Pregenerated sensors for CHTOP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001017Ensembl transcript IDs: ENSMUST00000001043.14, ENSMUST00000049937.13, ENSMUST00000076639.11, ENSMUST00000107342.2, ENSMUST00000107343.8, ENSMUST00000107344.8, ENSMUST00000107346.8, ENSMUST00000131868.2, ENSMUST00000146740.8
Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTaGGAGGTGCAGAAGCCTCTTGGGCATGAGACAGAAAGCCAAAAG | + |
|
Preference number: 1 (lower is better) Translates to: VSSATCATPTAASSL*EVQKPLGHETESQK Trigger: CTTTTGGCTTTCTGTCTCATGCCCAAGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR GCA 90 bp | CTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGAGAGGTaGAGAAGCCTCTTGGGCATGAGACAGAAAGCCAAAAGGAGAGAT | + |
|
Preference number: 1 (lower is better) Translates to: LPLVLHQQLLLLCER*RSLLGMRQKAKRRD Trigger: ATCTCTCCTTTTGGCTTTCTGTCTCATGCCCAAGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR GCA 90 bp | GTCAGTTTGTTACCAGTTTCCCACTCTTGTCTCTTCTGCCACTTGTaGTACACCAACAGCTGCTTCTTCTCTGTGAGAGGTGCAGAAGCC | + |
|
Preference number: 1 (lower is better) Translates to: VSLLPVSHSCLFCHL*YTNSCFFSVRGAEA Trigger: GGCTTCTGCACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGGGAAACTGGTAACAAACTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR GCA 90 bp | TTCCCAGCAGTCAGTTTGTTACCAGTTTCCCACTCTTGTCTCTTCTaGCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGAGAGGT | + |
|
Preference number: 1 (lower is better) Translates to: FPAVSLLPVSHSCLF*HLCYTNSCFFSVRG Trigger: ACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGGGAAACTGGTAACAAACTGACTGCTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR CCA 90 bp | TGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTaGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCC | + |
|
Preference number: 1 (lower is better) Translates to: WLNLNLQEGQIKPVK*KVTALQHEQHMSPS Trigger: GGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR TCA 90 bp | TGTCAGCTACCATCTATGTGGTTTCAATGTAGGCAACATCAACTTTaGCCAAATCAAAGTTGGTACCACGTGTTACCCATTCTGTGGCCC | + |
|
Preference number: 1 (lower is better) Translates to: CQLPSMWFQCRQHQL*PNQSWYHVLPILWP Trigger: GGGCCACAGAATGGGTAACACGTGGTACCAACTTTGATTTGGTCAAAGTTGATGTTGCCTACATTGAAACCACATAGATGGTAGCTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGCAGTCACTAAATGCACCAACTaGTGGCAGGTAAGTCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: VEGNCTSARAAHEPFPAVTKCTN*WQVSPQ Trigger: CTGTGGACTTACCTGCCACCAGTTGGTGCATTTAGT...GACTGCTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR CAA 90 bp | TGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGCAGTCAGTTaGTTACCAGTTTCCCACTCTTGTCTCTTCTGCCACTTGTGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: CTSARAAHEPFPAVS*LPVSHSCLFCHLCY Trigger: GTAGCACAAGTGGCAGAAGAGACAAGAGTGGGAAACTGGTAACAAACTGACTGCTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR TCA 90 bp | CGAGCAGCACATGAGCCCTTCCCAGCAGTCAGTTTGTTACCAGTTTCCCACTCTGAAGCCTCTTGGGCATaGGACAGAAAGCCAAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RAAHEPFPAVSLLPVSHSEASWA*DRKPKG Trigger: TCCTTTTGGCTTTCTGTCTCATGCCCAAGAGGCTTC...AGAGTGGGAAACTGGTAACAAACTGACTGCTGGGAAGGGCTCATGTGCTGCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR GCA 90 bp | CGAGCAGCACATGAGCCCTTCCCAGCAGTCAGTTTGTTACCAGTTTCCCACTCTCTCTTCTGCCACTTGTaGTACACCAACAGCTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: RAAHEPFPAVSLLPVSHSLFCHL*YTNSCF Trigger: GAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAG...AGAGTGGGAAACTGGTAACAAACTGACTGCTGGGAAGGGCTCATGTGCTGCTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTAAGTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGAAATGCACCAACTGGTaGCAGGTAAGTCCACAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: VKWKVTALQHEQHMSPSQKCTNW*QVSPQP Trigger: AGGCTGTGGACTTACCTGCCACCAGTTGGTGCATTT...CTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTAAGTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGTGCTACACCAACAGCTaGTTCTTCTCTGTGAGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: VKWKVTALQHEQHMSPSQCYTNS*FFSVRG Trigger: ACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCA...CTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCAGTTAAGTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTCTCTTCTGCCACTTGTaGTACACCAACAGCTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: KPVKWKVTALQHEQHMSPLFCHL*YTNSCF Trigger: GAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAG...AGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAACTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGCAGTCAATGTCAAGAGTATATaGCAGGCAGAGGCTAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: VEGNCTSARAAHEPFPAVNVKSI*QAEARK Trigger: TTTTCTAGCCTCTGCCTGTCATATACTCTTGACATT...GACTGCTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTTGGGCATGAGACAGAAAGCCACAGAACAGACTAAATaGACCAACTGGTGGCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LLLLCERCRSLLGMRQKATEQTK*TNWWQV Trigger: TACCTGCCACCAGTTGGTGCATTTAGTCTGTTCTGT...GGCTTTCTGTCTCATGCCCAAGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTAAATGCACCAACTGGTaGCAGGTAAGTCCACAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SHSCLFCHLCYTNSCFFSKCTNW*QVSPQP Trigger: AGGCTGTGGACTTACCTGCCACCAGTTGGTGCATTT...AGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR CAA 90 bp | GCAGTCAGTTTGTTACCAGTTTCCCACTCTTGTCTCTTCTGCCACTaGTGCTACACCAACAGCTGCTTCTTCTCTGTGAGAGGTGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: AVSLLPVSHSCLFCH*CYTNSCFFSVRGAE Trigger: TTCTGCACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGGGAAACTGGTAACAAACTGACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGCAGAGGCTAGAAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCACTAAATGCACCAACTaGTGGCAGGTAAGTCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: DRQRLENCSTHKANAFLFTKCTN*WQVSPQ Trigger: CTGTGGACTTACCTGCCACCAGTTGGTGCATTTAGT...GAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTTCTAGCCTCTGCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| 3UTR-3UTR TCA 90 bp | CGAGCAGCACATGAGCCCTTCCCAGCAGTCAGTTTGTTACCAGTTTCCCACTCTAGGCAACATCAACTTTaGCCAAATCAAAGTTGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: RAAHEPFPAVSLLPVSHSRQHQL*PNQSWY Trigger: GTACCAACTTTGATTTGGTCAAAGTTGATGTTGCCT...AGAGTGGGAAACTGGTAACAAACTGACTGCTGGGAAGGGCTCATGTGCTGCTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGGTAAGCACGAGCAGCACATaGGCCCTTCCCAGCAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: WLNLNLQEGQIKPVKWKVSTSST*ALPSSQ Trigger: CTGACTGCTGGGAAGGGCTCATGTGCTGCTCGTGCT...TACCTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAACTTTGACCAAATCAAAGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGACTAAATGCACCAACTaGTGGCAGGTAAGTCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: STLTKSKLVPRVTHSVAQTKCTN*WQVSPQ Trigger: CTGTGGACTTACCTGCCACCAGTTGGTGCATTTAGT...CTGGGCCACAGAATGGGTAACACGTGGTACCAACTTTGATTTGGTCAAAGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTAAATGCACCAACTGGTaGCAGGTAAGTCCACAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: KTVLLTRPTHSCSNRYLGKCTNW*QVSPQP Trigger: AGGCTGTGGACTTACCTGCCACCAGTTGGTGCATTT...ACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| 3UTR-3UTR CCA 90 bp | CACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTAACTCTAGCTCCTTCTaGGATCATAAAAATCAACAG | + |
|
Preference number: 2 (lower is better) Translates to: HLCYTNSCFFSVRGAEASNSSSF*DHKNQQ Trigger: CTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTT...AGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTCAGCTACCATCTATGTaGTTTCAATGTAGGCAACAT | + |
|
Preference number: 2 (lower is better) Translates to: PLLSLLPLVLHQQLLLLCQLPSM*FQCRQH Trigger: ATGTTGCCTACATTGAAACCACATAGATGGTAGCTG...ACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTTGGGCATGAGACAGAAAGCCAATCTTTTCTTAGGGTaGAAATTCCAACTTAGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LLLLCERCRSLLGMRQKANLFLG*KFQLSL Trigger: CAAGCTAAGTTGGAATTTCCACCCTAAGAAAAGATT...GGCTTTCTGTCTCATGCCCAAGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCAATGTCAAGAGTATATaGCAGGCAGAGGCTAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SWYHVLPILWPSSNTNISNVKSI*QAEARK Trigger: TTTTCTAGCCTCTGCCTGTCATATACTCTTGACATT...GGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAACACGTGGTACCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR GCA 90 bp | AACTTTGACCAAATCAAAGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTAACAGAACAGACTAAATaGACCAACTGGTGGCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: NFDQIKVGTTCYPFCGPVTEQTK*TNWWQV Trigger: TACCTGCCACCAGTTGGTGCATTTAGTCTGTTCTGT...TACTGGGCCACAGAATGGGTAACACGTGGTACCAACTTTGATTTGGTCAAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACCACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGAAATGCACCAACTGGTaGCAGGTAAGTCCACAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RPPNSENSSSFWDHKNQQKCTNW*QVSPQP Trigger: AGGCTGTGGACTTACCTGCCACCAGTTGGTGCATTT...CTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTGGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTACTAAATGCACCAACTaGTGGCAGGTAAGTCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: KTVLLTRPTHSCSNRYLGTKCTN*WQVSPQ Trigger: CTGTGGACTTACCTGCCACCAGTTGGTGCATTTAGT...ACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| 3UTR-3UTR CCA 90 bp | CACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTAGATATCTGGGTGACTaGATAAACAACAAAACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: HLCYTNSCFFSVRGAEASRYLGD*INNKTN Trigger: GTTTGTTTTGTTGTTTATCCAGTCACCCAGATATCT...AGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTAACTCTAGCTCCTTCTaGGATCATAAAAATCAACAG | + |
|
Preference number: 2 (lower is better) Translates to: PLLSLLPLVLHQQLLLLCNSSSF*DHKNQQ Trigger: CTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTT...ACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | CACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTAATCTTTTCTTAGGGTaGAAATTCCAACTTAGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: HLCYTNSCFFSVRGAEASNLFLG*KFQLSL Trigger: CAAGCTAAGTTGGAATTTCCACCCTAAGAAAAGATT...AGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTACAGAACAGACTAAATaGACCAACTGGTGGCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: KTVLLTRPTHSCSNRYLGTEQTK*TNWWQV Trigger: TACCTGCCACCAGTTGGTGCATTTAGTCTGTTCTGT...ACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| 3UTR-3UTR TCA 90 bp | ATATGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGGAAGCCTCTTGGGCATaGGACAGAAAGCCAAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: IWLNLNLQEGQIKPVKWKEASWA*DRKPKG Trigger: TCCTTTTGGCTTTCTGTCTCATGCCCAAGAGGCTTC...CTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | ATATGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGAAATGCACCAACTGGTaGCAGGTAAGTCCACAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: IWLNLNLQEGQIKPVKWKKCTNW*QVSPQP Trigger: AGGCTGTGGACTTACCTGCCACCAGTTGGTGCATTT...CTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGGTAACAGAACAGACTAAATaGACCAACTGGTGGCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: WLNLNLQEGQIKPVKWKVTEQTK*TNWWQV Trigger: TACCTGCCACCAGTTGGTGCATTTAGTCTGTTCTGT...TACCTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTCCTGTTCAAACAGATATCTGGGTGACTGGATAAACAACAAAACAAACTCAACTAAATGCACCAACTaGTGGCAGGTAAGTCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: HSCSNRYLGDWINNKTNSTKCTN*WQVSPQ Trigger: CTGTGGACTTACCTGCCACCAGTTGGTGCATTTAGT...TGAGTTTGTTTTGTTGTTTATCCAGTCACCCAGATATCTGTTTGAACAGGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| 3UTR-3UTR CCA 90 bp | AACTTTGACCAAATCAAAGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTAAACTCTAGCTCCTTCTaGGATCATAAAAATCAACAG | + |
|
Preference number: 2 (lower is better) Translates to: NFDQIKVGTTCYPFCGPVNSSSF*DHKNQQ Trigger: CTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTT...TACTGGGCCACAGAATGGGTAACACGTGGTACCAACTTTGATTTGGTCAAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR TCA 90 bp | CACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGAGGAAATGTCAAGAGTATATaGCAGGCAGAGGCTAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HPIVKTLAPSGIIKINRGNVKSI*QAEARK Trigger: TTTTCTAGCCTCTGCCTGTCATATACTCTTGACATT...TCCTCTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAATACCAACATTTCCAATTTACTACCTTCACTATCAACATAGCAAACACACCACAGAACAGACTAAATaGACCAACTGGTGGCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: AIPTFPIYYLHYQHSKHTTEQTK*TNWWQV Trigger: TACCTGCCACCAGTTGGTGCATTTAGTCTGTTCTGT...GGTGTGTTTGCTATGTTGATAGTGAAGGTAGTAAATTGGAAATGTTGGTATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGGTAAATGTCAAGAGTATATaGCAGGCAGAGGCTAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: WLNLNLQEGQIKPVKWKVNVKSI*QAEARK Trigger: TTTTCTAGCCTCTGCCTGTCATATACTCTTGACATT...TACCTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGGTAAACTCTAGCTCCTTCTaGGATCATAAAAATCAACAG | + |
|
Preference number: 2 (lower is better) Translates to: WLNLNLQEGQIKPVKWKVNSSSF*DHKNQQ Trigger: CTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTT...TACCTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCACTATCAACATAGATATCTGGGTGACTaGATAAACAACAAAACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: CGPVAIPTFPIYYLHYQHRYLGD*INNKTN Trigger: GTTTGTTTTGTTGTTTATCCAGTCACCCAGATATCT...ATGTTGATAGTGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | ATATGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGAACTCTAGCTCCTTCTaGGATCATAAAAATCAACAG | + |
|
Preference number: 2 (lower is better) Translates to: IWLNLNLQEGQIKPVKWKNSSSF*DHKNQQ Trigger: CTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTT...CTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGGTAAATCTTTTCTTAGGGTaGAAATTCCAACTTAGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: WLNLNLQEGQIKPVKWKVNLFLG*KFQLSL Trigger: CAAGCTAAGTTGGAATTTCCACCCTAAGAAAAGATT...TACCTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CCA 90 bp | ATATGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGAGATATCTGGGTGACTaGATAAACAACAAAACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: IWLNLNLQEGQIKPVKWKRYLGD*INNKTN Trigger: GTTTGTTTTGTTGTTTATCCAGTCACCCAGATATCT...CTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR TCA 72 bp | GCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTaGGAGGTGCAGAAGCCTCTTGGGCATGAGACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ATCATPTAASSL*EVQKPLGHETE Trigger: TTCTGTCTCATGCCCAAGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTAGGTGCAGAAGCCTCTaGGGCATGAGACAGAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SHSCLFCHLCYTNSCFFSRCRSL*GMRQKA Trigger: GGCTTTCTGTCTCATGCCCAAGAGGCTTCTGCACCT...AGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR GCA 72 bp | GTGCTACACCAACAGCTGCTTCTTCTCTGTGAGAGGTaGAGAAGCCTCTTGGGCATGAGACAGAAAGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VLHQQLLLLCER*RSLLGMRQKAK Trigger: TTTGGCTTTCTGTCTCATGCCCAAGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR GCA 72 bp | TCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTaGTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SCLFCHLCYTNS*FFSVRGAEASW Trigger: CCAAGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR GCA 72 bp | TTACCAGTTTCCCACTCTTGTCTCTTCTGCCACTTGTaGTACACCAACAGCTGCTTCTTCTCTGTGAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LPVSHSCLFCHL*YTNSCFFSVRG Trigger: ACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGGGAAACTGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGGTAAGGTGCAGAAGCCTCTaGGGCATGAGACAGAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: WLNLNLQEGQIKPVKWKVRCRSL*GMRQKA Trigger: GGCTTTCTGTCTCATGCCCAAGAGGCTTCTGCACCT...TACCTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR CCA 72 bp | TTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTaGAAGGTAACTGCACTTCAGCACGAGCAGCACATG | + |
|
Preference number: 3 (lower is better) Translates to: LNLQEGQIKPVK*KVTALQHEQHM Trigger: CATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGGTAACCAGTTTCCCACTCTaGTCTCTTCTGCCACTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: WLNLNLQEGQIKPVKWKVTSFPL*SLLPLV Trigger: CACAAGTGGCAGAAGAGACAAGAGTGGGAAACTGGT...TACCTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR CCA 72 bp | CCAAATCAAAGTTGGTACCACGTGTTACCCATTCTGTaGCCCAGTAGCAATACCAACATTTCCAATTTACTA | + |
|
Preference number: 3 (lower is better) Translates to: PNQSWYHVLPIL*PSSNTNISNLL Trigger: TAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAACACGTGGTACCAACTTTGATTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR TCA 72 bp | CCATCTATGTGGTTTCAATGTAGGCAACATCAACTTTaGCCAAATCAAAGTTGGTACCACGTGTTACCCATT | + |
|
Preference number: 3 (lower is better) Translates to: PSMWFQCRQHQL*PNQSWYHVLPI Trigger: AATGGGTAACACGTGGTACCAACTTTGATTTGGTCAAAGTTGATGTTGCCTACATTGAAACCACATAGATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR TCA 72 bp | AAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTaGCTGGATAAACAACAAAACAAACTCAACCAAATT | + |
|
Preference number: 3 (lower is better) Translates to: KANAFLFKQISG*LDKQQNKLNQI Trigger: AATTTGGTTGAGTTTGTTTTGTTGTTTATCCAGTCACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| 3UTR CCA 72 bp | GGAGAGATTTATAAGCTTAAAAATCTTTTCTTAGGGTaGAAATTCCAACTTAGCTTGTCAGCTACCATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: GEIYKLKNLFLG*KFQLSLSATIY Trigger: ATAGATGGTAGCTGACAAGCTAAGTTGGAATTTCCACCCTAAGAAAAGATTTTTAAGCTTATAAATCTCTCC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR TCA 90 bp | GTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGCAGTCTCAATACAGGGCGAGTaGGGGCACCTCTCCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VEGNCTSARAAHEPFPAVSIQGE*GHLSLG Trigger: GCCGAGGGAGAGGTGCCCTCACTCGCCCTGTATTGA...GACTGCTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGCAGTCCACGACCTCGGCCTCTaGCTCCAAAGCCCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VEGNCTSARAAHEPFPAVHDLGL*LQSPLF Trigger: GAAGAGGGGGCTTTGGAGGCAGAGGCCGAGGTCGTG...GACTGCTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGCAGTCGCTAGCTGCTGCTGCTaGTGCATCGAAGCCCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: VEGNCTSARAAHEPFPAVASCCC*CIEARI Trigger: TATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGC...GACTGCTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTTGGGCATGAGACAGAAAGCCGCACTGGCTAGCTGCTaGTGCTGCTGCATCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLCERCRSLLGMRQKAALASC*CCCIEA Trigger: GGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGC...GGCTTTCTGTCTCATGCCCAAGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGTTAAGTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTCACGACCTCGGCCTCTaGCTCCAAAGCCCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPVKWKVTALQHEQHMSPHDLGL*LQSPLF Trigger: GAAGAGGGGGCTTTGGAGGCAGAGGCCGAGGTCGTG...AGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAACTGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGCAGTCCGGGGCAAGCCTCTCTaGATTATGGGTAGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VEGNCTSARAAHEPFPAVRGKPL*IMGRPL Trigger: AAGAGGCCTACCCATAATCCAGAGAGGCTTGCCCCG...GACTGCTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | CGAGCAGCACATGAGCCCTTCCCAGCAGTCAGTTTGTTACCAGTTTCCCACTCTCTGGCACTGGCTAGCTaGTGCTGCTGCTGCATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RAAHEPFPAVSLLPVSHSLALAS*CCCCIE Trigger: TTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAG...AGAGTGGGAAACTGGTAACAAACTGACTGCTGGGAAGGGCTCATGTGCTGCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | GACAGGCAGAGGCTAGAAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCTGGCCAGGGCACCTATaGGTCGGCCTAACCGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRQRLENCSTHKANAFLFWPGHL*VGLTVP Trigger: AGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCA...GAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTTCTAGCCTCTGCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR TCA 90 bp | AGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCTCAATACAGGGCGAGTaGGGGCACCTCTCCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SWYHVLPILWPSSNTNISSIQGE*GHLSLG Trigger: GCCGAGGGAGAGGTGCCCTCACTCGCCCTGTATTGA...GGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAACACGTGGTACCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | CACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGCTGGCTAGCTGCTGCTaGTGCTGCATCGAAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HSCLFCHLCYTNSCFFSVLASCC*CCIEAR Trigger: TCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAG...CACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGTTAAGTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTCTGGCACTGGCTAGCTaGTGCTGCTGCTGCATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPVKWKVTALQHEQHMSPLALAS*CCCCIE Trigger: TTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAG...AGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAACTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR CAA 72 bp | GCACGAGCAGCACATGAGCCCTTCCCAGCAGTCAGTTaGTTACCAGTTTCCCACTCTTGTCTCTTCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARAAHEPFPAVS*LPVSHSCLFCH Trigger: GTGGCAGAAGAGACAAGAGTGGGAAACTGGTAACAAACTGACTGCTGGGAAGGGCTCATGTGCTGCTCGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR TCA 90 bp | TCAACTTTGACCAAATCAAAGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTCAATACAGGGCGAGTaGGGGCACCTCTCCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: STLTKSKLVPRVTHSVAQSIQGE*GHLSLG Trigger: GCCGAGGGAGAGGTGCCCTCACTCGCCCTGTATTGA...CTGGGCCACAGAATGGGTAACACGTGGTACCAACTTTGATTTGGTCAAAGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTTGGGCATGAGACAGAAAGCCAGCTGCTGCTGCTGCTaGATCGAAGCCCGAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLCERCRSLLGMRQKASCCCC*IEARIF Trigger: GAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCT...GGCTTTCTGTCTCATGCCCAAGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCCTGGCTAGCTGCTGCTaGTGCTGCATCGAAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SWYHVLPILWPSSNTNISLASCC*CCIEAR Trigger: TCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAG...GGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAACACGTGGTACCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | CACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGCTGGCACTGGCTAGCTaGTGCTGCTGCTGCATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSCLFCHLCYTNSCFFSVLALAS*CCCCIE Trigger: TTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAG...CACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTCGGGGCAAGCCTCTCTaGATTATGGGTAGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLCYTNSCFFSVRGAEASRGKPL*IMGRPL Trigger: AAGAGGCCTACCCATAATCCAGAGAGGCTTGCCCCG...AGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR TCA 90 bp | AACTTTGACCAAATCAAAGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTATCAATACAGGGCGAGTaGGGGCACCTCTCCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NFDQIKVGTTCYPFCGPVSIQGE*GHLSLG Trigger: GCCGAGGGAGAGGTGCCCTCACTCGCCCTGTATTGA...TACTGGGCCACAGAATGGGTAACACGTGGTACCAACTTTGATTTGGTCAAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGTTAAGTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTAGCTGCTGCTGCTGCTaGATCGAAGCCCGAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: KPVKWKVTALQHEQHMSPSCCCC*IEARIF Trigger: GAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCT...AGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAACTGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | CACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGGCTAGCTGCTGCTGCTaGTGCATCGAAGCCCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: HSCLFCHLCYTNSCFFSVASCCC*CIEARI Trigger: TATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGC...CACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | TCCCACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGCTAGCTGCTGCTGCTaGTGCATCGAAGCCCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SHSCLFCHLCYTNSCFFSASCCC*CIEARI Trigger: TATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGC...AGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | TTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTGACTGGACTGGCTAGCTGCTGCTaGTGCTGCATCGAAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FYSQGQRIPVQTDIWVTGLASCC*CCIEAR Trigger: TCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAG...TCCAGTCACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGAGGCTAGAAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAACTGGCACTGGCTAGCTaGTGCTGCTGCTGCATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QAEARKLFYSQGQRIPVQLALAS*CCCCIE Trigger: TTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAG...TTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTTCTAGCCTCTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | ACCACGTGTTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCAATTTACCACGACCTCGGCCTCTaGCTCCAAAGCCCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTCYPFCGPVAIPTFPIYHDLGL*LQSPLF Trigger: GAAGAGGGGGCTTTGGAGGCAGAGGCCGAGGTCGTG...GTAAATTGGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAACACGTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGCAGTCAGCCCGAATATTCACTaGCATCGGCTGTTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VEGNCTSARAAHEPFPAVSPNIH*HRLFVL Trigger: AAGAACAAACAGCCGATGCCAGTGAATATTCGGGCT...GACTGCTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCAGTTAAGTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTCCAGTCTTCTGTTTCTaGCACTGGCTAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPVKWKVTALQHEQHMSPPVFCF*HWLAAA Trigger: AGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGG...AGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAACTGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | TTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTGACTGGACTCCAATTGCTCCCCTaGCCAGGGCACCTATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FYSQGQRIPVQTDIWVTGLQLLP*PGHLWV Trigger: GACCCATAGGTGCCCTGGCCAGGGGAGCAATTGGAG...TCCAGTCACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGCGGGGCAAGCCTCTCTaGATTATGGGTAGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSCLFCHLCYTNSCFFSVRGKPL*IMGRPL Trigger: AAGAGGCCTACCCATAATCCAGAGAGGCTTGCCCCG...CACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR TCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGTCAATACAGGGCGAGTaGGGGCACCTCTCCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRSIQGE*GHLSLG Trigger: GCCGAGGGAGAGGTGCCCTCACTCGCCCTGTATTGA...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCGCTAGCTGCTGCTGCTaGTGCATCGAAGCCCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SWYHVLPILWPSSNTNISASCCC*CIEARI Trigger: TATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGC...GGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAACACGTGGTACCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | ACCACGTGTTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCAATTTACCTGGCTAGCTGCTGCTaGTGCTGCATCGAAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TTCYPFCGPVAIPTFPIYLASCC*CCIEAR Trigger: TCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAG...GTAAATTGGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAACACGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTTGGGCATGAGACAGAAAGCCGGTCTATTCTCCATCTaGTGGGCCAGTCTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLCERCRSLLGMRQKAGLFSI*WASLLF Trigger: AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACC...GGCTTTCTGTCTCATGCCCAAGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGCACGACCTCGGCCTCTaGCTCCAAAGCCCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRHDLGL*LQSPLF Trigger: GAAGAGGGGGCTTTGGAGGCAGAGGCCGAGGTCGTG...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | CGAGCAGCACATGAGCCCTTCCCAGCAGTCAGTTTGTTACCAGTTTCCCACTCTAATTGGTTGTCCAGCTaGTCCTTGGTCAATACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAAHEPFPAVSLLPVSHSNWLSS*SLVNTG Trigger: CCCTGTATTGACCAAGGAGCAGCTGGACAACCAATT...AGAGTGGGAAACTGGTAACAAACTGACTGCTGGGAAGGGCTCATGTGCTGCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | GTTAAGTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGAATTGGTTGTCCAGCTaGTCCTTGGTCAATACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKWKVTALQHEQHMSPSQNWLSS*SLVNTG Trigger: CCCTGTATTGACCAAGGAGCAGCTGGACAACCAATT...CTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGCGGCCTAACCGTGCCTaGATATTACTCTTACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSCLFCHLCYTNSCFFSVRPNRA*ILLLPR Trigger: CCTGGGTAAGAGTAATATCCAGGCACGGTTAGGCCG...CACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | TCCCACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTCGGCCTAACCGTGCCTaGATATTACTCTTACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSCLFCHLCYTNSCFFSRPNRA*ILLLPR Trigger: CCTGGGTAAGAGTAATATCCAGGCACGGTTAGGCCG...AGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | GACAGGCAGAGGCTAGAAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCCGGCCTAACCGTGCCTaGATATTACTCTTACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DRQRLENCSTHKANAFLFRPNRA*ILLLPR Trigger: CCTGGGTAAGAGTAATATCCAGGCACGGTTAGGCCG...GAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTTCTAGCCTCTGCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTTGGCCAGGGCACCTATaGGTCGGCCTAACCGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTVLLTRPTHSCSNRYLGWPGHL*VGLTVP Trigger: AGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCA...ACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGTGGCCAGGGCACCTATaGGTCGGCCTAACCGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRWPGHL*VGLTVP Trigger: AGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCA...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGAGGCTAGAAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAACGGGGCAAGCCTCTCTaGATTATGGGTAGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QAEARKLFYSQGQRIPVQRGKPL*IMGRPL Trigger: AAGAGGCCTACCCATAATCCAGAGAGGCTTGCCCCG...TTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTTCTAGCCTCTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGCTGGCTAGCTGCTGCTaGTGCTGCATCGAAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRLASCC*CCIEAR Trigger: TCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAG...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGGCACTGGCTAGCTGCTaGTGCTGCTGCATCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRALASC*CCCIEA Trigger: GGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGC...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTGCACTGGCTAGCTGCTaGTGCTGCTGCATCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KTVLLTRPTHSCSNRYLGALASC*CCCIEA Trigger: GGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGC...ACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | CACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTGGTCTATTCTCCATCTaGTGGGCCAGTCTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HLCYTNSCFFSVRGAEASGLFSI*WASLLF Trigger: AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACC...AGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | TTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCACACGACCTCGGCCTCTaGCTCCAAAGCCCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPILWPSSNTNISNLLPSHDLGL*LQSPLF Trigger: GAAGAGGGGGCTTTGGAGGCAGAGGCCGAGGTCGTG...TGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGCAGTCAGTTTTCGACATGTATaGATCCAATTGGTTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEGNCTSARAAHEPFPAVSFRHV*IQLVVQ Trigger: CTGGACAACCAATTGGATGCATACATGTCGAAAACT...GACTGCTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | CGAGCAGCACATGAGCCCTTCCCAGCAGTCAGTTTGTTACCAGTTTCCCACTCTAGTTTTAATGCTGCCTaGACAGAGGGTCTATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAAHEPFPAVSLLPVSHSSFNAA*TEGLFS Trigger: GGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACT...AGAGTGGGAAACTGGTAACAAACTGACTGCTGGGAAGGGCTCATGTGCTGCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGCTCCAATTGCTCCCCTaGCCAGGGCACCTATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRLQLLP*PGHLWV Trigger: GACCCATAGGTGCCCTGGCCAGGGGAGCAATTGGAG...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTCTCCAATTGCTCCCCTaGCCAGGGCACCTATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KTVLLTRPTHSCSNRYLGLQLLP*PGHLWV Trigger: GACCCATAGGTGCCCTGGCCAGGGGAGCAATTGGAG...ACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | TCCCACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTAGCCTCTCTGGATTATaGGTAGGCCTCTTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SHSCLFCHLCYTNSCFFSSLSGL*VGLFLQ Trigger: TTGGAGGAAGAGGCCTACCCATAATCCAGAGAGGCT...AGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTTGGGCATGAGACAGAAAGCCATGTATGCATCCAATTaGTTGTCCAGCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLCERCRSLLGMRQKAMYASN*LSSCSL Trigger: CAAGGAGCAGCTGGACAACCAATTGGATGCATACAT...GGCTTTCTGTCTCATGCCCAAGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | CGAGCAGCACATGAGCCCTTCCCAGCAGTCAGTTTGTTACCAGTTTCCCACTCTATGTATGCATCCAATTaGTTGTCCAGCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAAHEPFPAVSLLPVSHSMYASN*LSSCSL Trigger: CAAGGAGCAGCTGGACAACCAATTGGATGCATACAT...AGAGTGGGAAACTGGTAACAAACTGACTGCTGGGAAGGGCTCATGTGCTGCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| 3UTR CAA 72 bp | CTTCCCAGCAGTCAGTTTGTTACCAGTTTCCCACTCTaGTCTCTTCTGCCACTTGTGCTACACCAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSSQFVTSFPL*SLLPLVLHQQL Trigger: CAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGGGAAACTGGTAACAAACTGACTGCTGGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | TTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCAGCACTGGCTAGCTGCTaGTGCTGCTGCATCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPILWPSSNTNISNLLPSALASC*CCCIEA Trigger: GGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGC...TGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | CACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGAGGAGCACTGGCTAGCTGCTaGTGCTGCTGCATCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HPIVKTLAPSGIIKINRGALASC*CCCIEA Trigger: GGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGC...TCCTCTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | AGACCACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGGCACTGGCTAGCTGCTaGTGCTGCTGCATCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPPNSENSSSFWDHKNQQALASC*CCCIEA Trigger: GGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGC...CTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTCTGGCACTGGCTAGCTaGTGCTGCTGCTGCATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTVLLTRPTHSCSNRYLGLALAS*CCCCIE Trigger: TTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAG...ACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGCTGGCACTGGCTAGCTaGTGCTGCTGCTGCATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRLALAS*CCCCIE Trigger: TTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAG...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | CACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGGGTCTATTCTCCATCTaGTGGGCCAGTCTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSCLFCHLCYTNSCFFSVGLFSI*WASLLF Trigger: AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACC...CACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCACTATCAACATCACGACCTCGGCCTCTaGCTCCAAAGCCCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CGPVAIPTFPIYYLHYQHHDLGL*LQSPLF Trigger: GAAGAGGGGGCTTTGGAGGCAGAGGCCGAGGTCGTG...ATGTTGATAGTGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | AAAGACCACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACCACGACCTCGGCCTCTaGCTCCAAAGCCCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KDHPIVKTLAPSGIIKINHDLGL*LQSPLF Trigger: GAAGAGGGGGCTTTGGAGGCAGAGGCCGAGGTCGTG...GTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTGGTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | CCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGAGGAAATGGCCAGGGCACCTATaGGTCGGCCTAACCGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PNSENSSSFWDHKNQQRKWPGHL*VGLTVP Trigger: AGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCA...TTTCCTCTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCACTATCAACATTGGCCAGGGCACCTATaGGTCGGCCTAACCGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CGPVAIPTFPIYYLHYQHWPGHL*VGLTVP Trigger: AGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCA...ATGTTGATAGTGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | TTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCACTCCAATTGCTCCCCTaGCCAGGGCACCTATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPILWPSSNTNISNLLPSLQLLP*PGHLWV Trigger: GACCCATAGGTGCCCTGGCCAGGGGAGCAATTGGAG...TGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | AGACCACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGCTCCAATTGCTCCCCTaGCCAGGGCACCTATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPPNSENSSSFWDHKNQQLQLLP*PGHLWV Trigger: GACCCATAGGTGCCCTGGCCAGGGGAGCAATTGGAG...CTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | AACTTTGACCAAATCAAAGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTAAGCTGCTGCTGCTGCTaGATCGAAGCCCGAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: NFDQIKVGTTCYPFCGPVSCCCC*IEARIF Trigger: GAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCT...TACTGGGCCACAGAATGGGTAACACGTGGTACCAACTTTGATTTGGTCAAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGGCTAGCTGCTGCTGCTaGTGCATCGAAGCCCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRASCCC*CIEARI Trigger: TATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGC...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTGCTAGCTGCTGCTGCTaGTGCATCGAAGCCCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: KTVLLTRPTHSCSNRYLGASCCC*CIEARI Trigger: TATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGC...ACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCGGTCTATTCTCCATCTaGTGGGCCAGTCTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SWYHVLPILWPSSNTNISGLFSI*WASLLF Trigger: AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACC...GGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAACACGTGGTACCAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGAGGCTAGAAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAACTCTTACCCAGGCGCTaGTTTAAGCTCTTCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QAEARKLFYSQGQRIPVQLLPRR*FKLFCL Trigger: TAAGCAGAAGAGCTTAAAGCAGCGCCTGGGTAAGAG...TTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTTCTAGCCTCTGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | GTTAAGTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGAGTTTTCGACATGTATaGATCCAATTGGTTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VKWKVTALQHEQHMSPSQSFRHV*IQLVVQ Trigger: CTGGACAACCAATTGGATGCATACATGTCGAAAACT...CTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGAGGCTAGAAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAACTCTTACCCAGGCGCTaGTTTAAGCTCTGCTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QAEARKLFYSQGQRIPVQLLPRR*FKLCLS Trigger: ACTTAAGCAGAGCTTAAAGCAGCGCCTGGGTAAGAG...TTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTTCTAGCCTCTGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076639.11 |
||
| CDS-3UTR CCA 90 bp | AACTTTGACCAAATCAAAGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTATTCTGTTTCTGGCACTaGCTAGCTGCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NFDQIKVGTTCYPFCGPVFCFWH*LAAAAA Trigger: AGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAA...TACTGGGCCACAGAATGGGTAACACGTGGTACCAACTTTGATTTGGTCAAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGAGTTTTAATGCTGCCTaGACAGAGGGTCTATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSCLFCHLCYTNSCFFSVSFNAA*TEGLFS Trigger: GGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACT...CACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | CCACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTAGTTTTAATGCTGCCTaGACAGAGGGTCTATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLSLLPLVLHQQLLLLCSFNAA*TEGLFS Trigger: GGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACT...ACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGCGGGGCAAGCCTCTCTaGATTATGGGTAGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRRGKPL*IMGRPL Trigger: AAGAGGCCTACCCATAATCCAGAGAGGCTTGCCCCG...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | GACAGGCAGAGGCTAGAAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCATGTATGCATCCAATTaGTTGTCCAGCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRQRLENCSTHKANAFLFMYASN*LSSCSL Trigger: CAAGGAGCAGCTGGACAACCAATTGGATGCATACAT...GAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTTCTAGCCTCTGCCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGAGCTGCTGCTGCTGCTaGATCGAAGCCCGAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRSCCCC*IEARIF Trigger: GAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCT...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTAGCTGCTGCTGCTGCTaGATCGAAGCCCGAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: KTVLLTRPTHSCSNRYLGSCCCC*IEARIF Trigger: GAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCT...ACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | GCAATACCAACATTTCCAATTTACTACCTTCACTATCAACATAGCAAACACACCCTGGCTAGCTGCTGCTaGTGCTGCATCGAAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: AIPTFPIYYLHYQHSKHTLASCC*CCIEAR Trigger: TCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAG...GGTGTGTTTGCTATGTTGATAGTGAAGGTAGTAAATTGGAAATGTTGGTATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | CATTCCTGTTCAAACAGATATCTGGGTGACTGGATAAACAACAAAACAAACTCACTGGCTAGCTGCTGCTaGTGCTGCATCGAAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HSCSNRYLGDWINNKTNSLASCC*CCIEAR Trigger: TCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAG...TGAGTTTGTTTTGTTGTTTATCCAGTCACCCAGATATCTGTTTGAACAGGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | CCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGAGGAAACTGGCACTGGCTAGCTaGTGCTGCTGCTGCATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PNSENSSSFWDHKNQQRKLALAS*CCCCIE Trigger: TTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAG...TTTCCTCTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | TCAACTTTGACCAAATCAAAGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGGGTCTATTCTCCATCTaGTGGGCCAGTCTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: STLTKSKLVPRVTHSVAQGLFSI*WASLLF Trigger: AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACC...CTGGGCCACAGAATGGGTAACACGTGGTACCAACTTTGATTTGGTCAAAGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | TTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTGACTGGACTCTTACCCAGGCGCTaGTTTAAGCTCTTCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FYSQGQRIPVQTDIWVTGLLPRR*FKLFCL Trigger: TAAGCAGAAGAGCTTAAAGCAGCGCCTGGGTAAGAG...TCCAGTCACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | TTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTGACTGGAAATTGGTTGTCCAGCTaGTCCTTGGTCAATACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FYSQGQRIPVQTDIWVTGNWLSS*SLVNTG Trigger: CCCTGTATTGACCAAGGAGCAGCTGGACAACCAATT...TCCAGTCACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGAGGCTAGAAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAAGCCCGAATATTCACTaGCATCGGCTGTTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QAEARKLFYSQGQRIPVQSPNIH*HRLFVL Trigger: AAGAACAAACAGCCGATGCCAGTGAATATTCGGGCT...TTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTTCTAGCCTCTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTTTCTGTTTCTGGCACTaGCTAGCTGCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTVLLTRPTHSCSNRYLGFCFWH*LAAAAA Trigger: AGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAA...ACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGTTCTGTTTCTGGCACTaGCTAGCTGCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRFCFWH*LAAAAA Trigger: AGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAA...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | TACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCACTTCTGTTTCTGGCACTaGCTAGCTGCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YPFCGPVAIPTFPIYYLHFCFWH*LAAAAA Trigger: AGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAA...GTGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGCCAGTCTTCTGTTTCTaGCACTGGCTAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRPVFCF*HWLAAA Trigger: AGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGG...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGCGGCCTAACCGTGCCTaGATATTACTCTTACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRRPNRA*ILLLPR Trigger: CCTGGGTAAGAGTAATATCCAGGCACGGTTAGGCCG...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | GCAATACCAACATTTCCAATTTACTACCTTCACTATCAACATAGCAAACACACCCTCCAATTGCTCCCCTaGCCAGGGCACCTATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AIPTFPIYYLHYQHSKHTLQLLP*PGHLWV Trigger: GACCCATAGGTGCCCTGGCCAGGGGAGCAATTGGAG...GGTGTGTTTGCTATGTTGATAGTGAAGGTAGTAAATTGGAAATGTTGGTATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | AACTTTGACCAAATCAAAGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTAAGCCTCTCTGGATTATaGGTAGGCCTCTTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NFDQIKVGTTCYPFCGPVSLSGL*VGLFLQ Trigger: TTGGAGGAAGAGGCCTACCCATAATCCAGAGAGGCT...TACTGGGCCACAGAATGGGTAACACGTGGTACCAACTTTGATTTGGTCAAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | AGACCACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGCGGGGCAAGCCTCTCTaGATTATGGGTAGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPPNSENSSSFWDHKNQQRGKPL*IMGRPL Trigger: AAGAGGCCTACCCATAATCCAGAGAGGCTTGCCCCG...CTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTGGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGAGGCTAGAAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAATGTATGCATCCAATTaGTTGTCCAGCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAEARKLFYSQGQRIPVQMYASN*LSSCSL Trigger: CAAGGAGCAGCTGGACAACCAATTGGATGCATACAT...TTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTTCTAGCCTCTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| 3UTR CAA 72 bp | TTGTTACCAGTTTCCCACTCTTGTCTCTTCTGCCACTaGTGCTACACCAACAGCTGCTTCTTCTCTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLPVSHSCLFCH*CYTNSCFFSVR Trigger: TCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTGGGAAACTGGTAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | AAAATATGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGGCACTGGCTAGCTGCTaGTGCTGCTGCATCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KIWLNLNLQEGQIKPVKWALASC*CCCIEA Trigger: GGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGC...CCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCATATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | TTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCATTCTGTTTCTGGCACTaGCTAGCTGCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPILWPSSNTNISNLLPSFCFWH*LAAAAA Trigger: AGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAA...TGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | TTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTGACTGGAAGTTTTAATGCTGCCTaGACAGAGGGTCTATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FYSQGQRIPVQTDIWVTGSFNAA*TEGLFS Trigger: GGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACT...TCCAGTCACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | TACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCACAGCCTCTCTGGATTATaGGTAGGCCTCTTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YPFCGPVAIPTFPIYYLHSLSGL*VGLFLQ Trigger: TTGGAGGAAGAGGCCTACCCATAATCCAGAGAGGCT...GTGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGAGCCTCTCTGGATTATaGGTAGGCCTCTTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRSLSGL*VGLFLQ Trigger: TTGGAGGAAGAGGCCTACCCATAATCCAGAGAGGCT...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTAGCCTCTCTGGATTATaGGTAGGCCTCTTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KTVLLTRPTHSCSNRYLGSLSGL*VGLFLQ Trigger: TTGGAGGAAGAGGCCTACCCATAATCCAGAGAGGCT...ACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | AAAGACCACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACCGGGGCAAGCCTCTCTaGATTATGGGTAGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KDHPIVKTLAPSGIIKINRGKPL*IMGRPL Trigger: AAGAGGCCTACCCATAATCCAGAGAGGCTTGCCCCG...GTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTGGTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | TTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTGACTGGAATGTATGCATCCAATTaGTTGTCCAGCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FYSQGQRIPVQTDIWVTGMYASN*LSSCSL Trigger: CAAGGAGCAGCTGGACAACCAATTGGATGCATACAT...TCCAGTCACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGGGTCTATTCTCCATCTaGTGGGCCAGTCTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRGLFSI*WASLLF Trigger: AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACC...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTGGTCTATTCTCCATCTaGTGGGCCAGTCTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTVLLTRPTHSCSNRYLGGLFSI*WASLLF Trigger: AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACC...ACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGAATTGGTTGTCCAGCTaGTCCTTGGTCAATACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRNWLSS*SLVNTG Trigger: CCCTGTATTGACCAAGGAGCAGCTGGACAACCAATT...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGAGGCTAGAAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAAGTTTTCGACATGTATaGATCCAATTGGTTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAEARKLFYSQGQRIPVQSFRHV*IQLVVQ Trigger: CTGGACAACCAATTGGATGCATACATGTCGAAAACT...TTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTTCTAGCCTCTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGCTCTTACCCAGGCGCTaGTTTAAGCTCTGCTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRLLPRR*FKLCLS Trigger: ACTTAAGCAGAGCTTAAAGCAGCGCCTGGGTAAGAG...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076639.11 ENSMUST00000107342.2 |
||
| CDS-3UTR CCA 90 bp | TGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGGTATTCTGTTTCTGGCACTaGCTAGCTGCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLNLNLQEGQIKPVKWKVFCFWH*LAAAAA Trigger: AGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAA...TACCTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | CCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGAGGAAATTCTGTTTCTGGCACTaGCTAGCTGCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNSENSSSFWDHKNQQRKFCFWH*LAAAAA Trigger: AGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAA...TTTCCTCTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGGTACCAGTCTTCTGTTTCTaGCACTGGCTAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLNLNLQEGQIKPVKWKVPVFCF*HWLAAA Trigger: AGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGG...TACCTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | CCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGAGGAAACCAGTCTTCTGTTTCTaGCACTGGCTAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNSENSSSFWDHKNQQRKPVFCF*HWLAAA Trigger: AGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGG...TTTCCTCTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | ACCACGTGTTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCAATTTACAGTTTTAATGCTGCCTaGACAGAGGGTCTATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTCYPFCGPVAIPTFPIYSFNAA*TEGLFS Trigger: GGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACT...GTAAATTGGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAACACGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | AGACCACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGAGCCTCTCTGGATTATaGGTAGGCCTCTTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPPNSENSSSFWDHKNQQSLSGL*VGLFLQ Trigger: TTGGAGGAAGAGGCCTACCCATAATCCAGAGAGGCT...CTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTGGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | AAAATATGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGGCTAGCTGCTGCTGCTaGTGCATCGAAGCCCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: KIWLNLNLQEGQIKPVKWASCCC*CIEARI Trigger: TATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGC...CCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | CACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGAGGACTCTTACCCAGGCGCTaGTTTAAGCTCTTCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: HPIVKTLAPSGIIKINRGLLPRR*FKLFCL Trigger: TAAGCAGAAGAGCTTAAAGCAGCGCCTGGGTAAGAG...TCCTCTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | AGACCACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGAATTGGTTGTCCAGCTaGTCCTTGGTCAATACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPPNSENSSSFWDHKNQQNWLSS*SLVNTG Trigger: CCCTGTATTGACCAAGGAGCAGCTGGACAACCAATT...CTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGAGCCCGAATATTCACTaGCATCGGCTGTTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRSPNIH*HRLFVL Trigger: AAGAACAAACAGCCGATGCCAGTGAATATTCGGGCT...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGAGTTTTAATGCTGCCTaGACAGAGGGTCTATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRSFNAA*TEGLFS Trigger: GGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACT...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | GCAATACCAACATTTCCAATTTACTACCTTCACTATCAACATAGCAAACACACCCGGCCTAACCGTGCCTaGATATTACTCTTACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AIPTFPIYYLHYQHSKHTRPNRA*ILLLPR Trigger: CCTGGGTAAGAGTAATATCCAGGCACGGTTAGGCCG...GGTGTGTTTGCTATGTTGATAGTGAAGGTAGTAAATTGGAAATGTTGGTATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | CATTCCTGTTCAAACAGATATCTGGGTGACTGGATAAACAACAAAACAAACTCACGGCCTAACCGTGCCTaGATATTACTCTTACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSCSNRYLGDWINNKTNSRPNRA*ILLLPR Trigger: CCTGGGTAAGAGTAATATCCAGGCACGGTTAGGCCG...TGAGTTTGTTTTGTTGTTTATCCAGTCACCCAGATATCTGTTTGAACAGGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGATGTATGCATCCAATTaGTTGTCCAGCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRMYASN*LSSCSL Trigger: CAAGGAGCAGCTGGACAACCAATTGGATGCATACAT...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGGTAAATTGGTTGTCCAGCTaGTCCTTGGTCAATACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLNLNLQEGQIKPVKWKVNWLSS*SLVNTG Trigger: CCCTGTATTGACCAAGGAGCAGCTGGACAACCAATT...TACCTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | CACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGAGGAAGCCCGAATATTCACTaGCATCGGCTGTTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HPIVKTLAPSGIIKINRGSPNIH*HRLFVL Trigger: AAGAACAAACAGCCGATGCCAGTGAATATTCGGGCT...TCCTCTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | AAAATATGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGCCAGTCTTCTGTTTCTaGCACTGGCTAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KIWLNLNLQEGQIKPVKWPVFCF*HWLAAA Trigger: AGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGG...CCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCATATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | ATATGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGAGCCTCTCTGGATTATaGGTAGGCCTCTTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IWLNLNLQEGQIKPVKWKSLSGL*VGLFLQ Trigger: TTGGAGGAAGAGGCCTACCCATAATCCAGAGAGGCT...CTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | GCAATACCAACATTTCCAATTTACTACCTTCACTATCAACATAGCAAACACACCCTCTTACCCAGGCGCTaGTTTAAGCTCTTCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AIPTFPIYYLHYQHSKHTLLPRR*FKLFCL Trigger: TAAGCAGAAGAGCTTAAAGCAGCGCCTGGGTAAGAG...GGTGTGTTTGCTATGTTGATAGTGAAGGTAGTAAATTGGAAATGTTGGTATTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | CATTCCTGTTCAAACAGATATCTGGGTGACTGGATAAACAACAAAACAAACTCACTCTTACCCAGGCGCTaGTTTAAGCTCTTCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: HSCSNRYLGDWINNKTNSLLPRR*FKLFCL Trigger: TAAGCAGAAGAGCTTAAAGCAGCGCCTGGGTAAGAG...TGAGTTTGTTTTGTTGTTTATCCAGTCACCCAGATATCTGTTTGAACAGGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTAGTTTTCGACATGTATaGATCCAATTGGTTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTVLLTRPTHSCSNRYLGSFRHV*IQLVVQ Trigger: CTGGACAACCAATTGGATGCATACATGTCGAAAACT...ACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGAGTTTTCGACATGTATaGATCCAATTGGTTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IVTGPSSIDQISSHVFSRSFRHV*IQLVVQ Trigger: CTGGACAACCAATTGGATGCATACATGTCGAAAACT...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCACTATCAACATATGTATGCATCCAATTaGTTGTCCAGCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CGPVAIPTFPIYYLHYQHMYASN*LSSCSL Trigger: CAAGGAGCAGCTGGACAACCAATTGGATGCATACAT...ATGTTGATAGTGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | TTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCAAGTTTTCGACATGTATaGATCCAATTGGTTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPILWPSSNTNISNLLPSSFRHV*IQLVVQ Trigger: CTGGACAACCAATTGGATGCATACATGTCGAAAACT...TGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CCA 90 bp | CATTCCTGTTCAAACAGATATCTGGGTGACTGGATAAACAACAAAACAAACTCAAGCCCGAATATTCACTaGCATCGGCTGTTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSCSNRYLGDWINNKTNSSPNIH*HRLFVL Trigger: AAGAACAAACAGCCGATGCCAGTGAATATTCGGGCT...TGAGTTTGTTTTGTTGTTTATCCAGTCACCCAGATATCTGTTTGAACAGGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CCA 90 bp | AAAATATGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAGTTTTAATGCTGCCTaGACAGAGGGTCTATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KIWLNLNLQEGQIKPVKWSFNAA*TEGLFS Trigger: GGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACT...CCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCATATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR GCA 90 bp | ATATGGTTGAACTTAAACCTTCAAGAGGGTCAAATAAAGCCAGTTAAGTGGAAGAGTTTTCGACATGTATaGATCCAATTGGTTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWLNLNLQEGQIKPVKWKSFRHV*IQLVVQ Trigger: CTGGACAACCAATTGGATGCATACATGTCGAAAACT...CTTCCACTTAACTGGCTTTATTTGACCCTCTTGAAGGTTTAAGTTCAACCATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS CCA 90 bp | AGCCTCTCTGGATTATGGGTAGGCCTCTTCCTCCAATTGCTCCCCTaGCCAGGGCACCTATGGGTCGGCCTAACCGTGCCTGGATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: SLSGLWVGLFLQLLP*PGHLWVGLTVPGYY Trigger: GTAATATCCAGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCAGGGGAGCAATTGGAGGAAGAGGCCTACCCATAATCCAGAGAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS GCA 90 bp | TCCATCTGCTGGGCCAGTCTTCTGTTTCTGGCACTGGCTAGCTGCTaGTGCTGCTGCATCGAAGCCCGAATATTCACTGGCATCGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SICWASLLFLALASC*CCCIEARIFTGIGC Trigger: ACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGGCCCAGCAGATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS GCA 90 bp | TTCTCCATCTGCTGGGCCAGTCTTCTGTTTCTGGCACTGGCTAGCTaGTGCTGCTGCTGCATCGAAGCCCGAATATTCACTGGCATCGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSICWASLLFLALAS*CCCCIEARIFTGIG Trigger: GCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGGCCCAGCAGATGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS GCA 90 bp | ATCTGCTGGGCCAGTCTTCTGTTTCTGGCACTGGCTAGCTGCTGCTaGTGCTGCATCGAAGCCCGAATATTCACTGGCATCGGCTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ICWASLLFLALASCC*CCIEARIFTGIGCL Trigger: CAAACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGGCCCAGCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS CCA 90 bp | GGACAGAGGGTCTATTCTCCATCTGCTGGGCCAGTCTTCTGTTTCTaGCACTGGCTAGCTGCTGCTGCTGCTGCATCGAAGCCCGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: GQRVYSPSAGPVFCF*HWLAAAAAASKPEY Trigger: ATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS CCA 90 bp | ATTGCTCCCCTGGCCAGGGCACCTATGGGTCGGCCTAACCGTGCCTaGATATTACTCTTACCCAGGCGCTGCTTTAAGCTCTTCTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: IAPLARAPMGRPNRA*ILLLPRRCFKLFCL Trigger: TAAGCAGAAGAGCTTAAAGCAGCGCCTGGGTAAGAGTAATATCCAGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCAGGGGAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 |
||
| CDS CCA 90 bp | ATTGCTCCCCTGGCCAGGGCACCTATGGGTCGGCCTAACCGTGCCTaGATATTACTCTTACCCAGGCGCTGCTTTAAGCTCTGCTTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: IAPLARAPMGRPNRA*ILLLPRRCFKLCLS Trigger: ACTTAAGCAGAGCTTAAAGCAGCGCCTGGGTAAGAGTAATATCCAGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCAGGGGAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076639.11 ENSMUST00000107342.2 |
||
| CDS CCA 90 bp | ATTGCTCCCCTGGCCAGGGCACCTATGGGTCGGCCTAACCGTGCCTaGATATTACTCTTACCCAGGCGCTGCTTTAAGCTCTTAGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IAPLARAPMGRPNRA*ILLLPRRCFKLLVA Trigger: TGCAACTAAGAGCTTAAAGCAGCGCCTGGGTAAGAGTAATATCCAGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCAGGGGAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146740.8 |
||
| CDS CCA 90 bp | AGGGTCTATTCTCCATCTGCTGGGCCAGTCTTCTGTTTCTGGCACTaGCTAGCTGCTGCTGCTGCTGCATCGAAGCCCGAATATTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RVYSPSAGPVFCFWH*LAAAAAASKPEYSL Trigger: CAGTGAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS-3UTR CAA 90 bp | AGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCACCTCGGAGCAGGTTTaGACCTCGGAGCGACATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SWYHVLPILWPSSNTNISTSEQV*TSERHP Trigger: GGGATGTCGCTCCGAGGTCAAAACCTGCTCCGAGGT...GGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAACACGTGGTACCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000107344.8 |
||
| CDS GCA 90 bp | TGTCCTTTAGTTTTCGACATGTATGCATCCAATTGGTTGTCCAGCTaGTCCTTGGTCAATACAGGGCGAGTGAGGGCACCTCTCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CPLVFDMYASNWLSS*SLVNTGRVRAPLPR Trigger: CCGAGGGAGAGGTGCCCTCACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAACTAAAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CAA 90 bp | CACTCTTGTCTCTTCTGCCACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGTTGTCCAGCTGCTCCTaGGTCAATACAGGGCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HSCLFCHLCYTNSCFFSVLSSCS*VNTGRV Trigger: CACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAA...CACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTGGCAGAAGAGACAAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CAA 90 bp | GTTAAGTGGAAGGTAACTGCACTTCAGCACGAGCAGCACATGAGCCCTTCCCAGTATGCATCCAATTGGTaGTCCAGCTGCTCCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VKWKVTALQHEQHMSPSQYASNW*SSCSLV Trigger: GACCAAGGAGCAGCTGGACAACCAATTGGATGCATA...CTGGGAAGGGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CAA 90 bp | CGAGCAGCACATGAGCCCTTCCCAGCAGTCAGTTTGTTACCAGTTTCCCACTCTCATGTATGCATCCAATaGGTTGTCCAGCTGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RAAHEPFPAVSLLPVSHSHVCIQ*VVQLLL Trigger: AAGGAGCAGCTGGACAACCAATTGGATGCATACATG...AGAGTGGGAAACTGGTAACAAACTGACTGCTGGGAAGGGCTCATGTGCTGCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTTGGGCATGAGACAGAAAGCCCATGTATGCATCCAATaGGTTGTCCAGCTGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLCERCRSLLGMRQKAHVCIQ*VVQLLL Trigger: AAGGAGCAGCTGGACAACCAATTGGATGCATACATG...GGCTTTCTGTCTCATGCCCAAGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS CCA 90 bp | TCAGCATCCAGGTGTCCTTTAGTTTTCGACATGTATGCATCCAATTaGTTGTCCAGCTGCTCCTTGGTCAATACAGGGCGAGTGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SASRCPLVFDMYASN*LSSCSLVNTGRVRA Trigger: TGCCCTCACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAACTAAAGGACACCTGGATGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CAA 90 bp | TACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCACACCTCGGAGCAGGTTTaGACCTCGGAGCGACATCCC | + |
|
Preference number: 5 (lower is better) Translates to: YPFCGPVAIPTFPIYYLHTSEQV*TSERHP Trigger: GGGATGTCGCTCCGAGGTCAAAACCTGCTCCGAGGT...GTGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000107344.8 |
||
| CDS-3UTR CAA 90 bp | TTCTACTCACAAGGCCAACGCATTCCTGTTCAAACAGATATCTGGGTGACTGGATTGTCCAGCTGCTCCTaGGTCAATACAGGGCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FYSQGQRIPVQTDIWVTGLSSCS*VNTGRV Trigger: CACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAA...TCCAGTCACCCAGATATCTGTTTGAACAGGAATGCGTTGGCCTTGTGAGTAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS GCA 90 bp | GGCATCCAATTCAGCATCCAGGTGTCCTTTAGTTTTCGACATGTATaGATCCAATTGGTTGTCCAGCTGCTCCTTGGTCAATACAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GIQFSIQVSFSFRHV*IQLVVQLLLGQYRA Trigger: CGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAACTAAAGGACACCTGGATGCTGAATTGGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CAA 90 bp | AGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTAGCAATACCAACATTTCCCATGTATGCATCCAATaGGTTGTCCAGCTGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SWYHVLPILWPSSNTNISHVCIQ*VVQLLL Trigger: AAGGAGCAGCTGGACAACCAATTGGATGCATACATG...GGAAATGTTGGTATTGCTACTGGGCCACAGAATGGGTAACACGTGGTACCAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGAGGCTAGAAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAACATGTATGCATCCAATaGGTTGTCCAGCTGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QAEARKLFYSQGQRIPVQHVCIQ*VVQLLL Trigger: AAGGAGCAGCTGGACAACCAATTGGATGCATACATG...TTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTTCTAGCCTCTGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CAA 90 bp | CACTTGTGCTACACCAACAGCTGCTTCTTCTCTGTGAGAGGTGCAGAAGCCTCTACTGGCATCGGCTGTTaGTTCTTCAGCATATTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HLCYTNSCFFSVRGAEASTGIGC*FFSILV Trigger: TACTAATATGCTGAAGAACAAACAGCCGATGCCAGT...AGAGGCTTCTGCACCTCTCACAGAGAAGAAGCAGCTGTTGGTGTAGCACAAGTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049937.13 ENSMUST00000076639.11 |
||
| CDS-3UTR CAA 90 bp | AACTTTGACCAAATCAAAGTTGGTACCACGTGTTACCCATTCTGTGGCCCAGTATATGCATCCAATTGGTaGTCCAGCTGCTCCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NFDQIKVGTTCYPFCGPVYASNW*SSCSLV Trigger: GACCAAGGAGCAGCTGGACAACCAATTGGATGCATA...TACTGGGCCACAGAATGGGTAACACGTGGTACCAACTTTGATTTGGTCAAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS CCA 90 bp | CTTTCCGGACTTGCATATAAAGTCTGCTTAAGTTTTAATGCTGCCTaGACAGAGGGTCTATTCTCCATCTGCTGGGCCAGTCTTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSGLAYKVCLSFNAA*TEGLFSICWASLLF Trigger: AAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAGCAGACTTTATATGCAAGTCCGGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146740.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCACTATCAACATTTGTCCAGCTGCTCCTaGGTCAATACAGGGCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CGPVAIPTFPIYYLHYQHLSSCS*VNTGRV Trigger: CACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAA...ATGTTGATAGTGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGTATGCATCCAATTGGTaGTCCAGCTGCTCCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IVTGPSSIDQISSHVFSRYASNW*SSCSLV Trigger: GACCAAGGAGCAGCTGGACAACCAATTGGATGCATA...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGAGGCTAGAAAACTGTTCTACTCACAAGGCCAACGCATTCCTGTTCAAACTGGCATCGGCTGTTaGTTCTTCAGCATATTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QAEARKLFYSQGQRIPVQTGIGC*FFSILV Trigger: TACTAATATGCTGAAGAACAAACAGCCGATGCCAGT...TTGAACAGGAATGCGTTGGCCTTGTGAGTAGAACAGTTTTCTAGCCTCTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107346.8 |
||
| CDS-3UTR CAA 90 bp | AGACCACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGTATGCATCCAATTGGTaGTCCAGCTGCTCCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPPNSENSSSFWDHKNQQYASNW*SSCSLV Trigger: GACCAAGGAGCAGCTGGACAACCAATTGGATGCATA...CTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTGGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTGACAGGTCCTTCCAGCATCGATCAGATTTCTTCTCATGTTTTCTCAAGGCATGTATGCATCCAATaGGTTGTCCAGCTGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: IVTGPSSIDQISSHVFSRHVCIQ*VVQLLL Trigger: AAGGAGCAGCTGGACAACCAATTGGATGCATACATG...CCTTGAGAAAACATGAGAAGAAATCTGATCGATGCTGGAAGGACCTGTCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGCCCAGTAGCAATACCAACATTTCCAATTTACTACCTTCACTATCAACATTATGCATCCAATTGGTaGTCCAGCTGCTCCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CGPVAIPTFPIYYLHYQHYASNW*SSCSLV Trigger: GACCAAGGAGCAGCTGGACAACCAATTGGATGCATA...ATGTTGATAGTGAAGGTAGTAAATTGGAAATGTTGGTATTGCTACTGGGCCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CAA 90 bp | CACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACAGAGGACATGTATGCATCCAATaGGTTGTCCAGCTGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HPIVKTLAPSGIIKINRGHVCIQ*VVQLLL Trigger: AAGGAGCAGCTGGACAACCAATTGGATGCATACATG...TCCTCTGTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS-3UTR CAA 90 bp | GCAATACCAACATTTCCAATTTACTACCTTCACTATCAACATAGCAAACACACCTATGCATCCAATTGGTaGTCCAGCTGCTCCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AIPTFPIYYLHYQHSKHTYASNW*SSCSLV Trigger: GACCAAGGAGCAGCTGGACAACCAATTGGATGCATA...GGTGTGTTTGCTATGTTGATAGTGAAGGTAGTAAATTGGAAATGTTGGTATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107343.8 ENSMUST00000107344.8 |
||
| CDS-3UTR CAA 90 bp | AAAGACCACCCAATAGTGAAAACTCTAGCTCCTTCTGGGATCATAAAAATCAACACTGGCATCGGCTGTTaGTTCTTCAGCATATTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KDHPIVKTLAPSGIIKINTGIGC*FFSILV Trigger: TACTAATATGCTGAAGAACAAACAGCCGATGCCAGT...GTTGATTTTTATGATCCCAGAAGGAGCTAGAGTTTTCACTATTGGGTGGTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107346.8 |
||
| CDS TCA 72 bp | GGTTGTCCAGCTGCTCCTTGGTCAATACAGGGCGAGTaGGGGCACCTCTCCCTCGGCCACGACCTCGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GCPAAPWSIQGE*GHLSLGHDLGL Trigger: GAGGCCGAGGTCGTGGCCGAGGGAGAGGTGCCCTCACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS CAA 72 bp | TCGGGGAGCTACGGCTCGTCCACCTCGGAGCAGGTTTaGACCTCGGAGCGACATCCCACCCCTAAGCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGSYGSSTSEQV*TSERHPTPKQG Trigger: ACCCTGCTTAGGGGTGGGATGTCGCTCCGAGGTCAAAACCTGCTCCGAGGTGGACGAGCCGTAGCTCCCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000107344.8 ENSMUST00000146740.8 |
||
| CDS CAA 90 bp | CTCGGGGCAAGCCTCTCTGGATTATGGGTAGGCCTCTTCCTCCAATaGCTCCCCTGGCCAGGGCACCTATGGGTCGGCCTAACCGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LGASLSGLWVGLFLQ*LPWPGHLWVGLTVP Trigger: AGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCAGGGGAGCAATTGGAGGAAGAGGCCTACCCATAATCCAGAGAGGCTTGCCCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS CCA 72 bp | GGATTATGGGTAGGCCTCTTCCTCCAATTGCTCCCCTaGCCAGGGCACCTATGGGTCGGCCTAACCGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GLWVGLFLQLLP*PGHLWVGLTVP Trigger: AGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCAGGGGAGCAATTGGAGGAAGAGGCCTACCCATAATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS CCA 72 bp | CGTCCCCCACGTAGTCCTCCTCGGGGCAAGCCTCTCTaGATTATGGGTAGGCCTCTTCCTCCAATTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPPRSPPRGKPL*IMGRPLPPIAP Trigger: GGGAGCAATTGGAGGAAGAGGCCTACCCATAATCCAGAGAGGCTTGCCCCGAGGAGGACTACGTGGGGGACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS CCA 72 bp | TGCATGGCACCGCCCTCTGGACGCCCAGCCACAGCTTaGACATATCCTTCCACAGCCACTTTCCGGACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CMAPPSGRPATA*TYPSTATFRTC Trigger: GCAAGTCCGGAAAGTGGCTGTGGAAGGATATGTCCAAGCTGTGGCTGGGCGTCCAGAGGGCGGTGCCATGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146740.8 |
||
| CDS CAA 72 bp | AGCCTCTCTGGATTATGGGTAGGCCTCTTCCTCCAATaGCTCCCCTGGCCAGGGCACCTATGGGTCGGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: SLSGLWVGLFLQ*LPWPGHLWVGL Trigger: TAGGCCGACCCATAGGTGCCCTGGCCAGGGGAGCAATTGGAGGAAGAGGCCTACCCATAATCCAGAGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS CAA 72 bp | TTGCATGGCACCGCCCTCTGGACGCCCAGCCACAGCTaGGACATATCCTTCCACAGCCACTTTCCGGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: LHGTALWTPSHS*DISFHSHFPDL Trigger: CAAGTCCGGAAAGTGGCTGTGGAAGGATATGTCCAAGCTGTGGCTGGGCGTCCAGAGGGCGGTGCCATGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146740.8 |
||
| CDS CCA 72 bp | TCTCCATCTGCTGGGCCAGTCTTCTGTTTCTGGCACTaGCTAGCTGCTGCTGCTGCTGCATCGAAGCCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: SPSAGPVFCFWH*LAAAAAASKPE Trigger: TTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGGCCCAGCAGATGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS CCA 72 bp | CTGGCCAGGGCACCTATGGGTCGGCCTAACCGTGCCTaGATATTACTCTTACCCAGGCGCTGCTTTAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LARAPMGRPNRA*ILLLPRRCFKL Trigger: GAGCTTAAAGCAGCGCCTGGGTAAGAGTAATATCCAGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS GCA 72 bp | TGGGCCAGTCTTCTGTTTCTGGCACTGGCTAGCTGCTaGTGCTGCTGCATCGAAGCCCGAATATTCACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: WASLLFLALASC*CCCIEARIFTG Trigger: GCCAGTGAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS GCA 72 bp | GCCAGTCTTCTGTTTCTGGCACTGGCTAGCTGCTGCTaGTGCTGCATCGAAGCCCGAATATTCACTGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: ASLLFLALASCC*CCIEARIFTGI Trigger: GATGCCAGTGAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS GCA 72 bp | CCTAACCGTGCCTGGATATTACTCTTACCCAGGCGCTaGTTTAAGCTCTTAGTTGCATGGCACCGCCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PNRAWILLLPRR*FKLLVAWHRPL Trigger: CAGAGGGCGGTGCCATGCAACTAAGAGCTTAAAGCAGCGCCTGGGTAAGAGTAATATCCAGGCACGGTTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146740.8 |
||
| CDS CAA 72 bp | GACATGTATGCATCCAATTGGTTGTCCAGCTGCTCCTaGGTCAATACAGGGCGAGTGAGGGCACCTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: DMYASNWLSSCS*VNTGRVRAPLP Trigger: AGGGAGAGGTGCCCTCACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS CAA 90 bp | TTAGTTTTCGACATGTATGCATCCAATTGGTTGTCCAGCTGCTCCTaGGTCAATACAGGGCGAGTGAGGGCACCTCTCCCTCGGCCACGA | + |
|
Preference number: 6 (lower is better) Translates to: LVFDMYASNWLSSCS*VNTGRVRAPLPRPR Trigger: TCGTGGCCGAGGGAGAGGTGCCCTCACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS GCA 72 bp | TTTAATGCTGCCTGGACAGAGGGTCTATTCTCCATCTaGTGGGCCAGTCTTCTGTTTCTGGCACTGGCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: FNAAWTEGLFSI*WASLLFLALAS Trigger: GCTAGCCAGTGCCAGAAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS CAA 90 bp | GCATCCAGGTGTCCTTTAGTTTTCGACATGTATGCATCCAATTGGTaGTCCAGCTGCTCCTTGGTCAATACAGGGCGAGTGAGGGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: ASRCPLVFDMYASNW*SSCSLVNTGRVRAP Trigger: AGGTGCCCTCACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAACTAAAGGACACCTGGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS GCA 72 bp | GTTTTCGACATGTATGCATCCAATTGGTTGTCCAGCTaGTCCTTGGTCAATACAGGGCGAGTGAGGGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: VFDMYASNWLSS*SLVNTGRVRAP Trigger: AGGTGCCCTCACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS CAA 90 bp | TTCAGCATCCAGGTGTCCTTTAGTTTTCGACATGTATGCATCCAATaGGTTGTCCAGCTGCTCCTTGGTCAATACAGGGCGAGTGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FSIQVSFSFRHVCIQ*VVQLLLGQYRASEG Trigger: GCCCTCACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAACTAAAGGACACCTGGATGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS CCA 72 bp | CGCTGCTTTAAGCTCTGCTTAAGTTTTAATGCTGCCTaGACAGAGGGTCTATTCTCCATCTGCTGGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RCFKLCLSFNAA*TEGLFSICWAS Trigger: ACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAGCAGAGCTTAAAGCAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076639.11 ENSMUST00000107342.2 |
||
| CDS CAA 72 bp | CAGGTGTCCTTTAGTTTTCGACATGTATGCATCCAATaGGTTGTCCAGCTGCTCCTTGGTCAATACAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: QVSFSFRHVCIQ*VVQLLLGQYRA Trigger: CGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAACTAAAGGACACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS CCA 72 bp | TGCTTTAAGCTCTTCTGCTTAAGTTTTAATGCTGCCTaGACAGAGGGTCTATTCTCCATCTGCTGGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CFKLFCLSFNAA*TEGLFSICWAS Trigger: ACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAGCAGAAGAGCTTAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 ENSMUST00000131868.2 |
||
| CDS CCA 72 bp | AGGTGTCCTTTAGTTTTCGACATGTATGCATCCAATTaGTTGTCCAGCTGCTCCTTGGTCAATACAGGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RCPLVFDMYASN*LSSCSLVNTGR Trigger: TCGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAACTAAAGGACACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS CCA 72 bp | CTGCTGCTGCTGCTGCATCGAAGCCCGAATATTCACTaGCATCGGCTGTTTGTTCTTCAGCATATTAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLHRSPNIH*HRLFVLQHISK Trigger: TTTACTAATATGCTGAAGAACAAACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAGCAGCAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS CAA 72 bp | TGTCCTTTAGTTTTCGACATGTATGCATCCAATTGGTaGTCCAGCTGCTCCTTGGTCAATACAGGGCGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CPLVFDMYASNW*SSCSLVNTGRV Trigger: CACTCGCCCTGTATTGACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAACTAAAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000001043.14 ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107342.2 ENSMUST00000107343.8 ENSMUST00000107344.8 ENSMUST00000107346.8 |
||
| CDS CAA 90 bp | TGCTGCTGCTGCATCGAAGCCCGAATATTCACTGGCATCGGCTGTTaGTTCTTCAGCATATTAGTAAAGCGCTCATTTAGAGACATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CCCCIEARIFTGIGC*FFSILVKRSFRDIL Trigger: CAAGATGTCTCTAAATGAGCGCTTTACTAATATGCTGAAGAACAAACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAGCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||
| CDS CCA 72 bp | CTTGCATATAAAGTCTGCTTAAGTTTTAATGCTGCCTaGACAGAGGGTCTATTCTCCATCTGCTGGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LAYKVCLSFNAA*TEGLFSICWAS Trigger: ACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAGCAGACTTTATATGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146740.8 |
||
| CDS CAA 72 bp | TGCATCGAAGCCCGAATATTCACTGGCATCGGCTGTTaGTTCTTCAGCATATTAGTAAAGCGCTCATTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: CIEARIFTGIGC*FFSILVKRSFR Trigger: TCTAAATGAGCGCTTTACTAATATGCTGAAGAACAAACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049937.13 ENSMUST00000076639.11 ENSMUST00000107346.8 ENSMUST00000131868.2 ENSMUST00000146740.8 |
||