACTAAGCCCAGCCTCCTTGTGTTGCTCTCAGCAAGTGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | CTTGTCAGCAGTCTCTTCCACAGAAAACCCATAGATAAAACTTTACTTCAAATGGCACGGTGTGCACGATaGTCTTCACCATCTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LVSSLFHRKPIDKTLLQMARCAR*SSPSLC Trigger: GCACAGAGATGGTGAAGATCATCGTGCACACCGTGC...CATTTGAAGTAAAGTTTTATCTATGGGTTTTCTGTGGAAGAGACTGCTGACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR GCA 90 bp | AACGAGTGTCGAGTCATTCTGCTAACCAACTCCAATCAAGACTCATCAAACTACCTGGAGGGGTTACTGTaGCTTCTAGACTGTATCCTA | + |
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Preference number: 4 (lower is better) Translates to: NECRVILLTNSNQDSSNYLEGLL*LLDCIL Trigger: TAGGATACAGTCTAGAAGGCACAGTAACCCCTCCAG...GTAGTTTGATGAGTCTTGATTGGAGTTGGTTAGCAGAATGACTCGACACTCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119591.2 |
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| CDS-3UTR CCA 90 bp | GCATACGCCACACTACATCAACCTTCAAGAGAGCCTGTGGCAGCACATCCCAATTTTACAACATTCGCATaGTCCAACTTTTTCATGATC | + |
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Preference number: 4 (lower is better) Translates to: AYATLHQPSREPVAAHPNFTTFA*SNFFMI Trigger: GATCATGAAAAAGTTGGACCATGCGAATGTTGTAAA...ATTGGGATGTGCTGCCACAGGCTCTCTTGAAGGTTGATGTAGTGTGGCGTATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR CCA 90 bp | CAACACAAGGAGGCTGGGCTTAGTCTTCAGGAAGAGCAATTTTACTTGTCAGCAATCGCTCTCTGTTTTTaGAACTTAGCTCTAAACGAC | + |
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Preference number: 4 (lower is better) Translates to: QHKEAGLSLQEEQFYLSAIALCF*NLALND Trigger: GTCGTTTAGAGCTAAGTTCCAAAAACAGAGAGCGAT...TGCTGACAAGTAAAATTGCTCTTCCTGAAGACTAAGCCCAGCCTCCTTGTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR CCA 90 bp | TGTCGAGTCATTCTGCTAACCAACTCCAATCAAGACTCATCAAACTACTGCTCTCAATTCAGCATCAATTaGAGCCAGCTTTCCATTGGC | + |
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Preference number: 4 (lower is better) Translates to: CRVILLTNSNQDSSNYCSQFSIN*SQLSIG Trigger: GCCAATGGAAAGCTGGCTCCAATTGATGCTGAATTG...AGAGCAGTAGTTTGATGAGTCTTGATTGGAGTTGGTTAGCAGAATGACTCGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119591.2 |
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| CDS-3UTR CCA 90 bp | CCATGTTGGGCCTTATGCCGAAAATTTAGGCCTTTAGAAGATTATCTTTTTCATTCCCCCTCTCTGCTGTaGGTCCCAATTCAGCATCAA | + |
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Preference number: 4 (lower is better) Translates to: PCWALCRKFRPLEDYLFHSPSLL*VPIQHQ Trigger: TTGATGCTGAATTGGGACCCACAGCAGAGAGGGGGA...ATGAAAAAGATAATCTTCTAAAGGCCTAAATTTTCGGCATAAGGCCCAACATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | CTTAGTCTTCAGGAAGAGCAATTTTACTTGTCAGCAGTCTCTTCCACAGAAAACGGTCCAACTTTTTCATaGTCTGGATTTCATGGCACC | + |
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Preference number: 4 (lower is better) Translates to: LSLQEEQFYLSAVSSTENGPTFS*SGFHGT Trigger: GGTGCCATGAAATCCAGATCATGAAAAAGTTGGACC...GTTTTCTGTGGAAGAGACTGCTGACAAGTAAAATTGCTCTTCCTGAAGACTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | TCTTCTAAGTTATTTAACATAAGGCAGAGAACCGCAGTCTTTTATCTGAAACCCAGAAATCCCTGTCTCTaGCAGAAGCTCCTGAGAACC | + |
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Preference number: 4 (lower is better) Translates to: SSKLFNIRQRTAVFYLKPRNPCL*QKLLRT Trigger: GGTTCTCAGGAGCTTCTGTCAGAGACAGGGATTTCT...GGGTTTCAGATAAAAGACTGCGGTTCTCTGCCTTATGTTAAATAACTTAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | CCATGTTGGGCCTTATGCCGAAAATTTAGGCCTTTAGAAGATTATCTTTTTCATCTGTCGCTGTACAAGTaGTCAGGAGGTCTGTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: PCWALCRKFRPLEDYLFHLSLYK*SGGLCF Trigger: AAAGCACAGACCTCCTGATCACTTGTACAGCGACAG...ATGAAAAAGATAATCTTCTAAAGGCCTAAATTTTCGGCATAAGGCCCAACATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | CTTACACAGGAAAAGGACTCTATTAAATGTGTGATTAAAGATGGGATTCATCTGGACCAAACAGCTCCTTaGGAACACGGTCCTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: LTQEKDSIKCVIKDGIHLDQTAP*EHGPDS Trigger: AGAGTCAGGACCGTGTTCTCAAGGAGCTGTTTGGTC...CAGATGAATCCCATCTTTAATCACACATTTAATAGAGTCCTTTTCCTGTGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | ATTCACACTAAATGGGATAAGCAGATCCAGTGTCAGATCAGAATAGATACCTTGAACGTCTCTCCATCTTaGGGAGTTACCACACATGTC | + |
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Preference number: 4 (lower is better) Translates to: IHTKWDKQIQCQIRIDTLNVSPS*GVTTHV Trigger: GACATGTGTGGTAACTCCTCAAGATGGAGAGACGTT...CAAGGTATCTATTCTGATCTGACACTGGATCTGCTTATCCCATTTAGTGTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026217.11 |
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| CDS-3UTR CCA 90 bp | GTGAATTTTTCATTCCTGTATACTAATACCATGTTGGGCCTTATGCCGAAAATTTCCCCCTCTCTGCTGTaGGTCCCAATTCAGCATCAA | + |
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Preference number: 4 (lower is better) Translates to: VNFSFLYTNTMLGLMPKISPSLL*VPIQHQ Trigger: TTGATGCTGAATTGGGACCCACAGCAGAGAGGGGGA...AATTTTCGGCATAAGGCCCAACATGGTATTAGTATACAGGAATGAAAAATTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | GCAGATCCAGTGTCAGATCAGAATAGATACCTTGTTTTCAGAACTTGGATTCTGTCTGACAGAAGCTCCTaGGAACCTGTATTTATTCCT | + |
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Preference number: 4 (lower is better) Translates to: ADPVSDQNRYLVFRTWILSDRSS*EPVFIP Trigger: AGGAATAAATACAGGTTCTCAGGAGCTTCTGTCAGA...CAGAATCCAAGTTCTGAAAACAAGGTATCTATTCTGATCTGACACTGGATCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR TCA 90 bp | GTGAATTTTTCATTCCTGTATACTAATACCATGTTGGGCCTTATGCCGAAAATTCTGTCGCTGTACAAGTaGTCAGGAGGTCTGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VNFSFLYTNTMLGLMPKILSLYK*SGGLCF Trigger: AAAGCACAGACCTCCTGATCACTTGTACAGCGACAG...AATTTTCGGCATAAGGCCCAACATGGTATTAGTATACAGGAATGAAAAATTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CCA 90 bp | GTGAATTTTTCATTCCTGTATACTAATACCATGTTGGGCCTTATGCCGAAAATTAACACACTGAGAGGCTaGTTTCCGAGGATCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VNFSFLYTNTMLGLMPKINTLRG*FPRIQR Trigger: TCTCTGGATCCTCGGAAACCAGCCTCTCAGTGTGTT...AATTTTCGGCATAAGGCCCAACATGGTATTAGTATACAGGAATGAAAAATTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCTAAGTTATTTAACATAAGGCAGAGAACCGCAGTCTTTTATCTGAAACCCCAAAGGCTGTTTGGCTaGGGTAAATGGCTACTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSKLFNIRQRTAVFYLKPQRLFG*GKWLLN Trigger: GTTTAGTAGCCATTTACCTCAGCCAAACAGCCTTTG...GGGTTTCAGATAAAAGACTGCGGTTCTCTGCCTTATGTTAAATAACTTAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR GCA 90 bp | AACCGCAGTCTTTTATCTGAAACCCTTAAGTCTAGATGTTTCAGAATGAGAACTAGAACAGTACTCCATTaGCAGAAGAGGCACATCGTT | + |
|
Preference number: 4 (lower is better) Translates to: NRSLLSETLKSRCFRMRTRTVLH*QKRHIV Trigger: AACGATGTGCCTCTTCTGGCAATGGAGTACTGTTCT...AGTTCTCATTCTGAAACATCTAGACTTAAGGGTTTCAGATAAAAGACTGCGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCTAAGTTATTTAACATAAGGCAGAGAACCGCAGTCTTTTATCTGAAACCCTCTTCACCATCTCTGTaGTGTCGCTGTACAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSKLFNIRQRTAVFYLKPSSPSL*CRCTSD Trigger: ATCACTTGTACAGCGACAGCACAGAGATGGTGAAGA...GGGTTTCAGATAAAAGACTGCGGTTCTCTGCCTTATGTTAAATAACTTAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CCA 90 bp | AACCGCAGTCTTTTATCTGAAACCCTTAAGTCTAGATGTTTCAGAATGAGAACTCAATTCAGCATCAATTaGAGCCAGCTTTCCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRSLLSETLKSRCFRMRTQFSIN*SQLSIG Trigger: GCCAATGGAAAGCTGGCTCCAATTGATGCTGAATTG...AGTTCTCATTCTGAAACATCTAGACTTAAGGGTTTCAGATAAAAGACTGCGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CCA 90 bp | TGTCGAGTCATTCTGCTAACCAACTCCAATCAAGACTCATCAAACTACTGCTCTACTTCTGGATGCAAATaGTCCTTCATATACAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CRVILLTNSNQDSSNYCSTSGCK*SFIYSL Trigger: AAGACTGTATATGAAGGACCATTTGCATCCAGAAGT...AGAGCAGTAGTTTGATGAGTCTTGATTGGAGTTGGTTAGCAGAATGACTCGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119591.2 |
||
| CDS-3UTR TCA 90 bp | GCAGATCCAGTGTCAGATCAGAATAGATACCTTGTTTTCAGAACTTGGATTCTGTTCCCACCAACATCTTaGAGAACTATATTTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ADPVSDQNRYLVFRTWILFPPTS*RTIFSG Trigger: ACCTGAAAATATAGTTCTTCAAGATGTTGGTGGGAA...CAGAATCCAAGTTCTGAAAACAAGGTATCTATTCTGATCTGACACTGGATCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR TCA 90 bp | AACCGCAGTCTTTTATCTGAAACCCTTAAGTCTAGATGTTTCAGAATGAGAACTCGAGACTGTAGTGAATaGAGACTTTCATCACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NRSLLSETLKSRCFRMRTRDCSE*RLSSHG Trigger: ACCATGTGATGAAAGTCTTCATTCACTACAGTCTCG...AGTTCTCATTCTGAAACATCTAGACTTAAGGGTTTCAGATAAAAGACTGCGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCTAAGTTATTTAACATAAGGCAGAGAACCGCAGTCTTTTATCTGAAACCCTCTGACAGAAGCTCCTaGGAACCTGTATTTATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSKLFNIRQRTAVFYLKPSDRSS*EPVFIP Trigger: AGGAATAAATACAGGTTCTCAGGAGCTTCTGTCAGA...GGGTTTCAGATAAAAGACTGCGGTTCTCTGCCTTATGTTAAATAACTTAGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCTAAGTTATTTAACATAAGGCAGAGAACCGCAGTCTTTTATCTGAAACCCTCTGGGGCCAAATACTaGAATGTTCCCACAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSKLFNIRQRTAVFYLKPSGAKY*NVPTKD Trigger: ATCTTTTGTGGGAACATTGCAGTATTTGGCCCCAGA...GGGTTTCAGATAAAAGACTGCGGTTCTCTGCCTTATGTTAAATAACTTAGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR GCA 90 bp | CTTACACAGGAAAAGGACTCTATTAAATGTGTGATTAAAGATGGGATTCATCTGTCTTCACCATCTCTGTaGTGTCGCTGTACAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTQEKDSIKCVIKDGIHLSSPSL*CRCTSD Trigger: ATCACTTGTACAGCGACAGCACAGAGATGGTGAAGA...CAGATGAATCCCATCTTTAATCACACATTTAATAGAGTCCTTTTCCTGTGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CCA 90 bp | AACGAGTGTCGAGTCATTCTGCTAACCAACTCCAATCAAGACTCATCAAACTACAATCAGATAAACTTCTaGATGCAAATGGTCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NECRVILLTNSNQDSSNYNQINF*MQMVLH Trigger: ATGAAGGACCATTTGCATCCAGAAGTTTATCTGATT...GTAGTTTGATGAGTCTTGATTGGAGTTGGTTAGCAGAATGACTCGACACTCGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119591.2 |
||
| CDS-3UTR CCA 90 bp | AACTTGGATTCTGAGACTGTAATTACAGATAAAGGAATGCAGACCCTTTGGAATATCAAACTACTGCTCTaGTCCTCATTTGCTTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: NLDSETVITDKGMQTLWNIKLLL*SSFASR Trigger: TCGTGAAGCAAATGAGGACCAGAGCAGTAGTTTGAT...ATTCCAAAGGGTCTGCATTCCTTTATCTGTAATTACAGTCTCAGAATCCAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026217.11 |
||
| CDS-3UTR GCA 90 bp | CTTACACAGGAAAAGGACTCTATTAAATGTGTGATTAAAGATGGGATTCATCTGTCTGGGGCCAAATACTaGAATGTTCCCACAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTQEKDSIKCVIKDGIHLSGAKY*NVPTKD Trigger: ATCTTTTGTGGGAACATTGCAGTATTTGGCCCCAGA...CAGATGAATCCCATCTTTAATCACACATTTAATAGAGTCCTTTTCCTGTGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR GCA 90 bp | GCAGATCCAGTGTCAGATCAGAATAGATACCTTGTTTTCAGAACTTGGATTCTGAGTCATCTCTTCACATaGAAATATACACTTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ADPVSDQNRYLVFRTWILSHLFT*KYTLWI Trigger: GATCCAAAGTGTATATTTGCATGTGAAGAGATGACT...CAGAATCCAAGTTCTGAAAACAAGGTATCTATTCTGATCTGACACTGGATCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTCAGCAGTCTCTTCCACAGAAAACCCATAGATAAAACTTTACTTCAAATGAGATCAATAATCTTCTaGTTGCAGCCCAACAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVSSLFHRKPIDKTLLQMRSIIF*LQPNNL Trigger: CAAGTTGTTGGGCTGCAAGCAGAAGATTATTGATCT...CATTTGAAGTAAAGTTTTATCTATGGGTTTTCTGTGGAAGAGACTGCTGACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTAAGTTATTTAACATAAGGCAGAGAACCGCAGTCTTTTATCTGAAACCCATCGCTCTCTGTTTTTaGAACTTAGCTCTAAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSKLFNIRQRTAVFYLKPIALCF*NLALND Trigger: GTCGTTTAGAGCTAAGTTCCAAAAACAGAGAGCGAT...GGGTTTCAGATAAAAGACTGCGGTTCTCTGCCTTATGTTAAATAACTTAGAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CCA 90 bp | GCAGATCCAGTGTCAGATCAGAATAGATACCTTGTTTTCAGAACTTGGATTCTGAATCAGATAAACTTCTaGATGCAAATGGTCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ADPVSDQNRYLVFRTWILNQINF*MQMVLH Trigger: ATGAAGGACCATTTGCATCCAGAAGTTTATCTGATT...CAGAATCCAAGTTCTGAAAACAAGGTATCTATTCTGATCTGACACTGGATCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR GCA 90 bp | ATTCACACTAAATGGGATAAGCAGATCCAGTGTCAGATCAGAATAGATACCTTGAGTCATCTCTTCACATaGAAATATACACTTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: IHTKWDKQIQCQIRIDTLSHLFT*KYTLWI Trigger: GATCCAAAGTGTATATTTGCATGTGAAGAGATGACT...CAAGGTATCTATTCTGATCTGACACTGGATCTGCTTATCCCATTTAGTGTGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTCAGCAGTCTCTTCCACAGAAAACCCATAGATAAAACTTTACTTCAAATGTACATTCAAACACCATaGTCCCAAAGCTCCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVSSLFHRKPIDKTLLQMYIQTP*SQSSNN Trigger: ATTATTGGAGCTTTGGGACCATGGTGTTTGAATGTA...CATTTGAAGTAAAGTTTTATCTATGGGTTTTCTGTGGAAGAGACTGCTGACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CCA 90 bp | AACTTGGATTCTGAGACTGTAATTACAGATAAAGGAATGCAGACCCTTTGGAATACTTCTGGATGCAAATaGTCCTTCATATACAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLDSETVITDKGMQTLWNTSGCK*SFIYSL Trigger: AAGACTGTATATGAAGGACCATTTGCATCCAGAAGT...ATTCCAAAGGGTCTGCATTCCTTTATCTGTAATTACAGTCTCAGAATCCAAGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR GCA 90 bp | AACTTGGATTCTGAGACTGTAATTACAGATAAAGGAATGCAGACCCTTTGGAATAATTTAGCTTTGAGTTaGTGTGATGCTGAGATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLDSETVITDKGMQTLWNNLALS*CDAEIK Trigger: TTTGATCTCAGCATCACAGCAACTCAAAGCTAAATT...ATTCCAAAGGGTCTGCATTCCTTTATCTGTAATTACAGTCTCAGAATCCAAGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR GCA 90 bp | GTGAATTTTTCATTCCTGTATACTAATACCATGTTGGGCCTTATGCCGAAAATTAATTTAGCTTTGAGTTaGTGTGATGCTGAGATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VNFSFLYTNTMLGLMPKINLALS*CDAEIK Trigger: TTTGATCTCAGCATCACAGCAACTCAAAGCTAAATT...AATTTTCGGCATAAGGCCCAACATGGTATTAGTATACAGGAATGAAAAATTCAC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CCA 90 bp | CATAAATCAATGAATATTCACACTAAATGGGATAAGCAGATCCAGTGTCAGATCTTTACAACATTCGCATaGTCCAACTTTTTCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: HKSMNIHTKWDKQIQCQIFTTFA*SNFFMI Trigger: GATCATGAAAAAGTTGGACCATGCGAATGTTGTAAA...GATCTGACACTGGATCTGCTTATCCCATTTAGTGTGAATATTCATTGATTTATG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS TCA 90 bp | ACACTGAGAGGCTGGTTTCCGAGGATCCAGAGAAATCCCTGTCTCTaGCAGAAGCTCCTGAGAACCTGTATTTATTCCTGTTTCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLRGWFPRIQRNPCL*QKLLRTCIYSCFTL Trigger: GAGCGTGAAACAGGAATAAATACAGGTTCTCAGGAGCTTCTGTCAGAGACAGGGATTTCTCTGGATCCTCGGAAACCAGCCTCTCAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTTGTAAAGTCACTCGTAGTTTCCGATCACAGCCATCTCCTCACGGACTGGAACTACAAAGGCTGTTaGGCTGAGGTAAATGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: VLVKSLVVSDHSHLLTDWNYKGC*AEVNGY Trigger: GTAGCCATTTACCTCAGCCAAACAGCCTTTGTAGTT...CCAGTCCGTGAGGAGATGGCTGTGATCGGAAACTACGAGTGACTTTACAAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | GCATACGCCACACTACATCAACCTTCAAGAGAGCCTGTGGCAGCACATCCCAATGGAGCCAGCTTTCCATaGGCTCTACTATTAAACTAC | + |
|
Preference number: 5 (lower is better) Translates to: AYATLHQPSREPVAAHPNGASFP*ALLLNY Trigger: GTAGTTTAATAGTAGAGCCAATGGAAAGCTGGCTCC...ATTGGGATGTGCTGCCACAGGCTCTCTTGAAGGTTGATGTAGTGTGGCGTATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | AGAACACTTGCTGAGAGCAACACAAGGAGGCTGGGCTTAGTCTTCAGGAAGAGCTCAATAATCTTCTGCTaGCAGCCCAACAACTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTLAESNTRRLGLVFRKSSIIFC*QPNNLL Trigger: GAGCAAGTTGTTGGGCTGCAAGCAGAAGATTATTGA...GCTCTTCCTGAAGACTAAGCCCAGCCTCCTTGTGTTGCTCTCAGCAAGTGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTTGTAAAGTCACTCGTAGTTTCCGATCACAGCCATCTCCTCACGGACTGGAACTCCAATTTAGCTTaGAGTTGCTGTGATGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLVKSLVVSDHSHLLTDWNSNLA*SCCDAE Trigger: CTCAGCATCACAGCAACTCAAAGCTAAATTGGAGTT...CCAGTCCGTGAGGAGATGGCTGTGATCGGAAACTACGAGTGACTTTACAAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | CAACACAAGGAGGCTGGGCTTAGTCTTCAGGAAGAGCAATTTTACTTGTCAGCACAATTTTCTGGTTTGTaGAGTAGCTTCCGGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QHKEAGLSLQEEQFYLSAQFSGL*SSFRRS Trigger: GGACCTCCGGAAGCTACTCAACAAACCAGAAAATTG...TGCTGACAAGTAAAATTGCTCTTCCTGAAGACTAAGCCCAGCCTCCTTGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCTACTGTGCTTGTAAAGTCACTCGTAGTTTCCGATCACAGCCATCTCCTCCAACAATTTTCTGGTTaGTTGAGTAGCTTCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QATVLVKSLVVSDHSHLLQQFSG*LSSFRR Trigger: CCTCCGGAAGCTACTCAACAAACCAGAAAATTGTTG...GAGGAGATGGCTGTGATCGGAAACTACGAGTGACTTTACAAGCACAGTAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCTACTGTGCTTGTAAAGTCACTCGTAGTTTCCGATCACAGCCATCTCCTCTCAATAATCTTCTGCTaGCAGCCCAACAACTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QATVLVKSLVVSDHSHLLSIIFC*QPNNLL Trigger: GAGCAAGTTGTTGGGCTGCAAGCAGAAGATTATTGA...GAGGAGATGGCTGTGATCGGAAACTACGAGTGACTTTACAAGCACAGTAGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | CTTAGTCTTCAGGAAGAGCAATTTTACTTGTCAGCAGTCTCTTCCACAGAAAACAGGGCCACTTCCACCTaGGGGAGTAGATCAATAATC | + |
|
Preference number: 5 (lower is better) Translates to: LSLQEEQFYLSAVSSTENRATST*GSRSII Trigger: GATTATTGATCTACTCCCCAAGGTGGAAGTGGCCCT...GTTTTCTGTGGAAGAGACTGCTGACAAGTAAAATTGCTCTTCCTGAAGACTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCTACTGTGCTTGTAAAGTCACTCGTAGTTTCCGATCACAGCCATCTCCTCCTGTATAATTGGCAGTaGTATTTTGCTGTCTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QATVLVKSLVVSDHSHLLLYNWQ*YFAVLY Trigger: GTACAAGACAGCAAAATACAACTGCCAATTATACAG...GAGGAGATGGCTGTGATCGGAAACTACGAGTGACTTTACAAGCACAGTAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS TCA 90 bp | CAGCTTTCCATTGGCTCTACTATTAAACTACAAAGGCTGTTTGGCTaGGGTAAATGGCTACTAAACCGAACTTCTCCAGTCATCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QLSIGSTIKLQRLFG*GKWLLNRTSPVISS Trigger: TGAAGAGATGACTGGAGAAGTTCGGTTTAGTAGCCATTTACCTCAGCCAAACAGCCTTTGTAGTTTAATAGTAGAGCCAATGGAAAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | AAACGAGTGTCGAGTCATTCTGCTAACCAACTCCAATCAAGACTCATCAAACTAAACTACAAAGGCTGTTaGGCTGAGGTAAATGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: KRVSSHSANQLQSRLIKLNYKGC*AEVNGY Trigger: GTAGCCATTTACCTCAGCCAAACAGCCTTTGTAGTT...TAGTTTGATGAGTCTTGATTGGAGTTGGTTAGCAGAATGACTCGACACTCGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | AAACGAGTGTCGAGTCATTCTGCTAACCAACTCCAATCAAGACTCATCAAACTAGGAGCCAGCTTTCCATaGGCTCTACTATTAAACTAC | + |
|
Preference number: 5 (lower is better) Translates to: KRVSSHSANQLQSRLIKLGASFP*ALLLNY Trigger: GTAGTTTAATAGTAGAGCCAATGGAAAGCTGGCTCC...TAGTTTGATGAGTCTTGATTGGAGTTGGTTAGCAGAATGACTCGACACTCGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | ATTCACACTAAATGGGATAAGCAGATCCAGTGTCAGATCAGAATAGATACCTTGCCAATTCAGCATCAATaGGAGCCAGCTTTCCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: IHTKWDKQIQCQIRIDTLPIQHQ*EPAFHW Trigger: CCAATGGAAAGCTGGCTCCAATTGATGCTGAATTGG...CAAGGTATCTATTCTGATCTGACACTGGATCTGCTTATCCCATTTAGTGTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | CTTAGTCTTCAGGAAGAGCAATTTTACTTGTCAGCAGTCTCTTCCACAGAAAACGACTTAATTGCTATTTaGAGATCAAGTTCCCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSLQEEQFYLSAVSSTENDLIAI*RSSSRC Trigger: GCACCGGGAACTTGATCTCAAAATAGCAATTAAGTC...GTTTTCTGTGGAAGAGACTGCTGACAAGTAAAATTGCTCTTCCTGAAGACTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | CTTACACAGGAAAAGGACTCTATTAAATGTGTGATTAAAGATGGGATTCATCTGCAGAACAGTACTCCATaGCCAGAAGAGGCACATCGT | + |
|
Preference number: 5 (lower is better) Translates to: LTQEKDSIKCVIKDGIHLQNSTP*PEEAHR Trigger: ACGATGTGCCTCTTCTGGCAATGGAGTACTGTTCTG...CAGATGAATCCCATCTTTAATCACACATTTAATAGAGTCCTTTTCCTGTGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | GTGAATTTTTCATTCCTGTATACTAATACCATGTTGGGCCTTATGCCGAAAATTCAGAACAGTACTCCATaGCCAGAAGAGGCACATCGT | + |
|
Preference number: 5 (lower is better) Translates to: VNFSFLYTNTMLGLMPKIQNSTP*PEEAHR Trigger: ACGATGTGCCTCTTCTGGCAATGGAGTACTGTTCTG...AATTTTCGGCATAAGGCCCAACATGGTATTAGTATACAGGAATGAAAAATTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | CCATGTTGGGCCTTATGCCGAAAATTTAGGCCTTTAGAAGATTATCTTTTTCATCAATTTTCTGGTTTGTaGAGTAGCTTCCGGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PCWALCRKFRPLEDYLFHQFSGL*SSFRRS Trigger: GGACCTCCGGAAGCTACTCAACAAACCAGAAAATTG...ATGAAAAAGATAATCTTCTAAAGGCCTAAATTTTCGGCATAAGGCCCAACATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
||
| CDS-3UTR CAA 90 bp | ATTCACACTAAATGGGATAAGCAGATCCAGTGTCAGATCAGAATAGATACCTTGCAACAATTTTCTGGTTaGTTGAGTAGCTTCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IHTKWDKQIQCQIRIDTLQQFSG*LSSFRR Trigger: CCTCCGGAAGCTACTCAACAAACCAGAAAATTGTTG...CAAGGTATCTATTCTGATCTGACACTGGATCTGCTTATCCCATTTAGTGTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR CAA 90 bp | AACTTGGATTCTGAGACTGTAATTACAGATAAAGGAATGCAGACCCTTTGGAATCCAATTCAGCATCAATaGGAGCCAGCTTTCCATTGG | + |
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Preference number: 5 (lower is better) Translates to: NLDSETVITDKGMQTLWNPIQHQ*EPAFHW Trigger: CCAATGGAAAGCTGGCTCCAATTGATGCTGAATTGG...ATTCCAAAGGGTCTGCATTCCTTTATCTGTAATTACAGTCTCAGAATCCAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR CAA 90 bp | CATAAATCAATGAATATTCACACTAAATGGGATAAGCAGATCCAGTGTCAGATCAGGGCCACTTCCACCTaGGGGAGTAGATCAATAATC | + |
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Preference number: 5 (lower is better) Translates to: HKSMNIHTKWDKQIQCQIRATST*GSRSII Trigger: GATTATTGATCTACTCCCCAAGGTGGAAGTGGCCCT...GATCTGACACTGGATCTGCTTATCCCATTTAGTGTGAATATTCATTGATTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CCA 90 bp | AAACCGAACTTCTCCAGTCATCTCTTCACATGCAAATATACACTTTaGATCTTTCTTCTTAATCTTCTCATGCCAGGTAAATGGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: KPNFSSHLFTCKYTL*IFLLNLLMPGKWLQ Trigger: CTGCAGCCATTTACCTGGCATGAGAAGATTAAGAAGAAAGATCCAAAGTGTATATTTGCATGTGAAGAGATGACTGGAGAAGTTCGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR CAA 90 bp | CTTAGTCTTCAGGAAGAGCAATTTTACTTGTCAGCAGTCTCTTCCACAGAAAACTGTACAGAGACTTCCTaGATCAACATCTTTGGCATA | + |
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Preference number: 5 (lower is better) Translates to: LSLQEEQFYLSAVSSTENCTETS*INIFGI Trigger: TATGCCAAAGATGTTGATCAAGGAAGTCTCTGTACA...GTTTTCTGTGGAAGAGACTGCTGACAAGTAAAATTGCTCTTCCTGAAGACTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CCA 90 bp | TACGTAGTGCACTGCTTCAGCCCATACTTTCCGCAGCTGTATAATTaGCAGTTGTATTTTGCTGTCTTGTACAATATAATTTACACAATC | + |
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Preference number: 5 (lower is better) Translates to: YVVHCFSPYFPQLYN*QLYFAVLYNIIYTI Trigger: GATTGTGTAAATTATATTGTACAAGACAGCAAAATACAACTGCCAATTATACAGCTGCGGAAAGTATGGGCTGAAGCAGTGCACTACGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CCA 90 bp | CTACTGCTCTGGTCCTCATTTGCTTCACGAATAATAGTACTTAAATaGCCAAGACAGTTCAGATTTTCTTCTATCATTTGTGCTAACGTC | + |
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Preference number: 5 (lower is better) Translates to: LLLWSSFASRIIVLK*PRQFRFSSIICANV Trigger: GACGTTAGCACAAATGATAGAAGAAAATCTGAACTGTCTTGGCCATTTAAGTACTATTATTCGTGAAGCAAATGAGGACCAGAGCAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026217.11 |
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| CDS-3UTR CAA 90 bp | AACTTGGATTCTGAGACTGTAATTACAGATAAAGGAATGCAGACCCTTTGGAATCATCGCTCTCTGTTTTaGGAACTTAGCTCTAAACGA | + |
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Preference number: 5 (lower is better) Translates to: NLDSETVITDKGMQTLWNHRSLF*ELSSKR Trigger: TCGTTTAGAGCTAAGTTCCAAAAACAGAGAGCGATG...ATTCCAAAGGGTCTGCATTCCTTTATCTGTAATTACAGTCTCAGAATCCAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR CAA 90 bp | ATTCACACTAAATGGGATAAGCAGATCCAGTGTCAGATCAGAATAGATACCTTGCTTCCCACCAACATCTaGAAGAACTATATTTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: IHTKWDKQIQCQIRIDTLLPTNI*KNYIFR Trigger: CCTGAAAATATAGTTCTTCAAGATGTTGGTGGGAAG...CAAGGTATCTATTCTGATCTGACACTGGATCTGCTTATCCCATTTAGTGTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR CAA 90 bp | AACCGCAGTCTTTTATCTGAAACCCTTAAGTCTAGATGTTTCAGAATGAGAACTAACTCCAATTTAGCTTaGAGTTGCTGTGATGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: NRSLLSETLKSRCFRMRTNSNLA*SCCDAE Trigger: CTCAGCATCACAGCAACTCAAAGCTAAATTGGAGTT...AGTTCTCATTCTGAAACATCTAGACTTAAGGGTTTCAGATAAAAGACTGCGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR CAA 90 bp | CTTACACAGGAAAAGGACTCTATTAAATGTGTGATTAAAGATGGGATTCATCTGGACTTAATTGCTATTTaGAGATCAAGTTCCCGGTGC | + |
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Preference number: 5 (lower is better) Translates to: LTQEKDSIKCVIKDGIHLDLIAI*RSSSRC Trigger: GCACCGGGAACTTGATCTCAAAATAGCAATTAAGTC...CAGATGAATCCCATCTTTAATCACACATTTAATAGAGTCCTTTTCCTGTGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR CAA 90 bp | CCATGTTGGGCCTTATGCCGAAAATTTAGGCCTTTAGAAGATTATCTTTTTCATCTTCCCACCAACATCTaGAAGAACTATATTTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PCWALCRKFRPLEDYLFHLPTNI*KNYIFR Trigger: CCTGAAAATATAGTTCTTCAAGATGTTGGTGGGAAG...ATGAAAAAGATAATCTTCTAAAGGCCTAAATTTTCGGCATAAGGCCCAACATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR CAA 90 bp | TCTTCTAAGTTATTTAACATAAGGCAGAGAACCGCAGTCTTTTATCTGAAACCCTGTACAGAGACTTCCTaGATCAACATCTTTGGCATA | + |
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Preference number: 5 (lower is better) Translates to: SSKLFNIRQRTAVFYLKPCTETS*INIFGI Trigger: TATGCCAAAGATGTTGATCAAGGAAGTCTCTGTACA...GGGTTTCAGATAAAAGACTGCGGTTCTCTGCCTTATGTTAAATAACTTAGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CCA 90 bp | ATGTTCCCACAAAAGATGTACAGAGACTTCCTTGATCAACATCTTTaGCATAACCCAAATCAATTATTTTATGTATTGTCTTCCCACCAA | + |
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Preference number: 5 (lower is better) Translates to: MFPQKMYRDFLDQHL*HNPNQLFYVLSSHQ Trigger: TTGGTGGGAAGACAATACATAAAATAATTGATTTGGGTTATGCCAAAGATGTTGATCAAGGAAGTCTCTGTACATCTTTTGTGGGAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS-3UTR CAA 90 bp | GTGAATTTTTCATTCCTGTATACTAATACCATGTTGGGCCTTATGCCGAAAATTCTGTATAATTGGCAGTaGTATTTTGCTGTCTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: VNFSFLYTNTMLGLMPKILYNWQ*YFAVLY Trigger: GTACAAGACAGCAAAATACAACTGCCAATTATACAG...AATTTTCGGCATAAGGCCCAACATGGTATTAGTATACAGGAATGAAAAATTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS TCA 72 bp | AGCCCAACAACTTGCTCAGGTGACCAAACAGCTCCTTaGGAACACGGTCCTGACTCTGCACGGTGTGCACGA | + |
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Preference number: 6 (lower is better) Translates to: SPTTCSGDQTAP*EHGPDSARCAR Trigger: TCGTGCACACCGTGCAGAGTCAGGACCGTGTTCTCAAGGAGCTGTTTGGTCACCTGAGCAAGTTGTTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CCA 72 bp | CAGGAGGTCTGTGCTTTAGCTGCTTATAGAGATCAATaGCACGCTGCTCCAGAGACTCCATCAAGTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: QEVCALAAYRDQ*HAAPETPSSLP Trigger: AGGGAGACTTGATGGAGTCTCTGGAGCAGCGTGCCATTGATCTCTATAAGCAGCTAAAGCACAGACCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS TCA 72 bp | GGCTGGTTTCCGAGGATCCAGAGAAATCCCTGTCTCTaGCAGAAGCTCCTGAGAACCTGTATTTATTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GWFPRIQRNPCL*QKLLRTCIYSC Trigger: ACAGGAATAAATACAGGTTCTCAGGAGCTTCTGTCAGAGACAGGGATTTCTCTGGATCCTCGGAAACCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS GCA 72 bp | GACTTAACATTGCTGCTCTTTGTCCCTGGAAGAGCCTaGTGTAGTCTTCCTTTAGCCCAGATACGTAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: DLTLLLFVPGRA*CSLPLAQIRSA Trigger: TGCACTACGTATCTGGGCTAAAGGAAGACTACAGCAGGCTCTTCCAGGGACAAAGAGCAGCAATGTTAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CCA 72 bp | CAAACACCATGGTCCCAAAGCTCCAATAATCCACAGTaGCTGTGTACGGCTTATTTTCAAAGAGCTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: QTPWSQSSNNPQ*LCTAYFQRALG Trigger: CCCCAGAGCTCTTTGAAAATAAGCCGTACACAGCCACTGTGGATTATTGGAGCTTTGGGACCATGGTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CAA 72 bp | TCAGCTTCTTTGATGTTACTGAGGGCCACTTCCACCTaGGGGAGTAGATCAATAATCTTCTGCTTGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SASLMLLRATST*GSRSIIFCLQP Trigger: GGGCTGCAAGCAGAAGATTATTGATCTACTCCCCAAGGTGGAAGTGGCCCTCAGTAACATCAAAGAAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CAA 72 bp | ATCTGGCTTTCTTTAAGTCCACAACAATTTTCTGGTTaGTTGAGTAGCTTCCGGAGGTCCCCTCCAGAACAG | + |
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Preference number: 6 (lower is better) Translates to: IWLSLSPQQFSG*LSSFRRSPPEQ Trigger: CTGTTCTGGAGGGGACCTCCGGAAGCTACTCAACAAACCAGAAAATTGTTGTGGACTTAAAGAAAGCCAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CAA 72 bp | TTTCCCTGCATAAACATGACAGTATTGTCAGCTTCTTaGATGTTACTGAGGGCCACTTCCACCTTGGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: FPCINMTVLSAS*MLLRATSTLGS Trigger: ACTCCCCAAGGTGGAAGTGGCCCTCAGTAACATCAAAGAAGCTGACAATACTGTCATGTTTATGCAGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CAA 90 bp | TTCTGCCTCTTTCCCTGCATAAACATGACAGTATTGTCAGCTTCTTaGATGTTACTGAGGGCCACTTCCACCTTGGGGAGTAGATCAATA | + |
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Preference number: 6 (lower is better) Translates to: FCLFPCINMTVLSAS*MLLRATSTLGSRSI Trigger: TATTGATCTACTCCCCAAGGTGGAAGTGGCCCTCAGTAACATCAAAGAAGCTGACAATACTGTCATGTTTATGCAGGGAAAGAGGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS TCA 72 bp | ATTGGCTCTACTATTAAACTACAAAGGCTGTTTGGCTaGGGTAAATGGCTACTAAACCGAACTTCTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: IGSTIKLQRLFG*GKWLLNRTSPV Trigger: GACTGGAGAAGTTCGGTTTAGTAGCCATTTACCTCAGCCAAACAGCCTTTGTAGTTTAATAGTAGAGCCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CCA 72 bp | TTTACAACATTCGCATGGTCCAACTTTTTCATGATCTaGATTTCATGGCACCATCGCTCTCTGTTTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: FTTFAWSNFFMI*ISWHHRSLFLE Trigger: TTCCAAAAACAGAGAGCGATGGTGCCATGAAATCCAGATCATGAAAAAGTTGGACCATGCGAATGTTGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CAA 72 bp | CTGCAATGTTCCCACAAAAGATGTACAGAGACTTCCTaGATCAACATCTTTGGCATAACCCAAATCAATTAT | + |
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Preference number: 6 (lower is better) Translates to: LQCSHKRCTETS*INIFGITQINY Trigger: ATAATTGATTTGGGTTATGCCAAAGATGTTGATCAAGGAAGTCTCTGTACATCTTTTGTGGGAACATTGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CAA 90 bp | GGCCAAATACTGCAATGTTCCCACAAAAGATGTACAGAGACTTCCTaGATCAACATCTTTGGCATAACCCAAATCAATTATTTTATGTAT | + |
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Preference number: 6 (lower is better) Translates to: GQILQCSHKRCTETS*INIFGITQINYFMY Trigger: ATACATAAAATAATTGATTTGGGTTATGCCAAAGATGTTGATCAAGGAAGTCTCTGTACATCTTTTGTGGGAACATTGCAGTATTTGGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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| CDS CAA 72 bp | TTCAGCCCATACTTTCCGCAGCTGTATAATTGGCAGTaGTATTTTGCTGTCTTGTACAATATAATTTACACA | + |
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Preference number: 6 (lower is better) Translates to: FSPYFPQLYNWQ*YFAVLYNIIYT Trigger: TGTGTAAATTATATTGTACAAGACAGCAAAATACAACTGCCAATTATACAGCTGCGGAAAGTATGGGCTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026217.11 ENSMUST00000119591.2 |
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