Pregenerated sensors for CHST8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060402Ensembl transcript IDs: ENSMUST00000078686.8, ENSMUST00000154629.3, ENSMUST00000205259.2, ENSMUST00000238947.2
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGCCTGCGCTGCCGGAGGCGCAAAGGAGATCCCGCTGCCTTCGGGTaGGGTCGAGGTTGGTCAGGCGCTTGCAGCTGGAGGCCTCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: RLRCRRRKGDPAAFG*GRGWSGACSWRPLG Trigger: GCCAAGAGGCCTCCAGCTGCAAGCGCCTGACCAACCTCGACCTCACCCGAAGGCAGCGGGATCTCCTTTGCGCCTCCGGCAGCGCAGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR GCA 90 bp | GAGCAGTCTCCGCCTGCGCTGCCGGAGGCGCAAAGGAGATCCCGCTaGCTTCGGGTGAGGTCGAGGTTGGTCAGGCGCTTGCAGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: EQSPPALPEAQRRSR*LRVRSRLVRRLQLE Trigger: CTCCAGCTGCAAGCGCCTGACCAACCTCGACCTCACCCGAAGGCAGCGGGATCTCCTTTGCGCCTCCGGCAGCGCAGGCGGAGACTGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR GCA 90 bp | GTACTGGACGAACTCGGGGAACTGCACACCGGAGCCAGTCCGCAGTaGCTCCCGCGAGGCGTTGGCGCGGTACCGGGCCAGGATAGCCTT | + |
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Preference number: 1 (lower is better) Translates to: VLDELGELHTGASPQ*LPRGVGAVPGQDSL Trigger: AAGGCTATCCTGGCCCGGTACCGCGCCAACGCCTCGCGGGAGGCACTGCGGACTGGCTCCGGTGTGCAGTTCCCCGAGTTCGTCCAGTAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR GCA 90 bp | GCGCAGGCTTCTCGCATCACACGCTTGCGCTCCTGTTGGGTCTGGTaGAGGCTGACCCAACGACTGTCCATGGTGCGGGGTCTCGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: AQASRITRLRSCWVW*RLTQRLSMVRGLGW Trigger: CCAGCCGAGACCCCGCACCATGGACAGTCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGTGTGATGCGAGAAGCCTGCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CCA 90 bp | CAGTGGATGTCCATGCCCACGGGCCGGTGGACATCCAACAGGTACTaGACGAACTCGGGGAACTGCACACCGGAGCCAGTCCGCAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: QWMSMPTGRWTSNRY*TNSGNCTPEPVRSA Trigger: GGCACTGCGGACTGGCTCCGGTGTGCAGTTCCCCGAGTTCGTCCAGTACCTGTTGGATGTCCACCGGCCCGTGGGCATGGACATCCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CCA 90 bp | TTAGCGCAGGCTTCTCGCATCACACGCTTGCGCTCCTGTTGGGTCTaGTGCAGGCTGACCCAACGACTGTCCATGGTGCGGGGTCTCGGC | + |
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Preference number: 1 (lower is better) Translates to: LAQASRITRLRSCWV*CRLTQRLSMVRGLG Trigger: GCCGAGACCCCGCACCATGGACAGTCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGTGTGATGCGAGAAGCCTGCGCTAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CCA 90 bp | AGCCGGCTAACATGGTCCCAGTGGATGTCCATGCCCACGGGCCGGTaGACATCCAACAGGTACTGGACGAACTCGGGGAACTGCACACCG | + |
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Preference number: 1 (lower is better) Translates to: SRLTWSQWMSMPTGR*TSNRYWTNSGNCTP Trigger: CGGTGTGCAGTTCCCCGAGTTCGTCCAGTACCTGTTGGATGTCCACCGGCCCGTGGGCATGGACATCCACTGGGACCATGTTAGCCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CCA 90 bp | CCCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTaGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCAC | + |
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Preference number: 1 (lower is better) Translates to: PNEEMGVGQGSRSIV*ASVAHPRATATRPH Trigger: GTGAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR CCA 90 bp | GAGGTTGGTCAGGCGCTTGCAGCTGGAGGCCTCTTGGCGACCCGCTaGGTGAATCTCGTGTGCCCTTTTCTGTGGATATCCTCAAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: EVGQALAAGGLLATR*VNLVCPFLWISSSG Trigger: GCCACTTGAGGATATCCACAGAAAAGGGCACACGAGATTCACCCAGCGGGTCGCCAAGAGGCCTCCAGCTGCAAGCGCCTGACCAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CCA 90 bp | CTGTATTTAGCGCAGGCTTCTCGCATCACACGCTTGCGCTCCTGTTaGGTCTGGTGCAGGCTGACCCAACGACTGTCCATGGTGCGGGGT | + |
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Preference number: 1 (lower is better) Translates to: LYLAQASRITRLRSC*VWCRLTQRLSMVRG Trigger: ACCCCGCACCATGGACAGTCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGTGTGATGCGAGAAGCCTGCGCTAAATACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CCA 90 bp | TGGTGCAGGCTGACCCAACGACTGTCCATGGTGCGGGGTCTCGGCTaGATAAAGGTTTCGGACGAGTTGTTGCCTTGGTTAGTCCCTGCG | + |
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Preference number: 1 (lower is better) Translates to: WCRLTQRLSMVRGLG*IKVSDELLPWLVPA Trigger: CGCAGGGACTAACCAAGGCAACAACTCGTCCGAAACCTTTATCCAGCCGAGACCCCGCACCATGGACAGTCGTTGGGTCAGCCTGCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR TCA 90 bp | TTGGTCAGGCGCTTGCAGCTGGAGGCCTCTTGGCGACCCGCTGGGTaGATCTCGTGTGCCCTTTTCTGTGGATATCCTCAAGTGGCTATC | + |
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Preference number: 1 (lower is better) Translates to: LVRRLQLEASWRPAG*ISCALFCGYPQVAI Trigger: GATAGCCACTTGAGGATATCCACAGAAAAGGGCACACGAGATTCACCCAGCGGGTCGCCAAGAGGCCTCCAGCTGCAAGCGCCTGACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR GCA 90 bp | CGGCTGGATAAAGGTTTCGGACGAGTTGTTGCCTTGGTTAGTCCCTaGGGCTGGCATCTTTTTGATGAGCAGTCTCCGCCTGCGCTGCCG | + |
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Preference number: 1 (lower is better) Translates to: RLDKGFGRVVALVSP*GWHLFDEQSPPALP Trigger: CGGCAGCGCAGGCGGAGACTGCTCATCAAAAAGATGCCAGCCGCAGGGACTAACCAAGGCAACAACTCGTCCGAAACCTTTATCCAGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CCA 90 bp | TCGTGCTCCGTCTCAAACTCAGCCAACCCAATGAGGAAATGGGTGTaGGACAAGGGTCAAGGTCCATTGTCTGGGCCTCTGTGGCCCACC | + |
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Preference number: 1 (lower is better) Translates to: SCSVSNSANPMRKWV*DKGQGPLSGPLWPT Trigger: GGTGGGCCACAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTGGCTGAGTTTGAGACGGAGCACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR CCA 90 bp | GATAAAGGTTTCGGACGAGTTGTTGCCTTGGTTAGTCCCTGCGGCTaGCATCTTTTTGATGAGCAGTCTCCGCCTGCGCTGCCGGAGGCG | + |
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Preference number: 1 (lower is better) Translates to: DKGFGRVVALVSPCG*HLFDEQSPPALPEA Trigger: CGCCTCCGGCAGCGCAGGCGGAGACTGCTCATCAAAAAGATGCCAGCCGCAGGGACTAACCAAGGCAACAACTCGTCCGAAACCTTTATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CCA 90 bp | GAGTGCCTGTCCTTGAACCTCGGGAAAGTCAGGTTCCCGGGCGCATaGATGAGACGCAGGAAGAAGTTGGCATCGTCTTCCATGCTCTCG | + |
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Preference number: 1 (lower is better) Translates to: ECLSLNLGKVRFPGA*MRRRKKLASSSMLS Trigger: CGAGAGCATGGAAGACGATGCCAACTTCTTCCTGCGTCTCATCCATGCGCCCGGGAACCTGACTTTCCCGAGGTTCAAGGACAGGCACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CCA 90 bp | TCCGAGTCGTGCTCCGTCTCAAACTCAGCCAACCCAATGAGGAAATaGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGCCTCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: SESCSVSNSANPMRK*VWDKGQGPLSGPLW Trigger: CCACAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTGGCTGAGTTTGAGACGGAGCACGACTCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR CCA 90 bp | GTGCGGGGTCTCGGCTGGATAAAGGTTTCGGACGAGTTGTTGCCTTaGTTAGTCCCTGCGGCTGGCATCTTTTTGATGAGCAGTCTCCGC | + |
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Preference number: 1 (lower is better) Translates to: VRGLGWIKVSDELLP*LVPAAGIFLMSSLR Trigger: GCGGAGACTGCTCATCAAAAAGATGCCAGCCGCAGGGACTAACCAAGGCAACAACTCGTCCGAAACCTTTATCCAGCCGAGACCCCGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR TCA 90 bp | AGCATCCATCCGAGTCGTGCTCCGTCTCAAACTCAGCCAACCCAATaGGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: SIHPSRAPSQTQPTQ*GNGCGTRVKVHCLG Trigger: GCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTGGCTGAGTTTGAGACGGAGCACGACTCGGATGGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR TCA 90 bp | GCAGGCCCCGCCCTCAGTACAGGTCCGAGAAAGGTTTGGAGTAGTTaGACATCAGGTAATCCATGTAGTAGAAGTCGTAGGTTCGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: AGPALSTGPRKVWSS*TSGNPCSRSRRFAV Trigger: GACAGCGAACCTACGACTTCTACTACATGGATTACCTGATGTTCAACTACTCCAAACCTTTCTCGGACCTGTACTGAGGGCGGGGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR GCA 90 bp | GCTCAGCATAGCTCAGCTGAGTTCTTAAAGCATCCATCCGAGTCGTaGTCCGTCTCAAACTCAGCCAACCCAATGAGGAAATGGGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: AQHSSAEFLKHPSES*SVSNSANPMRKWVW Trigger: CCACACCCATTTCCTCATTGGGTTGGCTGAGTTTGAGACGGAGCACGACTCGGATGGATGCTTTAAGAACTCAGCTGAGCTATGCTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR-3UTR CCA 90 bp | ACACCGGAGCCAGTCCGCAGTGCCTCCCGCGAGGCGTTGGCGCGGTACCGGGCCCGCTCCTGTTGGGTCTaGTGCAGGCTGACCCAACGA | + |
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Preference number: 2 (lower is better) Translates to: TPEPVRSASREALARYRARSCWV*CRLTQR Trigger: TCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCG...GGCCCGGTACCGCGCCAACGCCTCGCGGGAGGCACTGCGGACTGGCTCCGGTGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CAA 90 bp | CCGGAGGCGCAAAGGAGATCCCGCTGCCTTCGGGTGAGGTCGAGGTaGGTCAGGCGCTTGCAGCTGGAGGCCTCTTGGCGACCCGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PEAQRRSRCLRVRSR*VRRLQLEASWRPAG Trigger: CCCAGCGGGTCGCCAAGAGGCCTCCAGCTGCAAGCGCCTGACCAACCTCGACCTCACCCGAAGGCAGCGGGATCTCCTTTGCGCCTCCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCTGGTGCAGGCTGACCCAACGACTGTCCATGGTGCGGGGTCTCGGCTGGGCAGGTGAGTGGGCATaGCCGGCAGACCCCGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: WVWCRLTQRLSMVRGLGWAGEWA*PADPAP Trigger: AGGGGCGGGGTCTGCCGGTCATGCCCACTCACCTGC...CCAGCCGAGACCCCGCACCATGGACAGTCGTTGGGTCAGCCTGCACCAGACCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR-3UTR TCA 90 bp | GTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCGCAGGTGAGTGGGCATaGCCGGCAGACCCCGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: VAHPRATATRPHILRAQSAGEWA*PADPAP Trigger: AGGGGCGGGGTCTGCCGGTCATGCCCACTCACCTGC...GGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCTGGTGCAGGCTGACCCAACGACTGTCCATGGTGCGGGGTCTCGGCTGGTCAAGGTCCATTGTCTaGGCCTCTGTGGCCCACCCT | + |
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Preference number: 2 (lower is better) Translates to: WVWCRLTQRLSMVRGLGWSRSIV*ASVAHP Trigger: AGGGTGGGCCACAGAGGCCCAGACAATGGACCTTGA...CCAGCCGAGACCCCGCACCATGGACAGTCGTTGGGTCAGCCTGCACCAGACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CAA 90 bp | TGGGTGATTCTCGATGTGGTCCGCGCCTCCTCGGAGTGCCTGTCCTaGAACCTCGGGAAAGTCAGGTTCCCGGGCGCATGGATGAGACGC | + |
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Preference number: 2 (lower is better) Translates to: WVILDVVRASSECLS*NLGKVRFPGAWMRR Trigger: GCGTCTCATCCATGCGCCCGGGAACCTGACTTTCCCGAGGTTCAAGGACAGGCACTCCGAGGAGGCGCGGACCACATCGAGAATCACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CAA 90 bp | GCCAACCCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATaGTCTGGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAAGGC | + |
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Preference number: 2 (lower is better) Translates to: ANPMRKWVWDKGQGP*SGPLWPTLGPQPQG Trigger: GCCTTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR CAA 90 bp | TCGGGTGAGGTCGAGGTTGGTCAGGCGCTTGCAGCTGGAGGCCTCTaGGCGACCCGCTGGGTGAATCTCGTGTGCCCTTTTCTGTGGATA | + |
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Preference number: 2 (lower is better) Translates to: SGEVEVGQALAAGGL*ATRWVNLVCPFLWI Trigger: TATCCACAGAAAAGGGCACACGAGATTCACCCAGCGGGTCGCCAAGAGGCCTCCAGCTGCAAGCGCCTGACCAACCTCGACCTCACCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CAA 90 bp | CCTGTATTTAGCGCAGGCTTCTCGCATCACACGCTTGCGCTCCTGTaGGGTCTGGTGCAGGCTGACCCAACGACTGTCCATGGTGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: PVFSAGFSHHTLALL*GLVQADPTTVHGAG Trigger: CCCCGCACCATGGACAGTCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGTGTGATGCGAGAAGCCTGCGCTAAATACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CAA 90 bp | CTGCTGCTGGCCCTGTATTTAGCGCAGGCTTCTCGCATCACACGCTaGCGCTCCTGTTGGGTCTGGTGCAGGCTGACCCAACGACTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LLLALYLAQASRITR*RSCWVWCRLTQRLS Trigger: GGACAGTCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGTGTGATGCGAGAAGCCTGCGCTAAATACAGGGCCAGCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR-3UTR TCA 90 bp | GGTCAAGGTCCATTGTCTGGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAACTCCTACAGGGAGGTTaGCAGCTGCCTGTCACTCCA | + |
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Preference number: 2 (lower is better) Translates to: GQGPLSGPLWPTLGPQPQLLQGG*QLPVTP Trigger: TGGAGTGACAGGCAGCTGTCAACCTCCCTGTAGGAG...TTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACCTTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCGCACTGCTAGTGGCCTaGAAGCAGCAGGCACAGATT | + |
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Preference number: 2 (lower is better) Translates to: VAHPRATATRPHILRAQSALLVA*KQQAQI Trigger: AATCTGTGCCTGCTGCTTGCAGGCCACTAGCAGTGC...GGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR-3UTR TCA 90 bp | TCAAACTCAGCCAACCCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCAGCAGGTGAGTGGGCATaGCCGGCAGACCCCGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SNSANPMRKWVWDKGQGPAGEWA*PADPAP Trigger: AGGGGCGGGGTCTGCCGGTCATGCCCACTCACCTGC...TGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTGGCTGAGTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR-3UTR CCA 90 bp | GATTCTCGATGTGGTCCGCGCCTCCTCGGAGTGCCTGTCCTTGAACCTCGGGAACAGTACAGTACACGGTaGCGGTCCTCCACGAAGATG | + |
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Preference number: 2 (lower is better) Translates to: DSRCGPRLLGVPVLEPREQYSTR*RSSTKM Trigger: CATCTTCGTGGAGGACCGCCACCGTGTACTGTACTG...TTCCCGAGGTTCAAGGACAGGCACTCCGAGGAGGCGCGGACCACATCGAGAATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR-3UTR CCA 90 bp | CACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGAAGCAGCAAACCACGTaGTTTGGTACAAGGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: HPRATATRPHILRAQSPEKQQTT*FGTRQR Trigger: CCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTT...CTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCAAGGTCCATTGTCTGGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAATGGACGGTGTTGTGTTaGATATCTGCCGTGGATGAG | + |
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Preference number: 2 (lower is better) Translates to: GQGPLSGPLWPTLGPQPQWTVLC*ISAVDE Trigger: CTCATCCACGGCAGATATCCAACACAACACCGTCCA...TTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACCTTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CAA 90 bp | GGTGCGGGGTCTCGGCTGGATAAAGGTTTCGGACGAGTTGTTGCCTaGGTTAGTCCCTGCGGCTGGCATCTTTTTGATGAGCAGTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: GAGSRLDKGFGRVVA*VSPCGWHLFDEQSP Trigger: CGGAGACTGCTCATCAAAAAGATGCCAGCCGCAGGGACTAACCAAGGCAACAACTCGTCCGAAACCTTTATCCAGCCGAGACCCCGCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGCCTATGAGCTCACAGCACAGCCTGGAGTAGACACCACTGCTCTGAAAACCTCAAGGTCCATTGTCTaGGCCTCTGTGGCCCACCCT | + |
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Preference number: 2 (lower is better) Translates to: GAYELTAQPGVDTTALKTSRSIV*ASVAHP Trigger: AGGGTGGGCCACAGAGGCCCAGACAATGGACCTTGA...GGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTGTGCTGTGAGCTCATAGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGAAAACCATGTGCTTTATTCAGATGACCCTGGGTCATAGAAAAGCAGCAGCAGGTGAGTGGGCATaGCCGGCAGACCCCGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: ALKTMCFIQMTLGHRKAAAGEWA*PADPAP Trigger: AGGGGCGGGGTCTGCCGGTCATGCCCACTCACCTGC...TGCTGCTTTTCTATGACCCAGGGTCATCTGAATAAAGCACATGGTTTTCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR-3UTR GCA 90 bp | CACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCTCTGAAAACCATGTaGTTTATTCAGATGACCCTG | + |
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Preference number: 2 (lower is better) Translates to: HPRATATRPHILRAQSPEALKTM*FIQMTL Trigger: CAGGGTCATCTGAATAAAGCACATGGTTTTCAGAGC...CTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGAGTATGGCAGAAATGTaGGACCTGAACGGCAAATAT | + |
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Preference number: 2 (lower is better) Translates to: HPRATATRPHILRAQSPESMAEM*DLNGKY Trigger: ATATTTGCCGTTCAGGTCCCACATTTCTGCCATACT...CTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR CAA 90 bp | TCCATGGTGCGGGGTCTCGGCTGGATAAAGGTTTCGGACGAGTTGTaGCCTTGGTTAGTCCCTGCGGCTGGCATCTTTTTGATGAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SMVRGLGWIKVSDEL*PWLVPAAGIFLMSS Trigger: ACTGCTCATCAAAAAGATGCCAGCCGCAGGGACTAACCAAGGCAACAACTCGTCCGAAACCTTTATCCAGCCGAGACCCCGCACCATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTGGAGTAGACACCACTGCTCTGAAAACCATGTGCTTTATTCAGATGACCGACATCCCTCGACGCTaGGGCCCTCTTCTGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: QPGVDTTALKTMCFIQMTDIPRR*GPLLGL Trigger: GAGACCCAGAAGAGGGCCCCAGCGTCGAGGGATGTC...GGTCATCTGAATAAAGCACATGGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGGATAAGAGGGCAGGGTGCCTATaGGCTCACAGCACAGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LGHRKAANHVVWYKAKDKRAGCL*AHSTAW Trigger: CCAGGCTGTGCTGTGAGCTCATAGGCACCCTGCCCT...CTTATCCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGCCTATGAGCTCACAGCACAGCCTGGAGTAGACACCACTGCTCTGAAAACCAAGCAGCAAACCACGTaGTTTGGTACAAGGCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GAYELTAQPGVDTTALKTKQQTT*FGTRQR Trigger: CCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTT...GGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTGTGCTGTGAGCTCATAGGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTGTTGCCTTGGTTAGTCCCTGCGGCTGGCATCTTTTTGATGAGCAGTCTCCGTGGGTGAATCTCGTGTaGCCTTTTCTGTGGATATCC | + |
|
Preference number: 2 (lower is better) Translates to: VVALVSPCGWHLFDEQSPWVNLV*PFLWIS Trigger: GGATATCCACAGAAAAGGGCACACGAGATTCACCCA...CGGAGACTGCTCATCAAAAAGATGCCAGCCGCAGGGACTAACCAAGGCAACAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR-3UTR CCA 90 bp | GTACAGGTCCGAGAAAGGTTTGGAGTAGTTGAACATCAGGTAATCCATGTAGTACGCTTGCGCTCCTGTTaGGTCTGGTGCAGGCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: VQVRERFGVVEHQVIHVVRLRSC*VWCRLT Trigger: GGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCG...TACTACATGGATTACCTGATGTTCAACTACTCCAAACCTTTCTCGGACCTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGGATAAGAGGGAGGTTGACAGCTaGCTGTCACTCCAGCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LGHRKAANHVVWYKAKDKREVDS*LSLQLW Trigger: CCAAAGCTGGAGTGACAGGCAGCTGTCAACCTCCCT...CTTATCCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGATGAGGAAATGGGTGTaGGACAAGGGTCAAGGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: MTLGHRKAANHVVWYKAKMRKWV*DKGQGP Trigger: TGGACCTTGACCCTTGTCCCACACCCATTTCCTCAT...CTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGGATAAGATGAGGAAATGGGTGTaGGACAAGGGTCAAGGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LGHRKAANHVVWYKAKDKMRKWV*DKGQGP Trigger: TGGACCTTGACCCTTGTCCCACACCCATTTCCTCAT...CTTATCCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTGAAAACCATGTGCTTTATTCAGATGACCCTGGGTCATAGAAAAGCAGCAATGAGGAAATGGGTGTaGGACAAGGGTCAAGGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: ALKTMCFIQMTLGHRKAAMRKWV*DKGQGP Trigger: TGGACCTTGACCCTTGTCCCACACCCATTTCCTCAT...TGCTGCTTTTCTATGACCCAGGGTCATCTGAATAAAGCACATGGTTTTCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGGATAAGGCAAACCACGTGGTTTaGTACAAGGCAAAGGATAAG | + |
|
Preference number: 2 (lower is better) Translates to: LGHRKAANHVVWYKAKDKANHVV*YKAKDK Trigger: CTTATCCTTTGCCTTGTACCAAACCACGTGGTTTGC...CTTATCCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGACACCTGCACTCATGTaGACATATTCACGTATTATT | + |
|
Preference number: 2 (lower is better) Translates to: MTLGHRKAANHVVWYKAKTPALM*TYSRII Trigger: AATAATACGTGAATATGTGCACATGAGTGCAGGTGT...CTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR-3UTR CCA 90 bp | TACAGCCTTCACAGACACCTGCACTCATGTGCACATATTCACGTATTATTAATAAAGCAGCAAACCACGTaGTTTGGTACAAGGCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: YSLHRHLHSCAHIHVLLIKQQTT*FGTRQR Trigger: CCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTT...TATTAATAATACGTGAATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR GCA 72 bp | GAACTCGGGGAACTGCACACCGGAGCCAGTCCGCAGTaGCTCCCGCGAGGCGTTGGCGCGGTACCGGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ELGELHTGASPQ*LPRGVGAVPGQ Trigger: CTGGCCCGGTACCGCGCCAACGCCTCGCGGGAGGCACTGCGGACTGGCTCCGGTGTGCAGTTCCCCGAGTTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR-3UTR CAA 90 bp | ACACCGGAGCCAGTCCGCAGTGCCTCCCGCGAGGCGTTGGCGCGGTACCGGGCCGCGGCTGGCATCTTTTaGATGAGCAGTCTCCGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TPEPVRSASREALARYRAAAGIF*MSSLRL Trigger: CAGGCGGAGACTGCTCATCAAAAAGATGCCAGCCGC...GGCCCGGTACCGCGCCAACGCCTCGCGGGAGGCACTGCGGACTGGCTCCGGTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR GCA 72 bp | CCGCCTGCGCTGCCGGAGGCGCAAAGGAGATCCCGCTaGCTTCGGGTGAGGTCGAGGTTGGTCAGGCGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PPALPEAQRRSR*LRVRSRLVRRL Trigger: CAAGCGCCTGACCAACCTCGACCTCACCCGAAGGCAGCGGGATCTCCTTTGCGCCTCCGGCAGCGCAGGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR CCA 72 bp | AGGCAGGGGCTGCACAGCCGGCTAACATGGTCCCAGTaGATGTCCATGCCCACGGGCCGGTGGACATCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RQGLHSRLTWSQ*MSMPTGRWTSN Trigger: GTTGGATGTCCACCGGCCCGTGGGCATGGACATCCACTGGGACCATGTTAGCCGGCTGTGCAGCCCCTGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR TCA 72 bp | TCACACGCTTGCGCTCCTGTTGGGTCTGGTGCAGGCTaGCCCAACGACTGTCCATGGTGCGGGGTCTCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SHACAPVGSGAG*PNDCPWCGVSA Trigger: AGCCGAGACCCCGCACCATGGACAGTCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGTGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR TCA 72 bp | TCGATGTGGTCCGCGCCTCCTCGGAGTGCCTGTCCTTaGACCTCGGGAAAGTCAGGTTCCCGGGCGCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: SMWSAPPRSACP*TSGKSGSRAHG Trigger: TCCATGCGCCCGGGAACCTGACTTTCCCGAGGTTCAAGGACAGGCACTCCGAGGAGGCGCGGACCACATCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR GCA 72 bp | GCTGGCATCTTTTTGATGAGCAGTCTCCGCCTGCGCTaGCGGAGGCGCAAAGGAGATCCCGCTGCCTTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: AGIFLMSSLRLR*RRRKGDPAAFG Trigger: CCCGAAGGCAGCGGGATCTCCTTTGCGCCTCCGGCAGCGCAGGCGGAGACTGCTCATCAAAAAGATGCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR GCA 72 bp | TGGACATCCAACAGGTACTGGACGAACTCGGGGAACTaGACACCGGAGCCAGTCCGCAGTGCCTCCCGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: WTSNRYWTNSGN*TPEPVRSASRE Trigger: CTCGCGGGAGGCACTGCGGACTGGCTCCGGTGTGCAGTTCCCCGAGTTCGTCCAGTACCTGTTGGATGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR CCA 72 bp | TCCATGCCCACGGGCCGGTGGACATCCAACAGGTACTaGACGAACTCGGGGAACTGCACACCGGAGCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SMPTGRWTSNRY*TNSGNCTPEPV Trigger: GACTGGCTCCGGTGTGCAGTTCCCCGAGTTCGTCCAGTACCTGTTGGATGTCCACCGGCCCGTGGGCATGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR-3UTR CAA 90 bp | GATTCTCGATGTGGTCCGCGCCTCCTCGGAGTGCCTGTCCTTGAACCTCGGGAAAGGTTGGTCAGGCGCTaGCAGCTGGAGGCCTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: DSRCGPRLLGVPVLEPRERLVRR*QLEASW Trigger: CCAAGAGGCCTCCAGCTGCAAGCGCCTGACCAACCT...TTCCCGAGGTTCAAGGACAGGCACTCCGAGGAGGCGCGGACCACATCGAGAATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR TCA 72 bp | GCTGCAGCGAGGAGAGCTGAGCGAAGTACTGATGGGTaGTTCTCGATGTGGTCCGCGCCTCCTCGGAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: AAARRAERSTDG*FSMWSAPPRSA Trigger: GGCACTCCGAGGAGGCGCGGACCACATCGAGAATCACCCATCAGTACTTCGCTCAGCTCTCCTCGCTGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR GCA 72 bp | TCTCGCATCACACGCTTGCGCTCCTGTTGGGTCTGGTaGAGGCTGACCCAACGACTGTCCATGGTGCGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SRITRLRSCWVW*RLTQRLSMVRG Trigger: ACCCCGCACCATGGACAGTCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGTGTGATGCGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR CCA 72 bp | GCTTCTCGCATCACACGCTTGCGCTCCTGTTGGGTCTaGTGCAGGCTGACCCAACGACTGTCCATGGTGCGG | + |
|
Preference number: 3 (lower is better) Translates to: ASRITRLRSCWV*CRLTQRLSMVR Trigger: CCGCACCATGGACAGTCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGTGTGATGCGAGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR CCA 72 bp | GCGCAGGCTTCTCGCATCACACGCTTGCGCTCCTGTTaGGTCTGGTGCAGGCTGACCCAACGACTGTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: AQASRITRLRSC*VWCRLTQRLSM Trigger: CATGGACAGTCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGTGTGATGCGAGAAGCCTGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR CCA 72 bp | CAGCCTGCCTTGGGTACTTCACAGTACAGTACACGGTaGCGGTCCTCCACGAAGATGCGGGAGACGTGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: QPALGTSQYSTR*RSSTKMRETWR Trigger: CCGCCACGTCTCCCGCATCTTCGTGGAGGACCGCCACCGTGTACTGTACTGTGAAGTACCCAAGGCAGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR GCA 72 bp | TGGGTGATTCTCGATGTGGTCCGCGCCTCCTCGGAGTaGCTGTCCTTGAACCTCGGGAAAGTCAGGTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: WVILDVVRASSE*LSLNLGKVRFP Trigger: CGGGAACCTGACTTTCCCGAGGTTCAAGGACAGGCACTCCGAGGAGGCGCGGACCACATCGAGAATCACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR CCA 72 bp | GAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTaGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: EMGVGQGSRSIV*ASVAHPRATAT Trigger: TGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR CCA 72 bp | ACATGGTCCCAGTGGATGTCCATGCCCACGGGCCGGTaGACATCCAACAGGTACTGGACGAACTCGGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TWSQWMSMPTGR*TSNRYWTNSGN Trigger: GTTCCCCGAGTTCGTCCAGTACCTGTTGGATGTCCACCGGCCCGTGGGCATGGACATCCACTGGGACCATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR-3UTR CAA 90 bp | GACATCCAACAGGTACTGGACGAACTCGGGGAACTGCACACCGGAGCCAGTCCGTTGGAGCAGCCTGCCTaGGGTACTTCACAGTACAGT | + |
|
Preference number: 3 (lower is better) Translates to: DIQQVLDELGELHTGASPLEQPA*GTSQYS Trigger: ACTGTACTGTGAAGTACCCAAGGCAGGCTGCTCCAA...CGGACTGGCTCCGGTGTGCAGTTCCCCGAGTTCGTCCAGTACCTGTTGGATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR GCA 72 bp | GGAGGCCTCTTGGCGACCCGCTGGGTGAATCTCGTGTaGCCTTTTCTGTGGATATCCTCAAGTGGCTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: GGLLATRWVNLV*PFLWISSSGYP Trigger: AGGATAGCCACTTGAGGATATCCACAGAAAAGGGCACACGAGATTCACCCAGCGGGTCGCCAAGAGGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR CCA 72 bp | TTCGGACGAGTTGTTGCCTTGGTTAGTCCCTGCGGCTaGCATCTTTTTGATGAGCAGTCTCCGCCTGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FGRVVALVSPCG*HLFDEQSPPAL Trigger: CAGCGCAGGCGGAGACTGCTCATCAAAAAGATGCCAGCCGCAGGGACTAACCAAGGCAACAACTCGTCCGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR CCA 72 bp | TCCTTGAACCTCGGGAAAGTCAGGTTCCCGGGCGCATaGATGAGACGCAGGAAGAAGTTGGCATCGTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLNLGKVRFPGA*MRRRKKLASSS Trigger: GGAAGACGATGCCAACTTCTTCCTGCGTCTCATCCATGCGCCCGGGAACCTGACTTTCCCGAGGTTCAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR TCA 72 bp | AGGGTTCCCGGACAAAGAGCATCTTGGTGTAGGTACTaGGGCGGTGCACTATGCCCTGCCGGTCAAAAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: RVPGQRASWCRY*GGALCPAGQKY Trigger: ATACTTTTGACCGGCAGGGCATAGTGCACCGCCTCAGTACCTACACCAAGATGCTCTTTGTCCGGGAACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR CCA 72 bp | GTCTCAAACTCAGCCAACCCAATGAGGAAATGGGTGTaGGACAAGGGTCAAGGTCCATTGTCTGGGCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VSNSANPMRKWV*DKGQGPLSGPL Trigger: CAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTGGCTGAGTTTGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGGATAAGGCTCCTACAGGGAGGTaGACAGCTGCCTGTCACTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGHRKAANHVVWYKAKDKAPTGR*TAACHS Trigger: GGAGTGACAGGCAGCTGTCAACCTCCCTGTAGGAGC...CTTATCCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTGAAAACCATGTGCTTTATTCAGATGACCCTGGGTCATAGAAAAGCAGCAAAGGGTCAAGGTCCATaGTCTGGGCCTCTGTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ALKTMCFIQMTLGHRKAAKGQGP*SGPLWP Trigger: GGGCCACAGAGGCCCAGACAATGGACCTTGACCCTT...TGCTGCTTTTCTATGACCCAGGGTCATCTGAATAAAGCACATGGTTTTCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR GCA 72 bp | AGCTCAGCTGAGTTCTTAAAGCATCCATCCGAGTCGTaGTCCGTCTCAAACTCAGCCAACCCAATGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSAEFLKHPSES*SVSNSANPMRK Trigger: TTTCCTCATTGGGTTGGCTGAGTTTGAGACGGAGCACGACTCGGATGGATGCTTTAAGAACTCAGCTGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR TCA 72 bp | GCTAGGGTCCATACAGTATGGCAGAAATGTGGGACCTaGACGGCAAATATAATTTCTACCACAAGGTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ARVHTVWQKCGT*TANIISTTRWS Trigger: GCTCCACCTTGTGGTAGAAATTATATTTGCCGTTCAGGTCCCACATTTCTGCCATACTGTATGGACCCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR TCA 72 bp | GCCCTCAGTACAGGTCCGAGAAAGGTTTGGAGTAGTTaGACATCAGGTAATCCATGTAGTAGAAGTCGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: ALSTGPRKVWSS*TSGNPCSRSRR Trigger: CCTACGACTTCTACTACATGGATTACCTGATGTTCAACTACTCCAAACCTTTCTCGGACCTGTACTGAGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| 3UTR GCA 72 bp | CAGCCTGGAGTAGACACCACTGCTCTGAAAACCATGTaGTTTATTCAGATGACCCTGGGTCATAGAAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QPGVDTTALKTM*FIQMTLGHRKA Trigger: TGCTTTTCTATGACCCAGGGTCATCTGAATAAAGCACATGGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR GCA 72 bp | GACCCCATACAGCCTTCACAGACACCTGCACTCATGTaGACATATTCACGTATTATTAATAGTAAAATACAT | + |
|
Preference number: 3 (lower is better) Translates to: DPIQPSQTPALM*TYSRIINSKIH Trigger: ATGTATTTTACTATTAATAATACGTGAATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTATGGGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR CAA 72 bp | ACACCGGAGCCAGTCCGCAGTGCCTCCCGCGAGGCGTaGGCGCGGTACCGGGCCAGGATAGCCTTGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPEPVRSASREA*ARYRARIALPK Trigger: CTTTGGCAAGGCTATCCTGGCCCGGTACCGCGCCAACGCCTCGCGGGAGGCACTGCGGACTGGCTCCGGTGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| CDS-3UTR TCA 90 bp | GAGGCCGCCTATGCGCAGGTGAGTGGGCATGACCGGCAGACCCCGCCCCTGACCTCCCGGGCGCATGGATaGGACGCAGGAAGAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EAAYAQVSGHDRQTPPLTSRAHG*DAGRSW Trigger: CCAACTTCTTCCTGCGTCTCATCCATGCGCCCGGGA...GGTCAGGGGCGGGGTCTGCCGGTCATGCCCACTCACCTGCGCATAGGCGGCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCCGCCTATGCGCAGGTGAGTGGGCATGACCGGCAGACCCCGCCCCTGACCCGCTCCTGTTGGGTCTaGTGCAGGCTGACCCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: EAAYAQVSGHDRQTPPLTRSCWV*CRLTQR Trigger: TCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCG...GGTCAGGGGCGGGGTCTGCCGGTCATGCCCACTCACCTGCGCATAGGCGGCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GGTCAAGGTCCATTGTCTGGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAACCTCCCGCGAGGCGTTaGCGCGGTACCGGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQGPLSGPLWPTLGPQPQPPARR*RGTGPG Trigger: TCCTGGCCCGGTACCGCGCCAACGCCTCGCGGGAGG...TTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACCTTGACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCAGACGTGGCGGGGAGTaGCAGCTCTGCGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VAHPRATATRPHILRAQSRRGGE*QLCGCC Trigger: GCAGCAGCCGCAGAGCTGTCACTCCCCGCCACGTCT...GGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | CCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCCGGTCCTCCACGAAGATaGGGGAGACGTGGCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRATATRPHILRAQSPEAGPPRR*GRRGGE Trigger: CTCCCCGCCACGTCTCCCGCATCTTCGTGGAGGACC...GGCCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCCGCCTCGCTTGCGCTCCTGTTaGGTCTGGTGCAGGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: GPQPQGLTSSELSPRRPPRLRSC*VWCRLT Trigger: GGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCG...AGGCGGCCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | TGGGACAAGGGTCAAGGTCCATTGTCTGGGCCTCTGTGGCCCACCCTAGGGCCAAGACGTGGCGGGGAGTaGCAGCTCTGCGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WDKGQGPLSGPLWPTLGPRRGGE*QLCGCC Trigger: GCAGCAGCCGCAGAGCTGTCACTCCCCGCCACGTCT...TGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCCGCCTATGCGCAGGTGAGTGGGCATGACCGGCAGACCCCGCCCCTGACCCGAAGTACTGATGGGTaGTTCTCGATGTGGTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EAAYAQVSGHDRQTPPLTRSTDG*FSMWSA Trigger: CGCGGACCACATCGAGAATCACCCATCAGTACTTCG...GGTCAGGGGCGGGGTCTGCCGGTCATGCCCACTCACCTGCGCATAGGCGGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCCGCCTATGCGCCCCAGTGGATGTCCATaGCCACGGGCCGGTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: QPQGLTSSELSPRRPPMRPSGCP*PRAGGH Trigger: ATGTCCACCGGCCCGTGGGCATGGACATCCACTGGG...GCGCATAGGCGGCCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCCGCCTATGCGCAGGTGAGTGGGCATGACCGGCAGACCCCGCCCCTGACCAAGTGGCTATCATGCTaGGGTTGCTGGGGCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: EAAYAQVSGHDRQTPPLTKWLSC*GCWGLM Trigger: CATCAGGCCCCAGCAACCCCAGCATGATAGCCACTT...GGTCAGGGGCGGGGTCTGCCGGTCATGCCCACTCACCTGCGCATAGGCGGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCCGCCTCGCTCCTGTTGGGTCTaGTGCAGGCTGACCCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: GPQPQGLTSSELSPRRPPRSCWV*CRLTQR Trigger: TCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCG...AGGCGGCCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCGCTTGCGCTCCTGTTaGGTCTGGTGCAGGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: TLGPQPQGLTSSELSPRRRLRSC*VWCRLT Trigger: GGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCG...CCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCCGCCTATGCGCAGGTGAGTGGGCATGACCGGCAGACCCCGCCCCTGACCACATCCAACAGGTACTaGACGAACTCGGGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: EAAYAQVSGHDRQTPPLTTSNRY*TNSGNC Trigger: GCAGTTCCCCGAGTTCGTCCAGTACCTGTTGGATGT...GGTCAGGGGCGGGGTCTGCCGGTCATGCCCACTCACCTGCGCATAGGCGGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | TCGACGCTGGGGCCCTCTTCTGGGTCTCAGGCTTCCCTGGACAGCATAGCTCAGCCCAGTGGATGTCCATaGCCACGGGCCGGTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: STLGPSSGSQASLDSIAQPSGCP*PRAGGH Trigger: ATGTCCACCGGCCCGTGGGCATGGACATCCACTGGG...CTGAGCTATGCTGTCCAGGGAAGCCTGAGACCCAGAAGAGGGCCCCAGCGTCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCCGCCTATGCGCAGGTGAGTGGGCATGACCGGCAGACCCCGCCCCTGACCCTCCAAACAGCAGGATaGACGAGAACATGCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EAAYAQVSGHDRQTPPLTLQTAG*TRTCRL Trigger: TAGCCTGCATGTTCTCGTCCATCCTGCTGTTTGGAG...GGTCAGGGGCGGGGTCTGCCGGTCATGCCCACTCACCTGCGCATAGGCGGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCGCTCCTGTTGGGTCTaGTGCAGGCTGACCCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: VAHPRATATRPHILRAQSRSCWV*CRLTQR Trigger: TCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCG...GGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCCGCCTATGCGCAGGTGAGTGGGCATGACCGGCAGACCCCGCCCCTGACCTGGAGCAGCCTGCCTTaGGTACTTCACAGTACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EAAYAQVSGHDRQTPPLTWSSLP*VLHSTV Trigger: TACTGTACTGTGAAGTACCCAAGGCAGGCTGCTCCA...GGTCAGGGGCGGGGTCTGCCGGTCATGCCCACTCACCTGCGCATAGGCGGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCATGCCCACGGGCCGGTaGACATCCAACAGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAHPRATATRPHILRAQSMPTGR*TSNRYW Trigger: CCAGTACCTGTTGGATGTCCACCGGCCCGTGGGCAT...GGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAATGCCCACGGGCCGGTaGACATCCAACAGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: WASVAHPRATATRPHILRMPTGR*TSNRYW Trigger: CCAGTACCTGTTGGATGTCCACCGGCCCGTGGGCAT...TCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | CACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGCTCAAGTGGCTATCATaGTGGGGTTGCTGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPRATATRPHILRAQSPELKWLS*WGCWGL Trigger: CAGGCCCCAGCAACCCCAGCATGATAGCCACTTGAG...CTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCATTGTCTGGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCCACAGCCGGCTAACATaGTCCCAGTGGATGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GPLSGPLWPTLGPQPQGLHSRLT*SQWMSM Trigger: CATGGACATCCACTGGGACCATGTTAGCCGGCTGTG...GAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGTCTTGGTGTAGGTACTaGGGCGGTGCACTATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLGPQPQGLTSSELSPRRSWCRY*GGALCP Trigger: AGGGCATAGTGCACCGCCTCAGTACCTACACCAAGA...CCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | TGGGACAAGGGTCAAGGTCCATTGTCTGGGCCTCTGTGGCCCACCCTAGGGCCACAAAGTCATAGTCGATaGGGCAGGGGCTGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WDKGQGPLSGPLWPTLGPQSHSR*GRGCTA Trigger: GGCTGTGCAGCCCCTGCCTCATCGACTATGACTTTG...TGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCATTGTCTGGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCCCAGTTGGAGCAGCCTaGCTTGGGTACTTCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GPLSGPLWPTLGPQPQGLPVGAA*LGYFTV Trigger: TACTGTGAAGTACCCAAGGCAGGCTGCTCCAACTGG...GAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCCGCCTCTCCAAACAGCAGGATaGACGAGAACATGCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GPQPQGLTSSELSPRRPPLQTAG*TRTCRL Trigger: TAGCCTGCATGTTCTCGTCCATCCTGCTGTTTGGAG...AGGCGGCCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCCGCCTATGCGCTCATGCTGGGGTTGCTaGGGCCTGATGCTGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QPQGLTSSELSPRRPPMRSCWGC*GLMLNF Trigger: AAAGTTCAGCATCAGGCCCCAGCAACCCCAGCATGA...GCGCATAGGCGGCCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGACAGTACAGTACACGGTaGCGGTCCTCCACGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: WASVAHPRATATRPHILRQYSTR*RSSTKM Trigger: CATCTTCGTGGAGGACCGCCACCGTGTACTGTACTG...TCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCACAGCCGGCTAACATaGTCCCAGTGGATGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VAHPRATATRPHILRAQSHSRLT*SQWMSM Trigger: CATGGACATCCACTGGGACCATGTTAGCCGGCTGTG...GGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR CAA 72 bp | AGCGCAGGCTTCTCGCATCACACGCTTGCGCTCCTGTaGGGTCTGGTGCAGGCTGACCCAACGACTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAGFSHHTLALL*GLVQADPTTVH Trigger: ATGGACAGTCGTTGGGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGTGTGATGCGAGAAGCCTGCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| CDS-3UTR GCA 90 bp | GGTCCATTGTCTGGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCTGGCATCGTCTTCCATaGTCTCGAACTTGCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GPLSGPLWPTLGPQPQGLWHRLP*SRTCPQ Trigger: TTGTGGGCAAGTTCGAGAGCATGGAAGACGATGCCA...GAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCCCTCCAAACAGCAGGATaGACGAGAACATGCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PRATATRPHILRAQSPEALQTAG*TRTCRL Trigger: TAGCCTGCATGTTCTCGTCCATCCTGCTGTTTGGAG...GGCCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCATTGTCTGGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCTGGAGCAGCCTGCCTTaGGTACTTCACAGTACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GPLSGPLWPTLGPQPQGLWSSLP*VLHSTV Trigger: TACTGTACTGTGAAGTACCCAAGGCAGGCTGCTCCA...GAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| 3UTR CAA 72 bp | GCCCTGTATTTAGCGCAGGCTTCTCGCATCACACGCTaGCGCTCCTGTTGGGTCTGGTGCAGGCTGACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALYLAQASRITR*RSCWVWCRLTQ Trigger: TTGGGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGTGTGATGCGAGAAGCCTGCGCTAAATACAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| CDS-3UTR GCA 90 bp | ATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGCCTCTGTGGCCCAGTGGATGTCCATaGCCACGGGCCGGTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: MRKWVWDKGQGPLSGPLWPSGCP*PRAGGH Trigger: ATGTCCACCGGCCCGTGGGCATGGACATCCACTGGG...CCACAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCTGGAGCAGCCTGCCTTaGGTACTTCACAGTACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VAHPRATATRPHILRAQSWSSLP*VLHSTV Trigger: TACTGTACTGTGAAGTACCCAAGGCAGGCTGCTCCA...GGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCTGGACGGTGTTGTGTTaGATATCTGCCGTGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VAHPRATATRPHILRAQSWTVLC*ISAVDE Trigger: CTCATCCACGGCAGATATCCAACACAACACCGTCCA...GGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGGAGTAGACACCACTGCTCTGAAAACCATGTGCTTTATTCAGATGACCCCTCCCGCGAGGCGTTaGCGCGGTACCGGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPGVDTTALKTMCFIQMTPPARR*RGTGPG Trigger: TCCTGGCCCGGTACCGCGCCAACGCCTCGCGGGAGG...GGTCATCTGAATAAAGCACATGGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | ATGACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGCCTCCCGCGAGGCGTTaGCGCGGTACCGGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MTLGHRKAANHVVWYKAKPPARR*RGTGPG Trigger: TCCTGGCCCGGTACCGCGCCAACGCCTCGCGGGAGG...CTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | CCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGCCTCTGTCCCGGGCGCATGGATaGGACGCAGGAAGAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PMRKWVWDKGQGPLSGPLSRAHG*DAGRSW Trigger: CCAACTTCTTCCTGCGTCTCATCCATGCGCCCGGGA...CAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | TCGACGCTGGGGCCCTCTTCTGGGTCTCAGGCTTCCCTGGACAGCATAGCTCAGCTCCAAACAGCAGGATaGACGAGAACATGCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: STLGPSSGSQASLDSIAQLQTAG*TRTCRL Trigger: TAGCCTGCATGTTCTCGTCCATCCTGCTGTTTGGAG...CTGAGCTATGCTGTCCAGGGAAGCCTGAGACCCAGAAGAGGGCCCCAGCGTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCCGTGTGCCCTTTTCTGTaGATATCCTCAAGTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PRATATRPHILRAQSPEAVCPFL*ISSSGY Trigger: ATAGCCACTTGAGGATATCCACAGAAAAGGGCACAC...GGCCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GGTGCCTATGAGCTCACAGCACAGCCTGGAGTAGACACCACTGCTCTGAAAACCAAGATGCGGGAGACGTaGCGGGGAGTGACAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GAYELTAQPGVDTTALKTKMRET*RGVTAL Trigger: CAGAGCTGTCACTCCCCGCCACGTCTCCCGCATCTT...GGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTGTGCTGTGAGCTCATAGGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | TCGACGCTGGGGCCCTCTTCTGGGTCTCAGGCTTCCCTGGACAGCATAGCTCAGGACGCAGGAAGAAGTTaGCATCGTCTTCCATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: STLGPSSGSQASLDSIAQDAGRS*HRLPCS Trigger: AGAGCATGGAAGACGATGCCAACTTCTTCCTGCGTC...CTGAGCTATGCTGTCCAGGGAAGCCTGAGACCCAGAAGAGGGCCCCAGCGTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGGATAGACGTGGCGGGGAGTaGCAGCTCTGCGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLGHRKAANHVVWYKAKDRRGGE*QLCGCC Trigger: GCAGCAGCCGCAGAGCTGTCACTCCCCGCCACGTCT...ATCCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | GGTGCCTATGAGCTCACAGCACAGCCTGGAGTAGACACCACTGCTCTGAAAACCCAAAGTCATAGTCGATaGGGCAGGGGCTGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAYELTAQPGVDTTALKTQSHSR*GRGCTA Trigger: GGCTGTGCAGCCCCTGCCTCATCGACTATGACTTTG...GGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTGTGCTGTGAGCTCATAGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCCGCCTAAGGTTTGGAGTAGTTaGACATCAGGTAATCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GPQPQGLTSSELSPRRPPKVWSS*TSGNPC Trigger: ACATGGATTACCTGATGTTCAACTACTCCAAACCTT...AGGCGGCCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | TCGACGCTGGGGCCCTCTTCTGGGTCTCAGGCTTCCCTGGACAGCATAGCTCAGGAGAAGGAAAACTCATaGAGCCAAAGCCCCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: STLGPSSGSQASLDSIAQEKENS*SQSPRF Trigger: AAACCTGGGGCTTTGGCTTCATGAGTTTTCCTTCTC...CTGAGCTATGCTGTCCAGGGAAGCCTGAGACCCAGAAGAGGGCCCCAGCGTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| CDS-3UTR GCA 90 bp | GGTGCCTATGAGCTCACAGCACAGCCTGGAGTAGACACCACTGCTCTGAAAACCCTCAAGTGGCTATCATaGTGGGGTTGCTGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GAYELTAQPGVDTTALKTLKWLS*WGCWGL Trigger: CAGGCCCCAGCAACCCCAGCATGATAGCCACTTGAG...GGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTGTGCTGTGAGCTCATAGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | CAACCCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGCCGCACCCTCTTCCAGTTaGAGCAGCCTGCCTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QPNEEMGVGQGSRSIVWAAPSSS*SSLPWV Trigger: TACCCAAGGCAGGCTGCTCCAACTGGAAGAGGGTGC...GGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | CCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGCCTCTGTCTTGGTGTAGGTACTaGGGCGGTGCACTATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PMRKWVWDKGQGPLSGPLSWCRY*GGALCP Trigger: AGGGCATAGTGCACCGCCTCAGTACCTACACCAAGA...CAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | ACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGGATGGTCCTCCACGAAGATaGGGGAGACGTGGCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLGHRKAANHVVWYKAKDGPPRR*GRRGGE Trigger: CTCCCCGCCACGTCTCCCGCATCTTCGTGGAGGACC...ATCCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGCCTCTGTGGAAGTGGCTATCATGCTaGGGTTGCTGGGGCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: MRKWVWDKGQGPLSGPLWKWLSC*GCWGLM Trigger: CATCAGGCCCCAGCAACCCCAGCATGATAGCCACTT...CCACAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | TCGACGCTGGGGCCCTCTTCTGGGTCTCAGGCTTCCCTGGACAGCATAGCTCAGGTGTGCCCTTTTCTGTaGATATCCTCAAGTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: STLGPSSGSQASLDSIAQVCPFL*ISSSGY Trigger: ATAGCCACTTGAGGATATCCACAGAAAAGGGCACAC...CTGAGCTATGCTGTCCAGGGAAGCCTGAGACCCAGAAGAGGGCCCCAGCGTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | GGGGAATCTGACCCCATACAGCCTTCACAGACACCTGCACTCATGTGCACATATCAAAGTCATAGTCGATaGGGCAGGGGCTGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GESDPIQPSQTPALMCTYQSHSR*GRGCTA Trigger: GGCTGTGCAGCCCCTGCCTCATCGACTATGACTTTG...ATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTATGGGGTCAGATTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | AGGCGGTGCACTATGCCCTGCCGGTCAAAAGTATCCAGGCGCTTAAGGGCGCTGATCCTCCATAAGCTCTaGATTGTCCTTTTCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRCTMPCRSKVSRRLRALILHKL*IVLFTL Trigger: GAGGGTGAAAAGGACAATTCAGAGCTTATGGAGGAT...CAGCGCCCTTAAGCGCCTGGATACTTTTGACCGGCAGGGCATAGTGCACCGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| CDS-3UTR GCA 90 bp | CAACCCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGCCCCAGTTGGAGCAGCCTaGCTTGGGTACTTCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QPNEEMGVGQGSRSIVWAPVGAA*LGYFTV Trigger: TACTGTGAAGTACCCAAGGCAGGCTGCTCCAACTGG...GGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | CAACCCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGCCATACCTGGAACTTGCTaGGGGCTGAGCTCTATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPNEEMGVGQGSRSIVWAIPGTC*GLSSIG Trigger: CCCTATAGAGCTCAGCCCCCAGCAAGTTCCAGGTAT...GGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GCCAACCCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGTCATGCTGGGGTTGCTaGGGCCTGATGCTGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ANPMRKWVWDKGQGPLSGSCWGC*GLMLNF Trigger: AAAGTTCAGCATCAGGCCCCAGCAACCCCAGCATGA...CCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | ATGACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGCGCTTGCGCTCCTGTTaGGTCTGGTGCAGGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: MTLGHRKAANHVVWYKAKRLRSC*VWCRLT Trigger: GGTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCG...CTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | TCAAACTCAGCCAACCCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCAGCACCCTCTTCCAGTTaGAGCAGCCTGCCTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SNSANPMRKWVWDKGQGPAPSSS*SSLPWV Trigger: TACCCAAGGCAGGCTGCTCCAACTGGAAGAGGGTGC...TGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTGGCTGAGTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTGAAAACCATGTGCTTTATTCAGATGACCCTGGGTCATAGAAAAGCAGCAGGTCCTCCACGAAGATaGGGGAGACGTGGCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALKTMCFIQMTLGHRKAAGPPRR*GRRGGE Trigger: CTCCCCGCCACGTCTCCCGCATCTTCGTGGAGGACC...TGCTGCTTTTCTATGACCCAGGGTCATCTGAATAAAGCACATGGTTTTCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GATGTAGGACATCCCTCGACGCTGGGGCCCTCTTCTGGGTCTCAGGCTTCCCTGGATTTATGGGATTCTTaGAACTTACATGCTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DVGHPSTLGPSSGSQASLDLWDS*NLHAGV Trigger: AACCCCAGCATGTAAGTTCCAAGAATCCCATAAATC...CAGGGAAGCCTGAGACCCAGAAGAGGGCCCCAGCGTCGAGGGATGTCCTACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| CDS-3UTR GCA 90 bp | ACAGCACAGCCTGGAGTAGACACCACTGCTCTGAAAACCATGTGCTTTATTCAGCTCAAGTGGCTATCATaGTGGGGTTGCTGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAQPGVDTTALKTMCFIQLKWLS*WGCWGL Trigger: CAGGCCCCAGCAACCCCAGCATGATAGCCACTTGAG...CTGAATAAAGCACATGGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTGTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCATACAGCCTTCACAGACACCTGCACTCATGTGCACATATTCACGTATTAAAGATGCGGGAGACGTaGCGGGGAGTGACAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPYSLHRHLHSCAHIHVLKMRET*RGVTAL Trigger: CAGAGCTGTCACTCCCCGCCACGTCTCCCGCATCTT...TAATACGTGAATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTATGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAATCTGACCCCATACAGCCTTCACAGACACCTGCACTCATGTGCACATATACATCCAACAGGTACTaGACGAACTCGGGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GESDPIQPSQTPALMCTYTSNRY*TNSGNC Trigger: GCAGTTCCCCGAGTTCGTCCAGTACCTGTTGGATGT...ATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTATGGGGTCAGATTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGGATAAGATGCCCACGGGCCGGTaGACATCCAACAGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGHRKAANHVVWYKAKDKMPTGR*TSNRYW Trigger: CCAGTACCTGTTGGATGTCCACCGGCCCGTGGGCAT...CTTATCCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| CDS-3UTR CCA 90 bp | CATAGCTCAGCTGAGTTCTTAAAGCATCCATCCGAGTCGTGCTCCGTCTCAAACCACAGCCGGCTAACATaGTCCCAGTGGATGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HSSAEFLKHPSESCSVSNHSRLT*SQWMSM Trigger: CATGGACATCCACTGGGACCATGTTAGCCGGCTGTG...GTTTGAGACGGAGCACGACTCGGATGGATGCTTTAAGAACTCAGCTGAGCTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| CDS-3UTR CCA 90 bp | TCAAACTCAGCCAACCCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCAACATGCTGGGGTTGCTaGGGCCTGATGCTGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNSANPMRKWVWDKGQGPTCWGC*GLMLNF Trigger: AAAGTTCAGCATCAGGCCCCAGCAACCCCAGCATGT...TGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTGGCTGAGTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| CDS-3UTR CCA 90 bp | CATAGCTCAGCTGAGTTCTTAAAGCATCCATCCGAGTCGTGCTCCGTCTCAAACTCATGCTGGGGTTGCTaGGGCCTGATGCTGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSSAEFLKHPSESCSVSNSCWGC*GLMLNF Trigger: AAAGTTCAGCATCAGGCCCCAGCAACCCCAGCATGA...GTTTGAGACGGAGCACGACTCGGATGGATGCTTTAAGAACTCAGCTGAGCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| CDS-3UTR CCA 90 bp | CCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGCCTCTGGTGTGCCCTTTTCTGTaGATATCCTCAAGTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PMRKWVWDKGQGPLSGPLVCPFL*ISSSGY Trigger: ATAGCCACTTGAGGATATCCACAGAAAAGGGCACAC...CAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGAAAACCATGTGCTTTATTCAGATGACCCTGGGTCATAGAAAAGCAGCAAAGATGCGGGAGACGTaGCGGGGAGTGACAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALKTMCFIQMTLGHRKAAKMRET*RGVTAL Trigger: CAGAGCTGTCACTCCCCGCCACGTCTCCCGCATCTT...TGCTGCTTTTCTATGACCCAGGGTCATCTGAATAAAGCACATGGTTTTCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| CDS-3UTR CCA 90 bp | ACAGCACAGCCTGGAGTAGACACCACTGCTCTGAAAACCATGTGCTTTATTCAGCAGTACAGTACACGGTaGCGGTCCTCCACGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TAQPGVDTTALKTMCFIQQYSTR*RSSTKM Trigger: CATCTTCGTGGAGGACCGCCACCGTGTACTGTACTG...CTGAATAAAGCACATGGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTGTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| CDS-3UTR CCA 90 bp | ACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGGATCAGTACAGTACACGGTaGCGGTCCTCCACGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLGHRKAANHVVWYKAKDQYSTR*RSSTKM Trigger: CATCTTCGTGGAGGACCGCCACCGTGTACTGTACTG...ATCCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTTATTCAGATGACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGCTAACATGGTCCCAGTaGATGTCCATGCCCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFIQMTLGHRKAANHVVWLTWSQ*MSMPTG Trigger: GCCCGTGGGCATGGACATCCACTGGGACCATGTTAG...CCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGTCATCTGAATAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAATCTGACCCCATACAGCCTTCACAGACACCTGCACTCATGTGCACATATGACGCAGGAAGAAGTTaGCATCGTCTTCCATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GESDPIQPSQTPALMCTYDAGRS*HRLPCS Trigger: AGAGCATGGAAGACGATGCCAACTTCTTCCTGCGTC...ATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTATGGGGTCAGATTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTTATTCAGATGACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGCGAAGTACTGATGGGTaGTTCTCGATGTGGTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: CFIQMTLGHRKAANHVVWRSTDG*FSMWSA Trigger: CGCGGACCACATCGAGAATCACCCATCAGTACTTCG...CCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGTCATCTGAATAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGGATAAGCGAAGTACTGATGGGTaGTTCTCGATGTGGTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LGHRKAANHVVWYKAKDKRSTDG*FSMWSA Trigger: CGCGGACCACATCGAGAATCACCCATCAGTACTTCG...CTTATCCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAATCTGACCCCATACAGCCTTCACAGACACCTGCACTCATGTGCACATATCCATGCTCTCGAACTTaGCCACAAAGTCATAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GESDPIQPSQTPALMCTYPCSRT*PQSHSR Trigger: TCGACTATGACTTTGTGGGCAAGTTCGAGAGCATGG...ATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTATGGGGTCAGATTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | ATGACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGACATCCAACAGGTACTaGACGAACTCGGGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: MTLGHRKAANHVVWYKAKTSNRY*TNSGNC Trigger: GCAGTTCCCCGAGTTCGTCCAGTACCTGTTGGATGT...CTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGAAAACCATGTGCTTTATTCAGATGACCCTGGGTCATAGAAAAGCAGCACTAACATGGTCCCAGTaGATGTCCATGCCCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALKTMCFIQMTLGHRKAALTWSQ*MSMPTG Trigger: GCCCGTGGGCATGGACATCCACTGGGACCATGTTAG...TGCTGCTTTTCTATGACCCAGGGTCATCTGAATAAAGCACATGGTTTTCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCACAGCCTGGAGTAGACACCACTGCTCTGAAAACCATGTGCTTTATTCAGTGGCATCGTCTTCCATaGTCTCGAACTTGCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: TAQPGVDTTALKTMCFIQWHRLP*SRTCPQ Trigger: TTGTGGGCAAGTTCGAGAGCATGGAAGACGATGCCA...CTGAATAAAGCACATGGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTGTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCACAGCCTGGAGTAGACACCACTGCTCTGAAAACCATGTGCTTTATTCAGTGGACGGTGTTGTGTTaGATATCTGCCGTGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: TAQPGVDTTALKTMCFIQWTVLC*ISAVDE Trigger: CTCATCCACGGCAGATATCCAACACAACACCGTCCA...CTGAATAAAGCACATGGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTGTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGGATTGGACGGTGTTGTGTTaGATATCTGCCGTGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLGHRKAANHVVWYKAKDWTVLC*ISAVDE Trigger: CTCATCCACGGCAGATATCCAACACAACACCGTCCA...ATCCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | AATCTGACCCCATACAGCCTTCACAGACACCTGCACTCATGTGCACATATTCACGACGCAGGAAGAAGTTaGCATCGTCTTCCATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLTPYSLHRHLHSCAHIHDAGRS*HRLPCS Trigger: AGAGCATGGAAGACGATGCCAACTTCTTCCTGCGTC...GTGAATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTATGGGGTCAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | AATCTGACCCCATACAGCCTTCACAGACACCTGCACTCATGTGCACATATTCACTGGGTGAATCTCGTGTaGCCTTTTCTGTGGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: NLTPYSLHRHLHSCAHIHWVNLV*PFLWIS Trigger: GGATATCCACAGAAAAGGGCACACGAGATTCACCCA...GTGAATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTATGGGGTCAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTGAAAACCATGTGCTTTATTCAGATGACCCTGGGTCATAGAAAAGCAGCACCAGTTGGAGCAGCCTaGCTTGGGTACTTCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALKTMCFIQMTLGHRKAAPVGAA*LGYFTV Trigger: TACTGTGAAGTACCCAAGGCAGGCTGCTCCAACTGG...TGCTGCTTTTCTATGACCCAGGGTCATCTGAATAAAGCACATGGTTTTCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGGAGTAGACACCACTGCTCTGAAAACCATGTGCTTTATTCAGATGACCCCATGCTCTCGAACTTaGCCACAAAGTCATAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QPGVDTTALKTMCFIQMTPCSRT*PQSHSR Trigger: TCGACTATGACTTTGTGGGCAAGTTCGAGAGCATGG...GGTCATCTGAATAAAGCACATGGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCACAGCCTGGAGTAGACACCACTGCTCTGAAAACCATGTGCTTTATTCAGCCATGCTCTCGAACTTaGCCACAAAGTCATAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TAQPGVDTTALKTMCFIQPCSRT*PQSHSR Trigger: TCGACTATGACTTTGTGGGCAAGTTCGAGAGCATGG...CTGAATAAAGCACATGGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTGTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGTGTAGGTACTGAGGCGGTGCACTATGCCCTGCCGGTCAAAAGTATCCAGCGCATCTGTGATTTATaGGATTCTTGGAACTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: LGVGTEAVHYALPVKSIQRICDL*DSWNLH Trigger: ATGTAAGTTCCAAGAATCCCATAAATCACAGATGCG...CTGGATACTTTTGACCGGCAGGGCATAGTGCACCGCCTCAGTACCTACACCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| CDS-3UTR CCA 90 bp | TACAGCCTTCACAGACACCTGCACTCATGTGCACATATTCACGTATTATTAATACTAACATGGTCCCAGTaGATGTCCATGCCCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YSLHRHLHSCAHIHVLLILTWSQ*MSMPTG Trigger: GCCCGTGGGCATGGACATCCACTGGGACCATGTTAG...TATTAATAATACGTGAATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTGAAAACCATGTGCTTTATTCAGATGACCCTGGGTCATAGAAAAGCAGCATGGGTGAATCTCGTGTaGCCTTTTCTGTGGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: ALKTMCFIQMTLGHRKAAWVNLV*PFLWIS Trigger: GGATATCCACAGAAAAGGGCACACGAGATTCACCCA...TGCTGCTTTTCTATGACCCAGGGTCATCTGAATAAAGCACATGGTTTTCAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCACAGCCTGGAGTAGACACCACTGCTCTGAAAACCATGTGCTTTATTCAGAAGGTTTGGAGTAGTTaGACATCAGGTAATCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TAQPGVDTTALKTMCFIQKVWSS*TSGNPC Trigger: ACATGGATTACCTGATGTTCAACTACTCCAAACCTT...CTGAATAAAGCACATGGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTGTGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR TCA 90 bp | TACAGCCTTCACAGACACCTGCACTCATGTGCACATATTCACGTATTATTAATAAAGGTTTGGAGTAGTTaGACATCAGGTAATCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: YSLHRHLHSCAHIHVLLIKVWSS*TSGNPC Trigger: ACATGGATTACCTGATGTTCAACTACTCCAAACCTT...TATTAATAATACGTGAATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCCGCCTATGCGCAGGTGAGTGGGCATGACCGGCAGACCCCGCCCCTGACCAGCACCCTCTTCCAGTaGGAGCAGCCTGCCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EAAYAQVSGHDRQTPPLTSTLFQ*EQPALG Trigger: ACCCAAGGCAGGCTGCTCCAACTGGAAGAGGGTGCT...GGTCAGGGGCGGGGTCTGCCGGTCATGCCCACTCACCTGCGCATAGGCGGCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | CGGAGCCAGTCCGCAGTGCCTCCCGCGAGGCGTTGGCGCGGTACCGGGCCAGGACCAAAGCCCCAGGTTTaGTTCCCAAGGCTCCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSQSAVPPARRWRGTGPGPKPQV*FPRLLK Trigger: TTTCAGGAGCCTTGGGAACAAAACCTGGGGCTTTGG...TCCTGGCCCGGTACCGCGCCAACGCCTCGCGGGAGGCACTGCGGACTGGCTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCCGCCTATGCGCGCTATCATGCTGGGGTaGCTGGGGCCTGATGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QPQGLTSSELSPRRPPMRAIMLG*LGPDAE Trigger: TTCAGCATCAGGCCCCAGCAACCCCAGCATGATAGC...GCGCATAGGCGGCCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | TGGGACAAGGGTCAAGGTCCATTGTCTGGGCCTCTGTGGCCCACCCTAGGGCCAAGGTTGGTCAGGCGCTaGCAGCTGGAGGCCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WDKGQGPLSGPLWPTLGPRLVRR*QLEASW Trigger: CCAAGAGGCCTCCAGCTGCAAGCGCCTGACCAACCT...TGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACCTTGACCCTTGTCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCCGCCTATGCGCGCGGCTGGCATCTTTTaGATGAGCAGTCTCCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QPQGLTSSELSPRRPPMRAAGIF*MSSLRL Trigger: CAGGCGGAGACTGCTCATCAAAAAGATGCCAGCCGC...GCGCATAGGCGGCCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | GGTCAAGGTCCATTGTCTGGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAAACGCTTGCGCTCCTGTaGGGTCTGGTGCAGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GQGPLSGPLWPTLGPQPQTLALL*GLVQAD Trigger: GTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGT...TTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACCTTGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCGGCTGGCATCTTTTaGATGAGCAGTCTCCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WASVAHPRATATRPHILRAAGIF*MSSLRL Trigger: CAGGCGGAGACTGCTCATCAAAAAGATGCCAGCCGC...TCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | GGTCAAGGTCCATTGTCTGGGCCTCTGTGGCCCACCCTAGGGCCACAGCCACAAAGCACCCTCTTCCAGTaGGAGCAGCCTGCCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GQGPLSGPLWPTLGPQPQSTLFQ*EQPALG Trigger: ACCCAAGGCAGGCTGCTCCAACTGGAAGAGGGTGCT...TTGTGGCTGTGGCCCTAGGGTGGGCCACAGAGGCCCAGACAATGGACCTTGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | CCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCCCTTTATACCTGGAACTaGCTGGGGGCTGAGCTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: PRATATRPHILRAQSPEALYTWN*LGAELY Trigger: ATAGAGCTCAGCCCCCAGCAAGTTCCAGGTATAAAG...GGCCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGAGACGCAGGAAGAAGTaGGCATCGTCTTCCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLGPQPQGLTSSELSPRRRRRKK*ASSSML Trigger: GAGCATGGAAGACGATGCCAACTTCTTCCTGCGTCT...CCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTAGGGCCACAGCCACAAGGCCTCACATCCTCAGAGCTCAGTCCCCGGAGGCTTTATACCTGGAACTaGCTGGGGGCTGAGCTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: TLGPQPQGLTSSELSPRRLYTWN*LGAELY Trigger: ATAGAGCTCAGCCCCCAGCAAGTTCCAGGTATAAAG...CCTCCGGGGACTGAGCTCTGAGGATGTGAGGCCTTGTGGCTGTGGCCCTAGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | GCCAACCCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGACGCTTGCGCTCCTGTaGGGTCTGGTGCAGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ANPMRKWVWDKGQGPLSGTLALL*GLVQAD Trigger: GTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGT...CCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | GATGTAGGACATCCCTCGACGCTGGGGCCCTCTTCTGGGTCTCAGGCTTCCCTGTTGGAGCAGCCTGCCTaGGGTACTTCACAGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: DVGHPSTLGPSSGSQASLLEQPA*GTSQYS Trigger: ACTGTACTGTGAAGTACCCAAGGCAGGCTGCTCCAA...CAGGGAAGCCTGAGACCCAGAAGAGGGCCCCAGCGTCGAGGGATGTCCTACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | AATCTGACCCCATACAGCCTTCACAGACACCTGCACTCATGTGCACATATTCACAGGTTGGTCAGGCGCTaGCAGCTGGAGGCCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NLTPYSLHRHLHSCAHIHRLVRR*QLEASW Trigger: CCAAGAGGCCTCCAGCTGCAAGCGCCTGACCAACCT...GTGAATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTATGGGGTCAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | GGGGAATCTGACCCCATACAGCCTTCACAGACACCTGCACTCATGTGCACATATGCGGCTGGCATCTTTTaGATGAGCAGTCTCCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GESDPIQPSQTPALMCTYAAGIF*MSSLRL Trigger: CAGGCGGAGACTGCTCATCAAAAAGATGCCAGCCGC...ATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTATGGGGTCAGATTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCACAGCCTGGAGTAGACACCACTGCTCTGAAAACCATGTGCTTTATTCAGACGCTTGCGCTCCTGTaGGGTCTGGTGCAGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TAQPGVDTTALKTMCFIQTLALL*GLVQAD Trigger: GTCAGCCTGCACCAGACCCAACAGGAGCGCAAGCGT...CTGAATAAAGCACATGGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTGTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | GCCAACCCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGTTGGAGCAGCCTGCCTaGGGTACTTCACAGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: ANPMRKWVWDKGQGPLSGLEQPA*GTSQYS Trigger: ACTGTACTGTGAAGTACCCAAGGCAGGCTGCTCCAA...CCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | CATAGCTCAGCTGAGTTCTTAAAGCATCCATCCGAGTCGTGCTCCGTCTCAAACAGCACCCTCTTCCAGTaGGAGCAGCCTGCCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HSSAEFLKHPSESCSVSNSTLFQ*EQPALG Trigger: ACCCAAGGCAGGCTGCTCCAACTGGAAGAGGGTGCT...GTTTGAGACGGAGCACGACTCGGATGGATGCTTTAAGAACTCAGCTGAGCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | CAACCCAATGAGGAAATGGGTGTGGGACAAGGGTCAAGGTCCATTGTCTGGGCCAGACGCAGGAAGAAGTaGGCATCGTCTTCCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QPNEEMGVGQGSRSIVWARRRKK*ASSSML Trigger: GAGCATGGAAGACGATGCCAACTTCTTCCTGCGTCT...GGCCCAGACAATGGACCTTGACCCTTGTCCCACACCCATTTCCTCATTGGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | GATTCTCGATGTGGTCCGCGCCTCCTCGGAGTGCCTGTCCTTGAACCTCGGGAATCCATAAGCTCTGAATaGTCCTTTTCACCCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DSRCGPRLLGVPVLEPRESISSE*SFSPSP Trigger: TGGAGAGGGTGAAAAGGACAATTCAGAGCTTATGGA...TTCCCGAGGTTCAAGGACAGGCACTCCGAGGAGGCGCGGACCACATCGAGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| CDS-3UTR CAA 90 bp | TGCTTTATTCAGATGACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGAGGTTGGTCAGGCGCTaGCAGCTGGAGGCCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CFIQMTLGHRKAANHVVWRLVRR*QLEASW Trigger: CCAAGAGGCCTCCAGCTGCAAGCGCCTGACCAACCT...CCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGTCATCTGAATAAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | ATGACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGTTGGAGCAGCCTGCCTaGGGTACTTCACAGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: MTLGHRKAANHVVWYKAKLEQPA*GTSQYS Trigger: ACTGTACTGTGAAGTACCCAAGGCAGGCTGCTCCAA...CTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCACAGCCTGGAGTAGACACCACTGCTCTGAAAACCATGTGCTTTATTCAGAGACGCAGGAAGAAGTaGGCATCGTCTTCCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TAQPGVDTTALKTMCFIQRRRKK*ASSSML Trigger: GAGCATGGAAGACGATGCCAACTTCTTCCTGCGTCT...CTGAATAAAGCACATGGTTTTCAGAGCAGTGGTGTCTACTCCAGGCTGTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGTACAAGGCAAAGGATAAGACTTACATGCTGGGGTaGCTGGGGCCTGATGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGHRKAANHVVWYKAKDKTYMLG*LGPDAE Trigger: TTCAGCATCAGGCCCCAGCAACCCCAGCATGTAAGT...CTTATCCTTTGCCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
||
| CDS-3UTR CAA 90 bp | TGCTTTATTCAGATGACCCTGGGTCATAGAAAAGCAGCAAACCACGTGGTTTGGCTTTATACCTGGAACTaGCTGGGGGCTGAGCTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: CFIQMTLGHRKAANHVVWLYTWN*LGAELY Trigger: ATAGAGCTCAGCCCCCAGCAAGTTCCAGGTATAAAG...CCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGTCATCTGAATAAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS-3UTR CAA 90 bp | ACCCCATACAGCCTTCACAGACACCTGCACTCATGTGCACATATTCACGTATTACTTTATACCTGGAACTaGCTGGGGGCTGAGCTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: TPYSLHRHLHSCAHIHVLLYTWN*LGAELY Trigger: ATAGAGCTCAGCCCCCAGCAAGTTCCAGGTATAAAG...TAATACGTGAATATGTGCACATGAGTGCAGGTGTCTGTGAAGGCTGTATGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS GCA 72 bp | GGCCCGCAGCTCCAAACAGCAGGATGGACGAGAACATaGAGGCTAGCCGCATCGTTCCGAGTCGTGGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GPQLQTAGWTRT*RLAASFRVVGS Trigger: TGACCCCACGACTCGGAACGATGCGGCTAGCCTGCATGTTCTCGTCCATCCTGCTGTTTGGAGCTGCGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS GCA 72 bp | TGCTGGGGCCTGATGCTGAACTTTATACCTGGAACTTaGTGGGGGCTGAGCTCTATAGGGTCCTGGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CWGLMLNFIPGT*WGLSSIGSWRL Trigger: CAGCCTCCAGGACCCTATAGAGCTCAGCCCCCAGCAAGTTCCAGGTATAAAGTTCAGCATCAGGCCCCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS GCA 72 bp | GGAGGCCTCTTGGCGACCCGCTGGGTGAATCTCGTGTaGCCTTTTCTGTGGATATCCTCAAGTGGCTATCAT | + |
|
Preference number: 6 (lower is better) Translates to: GGLLATRWVNLV*PFLWISSSGYH Trigger: ATGATAGCCACTTGAGGATATCCACAGAAAAGGGCACACGAGATTCACCCAGCGGGTCGCCAAGAGGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS CCA 72 bp | GCGACCCGCTGGGTGAATCTCGTGTGCCCTTTTCTGTaGATATCCTCAAGTGGCTATCATGCTGGGGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ATRWVNLVCPFL*ISSSGYHAGVA Trigger: AGCAACCCCAGCATGATAGCCACTTGAGGATATCCACAGAAAAGGGCACACGAGATTCACCCAGCGGGTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS CAA 72 bp | TTGCTGGGGCCTGATGCTGAACTTTATACCTGGAACTaGCTGGGGGCTGAGCTCTATAGGGTCCTGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLGPDAELYTWN*LGAELYRVLEA Trigger: AGCCTCCAGGACCCTATAGAGCTCAGCCCCCAGCAAGTTCCAGGTATAAAGTTCAGCATCAGGCCCCAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078686.8 ENSMUST00000154629.3 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS CCA 72 bp | GTGGATATCCTCAAGTGGCTATCATGCTGGGGTTGCTaGGGCCTGATGCTGAACTTTATACCTGGAACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VDILKWLSCWGC*GLMLNFIPGTC Trigger: GCAAGTTCCAGGTATAAAGTTCAGCATCAGGCCCCAGCAACCCCAGCATGATAGCCACTTGAGGATATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS GCA 72 bp | TCTGTGGATATCCTCAAGTGGCTATCATGCTGGGGTTaGTGGGGCCTGATGCTGAACTTTATACCTGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: SVDILKWLSCWG*WGLMLNFIPGT Trigger: AGTTCCAGGTATAAAGTTCAGCATCAGGCCCCAGCAACCCCAGCATGATAGCCACTTGAGGATATCCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS CCA 72 bp | CCCTTTTCTGTGGATATCCTCAAGTGGCTATCATGCTaGGGTTGCTGGGGCCTGATGCTGAACTTTATACCT | + |
|
Preference number: 6 (lower is better) Translates to: PFSVDILKWLSC*GCWGLMLNFIP Trigger: AGGTATAAAGTTCAGCATCAGGCCCCAGCAACCCCAGCATGATAGCCACTTGAGGATATCCACAGAAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
||
| CDS CAA 72 bp | TTCTGTGGATATCCTCAAGTGGCTATCATGCTGGGGTaGCTGGGGCCTGATGCTGAACTTTATACCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FCGYPQVAIMLG*LGPDAELYTWN Trigger: GTTCCAGGTATAAAGTTCAGCATCAGGCCCCAGCAACCCCAGCATGATAGCCACTTGAGGATATCCACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078686.8 ENSMUST00000205259.2 ENSMUST00000238947.2 |
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| CDS CAA 72 bp | GTGATTTATGGGATTCTTGGAACTTACATGCTGGGGTaGCTGGGGCCTGATGCTGAACTTTATACCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: VIYGILGTYMLG*LGPDAELYTWN Trigger: GTTCCAGGTATAAAGTTCAGCATCAGGCCCCAGCAACCCCAGCATGTAAGTTCCAAGAATCCCATAAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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| CDS TCA 72 bp | CATTTTTCTTCCTATGAATGGATCCTCCATAAGCTCTaGATTGTCCTTTTCACCCTCTCCAAACACACCCCC | + |
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Preference number: 6 (lower is better) Translates to: HFSSYEWILHKL*IVLFTLSKHTP Trigger: GGGGGTGTGTTTGGAGAGGGTGAAAAGGACAATTCAGAGCTTATGGAGGATCCATTCATAGGAAGAAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154629.3 |
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