Pregenerated sensors for CHST13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056643Ensembl transcript IDs: ENSMUST00000070890.6
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCGGAATGAGTGTGACCAGTGGCCAGACTCTTGGTCAGGCCCACTaGATAAGGTCTCCAATCCACACAACCAGGTTCGTTCCAGACCTC | + |
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Preference number: 1 (lower is better) Translates to: VGMSVTSGQTLGQAH*IRSPIHTTRFVPDL Trigger: GAGGTCTGGAACGAACCTGGTTGTGTGGATTGGAGACCTTATCCAGTGGGCCTGACCAAGAGTCTGGCCACTGGTCACACTCATTCCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR CCA 90 bp | TGTACCCTACCCAGTCGGAATGAGTGTGACCAGTGGCCAGACTCTTaGTCAGGCCCACTGGATAAGGTCTCCAATCCACACAACCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: CTLPSRNECDQWPDS*SGPLDKVSNPHNQV Trigger: AACCTGGTTGTGTGGATTGGAGACCTTATCCAGTGGGCCTGACCAAGAGTCTGGCCACTGGTCACACTCATTCCGACTGGGTAGGGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR CCA 90 bp | AGACTGAGAAATGGCCTCTCAAACCAAACCAAAGAACTACAAACCTaGAGTCCTAGGAAGAAGCCTGACATCTGCAGAGTGGGAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: RLRNGLSNQTKELQT*SPRKKPDICRVGGR Trigger: TCTTCCTCCCACTCTGCAGATGTCAGGCTTCTTCCTAGGACTCCAGGTTTGTAGTTCTTTGGTTTGGTTTGAGAGGCCATTTCTCAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGAAGATCCAGCCTCTTGCAAGGCTGAGATCAAAGGTAGATCAGCCAGGTGGTCACAGCAGCCACTaGCTCTATTGCACCCAACAC | + |
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Preference number: 2 (lower is better) Translates to: QGKIQPLARLRSKVDQPGGHSSH*LYCTQH Trigger: GTGTTGGGTGCAATAGAGCCAGTGGCTGCTGTGACC...ACCTGGCTGATCTACCTTTGATCTCAGCCTTGCAAGAGGCTGGATCTTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR-3UTR CCA 90 bp | TGGAAAAGCTGCCACAGTATTGCATCTTGGCCTTTGCTGACACAGGGGAAGATCTCGTTCCAGACCTCCTaGTGGCCTCCTGGTCACAGC | + |
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Preference number: 2 (lower is better) Translates to: WKSCHSIASWPLLTQGKISFQTS*WPPGHS Trigger: GCTGTGACCAGGAGGCCACCAGGAGGTCTGGAACGA...GATCTTCCCCTGTGTCAGCAAAGGCCAAGATGCAATACTGTGGCAGCTTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAGACACACATCAAACTAACAGCAGAAACGGCCTGACAAGGTTATGGTCACTCCTGGTGGCCTCCTaGTCACAGCAGCCACTGGCT | + |
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Preference number: 2 (lower is better) Translates to: GRDTHQTNSRNGLTRLWSLLVAS*SQQPLA Trigger: AGCCAGTGGCTGCTGTGACCAGGAGGCCACCAGGAG...TGACCATAACCTTGTCAGGCCGTTTCTGCTGTTAGTTTGATGTGTGTCTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR-3UTR CCA 90 bp | ACTGAACCAAGCCATGACATTCTGTCTTGTAGCACCATGCCACGGACAGGTTCTGGCCTGACAAGGTTATaGTCACCTAAAGCAACCTGT | + |
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Preference number: 2 (lower is better) Translates to: TEPSHDILSCSTMPRTGSGLTRL*SPKATC Trigger: ACAGGTTGCTTTAGGTGACCATAACCTTGTCAGGCC...AGAACCTGTCCGTGGCATGGTGCTACAAGACAGAATGTCATGGCTTGGTTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGTAAATGCTGACAAGACCTTAGGCCACACTGAACCAAGCCATGACATTCTGGACAAGACTGAGAAATaGCCTCTCAAACCAAACCAA | + |
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Preference number: 2 (lower is better) Translates to: AVNADKTLGHTEPSHDILDKTEK*PLKPNQ Trigger: TTGGTTTGGTTTGAGAGGCCATTTCTCAGTCTTGTC...CAGAATGTCATGGCTTGGTTCAGTGTGGCCTAAGGTCTTGTCAGCATTTACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR CCA 72 bp | ACAACCAGGTTCGTTCCAGACCTCCTGGTGGCCTCCTaGTCACAGCAGCCACTGGCTCTATTGCACCCAACA | + |
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Preference number: 3 (lower is better) Translates to: TTRFVPDLLVAS*SQQPLALLHPT Trigger: TGTTGGGTGCAATAGAGCCAGTGGCTGCTGTGACCAGGAGGCCACCAGGAGGTCTGGAACGAACCTGGTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR CCA 72 bp | CAATCCACACAACCAGGTTCGTTCCAGACCTCCTGGTaGCCTCCTGGTCACAGCAGCCACTGGCTCTATTGC | + |
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Preference number: 3 (lower is better) Translates to: QSTQPGSFQTSW*PPGHSSHWLYC Trigger: GCAATAGAGCCAGTGGCTGCTGTGACCAGGAGGCCACCAGGAGGTCTGGAACGAACCTGGTTGTGTGGATTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR CCA 72 bp | CTCCAATCCACACAACCAGGTTCGTTCCAGACCTCCTaGTGGCCTCCTGGTCACAGCAGCCACTGGCTCTAT | + |
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Preference number: 3 (lower is better) Translates to: LQSTQPGSFQTS*WPPGHSSHWLY Trigger: ATAGAGCCAGTGGCTGCTGTGACCAGGAGGCCACCAGGAGGTCTGGAACGAACCTGGTTGTGTGGATTGGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR TCA 72 bp | CCAGGTAGATGTGGAGTGGTAGTGCTCACCATCCTGTaGCTGCTGGGGTGGCAGGCAGCTCATGTTAACTCC | + |
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Preference number: 3 (lower is better) Translates to: PGRCGVVVLTIL*LLGWQAAHVNS Trigger: GGAGTTAACATGAGCTGCCTGCCACCCCAGCAGTCACAGGATGGTGAGCACTACCACTCCACATCTACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR CCA 72 bp | CCCAGTCGGAATGAGTGTGACCAGTGGCCAGACTCTTaGTCAGGCCCACTGGATAAGGTCTCCAATCCACAC | + |
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Preference number: 3 (lower is better) Translates to: PSRNECDQWPDS*SGPLDKVSNPH Trigger: GTGTGGATTGGAGACCTTATCCAGTGGGCCTGACCAAGAGTCTGGCCACTGGTCACACTCATTCCGACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR CCA 72 bp | AGTGTGACCAGTGGCCAGACTCTTGGTCAGGCCCACTaGATAAGGTCTCCAATCCACACAACCAGGTTCGTT | + |
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Preference number: 3 (lower is better) Translates to: SVTSGQTLGQAH*IRSPIHTTRFV Trigger: AACGAACCTGGTTGTGTGGATTGGAGACCTTATCCAGTGGGCCTGACCAAGAGTCTGGCCACTGGTCACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR CCA 72 bp | AAAGTGAGCTGGAAAAGCTGCCACAGTATTGCATCTTaGCCTTTGCTGACACAGGGGAAGATCCAGCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: KVSWKSCHSIAS*PLLTQGKIQPL Trigger: AAGAGGCTGGATCTTCCCCTGTGTCAGCAAAGGCCAAGATGCAATACTGTGGCAGCTTTTCCAGCTCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR TCA 72 bp | GCACCATGCCACGGACAGGTTCTACACAGACAAGACTaGGAAATGGCCTCTCAAACCAAACCAAAGAACTAC | + |
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Preference number: 3 (lower is better) Translates to: APCHGQVLHRQD*EMASQTKPKNY Trigger: GTAGTTCTTTGGTTTGGTTTGAGAGGCCATTTCTCAGTCTTGTCTGTGTAGAACCTGTCCGTGGCATGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR TCA 72 bp | GAAGAGACACACATCAAACTAACAGCAGAAACGGCCTaGCAAGGTTATGGTCACCTAAAGCAACCTGTACCC | + |
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Preference number: 3 (lower is better) Translates to: EETHIKLTAETA*QGYGHLKQPVP Trigger: GGGTACAGGTTGCTTTAGGTGACCATAACCTTGTCAGGCCGTTTCTGCTGTTAGTTTGATGTGTGTCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR CCA 72 bp | AATGGCCTCTCAAACCAAACCAAAGAACTACAAACCTaGAGTCCTAGGAAGAAGCCTGACATCTGCAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: NGLSNQTKELQT*SPRKKPDICRV Trigger: CACTCTGCAGATGTCAGGCTTCTTCCTAGGACTCCAGGTTTGTAGTTCTTTGGTTTGGTTTGAGAGGCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR CCA 72 bp | GCCACGGACAGGTTCTACACAGACAAGACTGAGAAATaGCCTCTCAAACCAAACCAAAGAACTACAAACCTG | + |
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Preference number: 3 (lower is better) Translates to: ATDRFYTDKTEK*PLKPNQRTTNL Trigger: CAGGTTTGTAGTTCTTTGGTTTGGTTTGAGAGGCCATTTCTCAGTCTTGTCTGTGTAGAACCTGTCCGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS-3UTR GCA 90 bp | GTCGGAATGAGTGTGACCAGTGGCCAGACTCTTGGTCAGGCCCACTGGATAAGGGTCGCGTGTGGCGGCTaGAGGCCCGGCGCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VGMSVTSGQTLGQAHWIRVACGG*RPGAAA Trigger: AGCTGCTGCGCCGGGCCTGCAGCCGCCACACGCGAC...CCTTATCCAGTGGGCCTGACCAAGAGTCTGGCCACTGGTCACACTCATTCCGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS-3UTR CCA 90 bp | ACAACCAGGTTCGTTCCAGACCTCCTGGTGGCCTCCTGGTCACAGCAGCCACTGGAAGGCCGCGCTGTGTaGCCGCGCCAGCTTGTTGCG | + |
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Preference number: 4 (lower is better) Translates to: TTRFVPDLLVASWSQQPLEGRAV*PRQLVA Trigger: CGCAACAAGCTGGCGCGGCCACACAGCGCGGCCTTC...CAGTGGCTGCTGTGACCAGGAGGCCACCAGGAGGTCTGGAACGAACCTGGTTGT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS-3UTR GCA 90 bp | ACAACCAGGTTCGTTCCAGACCTCCTGGTGGCCTCCTGGTCACAGCAGCCACTGTGCAGCACCCAGACTTaGCACCACCGGCAAGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: TTRFVPDLLVASWSQQPLCSTQT*HHRQGP Trigger: CGGCCCTTGCCGGTGGTGGCAAGTCTGGGTGCTGCA...CAGTGGCTGCTGTGACCAGGAGGCCACCAGGAGGTCTGGAACGAACCTGGTTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS-3UTR TCA 90 bp | TGGAAAAGCTGCCACAGTATTGCATCTTGGCCTTTGCTGACACAGGGGAAGATCCTTGTTGCGGTAGGCTaGCGCCAGGCGCTCGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: WKSCHSIASWPLLTQGKILVAVG*RQALEG Trigger: CCCTTCGAGCGCCTGGCGTCAGCCTACCGCAACAAG...GATCTTCCCCTGTGTCAGCAAAGGCCAAGATGCAATACTGTGGCAGCTTTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS-3UTR GCA 90 bp | ACACTGAACCAAGCCATGACATTCTGTCTTGTAGCACCATGCCACGGACAGGTTCAGTACAGCAGCCGGTaGGCGTCGTCCACCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: TLNQAMTFCLVAPCHGQVQYSSR*ASSTST Trigger: CGTGCTGGTGGACGACGCGCACCGGCTGCTGTACTG...AACCTGTCCGTGGCATGGTGCTACAAGACAGAATGTCATGGCTTGGTTCAGTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS-3UTR GCA 90 bp | CAGGGGAAGATCCAGCCTCTTGCAAGGCTGAGATCAAAGGTAGATCAGCCAGGTATGGCACAGCGCGTGTaGGCGCTCCCAGTGTTCGTT | + |
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Preference number: 4 (lower is better) Translates to: QGKIQPLARLRSKVDQPGMAQRV*ALPVFV Trigger: AACGAACACTGGGAGCGCGCACACGCGCTGTGCCAT...ACCTGGCTGATCTACCTTTGATCTCAGCCTTGCAAGAGGCTGGATCTTCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS-3UTR TCA 90 bp | GGAAGAGACACACATCAAACTAACAGCAGAAACGGCCTGACAAGGTTATGGTCATCGTTGAAGGGCTCATaGCGGCGCGTGCGCGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: GRDTHQTNSRNGLTRLWSSLKGS*RRVRGS Trigger: CGACCCGCGCACGCGCCGTCATGAGCCCTTCAACGA...TGACCATAACCTTGTCAGGCCGTTTCTGCTGTTAGTTTGATGTGTGTCTCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS-3UTR GCA 90 bp | GTACCCTACCCAGTCGGAATGAGTGTGACCAGTGGCCAGACTCTTGGTCAGGCCAGCTTTATTTTCAAATaGGGGACGCAGGGCGCACAG | + |
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Preference number: 4 (lower is better) Translates to: VPYPVGMSVTSGQTLGQASFIFK*GTQGAQ Trigger: CTGTGCGCCCTGCGTCCCGCATTTGAAAATAAAGCT...GGCCTGACCAAGAGTCTGGCCACTGGTCACACTCATTCCGACTGGGTAGGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS-3UTR CCA 90 bp | TATTGCATCTTGGCCTTTGCTGACACAGGGGAAGATCCAGCCTCTTGCAAGGCTCGTAAGGTCCTTCTCTaGCCTCAGCGGTGGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: YCILAFADTGEDPASCKARKVLL*PQRWSR Trigger: CCTGCTCCACCGCTGAGGCCAGAGAAGGACCTTACG...AGCCTTGCAAGAGGCTGGATCTTCCCCTGTGTCAGCAAAGGCCAAGATGCAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS-3UTR GCA 90 bp | AATGCTGACAAGACCTTAGGCCACACTGAACCAAGCCATGACATTCTGTCTTGTCTCGTGCGCAGGGATTaGGCTTGGATCCCCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: NADKTLGHTEPSHDILSCLVRRD*AWIPTA Trigger: GGCCGTGGGGATCCAAGCGCAATCCCTGCGCACGAG...ACAAGACAGAATGTCATGGCTTGGTTCAGTGTGGCCTAAGGTCTTGTCAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| 3UTR CAA 72 bp | AGCTGGAAAAGCTGCCACAGTATTGCATCTTGGCCTTaGCTGACACAGGGGAAGATCCAGCCTCTTGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SWKSCHSIASWP*LTQGKIQPLAR Trigger: CCTTGCAAGAGGCTGGATCTTCCCCTGTGTCAGCAAAGGCCAAGATGCAATACTGTGGCAGCTTTTCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS-3UTR CCA 90 bp | GACACACATCAAACTAACAGCAGAAACGGCCTGACAAGGTTATGGTCACCTAAAAAGGGGCTGATGTCCTaGAAAAGGCGCCGGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: DTHQTNSRNGLTRLWSPKKGLMS*KRRRAC Trigger: GCAGGCCCGGCGCCTTTTCCAGGACATCAGCCCCTT...TTTAGGTGACCATAACCTTGTCAGGCCGTTTCTGCTGTTAGTTTGATGTGTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS GCA 90 bp | TCAGCCGGCGCAAAGTCGGCCAGCGAGGGCAGCAGGCCAGGCGCATaGGCCTCGTGCGCAGGGATTGCGCTTGGATCCCCACGGCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: SAGAKSASEGSRPGA*ASCAGIALGSPRPR Trigger: GCGCGGCCGTGGGGATCCAAGCGCAATCCCTGCGCACGAGGCGCATGCGCCTGGCCTGCTGCCCTCGCTGGCCGACTTTGCGCCGGCTGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS GCA 90 bp | GCAAAGTCGGCCAGCGAGGGCAGCAGGCCAGGCGCATGCGCCTCGTaGGCAGGGATTGCGCTTGGATCCCCACGGCCGCGCAACGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: AKSASEGSRPGACAS*AGIALGSPRPRNAS Trigger: GCTGGCGTTGCGCGGCCGTGGGGATCCAAGCGCAATCCCTGCGCACGAGGCGCATGCGCCTGGCCTGCTGCCCTCGCTGGCCGACTTTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS CCA 90 bp | GGGCAGCAGGCCAGGCGCATGCGCCTCGTGCGCAGGGATTGCGCTTaGATCCCCACGGCCGCGCAACGCCAGCATCACACGCTTCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: GQQARRMRLVRRDCA*IPTAAQRQHHTLPV Trigger: AACTGGAAGCGTGTGATGCTGGCGTTGCGCGGCCGTGGGGATCCAAGCGCAATCCCTGCGCACGAGGCGCATGCGCCTGGCCTGCTGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS TCA 90 bp | GCTCCCGCACGAAGAGAAAGGTCAGGTAGTCGCGCAGCCGCCAGTTaGCCTCAGCCGGCGCAAAGTCGGCCAGCGAGGGCAGCAGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: APARRERSGSRAAAS*PQPAQSRPARAAGQ Trigger: CTGGCCTGCTGCCCTCGCTGGCCGACTTTGCGCCGGCTGAGGTCAACTGGCGGCTGCGCGACTACCTGACCTTTCTCTTCGTGCGGGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS GCA 90 bp | CCTCACTCCACCGAACCAGCTGGAGCCCAGAGCTTTATTTTCAAATaGGGGACGCAGGGCGCACAGGAGCAGGAGTGCAGCACCCAGACT | + |
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Preference number: 5 (lower is better) Translates to: PHSTEPAGAQSFIFK*GTQGAQEQECSTQT Trigger: AGTCTGGGTGCTGCACTCCTGCTCCTGTGCGCCCTGCGTCCCGCATTTGAAAATAAAGCTCTGGGCTCCAGCTGGTTCGGTGGAGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS GCA 90 bp | CCAGGTCCAGCACGAAGGCAGCATCATCTGCTATCGTCTCAAACTTaGCCACTACATCATAGCGCACTAGGCACGGATGGCACAGCGCGT | + |
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Preference number: 5 (lower is better) Translates to: PGPARRQHHLLSSQT*PLHHSALGTDGTAR Trigger: ACGCGCTGTGCCATCCGTGCCTAGTGCGCTATGATGTAGTGGGCAAGTTTGAGACGATAGCAGATGATGCTGCCTTCGTGCTGGACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS GCA 72 bp | CCGGCTGCAGCAGGCGTTGGCGTCGCGTGTGGCGGCTaGAGGCCCGGCGCAGCAGCTCACGCCGCTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: PAAAGVGVACGG*RPGAAAHAAAG Trigger: ACCAGCAGCGGCGTGAGCTGCTGCGCCGGGCCTGCAGCCGCCACACGCGACGCCAACGCCTGCTGCAGCCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS CCA 72 bp | AGGTCCTCCGGCTGCAGCAGGCGTTGGCGTCGCGTGTaGCGGCTGCAGGCCCGGCGCAGCAGCTCACGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RSSGCSRRWRRV*RLQARRSSSRR Trigger: GCGGCGTGAGCTGCTGCGCCGGGCCTGCAGCCGCCACACGCGACGCCAACGCCTGCTGCAGCCGGAGGACCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS GCA 72 bp | CAGCAGGCCAGGCGCATGCGCCTCGTGCGCAGGGATTaGGCTTGGATCCCCACGGCCGCGCAACGCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: QQARRMRLVRRD*AWIPTAAQRQH Trigger: ATGCTGGCGTTGCGCGGCCGTGGGGATCCAAGCGCAATCCCTGCGCACGAGGCGCATGCGCCTGGCCTGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS GCA 72 bp | CAGGGCGCACAGGAGCAGGAGTGCAGCACCCAGACTTaGCACCACCGGCAAGGGCCGCCTGCAACAGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: QGAQEQECSTQT*HHRQGPPATGA Trigger: CGCTCCTGTTGCAGGCGGCCCTTGCCGGTGGTGGCAAGTCTGGGTGCTGCACTCCTGCTCCTGTGCGCCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS GCA 72 bp | GCAAAGTCGGCCAGCGAGGGCAGCAGGCCAGGCGCATaGGCCTCGTGCGCAGGGATTGCGCTTGGATCCCCA | + |
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Preference number: 6 (lower is better) Translates to: AKSASEGSRPGA*ASCAGIALGSP Trigger: TGGGGATCCAAGCGCAATCCCTGCGCACGAGGCGCATGCGCCTGGCCTGCTGCCCTCGCTGGCCGACTTTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS CAA 72 bp | GCAGGGCGCACAGGAGCAGGAGTGCAGCACCCAGACTaGCCACCACCGGCAAGGGCCGCCTGCAACAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: AGRTGAGVQHPD*PPPARAACNRS Trigger: GCTCCTGTTGCAGGCGGCCCTTGCCGGTGGTGGCAAGTCTGGGTGCTGCACTCCTGCTCCTGTGCGCCCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS TCA 72 bp | GATGGCACAGCGCGTGTGCGCGCTCCCAGTGTTCGTTaGAGGGCTCATGACGGCGCGTGCGCGGGTCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: DGTARVRAPSVR*RAHDGACAGRA Trigger: TGCTCGACCCGCGCACGCGCCGTCATGAGCCCTTCAACGAACACTGGGAGCGCGCACACGCGCTGTGCCATC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS GCA 72 bp | TTCAAATGCGGGACGCAGGGCGCACAGGAGCAGGAGTaGAGCACCCAGACTTGCCACCACCGGCAAGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: FKCGTQGAQEQE*STQTCHHRQGP Trigger: CGGCCCTTGCCGGTGGTGGCAAGTCTGGGTGCTGCACTCCTGCTCCTGTGCGCCCTGCGTCCCGCATTTGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS TCA 72 bp | CGAAGAGAAAGGTCAGGTAGTCGCGCAGCCGCCAGTTaGCCTCAGCCGGCGCAAAGTCGGCCAGCGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RRERSGSRAAAS*PQPAQSRPARA Trigger: TGCCCTCGCTGGCCGACTTTGCGCCGGCTGAGGTCAACTGGCGGCTGCGCGACTACCTGACCTTTCTCTTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS CCA 72 bp | GCTGTAGGGGACTCTTCCTCACTCCACCGAACCAGCTaGAGCCCAGAGCTTTATTTTCAAATGCGGGACGCA | + |
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Preference number: 6 (lower is better) Translates to: AVGDSSSLHRTS*SPELYFQMRDA Trigger: TGCGTCCCGCATTTGAAAATAAAGCTCTGGGCTCCAGCTGGTTCGGTGGAGTGAGGAAGAGTCCCCTACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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| CDS GCA 72 bp | CTCACCCACCAGGTCCAGCACGAAGGCAGCATCATCTaGTATCGTCTCAAACTTGCCCACTACATCATAGCG | + |
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Preference number: 6 (lower is better) Translates to: LTHQVQHEGSII*YRLKLAHYIIA Trigger: CGCTATGATGTAGTGGGCAAGTTTGAGACGATAGCAGATGATGCTGCCTTCGTGCTGGACCTGGTGGGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070890.6 |
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