Pregenerated sensors for CHST4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035930Ensembl transcript IDs: ENSMUST00000109222.4, ENSMUST00000211894.2, ENSMUST00000212934.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCACAGGTCAGCATCCTGAATGCCAGGAAAACACTGAGGAGAGATaGCATCCATACCAGACACGCCTTGAACTTGAGCTCTGCCCCTGT | + |
|
Preference number: 1 (lower is better) Translates to: STGQHPECQENTEER*HPYQTRLELELCPC Trigger: ACAGGGGCAGAGCTCAAGTTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTCAGGATGCTGACCTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR GCA 90 bp | AGGTTTACAGACACACTCCACAGATGCTGTTTGCTGTGTCCAGTATaGCTCCAGACCGTAGTCTCCAAGGTATGCACAGGTAAGAAGGCC | + |
|
Preference number: 1 (lower is better) Translates to: RFTDTLHRCCLLCPV*LQTVVSKVCTGKKA Trigger: GGCCTTCTTACCTGTGCATACCTTGGAGACTACGGTCTGGAGGCATACTGGACACAGCAAACAGCATCTGTGGAGTGTGTCTGTAAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR CCA 90 bp | CGCGTTTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTaGACAGGGAGGTTTACAGACACACTCCACAGATGCTGTTTGCTG | + |
|
Preference number: 1 (lower is better) Translates to: RVSLAFILPFLFGKM*TGRFTDTLHRCCLL Trigger: CAGCAAACAGCATCTGTGGAGTGTGTCTGTAAACCTCCCTGTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR GCA 90 bp | GAGGAGAGATGCCATCCATACCAGACACGCCTTGAACTTGAGCTCTaGCCCTGTTGTGTTGTTTGCTTCCTGTTTCTGATTACTGATAGT | + |
|
Preference number: 1 (lower is better) Translates to: EERCHPYQTRLELEL*PCCVVCFLFLITDS Trigger: ACTATCAGTAATCAGAAACAGGAAGCAAACAACACAACAGGGGCAGAGCTCAAGTTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR TCA 90 bp | TACAGACACACTCCACAGATGCTGTTTGCTGTGTCCAGTATGCCTCCAGACCGTCCCTCTGCTTGGGGCTaGGGAGAAAGGGGCACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: YRHTPQMLFAVSSMPPDRPSAWG*GERGTQ Trigger: CTGAGTGCCCCTTTCTCCTCAGCCCCAAGCAGAGGG...ACGGTCTGGAGGCATACTGGACACAGCAAACAGCATCTGTGGAGTGTGTCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTGAACTTGAGCCCTCTGCTTGGGGCTaGGGAGAAAGGGGCACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: QENTEERCHPYQTRLELEPSAWG*GERGTQ Trigger: CTGAGTGCCCCTTTCTCCTCAGCCCCAAGCAGAGGG...CTCAAGTTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR GCA 90 bp | GAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTGAAACCCACCCCCGCTCCTaGTTCCTCAAATCCTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: ECQENTEERCHPYQTRLETHPRS*FLKSSG Trigger: TCCAGAGGATTTGAGGAAGCAGGAGCGGGGGTGGGT...TTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR CAA 90 bp | AAGATGTGGACAGGGAGGTTTACAGACACACTCCACAGATGCTGTTaGCTGTGTCCAGTATGCCTCCAGACCGTAGTCTCCAAGGTATGC | + |
|
Preference number: 2 (lower is better) Translates to: KMWTGRFTDTLHRCC*LCPVCLQTVVSKVC Trigger: GCATACCTTGGAGACTACGGTCTGGAGGCATACTGGACACAGCAAACAGCATCTGTGGAGTGTGTCTGTAAACCTCCCTGTCCACATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTATCCTCTGGAAACTTTaGGGGTCTATGTCTCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: PECQENTEERCHPYQTRLILWKL*GSMSLW Trigger: CCACAGAGACATAGACCCTCAAAGTTTCCAGAGGAT...AAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCGCGTTTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTGGACTCCACAGATGCTGTTTaGTGTGTCCAGTATGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: EPRFLGFYSPLSLRKDVDSTDAV*CVQYAS Trigger: GGAGGCATACTGGACACAGCAAACAGCATCTGTGGA...GTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCCTGAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCCTCTTCGGAAAGATGTaGACAGGGAGGTTTACAGAC | + |
|
Preference number: 2 (lower is better) Translates to: ILNARKTLRRDAIHTRHALFGKM*TGRFTD Trigger: GTCTGTAAACCTCCCTGTCCACATCTTTCCGAAGAG...GGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTCAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR TCA 90 bp | AATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTGAACATCCTCTGGAAACTTTaGGGGTCTATGTCTCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: NARKTLRRDAIHTRHALNILWKL*GSMSLW Trigger: CCACAGAGACATAGACCCTCAAAGTTTCCAGAGGAT...GTTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR CAA 90 bp | GAAACTTTGAGGGTCTATGTCTCTGTGGAAGTTTCTGGGAGCTCTTaGGTAAGAGCCGCGTTTCCTTGGCTTTTATTCTCCCCTTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ETLRVYVSVEVSGSS*VRAAFPWLLFSPFS Trigger: AGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGCTCTTACCAAAGAGCTCCCAGAAACTTCCACAGAGACATAGACCCTCAAAGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTGGACAGGGAGGTTGACACACTCCACAGATaGTGTTTGCTGTGTCCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: FLGFYSPLSLRKDVDREVDTLHR*CLLCPV Trigger: TACTGGACACAGCAAACAGCATCTGTGGAGTGTGTC...AACCTCCCTGTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTGATTACTGATAGTGACAATGGGCAGAGATTCACAGATAAGCACCCACCCGTAGTCTCCAAGGTATaGACAGGTAAGAAGGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: FLITDSDNGQRFTDKHPPVVSKV*TGKKAK Trigger: CTTGGCCTTCTTACCTGTGCATACCTTGGAGACTAC...GGGTGGGTGCTTATCTGTGAATCTCTGCCCATTGTCACTATCAGTAATCAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTCTTCGGAAAGATGTGGACAGGGAGGTTTACAGACACACTCCACAGATGCAAGGGGCACTCAGTTTaGTTATACCTTAAGGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: FLFGKMWTGRFTDTLHRCKGHSV*LYLKAS Trigger: AGAAGCCTTAAGGTATAACCAAACTGAGTGCCCCTT...GCATCTGTGGAGTGTGTCTGTAAACCTCCCTGTCCACATCTTTCCGAAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTGAATTTGCTTCCTGTTTCTaGTTACTGATAGTGACAATG | + |
|
Preference number: 2 (lower is better) Translates to: ECQENTEERCHPYQTRLEFASCF*LLIVTM Trigger: CATTGTCACTATCAGTAATCAGAAACAGGAAGCAAA...TTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTGATTACTGATAGTGACAATGGGCAGAGATTCACAGATAAGCACCCACCCAAGGGGCACTCAGTTTaGTTATACCTTAAGGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: FLITDSDNGQRFTDKHPPKGHSV*LYLKAS Trigger: AGAAGCCTTAAGGTATAACCAAACTGAGTGCCCCTT...GGGTGGGTGCTTATCTGTGAATCTCTGCCCATTGTCACTATCAGTAATCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCCCTTTCTCTTCGGAAAGATGTGGACAGGGAGGTTTACAGACACACTCCAAAAGATACTGTTTCTTaGCTTTTTAGGCTCAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: SPLSLRKDVDREVYRHTPKDTVS*LFRLSC Trigger: ACAACTGAGCCTAAAAAGCCAAGAAACAGTATCTTT...TGGAGTGTGTCTGTAAACCTCCCTGTCCACATCTTTCCGAAGAGAAAGGGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTGATTACTGATAGTGACAATGGGCAGAGATTCACAGATAAGCACCCACCCAAAGATACTGTTTCTTaGCTTTTTAGGCTCAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: FLITDSDNGQRFTDKHPPKDTVS*LFRLSC Trigger: ACAACTGAGCCTAAAAAGCCAAGAAACAGTATCTTT...GGGTGGGTGCTTATCTGTGAATCTCTGCCCATTGTCACTATCAGTAATCAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTGAACAAAGACCCCTCTGCTaGGGGCTGAGGAGAAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ECQENTEERCHPYQTRLEQRPLC*GLRRKG Trigger: CCCCTTTCTCCTCAGCCCCAAGCAGAGGGGTCTTTG...TTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR GCA 72 bp | TTACTGCGGGGCCGTTCCACAGGTCAGCATCCTGAATaGCAGGAAAACACTGAGGAGAGATGCCATCCATAC | + |
|
Preference number: 3 (lower is better) Translates to: LLRGRSTGQHPE*QENTEERCHPY Trigger: GTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTCAGGATGCTGACCTGTGGAACGGCCCCGCAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR GCA 72 bp | GGCAGAGATTCACAGATAAGCACCCACCCCCGCTCCTaGTTCCTCAAATCCTCTGGAAACTTTGAGGGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GRDSQISTHPRS*FLKSSGNFEGL Trigger: TAGACCCTCAAAGTTTCCAGAGGATTTGAGGAAGCAGGAGCGGGGGTGGGTGCTTATCTGTGAATCTCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAACTTTGAGGGTCTATGTCTCTGTGGAAGTTTCTGGGAGCTCTTTGGTAAGACAAAGACCCCTCTGCTaGGGGCTGAGGAGAAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ETLRVYVSVEVSGSSLVRQRPLC*GLRRKG Trigger: CCCCTTTCTCCTCAGCCCCAAGCAGAGGGGTCTTTG...TCTTACCAAAGAGCTCCCAGAAACTTCCACAGAGACATAGACCCTCAAAGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR CCA 72 bp | GGAAACTTTGAGGGTCTATGTCTCTGTGGAAGTTTCTaGGAGCTCTTTGGTAAGAGCCGCGTTTCCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GNFEGLCLCGSF*ELFGKSRVSLA Trigger: AGCCAAGGAAACGCGGCTCTTACCAAAGAGCTCCCAGAAACTTCCACAGAGACATAGACCCTCAAAGTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTGAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCCCCCTGTTGTGTTGTTaGCTTCCTGTTTCTGATTAC | + |
|
Preference number: 3 (lower is better) Translates to: ILNARKTLRRDAIHTRHAPLLCC*LPVSDY Trigger: GTAATCAGAAACAGGAAGCAAACAACACAACAGGGG...GGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTCAGGAT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR GCA 72 bp | TGCCATCCATACCAGACACGCCTTGAACTTGAGCTCTaGCCCTGTTGTGTTGTTTGCTTCCTGTTTCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: CHPYQTRLELEL*PCCVVCFLFLI Trigger: AATCAGAAACAGGAAGCAAACAACACAACAGGGGCAGAGCTCAAGTTCAAGGCGTGTCTGGTATGGATGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTGAACAATCCTCTGGAAACTTaGAGGGTCTATGTCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: NARKTLRRDAIHTRHALNNPLET*RVYVSV Trigger: CACAGAGACATAGACCCTCAAAGTTTCCAGAGGATT...GTTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTGAACTTGAGCCCCTGTTGTGTTGTTaGCTTCCTGTTTCTGATTAC | + |
|
Preference number: 3 (lower is better) Translates to: QENTEERCHPYQTRLELEPLLCC*LPVSDY Trigger: GTAATCAGAAACAGGAAGCAAACAACACAACAGGGG...CTCAAGTTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR GCA 72 bp | CGCCTTGAACTTGAGCTCTGCCCCTGTTGTGTTGTTTaGTTCCTGTTTCTGATTACTGATAGTGACAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: RLELELCPCCVV*FLFLITDSDNG Trigger: CCCATTGTCACTATCAGTAATCAGAAACAGGAAGCAAACAACACAACAGGGGCAGAGCTCAAGTTCAAGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR CCA 72 bp | TTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTaGACAGGGAGGTTTACAGACACACTCCACAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: LAFILPFLFGKM*TGRFTDTLHRC Trigger: GCATCTGTGGAGTGTGTCTGTAAACCTCCCTGTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR CCA 72 bp | GTTTCTGGGAGCTCTTTGGTAAGAGCCGCGTTTCCTTaGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: VSGSSLVRAAFP*LLFSPFSSERC Trigger: ACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGCTCTTACCAAAGAGCTCCCAGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTGAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCGACCAACGCCACGCCTaGGAGACGTTGAGGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILNARKTLRRDAIHTRHADQRHA*ETLRAF Trigger: GAACGCCCTCAACGTCTCTCAGGCGTGGCGTTGGTC...GGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR GCA 90 bp | TACAGACACACTCCACAGATGCTGTTTGCTGTGTCCAGTATGCCTCCAGACCGTCACAGGGCCCGGCTTTaGTCCCACTGGAAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YRHTPQMLFAVSSMPPDRHRARL*SHWKRL Trigger: CAGCCTCTTCCAGTGGGAGCAAAGCCGGGCCCTGTG...ACGGTCTGGAGGCATACTGGACACAGCAAACAGCATCTGTGGAGTGTGTCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTGAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCCCCACTGGAAGAGGCTaGACTGTTTCCGGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILNARKTLRRDAIHTRHAPTGRG*TVSGGL Trigger: CAGGCCCCCGGAAACAGTCCAGCCTCTTCCAGTGGG...GGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTCAGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | GAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTGAAGACCAACGCCACGCCTaGGAGACGTTGAGGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ECQENTEERCHPYQTRLEDQRHA*ETLRAF Trigger: GAACGCCCTCAACGTCTCTCAGGCGTGGCGTTGGTC...TTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTGCAGCTGGAATCCCTTaGGGGTTGAGGGGTAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PECQENTEERCHPYQTRLAAGIP*GLRGKG Trigger: CCCCTTACCCCTCAACCCTCAAGGGATTCCAGCTGC...AAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211894.2 |
||
| CDS-3UTR GCA 90 bp | GTCTATGTCTCTGTGGAAGTTTCTGGGAGCTCTTTGGTAAGAGCCGCGTTTCCTGGGTCTCGGACCAGGTaGACGACGTGCAGGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYVSVEVSGSSLVRAAFPGSRTR*TTCRLR Trigger: CCTCAACCTGCACGTCGTGCACCTGGTCCGAGACCC...AGGAAACGCGGCTCTTACCAAAGAGCTCCCAGAAACTTCCACAGAGACATAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCTTTCTCTTCGGAAAGATGTGGACAGGGAGGTTTACAGACACACTCCACAGGGTCTCGGACCAGGTaGACGACGTGCAGGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFSSERCGQGGLQTHSTGSRTR*TTCRLR Trigger: CCTCAACCTGCACGTCGTGCACCTGGTCCGAGACCC...TGTGGAGTGTGTCTGTAAACCTCCCTGTCCACATCTTTCCGAAGAGAAAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR GCA 90 bp | GCCGCGTTTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTGGACAGACCAGGTGCACGACGTaGAGGTTGAGGGAAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAFPWLLFSPFSSERCGQTRCTT*RLREGS Trigger: GGACCCTTCCCTCAACCTGCACGTCGTGCACCTGGT...CTGTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR GCA 90 bp | AATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTGAACACAGCACCCCCGCCTTaGAAGACAGGCTCCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NARKTLRRDAIHTRHALNTAPPP*KTGSRR Trigger: CCTTCTGGAGCCTGTCTTGCAAGGCGGGGGTGCTGT...GTTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | GACAGGGAGGTTTACAGACACACTCCACAGATGCTGTTTGCTGTGTCCAGTATGGAATCCCTTGAGGGTTaGGGGGTAAGGGGTAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DREVYRHTPQMLFAVSSMESLEG*GVRGKG Trigger: CCCCTTACCCCTTACCCCTCAACCCTCAAGGGATTC...CATACTGGACACAGCAAACAGCATCTGTGGAGTGTGTCTGTAAACCTCCCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCGCGTTTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTGGACCTGGACTCCTCCCTCTaGGAAAGGTGTCTGTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: EPRFLGFYSPLSLRKDVDLDSSL*ERCLWT Trigger: CGTCCACAGACACCTTTCCCAGAGGGAGGAGTCCAG...GTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGGAGGTTTACAGACACACTCCACAGATGCTGTTTGCTGTGTCCAGTATGCTGGACTCCTCCCTCTaGGAAAGGTGTCTGTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: DREVYRHTPQMLFAVSSMLDSSL*ERCLWT Trigger: CGTCCACAGACACCTTTCCCAGAGGGAGGAGTCCAG...CATACTGGACACAGCAAACAGCATCTGTGGAGTGTGTCTGTAAACCTCCCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | GTCTATGTCTCTGTGGAAGTTTCTGGGAGCTCTTTGGTAAGAGCCGCGTTTCCTCCTCCAGGAAAGCTGTaGTACGGGCAGCTGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: VYVSVEVSGSSLVRAAFPPPGKL*YGQLES Trigger: GGATTCCAGCTGCCCGTACCACAGCTTTCCTGGAGG...AGGAAACGCGGCTCTTACCAAAGAGCTCCCAGAAACTTCCACAGAGACATAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211894.2 |
||
| 3UTR CAA 72 bp | ACAGGGAGGTTTACAGACACACTCCACAGATGCTGTTaGCTGTGTCCAGTATGCCTCCAGACCGTAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGRFTDTLHRCC*LCPVCLQTVVS Trigger: GGAGACTACGGTCTGGAGGCATACTGGACACAGCAAACAGCATCTGTGGAGTGTGTCTGTAAACCTCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | GAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTGAACACAAAAGAGGATCCTaGCCGCCAGGAAGACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ECQENTEERCHPYQTRLEHKRGS*PPGRQH Trigger: GTGCTGTCTTCCTGGCGGTCAGGATCCTCTTTTGTG...TTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCTTTCTCTTCGGAAAGATGTGGACAGGGAGGTTTACAGACACACTCCACACACAAAAGAGGATCCTaGCCGCCAGGAAGACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPFSSERCGQGGLQTHSTHKRGS*PPGRQH Trigger: GTGCTGTCTTCCTGGCGGTCAGGATCCTCTTTTGTG...TGTGGAGTGTGTCTGTAAACCTCCCTGTCCACATCTTTCCGAAGAGAAAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCCCTTTCTCTTCGGAAAGATGTGGACAGGGAGGTTTACAGACACACTCCAAGGCTGTGCTGCTGGTaGAAGTCATCCACACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPLSLRKDVDREVYRHTPRLCCW*KSSTHA Trigger: GGCATGTGTGGATGACTTTCACCAGCAGCACAGCCT...TGGAGTGTGTCTGTAAACCTCCCTGTCCACATCTTTCCGAAGAGAAAGGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | AATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTGAACATATCAAAGGGCTGCTaGCCGCAGAGCAGCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NARKTLRRDAIHTRHALNISKGC*PQSSLQ Trigger: CTGCAAGCTGCTCTGCGGTCAGCAGCCCTTTGATAT...GTTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | TACAGACACACTCCACAGATGCTGTTTGCTGTGTCCAGTATGCCTCCAGACCGTGGGTTTGGATGGCCTTaGCTATGTCCACCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YRHTPQMLFAVSSMPPDRGFGWP*LCPPGF Trigger: AAAGCCAGGTGGACATAGTCAAGGCCATCCAAACCC...ACGGTCTGGAGGCATACTGGACACAGCAAACAGCATCTGTGGAGTGTGTCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR GCA 90 bp | GAAACTTTGAGGGTCTATGTCTCTGTGGAAGTTTCTGGGAGCTCTTTGGTAAGACACAGGGCCCGGCTTTaGTCCCACTGGAAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETLRVYVSVEVSGSSLVRHRARL*SHWKRL Trigger: CAGCCTCTTCCAGTGGGAGCAAAGCCGGGCCCTGTG...TCTTACCAAAGAGCTCCCAGAAACTTCCACAGAGACATAGACCCTCAAAGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCGCGTTTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTGGACCAGAGCAGCTTGCAGTaGTTGGGTGAGCTGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EPRFLGFYSPLSLRKDVDQSSLQ*LGELIS Trigger: CGAGATCAGCTCACCCAAGCACTGCAAGCTGCTCTG...GTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGGAGGTTTACAGACACACTCCACAGATGCTGTTTGCTGTGTCCAGTATGCAGAGCAGCTTGCAGTaGTTGGGTGAGCTGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: DREVYRHTPQMLFAVSSMQSSLQ*LGELIS Trigger: CGAGATCAGCTCACCCAAGCACTGCAAGCTGCTCTG...CATACTGGACACAGCAAACAGCATCTGTGGAGTGTGTCTGTAAACCTCCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | AACTTTGAGGGTCTATGTCTCTGTGGAAGTTTCTGGGAGCTCTTTGGTAAGAGCCATGCACGGGCCTCCTaGACTCCTCCCTCTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLCLCGSFWELFGKSHARAS*TPPSGK Trigger: TTTCCCAGAGGGAGGAGTCCAGGAGGCCCGTGCATG...GCTCTTACCAAAGAGCTCCCAGAAACTTCCACAGAGACATAGACCCTCAAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | TACAGACACACTCCACAGATGCTGTTTGCTGTGTCCAGTATGCCTCCAGACCGTCTGTTTCCGGGGGCCTaGGTTCATGTAGGCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YRHTPQMLFAVSSMPPDRLFPGA*VHVGIK Trigger: TTTGATGCCTACATGAACCCAGGCCCCCGGAAACAG...ACGGTCTGGAGGCATACTGGACACAGCAAACAGCATCTGTGGAGTGTGTCTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGATTACTGATAGTGACAATGGGCAGAGATTCACAGATAAGCACCCACCCCCCACTGGAAGAGGCTaGACTGTTTCCGGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLITDSDNGQRFTDKHPPPTGRG*TVSGGL Trigger: CAGGCCCCCGGAAACAGTCCAGCCTCTTCCAGTGGG...GGGTGGGTGCTTATCTGTGAATCTCTGCCCATTGTCACTATCAGTAATCAGAAA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGGAGGTTTACAGACACACTCCACAGATGCTGTTTGCTGTGTCCAGTATGCGGCTTTGCTCCCACTaGAAGAGGCTGGACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DREVYRHTPQMLFAVSSMRLCSH*KRLDCF Trigger: GAAACAGTCCAGCCTCTTCCAGTGGGAGCAAAGCCG...CATACTGGACACAGCAAACAGCATCTGTGGAGTGTGTCTGTAAACCTCCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCTTTCTCTTCGGAAAGATGTGGACAGGGAGGTTTACAGACACACTCCACACGGCTTTGCTCCCACTaGAAGAGGCTGGACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPFSSERCGQGGLQTHSTRLCSH*KRLDCF Trigger: GAAACAGTCCAGCCTCTTCCAGTGGGAGCAAAGCCG...TGTGGAGTGTGTCTGTAAACCTCCCTGTCCACATCTTTCCGAAGAGAAAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGGGTCTATGTCTCTGTGGAAGTTTCTGGGAGCTCTTTGGTAAGAGCCGCGACCTGCCCCAAGATATaGGAGGAGGACAGAAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LRVYVSVEVSGSSLVRAATCPKI*EEDRRS Trigger: GGATCTTCTGTCCTCCTCCCATATCTTGGGGCAGGT...CGCGGCTCTTACCAAAGAGCTCCCAGAAACTTCCACAGAGACATAGACCCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTGAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCACCTGCCCCAAGATATaGGAGGAGGACAGAAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ILNARKTLRRDAIHTRHATCPKI*EEDRRS Trigger: GGATCTTCTGTCCTCCTCCCATATCTTGGGGCAGGT...GGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | GCCGCGTTTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTGGACAGGGGTTTGGATGGCCTTaGCTATGTCCACCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAFPWLLFSPFSSERCGQGFGWP*LCPPGF Trigger: AAAGCCAGGTGGACATAGTCAAGGCCATCCAAACCC...CTGTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | GCCGCGTTTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTGGACAGCCCTCTTCTTTATGTTaGAACAGCACCCCCGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAFPWLLFSPFSSERCGQPSSLC*NSTPAL Trigger: CAAGGCGGGGGTGCTGTTTCAACATAAAGAAGAGGG...CTGTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | GTTTGGTTATACCTTAAGGCTTCTGTGCGTTTAATGGTGACTAAGGCTGGAACCCATGCACGGGCCTCCTaGACTCCTCCCTCTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VWLYLKASVRLMVTKAGTHARAS*TPPSGK Trigger: TTTCCCAGAGGGAGGAGTCCAGGAGGCCCGTGCATG...GGTTCCAGCCTTAGTCACCATTAAACGCACAGAAGCCTTAAGGTATAACCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | AACTTTGAGGGTCTATGTCTCTGTGGAAGTTTCTGGGAGCTCTTTGGTAAGAGCAGGCTGTGCTGCTGGTaGAAGTCATCCACACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLCLCGSFWELFGKSRLCCW*KSSTHA Trigger: GGCATGTGTGGATGACTTTCACCAGCAGCACAGCCT...GCTCTTACCAAAGAGCTCCCAGAAACTTCCACAGAGACATAGACCCTCAAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR GCA 90 bp | GTTTGGTTATACCTTAAGGCTTCTGTGCGTTTAATGGTGACTAAGGCTGGAACCGGCTCCAGAAGGCTCTaGCTCCAGGAAAGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VWLYLKASVRLMVTKAGTGSRRL*LQESCG Trigger: ACCACAGCTTTCCTGGAGGCAGAGCCTTCTGGAGCC...GGTTCCAGCCTTAGTCACCATTAAACGCACAGAAGCCTTAAGGTATAACCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | AGACACACTCCACAGATGCTGTTTGCTGTGTCCAGTATGCCTCCAGACCGTAGTTGCCCTAGCACAATATaGCTGTCAACCATGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHTPQMLFAVSSMPPDRSCPSTI*LSTMSS Trigger: AGAACTCATGGTTGACAGTCATATTGTGCTAGGGCA...ACTACGGTCTGGAGGCATACTGGACACAGCAAACAGCATCTGTGGAGTGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTCCTGGCTTTTGCAGATaGTCTTCATGGCATAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PECQENTEERCHPYQTRLPGFCR*SSWHNR Trigger: CCTATTATGCCATGAAGATCATCTGCAAAAGCCAGG...AAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCTTTCTCTTCGGAAAGATGTGGACAGGGAGGTTTACAGACACACTCCACAGAGGAGGATGGCAGATaGTACTGGAATGTCTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPFSSERCGQGGLQTHSTEEDGR*YWNVYS Trigger: AGAGTAGACATTCCAGTATCATCTGCCATCCTCCTC...TGTGGAGTGTGTCTGTAAACCTCCCTGTCCACATCTTTCCGAAGAGAAAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCGCGTTTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTGGACTGCCCTAGCACAATATaGCTGTCAACCATGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EPRFLGFYSPLSLRKDVDCPSTI*LSTMSS Trigger: AGAACTCATGGTTGACAGTCATATTGTGCTAGGGCA...GTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCGCGTTTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTGGACTTGCCTTGTTCTTGTTaGGATCTGACCTGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: EPRFLGFYSPLSLRKDVDLPCSC*DLTWRY Trigger: ATACCTCCAGGTCAGATCTCAACAAGAACAAGGCAA...GTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | GAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTTGAATTGACTATGTCCACCTaGCTTTTGCAGATGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ECQENTEERCHPYQTRLELTMST*LLQMIF Trigger: GAAGATCATCTGCAAAAGCCAGGTGGACATAGTCAA...TTCAAGGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCGCGTTTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTGGACTTGACTATGTCCACCTaGCTTTTGCAGATGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPRFLGFYSPLSLRKDVDLTMST*LLQMIF Trigger: GAAGATCATCTGCAAAAGCCAGGTGGACATAGTCAA...GTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| 3UTR CAA 72 bp | AGTTTCTGGGAGCTCTTTGGTAAGAGCCGCGTTTCCTaGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SFWELFGKSRVS*AFILPFLFGKM Trigger: CATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGCTCTTACCAAAGAGCTCCCAGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | AACTTTGAGGGTCTATGTCTCTGTGGAAGTTTCTGGGAGCTCTTTGGTAAGAGCCCTGGCTTTTGCAGATaGTCTTCATGGCATAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLCLCGSFWELFGKSPGFCR*SSWHNR Trigger: CCTATTATGCCATGAAGATCATCTGCAAAAGCCAGG...GCTCTTACCAAAGAGCTCCCAGAAACTTCCACAGAGACATAGACCCTCAAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTGGACAGGGAGGTTTTGCCTTGTTCTTGTTaGGATCTGACCTGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FLGFYSPLSLRKDVDREVLPCSC*DLTWRY Trigger: ATACCTCCAGGTCAGATCTCAACAAGAACAAGGCAA...AACCTCCCTGTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS GCA 90 bp | GTTGAAACAGCACCCCCGCCTTGCAAGACAGGCTCCAGAAGGCTCTaGCTCCAGGAAAGCTGTGGTACGGGCAGCTGGAATCCCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VETAPPPCKTGSRRL*LQESCGTGSWNPLR Trigger: CCTCAAGGGATTCCAGCTGCCCGTACCACAGCTTTCCTGGAGGCAGAGCCTTCTGGAGCCTGTCTTGCAAGGCGGGGGTGCTGTTTCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211894.2 |
||
| CDS CCA 90 bp | GTAAGGGGTCGGGTGAAGGGTCAGGGTGAGGAGCCTCCCTGTAGGTaGGCTAAGCCGAGGAGGATGGCAGATGATACTGGAATGTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: VRGRVKGQGEEPPCR*AKPRRMADDTGMST Trigger: AGTAGACATTCCAGTATCATCTGCCATCCTCCTCGGCTTAGCCCACCTACAGGGAGGCTCCTCACCCTGACCCTTCACCCGACCCCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211894.2 |
||
| CDS CCA 90 bp | GAAGACAGCACCAGCACATGCACGGGCCTCCTGGACTCCTCCCTCTaGGAAAGGTGTCTGTGGACGGACATATGGATGAAGAGAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: EDSTSTCTGLLDSSL*ERCLWTDIWMKRAT Trigger: TGTAGCTCTCTTCATCCATATGTCCGTCCACAGACACCTTTCCCAGAGGGAGGAGTCCAGGAGGCCCGTGCATGTGCTGGTGCTGTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 ENSMUST00000212934.2 |
||
| CDS GCA 90 bp | CCTTCTGCTTGCCCTCTTCTTTATGTTGAAACAGCACCCCCGCCTTaGAAGACAGGCTCCAGAAGGCTCTGCCTCCAGGAAAGCTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSACPLLYVETAPPP*KTGSRRLCLQESCG Trigger: ACCACAGCTTTCCTGGAGGCAGAGCCTTCTGGAGCCTGTCTTGCAAGGCGGGGGTGCTGTTTCAACATAAAGAAGAGGGCAAGCAGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211894.2 |
||
| CDS CCA 90 bp | ACATGCACGGGCCTCCTGGACTCCTCCCTCTGGGAAAGGTGTCTGTaGACGGACATATGGATGAAGAGAGCTACAACGATGACCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TCTGLLDSSLWERCL*TDIWMKRATTMTWE Trigger: TTCCCAGGTCATCGTTGTAGCTCTCTTCATCCATATGTCCGTCCACAGACACCTTTCCCAGAGGGAGGAGTCCAGGAGGCCCGTGCATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 ENSMUST00000212934.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTGAATGCCAGGAAAACACTGAGGAGAGATGCCATCCATACCAGACACGCCTGCACGACGTGCAGGTaGAGGGAAGGGTCCGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ILNARKTLRRDAIHTRHACTTCR*REGSVS Trigger: ACTCACGGACCCTTCCCTCAACCTGCACGTCGTGCA...GGCGTGTCTGGTATGGATGGCATCTCTCCTCAGTGTTTTCCTGGCATTCAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS CCA 90 bp | CTCCTGGACTCCTCCCTCTGGGAAAGGTGTCTGTGGACGGACATATaGATGAAGAGAGCTACAACGATGACCTGGGAACCCAGGAACATC | + |
|
Preference number: 5 (lower is better) Translates to: LLDSSLWERCLWTDI*MKRATTMTWEPRNI Trigger: GATGTTCCTGGGTTCCCAGGTCATCGTTGTAGCTCTCTTCATCCATATGTCCGTCCACAGACACCTTTCCCAGAGGGAGGAGTCCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 ENSMUST00000212934.2 |
||
| CDS-3UTR CAA 90 bp | GTAAGAGCCGCGTTTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTTGCACGACGTGCAGGTaGAGGGAAGGGTCCGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VRAAFPWLLFSPFSSERCCTTCR*REGSVS Trigger: ACTCACGGACCCTTCCCTCAACCTGCACGTCGTGCA...ACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGCTCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS TCA 90 bp | TGGTCTTCCTCCTTGATCGTTTCCAAATGCTGCCCTAGCACAATATaGCTGTCAACCATGAGTTCTATGGTGGTGTGCTCCCGGGATCGG | + |
|
Preference number: 5 (lower is better) Translates to: WSSSLIVSKCCPSTI*LSTMSSMVVCSRDR Trigger: CCGATCCCGGGAGCACACCACCATAGAACTCATGGTTGACAGTCATATTGTGCTAGGGCAGCATTTGGAAACGATCAAGGAGGAAGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS GCA 90 bp | CAGCAGCCTCCCTTTCTTCAACAGCATCATCCTAACCCTTCTGCTTaGCCTCTTCTTTATGTTGAAACAGCACCCCCGCCTTGCAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: QQPPFLQQHHPNPSA*PLLYVETAPPPCKT Trigger: TGTCTTGCAAGGCGGGGGTGCTGTTTCAACATAAAGAAGAGGGCAAGCAGAAGGGTTAGGATGATGCTGTTGAAGAAAGGGAGGCTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211894.2 |
||
| CDS CCA 90 bp | TGTCTGTGGACGGACATATGGATGAAGAGAGCTACAACGATGACCTaGGAACCCAGGAACATCAGCAGCCTCCCTTTCTTCAACAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: CLWTDIWMKRATTMT*EPRNISSLPFFNSI Trigger: GATGCTGTTGAAGAAAGGGAGGCTGCTGATGTTCCTGGGTTCCCAGGTCATCGTTGTAGCTCTCTTCATCCATATGTCCGTCCACAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 ENSMUST00000212934.2 |
||
| CDS-3UTR CAA 90 bp | GCCGCGTTTCCTTGGCTTTTATTCTCCCCTTTCTCTTCGGAAAGATGTGGACAGCTCACCGCAGGCATCTaGAAGCTGGGAAACCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAFPWLLFSPFSSERCGQLTAGI*KLGNLF Trigger: GAAAAGGTTTCCCAGCTTCAAGATGCCTGCGGTGAG...CTGTCCACATCTTTCCGAAGAGAAAGGGGAGAATAAAAGCCAAGGAAACGCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS-3UTR CAA 90 bp | GAACTTGAGCTCTGCCCCTGTTGTGTTGTTTGCTTCCTGTTTCTGATTACTGATCTCACCGCAGGCATCTaGAAGCTGGGAAACCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELELCPCCVVCFLFLITDLTAGI*KLGNLF Trigger: GAAAAGGTTTCCCAGCTTCAAGATGCCTGCGGTGAG...ATCAGTAATCAGAAACAGGAAGCAAACAACACAACAGGGGCAGAGCTCAAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS CCA 72 bp | AGCACAGGGCCCGGCTTTGCTCCCACTGGAAGAGGCTaGACTGTTTCCGGGGGCCTGGGTTCATGTAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: STGPGFAPTGRG*TVSGGLGSCRH Trigger: ATGCCTACATGAACCCAGGCCCCCGGAAACAGTCCAGCCTCTTCCAGTGGGAGCAAAGCCGGGCCCTGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 ENSMUST00000212934.2 |
||
| CDS TCA 72 bp | GCTGACCGCAGAGCAGCTTGCAGTGCTTGGGTGAGCTaGTCTCGTGGGCAGGGAAGAAGTCACACACAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: ADRRAACSAWVS*SRGQGRSHTQA Trigger: CGCCTGTGTGTGACTTCTTCCCTGCCCACGAGATCAGCTCACCCAAGCACTGCAAGCTGCTCTGCGGTCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 ENSMUST00000212934.2 |
||
| CDS TCA 72 bp | GGGCTGCTGACCGCAGAGCAGCTTGCAGTGCTTGGGTaGGCTGATCTCGTGGGCAGGGAAGAAGTCACACAC | + |
|
Preference number: 6 (lower is better) Translates to: GLLTAEQLAVLG*ADLVGREEVTH Trigger: GTGTGTGACTTCTTCCCTGCCCACGAGATCAGCTCACCCAAGCACTGCAAGCTGCTCTGCGGTCAGCAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 ENSMUST00000212934.2 |
||
| CDS TCA 72 bp | GAGCGGCAGGCCTTCTCCACCATATCAAAGGGCTGCTaGCCGCAGAGCAGCTTGCAGTGCTTGGGTGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ERQAFSTISKGC*PQSSLQCLGEL Trigger: CAGCTCACCCAAGCACTGCAAGCTGCTCTGCGGTCAGCAGCCCTTTGATATGGTGGAGAAGGCCTGCCGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 ENSMUST00000212934.2 |
||
| CDS TCA 72 bp | TATGGAAGGCATGCTGACCCATGCCCTTGCCGCGGGTaGCATTGTAAACCCATGTTTGGAGGTGGGGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: YGRHADPCPCRG*HCKPMFGGGAK Trigger: TTTTGCCCCACCTCCAAACATGGGTTTACAATGTCACCCGCGGCAAGGGCATGGGTCAGCATGCCTTCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS CCA 72 bp | TCCTCCCTCTGGGAAAGGTGTCTGTGGACGGACATATaGATGAAGAGAGCTACAACGATGACCTGGGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLWERCLWTDI*MKRATTMTWEP Trigger: GGGTTCCCAGGTCATCGTTGTAGCTCTCTTCATCCATATGTCCGTCCACAGACACCTTTCCCAGAGGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 ENSMUST00000212934.2 |
||
| CDS CAA 72 bp | CGCTGCTGCAGAGCTTCAGGGAGGGTTTGGATGGCCTaGACTATGTCCACCTGGCTTTTGCAGATGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RCCRASGRVWMA*TMSTWLLQMIF Trigger: GAAGATCATCTGCAAAAGCCAGGTGGACATAGTCAAGGCCATCCAAACCCTCCCTGAAGCTCTGCAGCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS CCA 72 bp | AAATCCAACCCCACAAATTTATATAGTCTGGTCGTCTaGGCCAGGGGTGCCCGAACCAGGTCCTCATACCTC | + |
|
Preference number: 6 (lower is better) Translates to: KSNPTNLYSLVV*ARGARTRSSYL Trigger: GAGGTATGAGGACCTGGTTCGGGCACCCCTGGCCCAGACGACCAGACTATATAAATTTGTGGGGTTGGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS CAA 90 bp | ATGGGAGGAGGACAGAAGATCCAGGGACAGGTTGCCTTGTTCTTGTaGAGATCTGACCTGGAGGTATCCCAGCAAATCCATAGCCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: MGGGQKIQGQVALFL*RSDLEVSQQIHSLT Trigger: GGTGAGGCTATGGATTTGCTGGGATACCTCCAGGTCAGATCTCAACAAGAACAAGGCAACCTGTCCCTGGATCTTCTGTCCTCCTCCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS CAA 90 bp | GATATGGGAGGAGGACAGAAGATCCAGGGACAGGTTGCCTTGTTCTaGTTGAGATCTGACCTGGAGGTATCCCAGCAAATCCATAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DMGGGQKIQGQVALF*LRSDLEVSQQIHSL Trigger: GAGGCTATGGATTTGCTGGGATACCTCCAGGTCAGATCTCAACAAGAACAAGGCAACCTGTCCCTGGATCTTCTGTCCTCCTCCCATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS CAA 90 bp | CCCCAAGATATGGGAGGAGGACAGAAGATCCAGGGACAGGTTGCCTaGTTCTTGTTGAGATCTGACCTGGAGGTATCCCAGCAAATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PQDMGGGQKIQGQVA*FLLRSDLEVSQQIH Trigger: ATGGATTTGCTGGGATACCTCCAGGTCAGATCTCAACAAGAACAAGGCAACCTGTCCCTGGATCTTCTGTCCTCCTCCCATATCTTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS CAA 72 bp | GGAGGACAGAAGATCCAGGGACAGGTTGCCTTGTTCTaGTTGAGATCTGACCTGGAGGTATCCCAGCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: GGQKIQGQVALF*LRSDLEVSQQI Trigger: GATTTGCTGGGATACCTCCAGGTCAGATCTCAACAAGAACAAGGCAACCTGTCCCTGGATCTTCTGTCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS CAA 72 bp | ATCATCCTAACCCTTCTGCTTGCCCTCTTCTTTATGTaGAAACAGCACCCCCGCCTTGCAAGACAGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IILTLLLALFFM*KQHPRLARQAP Trigger: TGGAGCCTGTCTTGCAAGGCGGGGGTGCTGTTTCAACATAAAGAAGAGGGCAAGCAGAAGGGTTAGGATGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211894.2 |
||
| CDS CAA 72 bp | GGACAGAAGATCCAGGGACAGGTTGCCTTGTTCTTGTaGAGATCTGACCTGGAGGTATCCCAGCAAATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GQKIQGQVALFL*RSDLEVSQQIH Trigger: ATGGATTTGCTGGGATACCTCCAGGTCAGATCTCAACAAGAACAAGGCAACCTGTCCCTGGATCTTCTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||
| CDS TCA 72 bp | TCCTTGATCGTTTCCAAATGCTGCCCTAGCACAATATaGCTGTCAACCATGAGTTCTATGGTGGTGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLIVSKCCPSTI*LSTMSSMVVCS Trigger: GGAGCACACCACCATAGAACTCATGGTTGACAGTCATATTGTGCTAGGGCAGCATTTGGAAACGATCAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109222.4 ENSMUST00000211894.2 |
||