Pregenerated sensors for CHST7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037347Ensembl transcript IDs: ENSMUST00000044138.8
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATGTTGTGGTCACAAATATCCACATTGCACTGTTACTTCCTTTCTaGAAACTTCATCTCAGCCAAGGTGTCTGTCATTACTTAACAGCT | + |
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Preference number: 1 (lower is better) Translates to: YVVVTNIHIALLLPF*KLHLSQGVCHYLTA Trigger: AGCTGTTAAGTAATGACAGACACCTTGGCTGAGATGAAGTTTCCAGAAAGGAAGTAACAGTGCAATGTGGATATTTGTGACCACAACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| 3UTR-3UTR TCA 90 bp | GATACCAAATCAGTCCCAGTGTCTCACAGTGTGATAGATCGCCTCCACCGTGCAGCGGGGGCAGCATGCTaGGTTCACCTTTTTATGGCC | + |
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Preference number: 2 (lower is better) Translates to: DTKSVPVSHSVIDRLHRAAGAAC*VHLFMA Trigger: GGCCATAAAAAGGTGAACTCAGCATGCTGCCCCCGC...TGCACGGTGGAGGCGATCTATCACACTGTGAGACACTGGGACTGATTTGGTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGACACAACTGCACTTGGCCCTTATTCACATTGATGGTTTTGTCCAGACATCCTTTTTATGGCCACTaGCCTGAATACGCCCCGGGG | + |
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Preference number: 2 (lower is better) Translates to: ERHNCTWPLFTLMVLSRHPFYGH*PEYAPG Trigger: CCCCGGGGCGTATTCAGGTCAGTGGCCATAAAAAGG...ATGTCTGGACAAAACCATCAATGTGAATAAGGGCCAAGTGCAGTTGTGTCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAAGGAGAGCTGGGTGAGGCCTTTAGGAAACAATACCAGCCAGACCTTTTATGAATGGCACAGCAGTTaGTACCAAATCAGTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LKESWVRPLGNNTSQTFYEWHSS*YQISPS Trigger: ACTGGGACTGATTTGGTATCAACTGCTGTGCCATTC...ATAAAAGGTCTGGCTGGTATTGTTTCCTAAAGGCCTCACCCAGCTCTCCTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAATTGAAGGAGAGGAGCCAAGTTCAGCCTaGGAAGTACAGCTTTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: RENCLENGSTGRLLIEGEEPSSA*EVQLFL Trigger: TAGGAAAAGCTGTACTTCCCAGGCTGAACTTGGCTC...CTCTCCTTCAATTAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAATTGAAGGAGAGCAAGAGAGACACAACTaGACTTGGCCCTTATTCACA | + |
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Preference number: 2 (lower is better) Translates to: RENCLENGSTGRLLIEGEQERHN*TWPLFT Trigger: TGTGAATAAGGGCCAAGTGCAGTTGTGTCTCTCTTG...CTCTCCTTCAATTAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| 3UTR-3UTR CCA 90 bp | TATTACACCTCTCTTACCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGCTGTTACTTCCTTTCTaGAAACTTCATCTCAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: YYTSLTHQRKLFRKWFYRLLLPF*KLHLSQ Trigger: TTGGCTGAGATGAAGTTTCCAGAAAGGAAGTAACAG...CCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGGTAAGAGAGGTGTAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| 3UTR-3UTR TCA 90 bp | CTTACCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAATATCTCTTCATTATTGTaGGGATGCCTTGTTGAAATG | + |
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Preference number: 2 (lower is better) Translates to: LTHQRKLFRKWFYRKTANISSLL*GCLVEM Trigger: CATTTCAACAAGGCATCCTCACAATAATGAAGAGAT...ATTAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGGTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGAGACACAACTGCACTTGGCCCTTATTCACATTGATGGTTTTGTCCAGACAAGAATGGCACAGCAGTaGATACCAAATCAGTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: RETQLHLALIHIDGFVQTRMAQQ*IPNQSQ Trigger: CTGGGACTGATTTGGTATCAACTGCTGTGCCATTCT...TGTCTGGACAAAACCATCAATGTGAATAAGGGCCAAGTGCAGTTGTGTCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| 3UTR CCA 72 bp | GTCACAAATATCCACATTGCACTGTTACTTCCTTTCTaGAAACTTCATCTCAGCCAAGGTGTCTGTCATTAC | + |
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Preference number: 3 (lower is better) Translates to: VTNIHIALLLPF*KLHLSQGVCHY Trigger: GTAATGACAGACACCTTGGCTGAGATGAAGTTTCCAGAAAGGAAGTAACAGTGCAATGTGGATATTTGTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| 3UTR-3UTR CAA 90 bp | TATTACACCTCTCTTACCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGTATTGTGAGGATGCCTaGTTGAAATGGCTCAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: YYTSLTHQRKLFRKWFYRYCEDA*LKWLKL Trigger: CAGCTTGAGCCATTTCAACAAGGCATCCTCACAATA...CCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGGTAAGAGAGGTGTAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | GTCTCACAGTGTGATAGATCGCCTCCACCGTGCAGCCTCTCCAGTGCGGGGGCACGTTCGCGCCAGGCGTaGACAGCCTCTCGGGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: VSQCDRSPPPCSLSSAGARSRQA*TASRAS Trigger: GGACGCCCGAGAGGCTGTGCACGCCTGGCGCGAACG...TGCCCCCGCACTGGAGAGGCTGCACGGTGGAGGCGATCTATCACACTGTGAGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | GTCTCACAGTGTGATAGATCGCCTCCACCGTGCAGCCTCTCCAGTGCGGGGGCACGGGCATCCACTCCATaGGCCAGCAGCACCCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VSQCDRSPPPCSLSSAGARASTP*ASSTRW Trigger: CCACCGGGTGCTGCTGGCGCATGGAGTGGATGCCCG...TGCCCCCGCACTGGAGAGGCTGCACGGTGGAGGCGATCTATCACACTGTGAGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | GTCTCACAGTGTGATAGATCGCCTCCACCGTGCAGCCTCTCCAGTGCGGGGGCATTGAGGCGCGAGTTGTaGACGGCCCGAGGGTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: VSQCDRSPPPCSLSSAGALRREL*TARGSR Trigger: CCGAGACCCTCGGGCCGTGCACAACTCGCGCCTCAA...TGCCCCCGCACTGGAGAGGCTGCACGGTGGAGGCGATCTATCACACTGTGAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CCA 90 bp | GTCTCACAGTGTGATAGATCGCCTCCACCGTGCAGCCTCTCCAGTGCGGGGGCATGGCGCACCTGCTCTTaGCTCAGACGTTCGCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VSQCDRSPPPCSLSSAGAWRTCS*LRRSRQ Trigger: CTGGCGCGAACGTCTGAGCCAAGAGCAGGTGCGCCA...TGCCCCCGCACTGGAGAGGCTGCACGGTGGAGGCGATCTATCACACTGTGAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CCA 90 bp | GTCTCACAGTGTGATAGATCGCCTCCACCGTGCAGCCTCTCCAGTGCGGGGGCAAGGCAAGCAGACGCATaGCAGGGGCGCAGGCGGTTT | + |
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Preference number: 4 (lower is better) Translates to: VSQCDRSPPPCSLSSAGARQADA*QGRRRF Trigger: AAACCGCCTGCGCCCCTGCCATGCGTCTGCTTGCCT...TGCCCCCGCACTGGAGAGGCTGCACGGTGGAGGCGATCTATCACACTGTGAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCCAAGGTGTCTGTCATTACTTAACAGCTTGTGATGCTCCTGACCAGGAGAAGTGGTCGCCCCTCTaGCGCGTGCGCAGCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSQGVCHYLTACDAPDQEKWSPL*RVRSTW Trigger: CCAGGTGCTGCGCACGCGCCAGAGGGGCGACCACTT...CTCCTGGTCAGGAGCATCACAAGCTGTTAAGTAATGACAGACACCTTGGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR TCA 90 bp | TTGAAGGAGAGCTGGGTGAGGCCTTTAGGAAACAATACCAGCCAGACCTTTTATGTCCCTGCCTCGACTTaGGGCGCGAGTTGTGCACGG | + |
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Preference number: 4 (lower is better) Translates to: LKESWVRPLGNNTSQTFYVPAST*GASCAR Trigger: CCGTGCACAACTCGCGCCTCAAGTCGAGGCAGGGAC...ATAAAAGGTCTGGCTGGTATTGTTTCCTAAAGGCCTCACCCAGCTCTCCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR TCA 90 bp | AATGGCACAGCAGTTGATACCAAATCAGTCCCAGTGTCTCACAGTGTGATAGATGAGGCGGCGAGCAGATaGCCTTGTTGGTCCGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: NGTAVDTKSVPVSHSVIDEAASR*PCWSAS Trigger: GCTGGCGGACCAACAAGGTCATCTGCTCGCCGCCTC...ATCTATCACACTGTGAGACACTGGGACTGATTTGGTATCAACTGCTGTGCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR TCA 90 bp | TTGAAGGAGAGCTGGGTGAGGCCTTTAGGAAACAATACCAGCCAGACCTTTTATGCACCACCTTTAGGTTaGGGCCTGGGTCACGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LKESWVRPLGNNTSQTFYAPPLG*GLGHAA Trigger: TGCTGCGTGACCCAGGCCTCAACCTAAAGGTGGTGC...ATAAAAGGTCTGGCTGGTATTGTTTCCTAAAGGCCTCACCCAGCTCTCCTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | TTGAAGGAGAGCTGGGTGAGGCCTTTAGGAAACAATACCAGCCAGACCTTTTATCCCGGATACAGTGCCTaGCACAGATGCCACATGGGC | + |
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Preference number: 4 (lower is better) Translates to: LKESWVRPLGNNTSQTFYPGYSA*HRCHMG Trigger: GCCCATGTGGCATCTGTGGCAGGCACTGTATCCGGG...ATAAAAGGTCTGGCTGGTATTGTTTCCTAAAGGCCTCACCCAGCTCTCCTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | TTGAAGGAGAGCTGGGTGAGGCCTTTAGGAAACAATACCAGCCAGACCTTTTATTTCCTGCCCTTGTCCTaGTCGCTGTGGCTGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LKESWVRPLGNNTSQTFYFLPLS*SLWLSS Trigger: ACTGGACAGCCACAGCGAGCAGGACAAGGGCAGGAA...ATAAAAGGTCTGGCTGGTATTGTTTCCTAAAGGCCTCACCCAGCTCTCCTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | GTACAGCTTTTCCTATGTTGTGGTCACAAATATCCACATTGCACTGTTACTTCCTCTCTTAGTGCGCCCTaGAGGCTCTCCGCGTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: VQLFLCCGHKYPHCTVTSSLSAP*RLSASP Trigger: GGGCGACGCGGAGAGCCTGCAGGGCGCACTAAGAGA...GGAAGTAACAGTGCAATGTGGATATTTGTGACCACAACATAGGAAAAGCTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | CTCTTACCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTACCAGGGTCCCCAGGCTaGGCGTACAGGCGCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: LLPTRENCLENGSTGRLLPGSPG*AYRRST Trigger: TGTGCTGCGCCTGTACGCGCAGCCTGGGGACCCTGG...TAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGGTAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | AATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAATTGAAGGAGAGCTGGGTCCACCACCGGGTACTTaGGGCACTCGGCCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NCLENGSTGRLLIEGELGPPPGT*GTRPPG Trigger: CCCTGGAGGCCGAGTGCCGCAAGTACCCGGTGGTGG...ACCCAGCTCTCCTTCAATTAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | GAGAGACACAACTGCACTTGGCCCTTATTCACATTGATGGTTTTGTCCAGACATTGCGCAGCACCTGGATaGTTTCGCGCAGCAGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: ERHNCTWPLFTLMVLSRHCAAPG*FRAAVP Trigger: AGGGACTGCTGCGCGAAAGCATCCAGGTGCTGCGCA...ATGTCTGGACAAAACCATCAATGTGAATAAGGGCCAAGTGCAGTTGTGTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CCA 90 bp | CCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAATTGAAAGCAGGCGGCGCAGCTaGGCTTGGGGCTGCCACACC | + |
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Preference number: 4 (lower is better) Translates to: PTRENCLENGSTGRLLIESRRRS*AWGCHT Trigger: GGTGTGGCAGCCCCAAGCCCAGCTGCGCCGCCTGCT...TTCAATTAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CCA 90 bp | AATGGCACAGCAGTTGATACCAAATCAGTCCCAGTGTCTCACAGTGTGATAGATCAGGCGGTTTCCACTTaGCGCACCTGCTCTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: NGTAVDTKSVPVSHSVIDQAVST*RTCSWL Trigger: GAGCCAAGAGCAGGTGCGCCAAGTGGAAACCGCCTG...ATCTATCACACTGTGAGACACTGGGACTGATTTGGTATCAACTGCTGTGCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CCA 90 bp | AATGGCACAGCAGTTGATACCAAATCAGTCCCAGTGTCTCACAGTGTGATAGATGGCCTTGGTCTCCAGTaGTGTCTCCCCTTCCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: NGTAVDTKSVPVSHSVIDGLGLQ*CLPFPD Trigger: GTCAGGGAAGGGGAGACACCACTGGAGACCAAGGCC...ATCTATCACACTGTGAGACACTGGGACTGATTTGGTATCAACTGCTGTGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | CTCTTACCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAGGCCGGGGCAGTTCCTaGCCTTGTCCTGCTCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LLPTRENCLENGSTGRLLGRGSS*PCPARC Trigger: ACAGCGAGCAGGACAAGGGCAGGAACTGCCCCGGCC...TAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGGTAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | AATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAATTGAAGGAGAGCTGGGTACACCCAAGCTGCGCTaGAGGCCGGGGCAGTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: NCLENGSTGRLLIEGELGTPKLR*RPGQFL Trigger: CAGGAACTGCCCCGGCCTGCAGCGCAGCTTGGGTGT...ACCCAGCTCTCCTTCAATTAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CCA 90 bp | TATTACACCTCTCTTACCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGAGCACCCGGTGGAAGTaGTCGCCCCTCTGGCGCGTG | + |
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Preference number: 4 (lower is better) Translates to: YYTSLTHQRKLFRKWFYRSTRWK*SPLWRV Trigger: CACGCGCCAGAGGGGCGACCACTTCCACCGGGTGCT...CCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGGTAAGAGAGGTGTAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CCA 90 bp | CTTACCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAATGCCAGCAGCACCCGGTaGAAGTGGTCGCCCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LTHQRKLFRKWFYRKTANASSTR*KWSPLW Trigger: CCAGAGGGGCGACCACTTCCACCGGGTGCTGCTGGC...ATTAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CCA 90 bp | GAGAGACACAACTGCACTTGGCCCTTATTCACATTGATGGTTTTGTCCAGACATCAGCCCAATTGGCCTTaGTCTCCAGTGGTGTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ERHNCTWPLFTLMVLSRHQPNWP*SPVVSP Trigger: GGGAGACACCACTGGAGACCAAGGCCAATTGGGCTG...ATGTCTGGACAAAACCATCAATGTGAATAAGGGCCAAGTGCAGTTGTGTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR TCA 90 bp | GAGAGACACAACTGCACTTGGCCCTTATTCACATTGATGGTTTTGTCCAGACATAGCCCCGCGTCATATTaGATGCGAAGGCATCAAGCG | + |
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Preference number: 4 (lower is better) Translates to: ERHNCTWPLFTLMVLSRHSPASY*MRRHQA Trigger: CGCTTGATGCCTTCGCATTCAATATGACGCGGGGCT...ATGTCTGGACAAAACCATCAATGTGAATAAGGGCCAAGTGCAGTTGTGTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | CTTACCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAATTCGCGCAGCAGTCCCTaGCTCGACTTGAGGCGCGAG | + |
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Preference number: 4 (lower is better) Translates to: LTHQRKLFRKWFYRKTANSRSSP*LDLRRE Trigger: CTCGCGCCTCAAGTCGAGGCAGGGACTGCTGCGCGA...ATTAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CCA 90 bp | AGAGAGACACAACTGCACTTGGCCCTTATTCACATTGATGGTTTTGTCCAGACAATGTGTTGCTTTTCCTaGGTCACCGCCTCACCGACG | + |
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Preference number: 4 (lower is better) Translates to: RETQLHLALIHIDGFVQTMCCFS*VTASPT Trigger: CGTCGGTGAGGCGGTGACCCAGGAAAAGCAACACAT...TGTCTGGACAAAACCATCAATGTGAATAAGGGCCAAGTGCAGTTGTGTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CCA 90 bp | CCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAATTGAACGCGTGCGCAGCACCTaGATGCTTTCGCGCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PTRENCLENGSTGRLLIERVRST*MLSRSS Trigger: ACTGCTGCGCGAAAGCATCCAGGTGCTGCGCACGCG...TTCAATTAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | CCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAATTGAAAGAAGGACGAGCCGGTaGGCCAGGTGGCATGCACAT | + |
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Preference number: 4 (lower is better) Translates to: PTRENCLENGSTGRLLIERRTSR*ARWHAH Trigger: ATGTGCATGCCACCTGGCGCACCGGCTCGTCCTTCT...TTCAATTAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR GCA 90 bp | CTCTTACCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAAGTGCCTGCCACAGATaGCACATGGGCTCGTACAAG | + |
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Preference number: 4 (lower is better) Translates to: LLPTRENCLENGSTGRLLSACHR*HMGSYK Trigger: CTTGTACGAGCCCATGTGGCATCTGTGGCAGGCACT...TAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGGTAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CCA 90 bp | CTCTTACCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAAGCCGGTGCGCCAGGTaGCATGCACATAGATGTGTT | + |
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Preference number: 4 (lower is better) Translates to: LLPTRENCLENGSTGRLLSRCAR*HAHRCV Trigger: AACACATCTATGTGCATGCCACCTGGCGCACCGGCT...TAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGGTAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CCA 90 bp | GTACAGCTTTTCCTATGTTGTGGTCACAAATATCCACATTGCACTGTTACTTCCGCCACAGATGCCACATaGGCTCGTACAAGTAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: VQLFLCCGHKYPHCTVTSATDAT*ARTSRK Trigger: TTTTCTACTTGTACGAGCCCATGTGGCATCTGTGGC...GGAAGTAACAGTGCAATGTGGATATTTGTGACCACAACATAGGAAAAGCTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| 3UTR CAA 72 bp | TTAGTTTATTACACCTCTCTTACCCACCAGAGAAAATaGTTTAGAAAATGGTTCTACAGGAAGACTGCTAAT | + |
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Preference number: 4 (lower is better) Translates to: LVYYTSLTHQRK*FRKWFYRKTAN Trigger: ATTAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGGTAAGAGAGGTGTAATAAACTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 90 bp | TCCCCGGCCGCCGCCGCCTCCAGGCTCCACACACCCAAGCTGCGCTaGAGGCCGGGGCAGTTCCTGCCCTTGTCCTGCTCGCTGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SPAAAASRLHTPKLR*RPGQFLPLSCSLWL Trigger: CAGCCACAGCGAGCAGGACAAGGGCAGGAACTGCCCCGGCCTGCAGCGCAGCTTGGGTGTGTGGAGCCTGGAGGCGGCGGCGGCCGGGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 90 bp | CACGTTCCCCGGCCGCCGCCGCCTCCAGGCTCCACACACCCAAGCTaGGCTGCAGGCCGGGGCAGTTCCTGCCCTTGTCCTGCTCGCTGT | + |
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Preference number: 5 (lower is better) Translates to: HVPRPPPPPGSTHPS*AAGRGSSCPCPARC Trigger: ACAGCGAGCAGGACAAGGGCAGGAACTGCCCCGGCCTGCAGCGCAGCTTGGGTGTGTGGAGCCTGGAGGCGGCGGCGGCCGGGGAACGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 90 bp | GATCGATCCGGGTTTCCTTCGGCCAGGGACCGCACCTCAGCGCCCTaGTCACGTTCCCCGGCCGCCGCCGCCTCCAGGCTCCACACACCC | + |
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Preference number: 5 (lower is better) Translates to: DRSGFPSARDRTSAP*SRSPAAAASRLHTP Trigger: GGGTGTGTGGAGCCTGGAGGCGGCGGCGGCCGGGGAACGTGAGCAGGGCGCTGAGGTGCGGTCCCTGGCCGAAGGAAACCCGGATCGATC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 90 bp | CCCGGACGGGCATCCACTCCATGCGCCAGCAGCACCCGGTGGAAGTaGTCGCCCCTCTGGCGCGTGCGCAGCACCTGGATGCTTTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGRASTPCASSTRWK*SPLWRVRSTWMLSR Trigger: GCGCGAAAGCATCCAGGTGCTGCGCACGCGCCAGAGGGGCGACCACTTCCACCGGGTGCTGCTGGCGCATGGAGTGGATGCCCGTCCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 90 bp | GGTACTTTCGCAGGCTTTGTCCTCGACGAGTCCCACGTCCGCGCGTaGCCGGGGCGCGGCGGGGCACAGAGGCGGCGAGCAGATGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: GTFAGFVLDESHVRA*PGRGGAQRRRADDL Trigger: AAGGTCATCTGCTCGCCGCCTCTGTGCCCCGCCGCGCCCCGGGCACGCGCGGACGTGGGACTCGTCGAGGACAAAGCCTGCGAAAGTACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 90 bp | TGGCCTCCCGGACGGGCATCCACTCCATGCGCCAGCAGCACCCGGTaGAAGTGGTCGCCCCTCTGGCGCGTGCGCAGCACCTGGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: WPPGRASTPCASSTR*KWSPLWRVRSTWML Trigger: AAGCATCCAGGTGCTGCGCACGCGCCAGAGGGGCGACCACTTCCACCGGGTGCTGCTGGCGCATGGAGTGGATGCCCGTCCGGGAGGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 90 bp | GTTAAGAAGAAATCAGCGCGTGGCGCCGAGGGCAGAGCCCGGGCCTaGCCTCCCGGACGGGCATCCACTCCATGCGCCAGCAGCACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VKKKSARGAEGRARA*PPGRASTPCASSTR Trigger: CCGGGTGCTGCTGGCGCATGGAGTGGATGCCCGTCCGGGAGGCCAGGCCCGGGCTCTGCCCTCGGCGCCACGCGCTGATTTCTTCTTAAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 90 bp | CGCATGGCAGGGGCGCAGGCGGTTTCCACTTGGCGCACCTGCTCTTaGCTCAGACGTTCGCGCCAGGCGTGCACAGCCTCTCGGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RMAGAQAVSTWRTCS*LRRSRQACTASRAS Trigger: GGACGCCCGAGAGGCTGTGCACGCCTGGCGCGAACGTCTGAGCCAAGAGCAGGTGCGCCAAGTGGAAACCGCCTGCGCCCCTGCCATGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 90 bp | CTCTGGCGCGTGCGCAGCACCTGGATGCTTTCGCGCAGCAGTCCCTaGCTCGACTTGAGGCGCGAGTTGTGCACGGCCCGAGGGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LWRVRSTWMLSRSSP*LDLRRELCTARGSR Trigger: CCGAGACCCTCGGGCCGTGCACAACTCGCGCCTCAAGTCGAGGCAGGGACTGCTGCGCGAAAGCATCCAGGTGCTGCGCACGCGCCAGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 90 bp | CATGCGCCAGCAGCACCCGGTGGAAGTGGTCGCCCCTCTGGCGCGTaGGCAGCACCTGGATGCTTTCGCGCAGCAGTCCCTGCCTCGACT | + |
|
Preference number: 5 (lower is better) Translates to: HAPAAPGGSGRPSGA*AAPGCFRAAVPAST Trigger: AGTCGAGGCAGGGACTGCTGCGCGAAAGCATCCAGGTGCTGCGCACGCGCCAGAGGGGCGACCACTTCCACCGGGTGCTGCTGGCGCATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 90 bp | AGCACCCGGTGGAAGTGGTCGCCCCTCTGGCGCGTGCGCAGCACCTaGATGCTTTCGCGCAGCAGTCCCTGCCTCGACTTGAGGCGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: STRWKWSPLWRVRST*MLSRSSPCLDLRRE Trigger: CTCGCGCCTCAAGTCGAGGCAGGGACTGCTGCGCGAAAGCATCCAGGTGCTGCGCACGCGCCAGAGGGGCGACCACTTCCACCGGGTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 90 bp | TCCACTCCATGCGCCAGCAGCACCCGGTGGAAGTGGTCGCCCCTCTaGCGCGTGCGCAGCACCTGGATGCTTTCGCGCAGCAGTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: STPCASSTRWKWSPL*RVRSTWMLSRSSPC Trigger: GCAGGGACTGCTGCGCGAAAGCATCCAGGTGCTGCGCACGCGCCAGAGGGGCGACCACTTCCACCGGGTGCTGCTGGCGCATGGAGTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 90 bp | AGCAGACGCATGGCAGGGGCGCAGGCGGTTTCCACTTGGCGCACCTaGTCTTGGCTCAGACGTTCGCGCCAGGCGTGCACAGCCTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SRRMAGAQAVSTWRT*SWLRRSRQACTASR Trigger: CCGAGAGGCTGTGCACGCCTGGCGCGAACGTCTGAGCCAAGAGCAGGTGCGCCAAGTGGAAACCGCCTGCGCCCCTGCCATGCGTCTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 90 bp | TCCACTTGGCGCACCTGCTCTTGGCTCAGACGTTCGCGCCAGGCGTaGACAGCCTCTCGGGCGTCCCGCGCAGACAAGTGGAAGGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: STWRTCSWLRRSRQA*TASRASRADKWKGR Trigger: TCGTCCCTTCCACTTGTCTGCGCGGGACGCCCGAGAGGCTGTGCACGCCTGGCGCGAACGTCTGAGCCAAGAGCAGGTGCGCCAAGTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 90 bp | CCAGGCTCCACACACCCAAGCTGCGCTGCAGGCCGGGGCAGTTCCTaGCCTTGTCCTGCTCGCTGTGGCTGTCCAGTACAGAGGGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: PGSTHPSCAAGRGSS*PCPARCGCPVQRGQ Trigger: TTGTCCCCTCTGTACTGGACAGCCACAGCGAGCAGGACAAGGGCAGGAACTGCCCCGGCCTGCAGCGCAGCTTGGGTGTGTGGAGCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 90 bp | TCCTGTCGCGTTCGTCCCCACTTCGAGGGTAGGCAAGCAGACGCATaGCAGGGGCGCAGGCGGTTTCCACTTGGCGCACCTGCTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCRVRPHFEGRQADA*QGRRRFPLGAPALG Trigger: GCCAAGAGCAGGTGCGCCAAGTGGAAACCGCCTGCGCCCCTGCCATGCGTCTGCTTGCCTACCCTCGAAGTGGGGACGAACGCGACAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS TCA 90 bp | TGCGCAGCACCTGGATGCTTTCGCGCAGCAGTCCCTGCCTCGACTTaGGGCGCGAGTTGTGCACGGCCCGAGGGTCTCGGAAGAGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CAAPGCFRAAVPAST*GASCARPEGLGRVA Trigger: TGCAACTCTTCCGAGACCCTCGGGCCGTGCACAACTCGCGCCTCAAGTCGAGGCAGGGACTGCTGCGCGAAAGCATCCAGGTGCTGCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 90 bp | GAAGGGACGATCGGCGCCGTAGGCCGAGCCCCGCGTCATATTGAATaGGAAGGCATCAAGCGCGGCGAGTGTCCGCAACCCAGAGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: EGTIGAVGRAPRHIE*EGIKRGECPQPREA Trigger: CGCTTCTCTGGGTTGCGGACACTCGCCGCGCTTGATGCCTTCGCATTCAATATGACGCGGGGCTCGGCCTACGGCGCCGATCGTCCCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS TCA 90 bp | TGTGCACGGCCCGAGGGTCTCGGAAGAGTTGCACCACCTTTAGGTTaGGGCCTGGGTCACGCAGCAGAGGGACCAGCACTCCCAGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CARPEGLGRVAPPLG*GLGHAAEGPALPGP Trigger: TGGACCTGGGAGTGCTGGTCCCTCTGCTGCGTGACCCAGGCCTCAACCTAAAGGTGGTGCAACTCTTCCGAGACCCTCGGGCCGTGCACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS TCA 90 bp | AGTGGAAGGGACGATCGGCGCCGTAGGCCGAGCCCCGCGTCATATTaGATGCGAAGGCATCAAGCGCGGCGAGTGTCCGCAACCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGRDDRRRRPSPASY*MRRHQARRVSATQR Trigger: TCTCTGGGTTGCGGACACTCGCCGCGCTTGATGCCTTCGCATTCAATATGACGCGGGGCTCGGCCTACGGCGCCGATCGTCCCTTCCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 90 bp | GACTTGAGGCGCGAGTTGTGCACGGCCCGAGGGTCTCGGAAGAGTTaGACCACCTTTAGGTTGAGGCCTGGGTCACGCAGCAGAGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: DLRRELCTARGSRKS*TTFRLRPGSRSRGT Trigger: GGTCCCTCTGCTGCGTGACCCAGGCCTCAACCTAAAGGTGGTGCAACTCTTCCGAGACCCTCGGGCCGTGCACAACTCGCGCCTCAAGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 90 bp | ATAGCAGGTCGCGAAGCCACGCTTCACAGATCACCTCAAGCGCGCTaGTTAAGAAGAAATCAGCGCGTGGCGCCGAGGGCAGAGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: IAGREATLHRSPQAR*LRRNQRVAPRAEPG Trigger: CCCGGGCTCTGCCCTCGGCGCCACGCGCTGATTTCTTCTTAACCAGCGCGCTTGAGGTGATCTGTGAAGCGTGGCTTCGCGACCTGCTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 90 bp | ACACCCAAGCTGCGCTGCAGGCCGGGGCAGTTCCTGCCCTTGTCCTaGTCGCTGTGGCTGTCCAGTACAGAGGGGACAAGAAGTAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TPKLRCRPGQFLPLS*SLWLSSTEGTRSSK Trigger: TTTGCTACTTCTTGTCCCCTCTGTACTGGACAGCCACAGCGAGCAGGACAAGGGCAGGAACTGCCCCGGCCTGCAGCGCAGCTTGGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 90 bp | ATGCTTTCGCGCAGCAGTCCCTGCCTCGACTTGAGGCGCGAGTTGTaGACGGCCCGAGGGTCTCGGAAGAGTTGCACCACCTTTAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MLSRSSPCLDLRREL*TARGSRKSCTTFRL Trigger: CAACCTAAAGGTGGTGCAACTCTTCCGAGACCCTCGGGCCGTGCACAACTCGCGCCTCAAGTCGAGGCAGGGACTGCTGCGCGAAAGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS TCA 90 bp | ACACAGCCCAATTGGCCTTGGTCTCCAGTGGTGTCTCCCCTTCCCTaGCGGTCTTCCTGTCGCGTTCGTCCCCACTTCGAGGGTAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TQPNWPWSPVVSPLP*RSSCRVRPHFEGRQ Trigger: TTGCCTACCCTCGAAGTGGGGACGAACGCGACAGGAAGACCGTCAGGGAAGGGGAGACACCACTGGAGACCAAGGCCAATTGGGCTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CAA 90 bp | CTCAGCCAAGGTGTCTGTCATTACTTAACAGCTTGTGATGCTCCTGACCAGGAGACCACCACCGGGTACTaGCGGCACTCGGCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSQGVCHYLTACDAPDQETTTGY*RHSASR Trigger: CCTGGAGGCCGAGTGCCGCAAGTACCCGGTGGTGGT...CTCCTGGTCAGGAGCATCACAAGCTGTTAAGTAATGACAGACACCTTGGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CAA 90 bp | GATACCAAATCAGTCCCAGTGTCTCACAGTGTGATAGATCGCCTCCACCGTGCAAGTCCCTGCCTCGACTaGAGGCGCGAGTTGTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: DTKSVPVSHSVIDRLHRASPCLD*RRELCT Trigger: CGTGCACAACTCGCGCCTCAAGTCGAGGCAGGGACT...TGCACGGTGGAGGCGATCTATCACACTGTGAGACACTGGGACTGATTTGGTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CAA 90 bp | CTCAGCCAAGGTGTCTGTCATTACTTAACAGCTTGTGATGCTCCTGACCAGGAGTGCACCACCTTTAGGTaGAGGCCTGGGTCACGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSQGVCHYLTACDAPDQECTTFR*RPGSRS Trigger: GCTGCGTGACCCAGGCCTCAACCTAAAGGTGGTGCA...CTCCTGGTCAGGAGCATCACAAGCTGTTAAGTAATGACAGACACCTTGGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CAA 90 bp | TTGAAGGAGAGCTGGGTGAGGCCTTTAGGAAACAATACCAGCCAGACCTTTTATGCAGGCGGTTTCCACTaGGCGCACCTGCTCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LKESWVRPLGNNTSQTFYAGGFH*AHLLLA Trigger: AGCCAAGAGCAGGTGCGCCAAGTGGAAACCGCCTGC...ATAAAAGGTCTGGCTGGTATTGTTTCCTAAAGGCCTCACCCAGCTCTCCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CAA 90 bp | GTACAGCTTTTCCTATGTTGTGGTCACAAATATCCACATTGCACTGTTACTTCCGACTTGAGGCGCGAGTaGTGCACGGCCCGAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VQLFLCCGHKYPHCTVTSDLRRE*CTARGS Trigger: AGACCCTCGGGCCGTGCACAACTCGCGCCTCAAGTC...GGAAGTAACAGTGCAATGTGGATATTTGTGACCACAACATAGGAAAAGCTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CAA 90 bp | GAGAGACACAACTGCACTTGGCCCTTATTCACATTGATGGTTTTGTCCAGACATAGTAGCCGCACGTCTTaGATGACCACCACCGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ERHNCTWPLFTLMVLSRHSSRTS*MTTTGY Trigger: GTACCCGGTGGTGGTCATCAAAGACGTGCGGCTACT...ATGTCTGGACAAAACCATCAATGTGAATAAGGGCCAAGTGCAGTTGTGTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CAA 90 bp | AATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAATTGAAGGAGAGCTGGGTTTGGCGCACCTGCTCTaGGCTCAGACGTTCGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NCLENGSTGRLLIEGELGLAHLL*AQTFAP Trigger: TGGCGCGAACGTCTGAGCCAAGAGCAGGTGCGCCAA...ACCCAGCTCTCCTTCAATTAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CAA 90 bp | CTTCATCTCAGCCAAGGTGTCTGTCATTACTTAACAGCTTGTGATGCTCCTGACATGCACATAGATGTGTaGCTTTTCCTGGGTCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: LHLSQGVCHYLTACDAPDMHIDV*LFLGHR Trigger: GCGGTGACCCAGGAAAAGCAACACATCTATGTGCAT...GTCAGGAGCATCACAAGCTGTTAAGTAATGACAGACACCTTGGCTGAGATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CAA 90 bp | GTACAGCTTTTCCTATGTTGTGGTCACAAATATCCACATTGCACTGTTACTTCCGTACTTTCGCAGGCTTaGTCCTCGACGAGTCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: VQLFLCCGHKYPHCTVTSVLSQA*SSTSPT Trigger: CGTGGGACTCGTCGAGGACAAAGCCTGCGAAAGTAC...GGAAGTAACAGTGCAATGTGGATATTTGTGACCACAACATAGGAAAAGCTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CAA 90 bp | TTTAATCAAGAGAGACACAACTGCACTTGGCCCTTATTCACATTGATGGTTTTGAAGAGCAGCGTGAACTaGCAATACTCTCGGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FNQERHNCTWPLFTLMVLKSSVN*QYSRRR Trigger: GCGGCGCCGAGAGTATTGCAAGTTCACGCTGCTCTT...CAAAACCATCAATGTGAATAAGGGCCAAGTGCAGTTGTGTCTCTCTTGATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CAA 90 bp | TTTAATCAAGAGAGACACAACTGCACTTGGCCCTTATTCACATTGATGGTTTTGACGTCCGGGTGCTGGTaGAAGAGTTCGCCCAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FNQERHNCTWPLFTLMVLTSGCW*KSSPKK Trigger: CTTCTTGGGCGAACTCTTCAACCAGCACCCGGACGT...CAAAACCATCAATGTGAATAAGGGCCAAGTGCAGTTGTGTCTCTCTTGATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CAA 90 bp | CTCTTACCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAGAGCAGATGACCTTGTaGGTCCGCCAGCGGAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLPTRENCLENGSTGRLLEQMTL*VRQRKS Trigger: GCTTTTCCGCTGGCGGACCAACAAGGTCATCTGCTC...TAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGGTAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS-3UTR CAA 90 bp | CCCACCAGAGAAAATTGTTTAGAAAATGGTTCTACAGGAAGACTGCTAATTGAAGGCGAGCAGATGACCTaGTTGGTCCGCCAGCGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PTRENCLENGSTGRLLIEGEQMT*LVRQRK Trigger: TTTCCGCTGGCGGACCAACAAGGTCATCTGCTCGCC...TTCAATTAGCAGTCTTCCTGTAGAACCATTTTCTAAACAATTTTCTCTGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 72 bp | GGGTTTCCTTCGGCCAGGGACCGCACCTCAGCGCCCTaGTCACGTTCCCCGGCCGCCGCCGCCTCCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GFPSARDRTSAP*SRSPAAAASRL Trigger: GAGCCTGGAGGCGGCGGCGGCCGGGGAACGTGAGCAGGGCGCTGAGGTGCGGTCCCTGGCCGAAGGAAACCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 90 bp | TCCAGGGCGCGGAGCGAAACGGGCGGGCAGGTACTTTCGCAGGCTTaGTCCTCGACGAGTCCCACGTCCGCGCGTGCCCGGGGCGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SRARSETGGQVLSQA*SSTSPTSARARGAA Trigger: CGCCGCGCCCCGGGCACGCGCGGACGTGGGACTCGTCGAGGACAAAGCCTGCGAAAGTACCTGCCCGCCCGTTTCGCTCCGCGCCCTGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 72 bp | GCCGCCGCCTCCAGGCTCCACACACCCAAGCTGCGCTaGAGGCCGGGGCAGTTCCTGCCCTTGTCCTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: AAASRLHTPKLR*RPGQFLPLSCS Trigger: CGAGCAGGACAAGGGCAGGAACTGCCCCGGCCTGCAGCGCAGCTTGGGTGTGTGGAGCCTGGAGGCGGCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 72 bp | GGACGGGCATCCACTCCATGCGCCAGCAGCACCCGGTaGAAGTGGTCGCCCCTCTGGCGCGTGCGCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: GRASTPCASSTR*KWSPLWRVRST Trigger: GGTGCTGCGCACGCGCCAGAGGGGCGACCACTTCCACCGGGTGCTGCTGGCGCATGGAGTGGATGCCCGTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 72 bp | TGCGCCAGCAGCACCCGGTGGAAGTGGTCGCCCCTCTaGCGCGTGCGCAGCACCTGGATGCTTTCGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CASSTRWKWSPL*RVRSTWMLSRS Trigger: GCTGCGCGAAAGCATCCAGGTGCTGCGCACGCGCCAGAGGGGCGACCACTTCCACCGGGTGCTGCTGGCGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 90 bp | ACGCATGGCAGGGGCGCAGGCGGTTTCCACTTGGCGCACCTGCTCTaGGCTCAGACGTTCGCGCCAGGCGTGCACAGCCTCTCGGGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: THGRGAGGFHLAHLL*AQTFAPGVHSLSGV Trigger: GACGCCCGAGAGGCTGTGCACGCCTGGCGCGAACGTCTGAGCCAAGAGCAGGTGCGCCAAGTGGAAACCGCCTGCGCCCCTGCCATGCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 72 bp | GCCGAGTCCGGTGCTCGCTCCCCAGGGTCCCCAGGCTaGGCGTACAGGCGCAGCACAGAGAAATCACAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AESGARSPGSPG*AYRRSTEKSQR Trigger: CCGCTGTGATTTCTCTGTGCTGCGCCTGTACGCGCAGCCTGGGGACCCTGGGGAGCGAGCACCGGACTCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 72 bp | GCAGCACCCGGTGGAAGTGGTCGCCCCTCTGGCGCGTaGGCAGCACCTGGATGCTTTCGCGCAGCAGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AAPGGSGRPSGA*AAPGCFRAAVP Trigger: AGGGACTGCTGCGCGAAAGCATCCAGGTGCTGCGCACGCGCCAGAGGGGCGACCACTTCCACCGGGTGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
||
| CDS GCA 72 bp | CGCACCTGCTCTTGGCTCAGACGTTCGCGCCAGGCGTaGACAGCCTCTCGGGCGTCCCGCGCAGACAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RTCSWLRRSRQA*TASRASRADKW Trigger: CCACTTGTCTGCGCGGGACGCCCGAGAGGCTGTGCACGCCTGGCGCGAACGTCTGAGCCAAGAGCAGGTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 72 bp | GCATCCACTCCATGCGCCAGCAGCACCCGGTGGAAGTaGTCGCCCCTCTGGCGCGTGCGCAGCACCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: ASTPCASSTRWK*SPLWRVRSTWM Trigger: CATCCAGGTGCTGCGCACGCGCCAGAGGGGCGACCACTTCCACCGGGTGCTGCTGGCGCATGGAGTGGATGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
||
| CDS CAA 72 bp | GGCGCGGCGGGGCACAGAGGCGGCGAGCAGATGACCTaGTTGGTCCGCCAGCGGAAAAGCATGGCCGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GAAGHRGGEQMT*LVRQRKSMAVV Trigger: CACCACGGCCATGCTTTTCCGCTGGCGGACCAACAAGGTCATCTGCTCGCCGCCTCTGTGCCCCGCCGCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 72 bp | CGGAGCGAAACGGGCGGGCAGGTACTTTCGCAGGCTTaGTCCTCGACGAGTCCCACGTCCGCGCGTGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RSETGGQVLSQA*SSTSPTSARAR Trigger: CCGGGCACGCGCGGACGTGGGACTCGTCGAGGACAAAGCCTGCGAAAGTACCTGCCCGCCCGTTTCGCTCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS TCA 72 bp | GGTAGCGACGCCTCAGCCAGGCGGGCGCGCCGCGGGTaGATAGCAGGTCGCGAAGCCACGCTTCACAGATCA | + |
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Preference number: 6 (lower is better) Translates to: GSDASARRARRG*IAGREATLHRS Trigger: TGATCTGTGAAGCGTGGCTTCGCGACCTGCTATTCACCCGCGGCGCGCCCGCCTGGCTGAGGCGTCGCTACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 72 bp | GGGGCGCAGGCGGTTTCCACTTGGCGCACCTGCTCTTaGCTCAGACGTTCGCGCCAGGCGTGCACAGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GAQAVSTWRTCS*LRRSRQACTAS Trigger: AGAGGCTGTGCACGCCTGGCGCGAACGTCTGAGCCAAGAGCAGGTGCGCCAAGTGGAAACCGCCTGCGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 72 bp | CCCAAGCTGCGCTGCAGGCCGGGGCAGTTCCTGCCCTaGTCCTGCTCGCTGTGGCTGTCCAGTACAGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: PKLRCRPGQFLP*SCSLWLSSTEG Trigger: CCCCTCTGTACTGGACAGCCACAGCGAGCAGGACAAGGGCAGGAACTGCCCCGGCCTGCAGCGCAGCTTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 72 bp | GCGGCGGGGCACAGAGGCGGCGAGCAGATGACCTTGTaGGTCCGCCAGCGGAAAAGCATGGCCGTGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: AAGHRGGEQMTL*VRQRKSMAVVR Trigger: CCTCACCACGGCCATGCTTTTCCGCTGGCGGACCAACAAGGTCATCTGCTCGCCGCCTCTGTGCCCCGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 72 bp | AGGGGCGCAGGCGGTTTCCACTTGGCGCACCTGCTCTaGGCTCAGACGTTCGCGCCAGGCGTGCACAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RGAGGFHLAHLL*AQTFAPGVHSL Trigger: GAGGCTGTGCACGCCTGGCGCGAACGTCTGAGCCAAGAGCAGGTGCGCCAAGTGGAAACCGCCTGCGCCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 90 bp | CGCAGCAGAGGGACCAGCACTCCCAGGTCCAGTAGCCGCACGTCTTaGATGACCACCACCGGGTACTTGCGGCACTCGGCCTCCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: RSRGTSTPRSSSRTS*MTTTGYLRHSASRA Trigger: CGCCCTGGAGGCCGAGTGCCGCAAGTACCCGGTGGTGGTCATCAAAGACGTGCGGCTACTGGACCTGGGAGTGCTGGTCCCTCTGCTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 90 bp | AGGGTAGGCAAGCAGACGCATGGCAGGGGCGCAGGCGGTTTCCACTaGGCGCACCTGCTCTTGGCTCAGACGTTCGCGCCAGGCGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: RVGKQTHGRGAGGFH*AHLLLAQTFAPGVH Trigger: GTGCACGCCTGGCGCGAACGTCTGAGCCAAGAGCAGGTGCGCCAAGTGGAAACCGCCTGCGCCCCTGCCATGCGTCTGCTTGCCTACCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS TCA 72 bp | CCTTGTTGGTCCGCCAGCGGAAAAGCATGGCCGTGGTaGGGTTGGCCGAGTCCGGTGCTCGCTCCCCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: PCWSASGKAWPW*GWPSPVLAPQG Trigger: ACCCTGGGGAGCGAGCACCGGACTCGGCCAACCTCACCACGGCCATGCTTTTCCGCTGGCGGACCAACAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS TCA 72 bp | CCTGGATGCTTTCGCGCAGCAGTCCCTGCCTCGACTTaGGGCGCGAGTTGTGCACGGCCCGAGGGTCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: PGCFRAAVPAST*GASCARPEGLG Trigger: TCCGAGACCCTCGGGCCGTGCACAACTCGCGCCTCAAGTCGAGGCAGGGACTGCTGCGCGAAAGCATCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 72 bp | CGGAAGAGGGAGCGCAGCATGTCTCTTAGTGCGCCCTaGAGGCTCTCCGCGTCGCCCGGATACAGTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RKRERSMSLSAP*RLSASPGYSAC Trigger: GCAGGCACTGTATCCGGGCGACGCGGAGAGCCTGCAGGGCGCACTAAGAGACATGCTGCGCTCCCTCTTCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 72 bp | CGCAGCAGTCCCTGCCTCGACTTGAGGCGCGAGTTGTaGACGGCCCGAGGGTCTCGGAAGAGTTGCACCACC | + |
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Preference number: 6 (lower is better) Translates to: RSSPCLDLRREL*TARGSRKSCTT Trigger: GGTGGTGCAACTCTTCCGAGACCCTCGGGCCGTGCACAACTCGCGCCTCAAGTCGAGGCAGGGACTGCTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 72 bp | GTGCGCAGCACCTGGATGCTTTCGCGCAGCAGTCCCTaGCTCGACTTGAGGCGCGAGTTGTGCACGGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: VRSTWMLSRSSP*LDLRRELCTAR Trigger: TCGGGCCGTGCACAACTCGCGCCTCAAGTCGAGGCAGGGACTGCTGCGCGAAAGCATCCAGGTGCTGCGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 72 bp | ATGGCAGGGGCGCAGGCGGTTTCCACTTGGCGCACCTaGTCTTGGCTCAGACGTTCGCGCCAGGCGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: MAGAQAVSTWRT*SWLRRSRQACT Trigger: TGTGCACGCCTGGCGCGAACGTCTGAGCCAAGAGCAGGTGCGCCAAGTGGAAACCGCCTGCGCCCCTGCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 72 bp | TGGAAGTGGTCGCCCCTCTGGCGCGTGCGCAGCACCTaGATGCTTTCGCGCAGCAGTCCCTGCCTCGACTTG | + |
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Preference number: 6 (lower is better) Translates to: WKWSPLWRVRST*MLSRSSPCLDL Trigger: CAAGTCGAGGCAGGGACTGCTGCGCGAAAGCATCCAGGTGCTGCGCACGCGCCAGAGGGGCGACCACTTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 72 bp | AGCAGACGCATGGCAGGGGCGCAGGCGGTTTCCACTTaGCGCACCTGCTCTTGGCTCAGACGTTCGCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SRRMAGAQAVST*RTCSWLRRSRQ Trigger: CTGGCGCGAACGTCTGAGCCAAGAGCAGGTGCGCCAAGTGGAAACCGCCTGCGCCCCTGCCATGCGTCTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 72 bp | TCGCGCAGCAGTCCCTGCCTCGACTTGAGGCGCGAGTaGTGCACGGCCCGAGGGTCTCGGAAGAGTTGCACC | + |
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Preference number: 6 (lower is better) Translates to: SRSSPCLDLRRE*CTARGSRKSCT Trigger: GGTGCAACTCTTCCGAGACCCTCGGGCCGTGCACAACTCGCGCCTCAAGTCGAGGCAGGGACTGCTGCGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 72 bp | ACCTGGATGCTTTCGCGCAGCAGTCCCTGCCTCGACTaGAGGCGCGAGTTGTGCACGGCCCGAGGGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: TWMLSRSSPCLD*RRELCTARGSR Trigger: CCGAGACCCTCGGGCCGTGCACAACTCGCGCCTCAAGTCGAGGCAGGGACTGCTGCGCGAAAGCATCCAGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 90 bp | GTGCGCAGCACCTGGATGCTTTCGCGCAGCAGTCCCTGCCTCGACTaGAGGCGCGAGTTGTGCACGGCCCGAGGGTCTCGGAAGAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: VRSTWMLSRSSPCLD*RRELCTARGSRKSC Trigger: GCAACTCTTCCGAGACCCTCGGGCCGTGCACAACTCGCGCCTCAAGTCGAGGCAGGGACTGCTGCGCGAAAGCATCCAGGTGCTGCGCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS TCA 72 bp | GACGATCGGCGCCGTAGGCCGAGCCCCGCGTCATATTaGATGCGAAGGCATCAAGCGCGGCGAGTGTCCGCA | + |
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Preference number: 6 (lower is better) Translates to: DDRRRRPSPASY*MRRHQARRVSA Trigger: TGCGGACACTCGCCGCGCTTGATGCCTTCGCATTCAATATGACGCGGGGCTCGGCCTACGGCGCCGATCGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 72 bp | CTGCGCTGCAGGCCGGGGCAGTTCCTGCCCTTGTCCTaGTCGCTGTGGCTGTCCAGTACAGAGGGGACAAGA | + |
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Preference number: 6 (lower is better) Translates to: LRCRPGQFLPLS*SLWLSSTEGTR Trigger: TCTTGTCCCCTCTGTACTGGACAGCCACAGCGAGCAGGACAAGGGCAGGAACTGCCCCGGCCTGCAGCGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 72 bp | ACACACCCAAGCTGCGCTGCAGGCCGGGGCAGTTCCTaGCCTTGTCCTGCTCGCTGTGGCTGTCCAGTACAG | + |
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Preference number: 6 (lower is better) Translates to: THPSCAAGRGSS*PCPARCGCPVQ Trigger: CTGTACTGGACAGCCACAGCGAGCAGGACAAGGGCAGGAACTGCCCCGGCCTGCAGCGCAGCTTGGGTGTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 72 bp | ATCGGCGCCGTAGGCCGAGCCCCGCGTCATATTGAATaGGAAGGCATCAAGCGCGGCGAGTGTCCGCAACCC | + |
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Preference number: 6 (lower is better) Translates to: IGAVGRAPRHIE*EGIKRGECPQP Trigger: GGGTTGCGGACACTCGCCGCGCTTGATGCCTTCGCATTCAATATGACGCGGGGCTCGGCCTACGGCGCCGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CCA 72 bp | GTTCGTCCCCACTTCGAGGGTAGGCAAGCAGACGCATaGCAGGGGCGCAGGCGGTTTCCACTTGGCGCACCT | + |
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Preference number: 6 (lower is better) Translates to: VRPHFEGRQADA*QGRRRFPLGAP Trigger: AGGTGCGCCAAGTGGAAACCGCCTGCGCCCCTGCCATGCGTCTGCTTGCCTACCCTCGAAGTGGGGACGAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 72 bp | AGTAGCCGCACGTCTTTGATGACCACCACCGGGTACTaGCGGCACTCGGCCTCCAGGGCGCGGAGCGAAACG | + |
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Preference number: 6 (lower is better) Translates to: SSRTSLMTTTGY*RHSASRARSET Trigger: CGTTTCGCTCCGCGCCCTGGAGGCCGAGTGCCGCAAGTACCCGGTGGTGGTCATCAAAGACGTGCGGCTACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 72 bp | GGGACCAGCACTCCCAGGTCCAGTAGCCGCACGTCTTaGATGACCACCACCGGGTACTTGCGGCACTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: GTSTPRSSSRTS*MTTTGYLRHSA Trigger: GGCCGAGTGCCGCAAGTACCCGGTGGTGGTCATCAAAGACGTGCGGCTACTGGACCTGGGAGTGCTGGTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 72 bp | AAGCAGACGCATGGCAGGGGCGCAGGCGGTTTCCACTaGGCGCACCTGCTCTTGGCTCAGACGTTCGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: KQTHGRGAGGFH*AHLLLAQTFAP Trigger: TGGCGCGAACGTCTGAGCCAAGAGCAGGTGCGCCAAGTGGAAACCGCCTGCGCCCCTGCCATGCGTCTGCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS GCA 72 bp | CGCGAGTTGTGCACGGCCCGAGGGTCTCGGAAGAGTTaGACCACCTTTAGGTTGAGGCCTGGGTCACGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RELCTARGSRKS*TTFRLRPGSRS Trigger: GCTGCGTGACCCAGGCCTCAACCTAAAGGTGGTGCAACTCTTCCGAGACCCTCGGGCCGTGCACAACTCGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 72 bp | AGCAAAAGCGTGTACAGCGCCAAGAGCAGCGTGAACTaGCAATACTCTCGGCGCCGCCGCCGCCGGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SKSVYSAKSSVN*QYSRRRRRRPF Trigger: GAAGGGCCGGCGGCGGCGGCGCCGAGAGTATTGCAAGTTCACGCTGCTCTTGGCGCTGTACACGCTTTTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 72 bp | CGAGCCGGTGCGCCAGGTGGCATGCACATAGATGTGTaGCTTTTCCTGGGTCACCGCCTCACCGACGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: RAGAPGGMHIDV*LFLGHRLTDGA Trigger: AGCGCCGTCGGTGAGGCGGTGACCCAGGAAAAGCAACACATCTATGTGCATGCCACCTGGCGCACCGGCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 90 bp | CTCCACACACCCAAGCTGCGCTGCAGGCCGGGGCAGTTCCTGCCCTaGTCCTGCTCGCTGTGGCTGTCCAGTACAGAGGGGACAAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: LHTPKLRCRPGQFLP*SCSLWLSSTEGTRS Trigger: ACTTCTTGTCCCCTCTGTACTGGACAGCCACAGCGAGCAGGACAAGGGCAGGAACTGCCCCGGCCTGCAGCGCAGCTTGGGTGTGTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 90 bp | TTGTGCACGGCCCGAGGGTCTCGGAAGAGTTGCACCACCTTTAGGTaGAGGCCTGGGTCACGCAGCAGAGGGACCAGCACTCCCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LCTARGSRKSCTTFR*RPGSRSRGTSTPRS Trigger: GGACCTGGGAGTGCTGGTCCCTCTGCTGCGTGACCCAGGCCTCAACCTAAAGGTGGTGCAACTCTTCCGAGACCCTCGGGCCGTGCACAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 90 bp | CAAGAAGGACGAGCCGGTGCGCCAGGTGGCATGCACATAGATGTGTaGCTTTTCCTGGGTCACCGCCTCACCGACGGCGCTGAGGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: QEGRAGAPGGMHIDV*LFLGHRLTDGAEVA Trigger: GGCAACCTCAGCGCCGTCGGTGAGGCGGTGACCCAGGAAAAGCAACACATCTATGTGCATGCCACCTGGCGCACCGGCTCGTCCTTCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 90 bp | TGGATGCTTTCGCGCAGCAGTCCCTGCCTCGACTTGAGGCGCGAGTaGTGCACGGCCCGAGGGTCTCGGAAGAGTTGCACCACCTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: WMLSRSSPCLDLRRE*CTARGSRKSCTTFR Trigger: CCTAAAGGTGGTGCAACTCTTCCGAGACCCTCGGGCCGTGCACAACTCGCGCCTCAAGTCGAGGCAGGGACTGCTGCGCGAAAGCATCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS TCA 72 bp | GAAGTAGCAAAAGCGTGTACAGCGCCAAGAGCAGCGTaGACTTGCAATACTCTCGGCGCCGCCGCCGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: EVAKACTAPRAA*TCNTLGAAAAG Trigger: GCCGGCGGCGGCGGCGCCGAGAGTATTGCAAGTTCACGCTGCTCTTGGCGCTGTACACGCTTTTGCTACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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| CDS CAA 72 bp | GCCCGAGGGTCTCGGAAGAGTTGCACCACCTTTAGGTaGAGGCCTGGGTCACGCAGCAGAGGGACCAGCACT | + |
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Preference number: 6 (lower is better) Translates to: ARGSRKSCTTFR*RPGSRSRGTST Trigger: AGTGCTGGTCCCTCTGCTGCGTGACCCAGGCCTCAACCTAAAGGTGGTGCAACTCTTCCGAGACCCTCGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044138.8 |
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