Pregenerated sensors for CHST12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036599Ensembl transcript IDs: ENSMUST00000043050.9, ENSMUST00000124142.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAACCCAGGAGGCCACAGGGTCCCATCCTCAAAGGACGGCCTCATaGGACAGCCATTCAATTTGTTGGGGGCAGCGTGAGGGCTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: RTQEATGSHPQRTAS*DSHSICWGQREGFW Trigger: CCAGAAGCCCTCACGCTGCCCCCAACAAATTGAATGGCTGTCCCATGAGGCCGTCCTTTGAGGATGGGACCCTGTGGCCTCCTGGGTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR CCA 90 bp | GTGCTTGGGTCTTGGCTGTACCACGGTCTCCAGATGCGAGAGGCGTaGAATCCTCTGCCTGTCACACCAGGAAGCAAAGGAAGCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: VLGSWLYHGLQMREA*NPLPVTPGSKGSQE Trigger: CTCCTGGCTTCCTTTGCTTCCTGGTGTGACAGGCAGAGGATTCCACGCCTCTCGCATCTGGAGACCGTGGTACAGCCAAGACCCAAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR TCA 90 bp | GCTATTCCATCAGCCCTGGCTCCCTTCCTGTGTACCATTCTTGCCTaGCTGACCCAAAGAACCACAGGAATGCCAGGGTGCGGGTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: AIPSALAPFLCTILA*LTQRTTGMPGCGCH Trigger: GTGGCACCCGCACCCTGGCATTCCTGTGGTTCTTTGGGTCAGTCAGGCAAGAATGGTACACAGGAAGGGAGCCAGGGCTGATGGAATAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR GCA 90 bp | TGGAGAGTGAGGTGCTTGGGTCTTGGCTGTACCACGGTCTCCAGATaGGAGAGGCGTGGAATCCTCTGCCTGTCACACCAGGAAGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: WRVRCLGLGCTTVSR*ERRGILCLSHQEAK Trigger: CTTTGCTTCCTGGTGTGACAGGCAGAGGATTCCACGCCTCTCGCATCTGGAGACCGTGGTACAGCCAAGACCCAAGCACCTCACTCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR TCA 90 bp | TTCCATCAGCCCTGGCTCCCTTCCTGTGTACCATTCTTGCCTGACTaGCCCAAAGAACCACAGGAATGCCAGGGTGCGGGTGCCACACTT | + |
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Preference number: 1 (lower is better) Translates to: FHQPWLPSCVPFLPD*PKEPQECQGAGATL Trigger: AAGTGTGGCACCCGCACCCTGGCATTCCTGTGGTTCTTTGGGTCAGTCAGGCAAGAATGGTACACAGGAAGGGAGCCAGGGCTGATGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR GCA 90 bp | CTTGGCTATTCCATCAGCCCTGGCTCCCTTCCTGTGTACCATTCTTaGCTGACTGACCCAAAGAACCACAGGAATGCCAGGGTGCGGGTG | + |
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Preference number: 1 (lower is better) Translates to: LGYSISPGSLPVYHS*LTDPKNHRNARVRV Trigger: CACCCGCACCCTGGCATTCCTGTGGTTCTTTGGGTCAGTCAGGCAAGAATGGTACACAGGAAGGGAGCCAGGGCTGATGGAATAGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR-3UTR CCA 90 bp | TCCAGATGCGAGAGGCGTGGAATCCTCTGCCTGTCACACCAGGAAGCAAAGGAAAGCCATTCAATTTGTTaGGGGCAGCGTGAGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SRCERRGILCLSHQEAKESHSIC*GQREGF Trigger: GAAGCCCTCACGCTGCCCCCAACAAATTGAATGGCT...TTCCTTTGCTTCCTGGTGTGACAGGCAGAGGATTCCACGCCTCTCGCATCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR-3UTR CCA 90 bp | TTTTTAAAGCCCATGATGGCTGGGCTGGGTAGTTTGGGTTCTTGGGGGACTAGGGGGAGCGCAAAACTCTaGAGAGTGAGGTGCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: FLKPMMAGLGSLGSWGTRGSAKL*RVRCLG Trigger: ACCCAAGCACCTCACTCTCCAGAGTTTTGCGCTCCC...CCTAGTCCCCCAAGAACCCAAACTACCCAGCCCAGCCATCATGGGCTTTAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR CAA 90 bp | ACCCAGCCAGCTTCAAATTTAGGCTCTTCTCCAGTGAAGACACTTTaGAGATGTTCCACCTCCGGGCGAGGTGTGAGACTTGGCTATTCC | + |
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Preference number: 2 (lower is better) Translates to: TQPASNLGSSPVKTL*RCSTSGRGVRLGYS Trigger: GGAATAGCCAAGTCTCACACCTCGCCCGGAGGTGGAACATCTCAAAAGTGTCTTCACTGGAGAAGAGCCTAAATTTGAAGCTGGCTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR-3UTR CCA 90 bp | TTCAAATTTAGGCTCTTCTCCAGTGAAGACACTTTTGAGATGTTCCACCTCCGGGAGGTGCTTGGGTCTTaGCTGTACCACGGTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: FKFRLFSSEDTFEMFHLREVLGS*LYHGLQ Trigger: CTGGAGACCGTGGTACAGCCAAGACCCAAGCACCTC...CCGGAGGTGGAACATCTCAAAAGTGTCTTCACTGGAGAAGAGCCTAAATTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR GCA 72 bp | AGGTGCTTGGGTCTTGGCTGTACCACGGTCTCCAGATaGGAGAGGCGTGGAATCCTCTGCCTGTCACACCAG | + |
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Preference number: 3 (lower is better) Translates to: RCLGLGCTTVSR*ERRGILCLSHQ Trigger: CTGGTGTGACAGGCAGAGGATTCCACGCCTCTCGCATCTGGAGACCGTGGTACAGCCAAGACCCAAGCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR CCA 72 bp | GAGGCCACAGGGTCCCATCCTCAAAGGACGGCCTCATaGGACAGCCATTCAATTTGTTGGGGGCAGCGTGAG | + |
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Preference number: 3 (lower is better) Translates to: EATGSHPQRTAS*DSHSICWGQRE Trigger: CTCACGCTGCCCCCAACAAATTGAATGGCTGTCCCATGAGGCCGTCCTTTGAGGATGGGACCCTGTGGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR CCA 72 bp | GAGCGCAAAACTCTGGAGAGTGAGGTGCTTGGGTCTTaGCTGTACCACGGTCTCCAGATGCGAGAGGCGTGG | + |
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Preference number: 3 (lower is better) Translates to: ERKTLESEVLGS*LYHGLQMREAW Trigger: CCACGCCTCTCGCATCTGGAGACCGTGGTACAGCCAAGACCCAAGCACCTCACTCTCCAGAGTTTTGCGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR TCA 72 bp | CCCTGGCTCCCTTCCTGTGTACCATTCTTGCCTGACTaGCCCAAAGAACCACAGGAATGCCAGGGTGCGGGT | + |
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Preference number: 3 (lower is better) Translates to: PWLPSCVPFLPD*PKEPQECQGAG Trigger: ACCCGCACCCTGGCATTCCTGTGGTTCTTTGGGTCAGTCAGGCAAGAATGGTACACAGGAAGGGAGCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR GCA 72 bp | ACCACGGTCTCCAGATGCGAGAGGCGTGGAATCCTCTaGCTGTCACACCAGGAAGCAAAGGAAGCCAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: TTVSRCERRGIL*LSHQEAKEARR Trigger: TCTCCTGGCTTCCTTTGCTTCCTGGTGTGACAGGCAGAGGATTCCACGCCTCTCGCATCTGGAGACCGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR-3UTR CAA 90 bp | TCTTGCCTGACTGACCCAAAGAACCACAGGAATGCCAGGGTGCGGGTGCCACACGTAAACAAATCCAGATaGCAAAAGGGCGGGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: SCLTDPKNHRNARVRVPHVNKSR*QKGGGG Trigger: CCCACCCCCGCCCTTTTGCAATCTGGATTTGTTTAC...GTGTGGCACCCGCACCCTGGCATTCCTGTGGTTCTTTGGGTCAGTCAGGCAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR TCA 72 bp | TCAGCCCTGGCTCCCTTCCTGTGTACCATTCTTGCCTaGCTGACCCAAAGAACCACAGGAATGCCAGGGTGC | + |
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Preference number: 3 (lower is better) Translates to: SALAPFLCTILA*LTQRTTGMPGC Trigger: GCACCCTGGCATTCCTGTGGTTCTTTGGGTCAGTCAGGCAAGAATGGTACACAGGAAGGGAGCCAGGGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR CCA 72 bp | TCTTGGCTGTACCACGGTCTCCAGATGCGAGAGGCGTaGAATCCTCTGCCTGTCACACCAGGAAGCAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: SWLYHGLQMREA*NPLPVTPGSKG Trigger: TCCTTTGCTTCCTGGTGTGACAGGCAGAGGATTCCACGCCTCTCGCATCTGGAGACCGTGGTACAGCCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR-3UTR CAA 90 bp | AATGCCAGGGTGCGGGTGCCACACTTTACTCCAGCTTCCTCCCACTTTCGTATTTGGAGAGTGAGGTGCTaGGGTCTTGGCTGTACCACG | + |
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Preference number: 3 (lower is better) Translates to: NARVRVPHFTPASSHFRIWRVRC*GLGCTT Trigger: CGTGGTACAGCCAAGACCCAAGCACCTCACTCTCCA...AATACGAAAGTGGGAGGAAGCTGGAGTAAAGTGTGGCACCCGCACCCTGGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR GCA 72 bp | CTGACCCAAAGAACCACAGGAATGCCAGGGTGCGGGTaGCACACTTTACTCCAGCTTCCTCCCACTTTCGTA | + |
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Preference number: 3 (lower is better) Translates to: LTQRTTGMPGCG*HTLLQLPPTFV Trigger: TACGAAAGTGGGAGGAAGCTGGAGTAAAGTGTGGCACCCGCACCCTGGCATTCCTGTGGTTCTTTGGGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR GCA 72 bp | TCCATCAGCCCTGGCTCCCTTCCTGTGTACCATTCTTaGCTGACTGACCCAAAGAACCACAGGAATGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: SISPGSLPVYHS*LTDPKNHRNAR Trigger: CCTGGCATTCCTGTGGTTCTTTGGGTCAGTCAGGCAAGAATGGTACACAGGAAGGGAGCCAGGGCTGATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR CCA 72 bp | TTTGAGATGTTCCACCTCCGGGCGAGGTGTGAGACTTaGCTATTCCATCAGCCCTGGCTCCCTTCCTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: FEMFHLRARCET*LFHQPWLPSCV Trigger: TACACAGGAAGGGAGCCAGGGCTGATGGAATAGCCAAGTCTCACACCTCGCCCGGAGGTGGAACATCTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| 3UTR TCA 72 bp | ACAGAAGCTGACAAGAGTCAGGTCCTCAACAGTTACTaGGCCTCAGGGGATTTTGTTACAGTAACCACCCGC | + |
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Preference number: 3 (lower is better) Translates to: TEADKSQVLNSY*ASGDFVTVTTR Trigger: GCGGGTGGTTACTGTAACAAAATCCCCTGAGGCTCAGTAACTGTTGAGGACCTGACTCTTGTCAGCTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | CAGGAGGCCACAGGGTCCCATCCTCAAAGGACGGCCTCATGGGACAGCCATTCATCAAGACTGGCTTGCTaGGGGCGGGCACCGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QEATGSHPQRTASWDSHSSRLAC*GRAPGA Trigger: AGCCCCCGGTGCCCGCCCCCAGCAAGCCAGTCTTGA...TGAATGGCTGTCCCATGAGGCCGTCCTTTGAGGATGGGACCCTGTGGCCTCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR GCA 90 bp | CTGACTGACCCAAAGAACCACAGGAATGCCAGGGTGCGGGTGCCACACTTTACTGGCTCAAGACTGGCTTaGTGGGGGCGGGCACCGGGG | + |
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Preference number: 4 (lower is better) Translates to: LTDPKNHRNARVRVPHFTGSRLA*WGRAPG Trigger: CCCCGGTGCCCGCCCCCAGCAAGCCAGTCTTGAGCC...AGTAAAGTGTGGCACCCGCACCCTGGCATTCCTGTGGTTCTTTGGGTCAGTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR GCA 90 bp | GGTCTCCAGATGCGAGAGGCGTGGAATCCTCTGCCTGTCACACCAGGAAGCAAACTCCTCCTCTCGGCCTaGTGCCTGTCCCGGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GLQMREAWNPLPVTPGSKLLLSA*CLSRSG Trigger: CCCTGACCGGGACAGGCAGCAGGCCGAGAGGAGGAG...TTTGCTTCCTGGTGTGACAGGCAGAGGATTCCACGCCTCTCGCATCTGGAGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR TCA 90 bp | CGTGGAATCCTCTGCCTGTCACACCAGGAAGCAAAGGAAGCCAGGAGAGAACCCGTCGCCAGTGCTCGTTaGAAGGCGCCAGCTTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: RGILCLSHQEAKEARREPVASAR*KAPASP Trigger: CGGAGAAGCTGGCGCCTTTCAACGAGCACTGGCGAC...GGGTTCTCTCCTGGCTTCCTTTGCTTCCTGGTGTGACAGGCAGAGGATTCCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR GCA 90 bp | GCCTCATGGGACAGCCATTCAATTTGTTGGGGGCAGCGTGAGGGCTTCTGGGGGAGTCTTCCTCCCAGCTaGTGGCCGTCCTGTTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: ASWDSHSICWGQREGFWGSLPPS*WPSCSD Trigger: ATCGGAACAGGACGGCCAGCAGCTGGGAGGAAGACT...CCCCCAGAAGCCCTCACGCTGCCCCCAACAAATTGAATGGCTGTCCCATGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | TCCAGATGCGAGAGGCGTGGAATCCTCTGCCTGTCACACCAGGAAGCAAAGGAAGCGGGCAGGCTGGTGTaGTTGGCGTACAGTCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SRCERRGILCLSHQEAKEAGRLV*LAYSRS Trigger: GCTCCGACTGTACGCCAACCACACCAGCCTGCCCGC...TTCCTTTGCTTCCTGGTGTGACAGGCAGAGGATTCCACGCCTCTCGCATCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | CAGGAGGCCACAGGGTCCCATCCTCAAAGGACGGCCTCATGGGACAGCCATTCATCTATCTGGCACGGGTaGCAGAGGCGGTACACCTGT | + |
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Preference number: 4 (lower is better) Translates to: QEATGSHPQRTASWDSHSSIWHG*QRRYTC Trigger: ACAGGTGTACCGCCTCTGCCACCCGTGCCAGATAGA...TGAATGGCTGTCCCATGAGGCCGTCCTTTGAGGATGGGACCCTGTGGCCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR TCA 90 bp | CGTGGAATCCTCTGCCTGTCACACCAGGAAGCAAAGGAAGCCAGGAGAGAACCCGCTGGGAGTCTACCTTaGGGAACCTCAGGAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RGILCLSHQEAKEARREPAGSLP*GTSGAG Trigger: CCCAGCTCCTGAGGTTCCTCAAGGTAGACTCCCAGC...GGGTTCTCTCCTGGCTTCCTTTGCTTCCTGGTGTGACAGGCAGAGGATTCCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | CTTGGCTATTCCATCAGCCCTGGCTCCCTTCCTGTGTACCATTCTTGCCTGACTCCGAGGCGGGCAGGCTaGTGTGGTTGGCGTACAGTC | + |
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Preference number: 4 (lower is better) Translates to: LGYSISPGSLPVYHSCLTPRRAG*CGWRTV Trigger: GACTGTACGCCAACCACACCAGCCTGCCCGCCTCGG...AGTCAGGCAAGAATGGTACACAGGAAGGGAGCCAGGGCTGATGGAATAGCCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR TCA 90 bp | CCAGTGAAGACACTTTTGAGATGTTCCACCTCCGGGCGAGGTGTGAGACTTGGCCTTGCTGCGGAAGGCTaGGATGAGGCGCACAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PVKTLLRCSTSGRGVRLGLAAEG*DEAHKG Trigger: CCCTTTGTGCGCCTCATCTCAGCCTTCCGCAGCAAG...GCCAAGTCTCACACCTCGCCCGGAGGTGGAACATCTCAAAAGTGTCTTCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR GCA 90 bp | CAGGAGGCCACAGGGTCCCATCCTCAAAGGACGGCCTCATGGGACAGCCATTCATTGTTGAAGGTGAGGTaGGTGCTGGTGTTGTGCACG | + |
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Preference number: 4 (lower is better) Translates to: QEATGSHPQRTASWDSHSLLKVR*VLVLCT Trigger: CGTGCACAACACCAGCACGCACCTCACCTTCAACAA...TGAATGGCTGTCCCATGAGGCCGTCCTTTGAGGATGGGACCCTGTGGCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | CGTGGAATCCTCTGCCTGTCACACCAGGAAGCAAAGGAAGCCAGGAGAGAACCCCTTCCTCCCAGCTGCTaGCCGTCCTGTTCCGATAAC | + |
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Preference number: 4 (lower is better) Translates to: RGILCLSHQEAKEARREPLPPSC*PSCSDN Trigger: GTTATCGGAACAGGACGGCCAGCAGCTGGGAGGAAG...GGGTTCTCTCCTGGCTTCCTTTGCTTCCTGGTGTGACAGGCAGAGGATTCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | GAGGCGTGGAATCCTCTGCCTGTCACACCAGGAAGCAAAGGAAGCCAGGAGAGACAGCTTCTCCGTGTGTaGGTCCAGGAGGTACTGGAT | + |
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Preference number: 4 (lower is better) Translates to: EAWNPLPVTPGSKGSQERQLLRV*VQEVLD Trigger: ATCCAGTACCTCCTGGACCCACACACGGAGAAGCTG...TCTCTCCTGGCTTCCTTTGCTTCCTGGTGTGACAGGCAGAGGATTCCACGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR TCA 90 bp | AATGCCAGGGTGCGGGTGCCACACTTTACTCCAGCTTCCTCCCACTTTCGTATTCCAGGAGGTACTGGATaGAGTTGGCGAAGGAGACCT | + |
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Preference number: 4 (lower is better) Translates to: NARVRVPHFTPASSHFRIPGGTG*SWRRRP Trigger: AGGTCTCCTTCGCCAACTTCATCCAGTACCTCCTGG...AATACGAAAGTGGGAGGAAGCTGGAGTAAAGTGTGGCACCCGCACCCTGGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR GCA 90 bp | TCACAGAAGCTGACAAGAGTCAGGTCCTCAACAGTTACTGAGCCTCAGGGGATTGTCCTTGGTGGGGAATaGCAGGCTGGCGTTGGCACA | + |
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Preference number: 4 (lower is better) Translates to: SQKLTRVRSSTVTEPQGIVLGGE*QAGVGT Trigger: TGTGCCAACGCCAGCCTGGCATTCCCCACCAAGGAC...AATCCCCTGAGGCTCAGTAACTGTTGAGGACCTGACTCTTGTCAGCTTCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR TCA 90 bp | TGTTCCATGAATACAGGCTGTGGAGTAAACAAATCCAGATTGCAAAAGGGCGGGGCACGTAGCAGTAGATaGCCCCGTGGCGGTCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: CSMNTGCGVNKSRLQKGGARSSR*PRGGRP Trigger: TGGACGACCGCCACGGGGTCATCTACTGCTACGTGC...CCCGCCCTTTTGCAATCTGGATTTGTTTACTCCACAGCCTGTATTCATGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | TCTTGCCTGACTGACCCAAAGAACCACAGGAATGCCAGGGTGCGGGTGCCACACGCTCAGTTTTTCTCCTaGAAAGGTCGTTGTGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SCLTDPKNHRNARVRVPHAQFFS*KGRCAL Trigger: CAAAGCACAACGACCTTTCCAGGAGAAAAACTGAGC...GTGTGGCACCCGCACCCTGGCATTCCTGTGGTTCTTTGGGTCAGTCAGGCAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | TTTTTAAAGCCCATGATGGCTGGGCTGGGTAGTTTGGGTTCTTGGGGGACTAGGATGCCAGGGGGATGTTaGCAAACCAGTCTTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: FLKPMMAGLGSLGSWGTRMPGGC*QTSLPP Trigger: GGGAGGAAGACTGGTTTGCCAACATCCCCCTGGCAT...CCTAGTCCCCCAAGAACCCAAACTACCCAGCCCAGCCATCATGGGCTTTAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | AGATGCGAGAGGCGTGGAATCCTCTGCCTGTCACACCAGGAAGCAAAGGAAGCCGCAGGTTTTCTGGCTTaGGGTAGCCAAAGAGAACAA | + |
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Preference number: 4 (lower is better) Translates to: RCERRGILCLSHQEAKEAAGFLA*GSQREQ Trigger: TTGTTCTCTTTGGCTACCCCAAGCCAGAAAACCTGC...GGCTTCCTTTGCTTCCTGGTGTGACAGGCAGAGGATTCCACGCCTCTCGCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR GCA 90 bp | TCACAGAAGCTGACAAGAGTCAGGTCCTCAACAGTTACTGAGCCTCAGGGGATTGAGCTGTTGCCTCCATaGCAGGGGGATGTTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SQKLTRVRSSTVTEPQGIELLPP*QGDVGK Trigger: TTTGCCAACATCCCCCTGGCATGGAGGCAACAGCTC...AATCCCCTGAGGCTCAGTAACTGTTGAGGACCTGACTCTTGTCAGCTTCTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | TGTTCCATGAATACAGGCTGTGGAGTAAACAAATCCAGATTGCAAAAGGGCGGGCGTACAGTCGGAGCATaGGCACCGCGAACTTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: CSMNTGCGVNKSRLQKGGRTVGA*APRTCG Trigger: ACCGCAAGTTCGCGGTGCCCATGCTCCGACTGTACG...CCCGCCCTTTTGCAATCTGGATTTGTTTACTCCACAGCCTGTATTCATGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | CCAGCTTCAAATTTAGGCTCTTCTCCAGTGAAGACACTTTTGAGATGTTCCACCGCAGGCTGGTGTGGTTaGCGTACAGTCGGAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: PASNLGSSPVKTLLRCSTAGWCG*RTVGAW Trigger: CCATGCTCCGACTGTACGCCAACCACACCAGCCTGC...GGTGGAACATCTCAAAAGTGTCTTCACTGGAGAAGAGCCTAAATTTGAAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | AACCCAGCCAGCTTCAAATTTAGGCTCTTCTCCAGTGAAGACACTTTTGAGATGCAAAAGAGCGGTCCTTaGTGGGGAATGCCAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NPASFKFRLFSSEDTFEMQKSGP*WGMPGW Trigger: CCAGCCTGGCATTCCCCACCAAGGACCGCTCTTTTG...CATCTCAAAAGTGTCTTCACTGGAGAAGAGCCTAAATTTGAAGCTGGCTGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | CTTGGCTATTCCATCAGCCCTGGCTCCCTTCCTGTGTACCATTCTTGCCTGACTGCACGAACAGGAACTTaGTGTACTTCTTCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LGYSISPGSLPVYHSCLTARTGT*CTSSAS Trigger: TGAAGCTGAAGAAGTACACCAAGTTCCTGTTCGTGC...AGTCAGGCAAGAATGGTACACAGGAAGGGAGCCAGGGCTGATGGAATAGCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | TGTTCCATGAATACAGGCTGTGGAGTAAACAAATCCAGATTGCAAAAGGGCGGGACGTTCTCCTCCATGTaGCTCAAGACTGGCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSMNTGCGVNKSRLQKGGTFSSM*LKTGLL Trigger: CAGCAAGCCAGTCTTGAGCCACATGGAGGAGAACGT...CCCGCCCTTTTGCAATCTGGATTTGTTTACTCCACAGCCTGTATTCATGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | TTCAAATTTAGGCTCTTCTCCAGTGAAGACACTTTTGAGATGTTCCACCTCCGGGGGTCCAGGAGGTACTaGATGAAGTTGGCGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FKFRLFSSEDTFEMFHLRGSRRY*MKLAKE Trigger: CTCCTTCGCCAACTTCATCCAGTACCTCCTGGACCC...CCGGAGGTGGAACATCTCAAAAGTGTCTTCACTGGAGAAGAGCCTAAATTTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | CCAGCTTCAAATTTAGGCTCTTCTCCAGTGAAGACACTTTTGAGATGTTCCACCCTAGGATGTGTGGCCTaGAGAGAGACGTGTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PASNLGSSPVKTLLRCSTLGCVA*RETCAD Trigger: ATCTGCACACGTCTCTCTCCAGGCCACACATCCTAG...GGTGGAACATCTCAAAAGTGTCTTCACTGGAGAAGAGCCTAAATTTGAAGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CCA 90 bp | AACCCAGCCAGCTTCAAATTTAGGCTCTTCTCCAGTGAAGACACTTTTGAGATGGATGGGCATCATGAGTaGACCAGTCGTAGCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NPASFKFRLFSSEDTFEMDGHHE*TSRSLS Trigger: TGAGAGGCTACGACTGGTCCACTCATGATGCCCATC...CATCTCAAAAGTGTCTTCACTGGAGAAGAGCCTAAATTTGAAGCTGGCTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CCA 90 bp | TCACCGAGGCGGGCAGGCTGGTGTGGTTGGCGTACAGTCGGAGCATaGGCACCGCGAACTTGCGGTAAAACTCTTCGTTCTCCAGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SPRRAGWCGWRTVGA*APRTCGKTLRSPAR Trigger: TCGAGCTGGAGAACGAAGAGTTTTACCGCAAGTTCGCGGTGCCCATGCTCCGACTGTACGCCAACCACACCAGCCTGCCCGCCTCGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CAA 90 bp | TCTTGCCTGACTGACCCAAAGAACCACAGGAATGCCAGGGTGCGGGTGCCACACGGCAGGCTGGTGTGGTaGGCGTACAGTCGGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SCLTDPKNHRNARVRVPHGRLVW*AYSRSM Trigger: CATGCTCCGACTGTACGCCAACCACACCAGCCTGCC...GTGTGGCACCCGCACCCTGGCATTCCTGTGGTTCTTTGGGTCAGTCAGGCAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CAA 90 bp | TCTTGCCTGACTGACCCAAAGAACCACAGGAATGCCAGGGTGCGGGTGCCACACTTGGCGAAGGAGACCTaGAGCCCGGCGCTGAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCLTDPKNHRNARVRVPHLAKET*SPALKA Trigger: GGCTTTCAGCGCCGGGCTCAAGGTCTCCTTCGCCAA...GTGTGGCACCCGCACCCTGGCATTCCTGTGGTTCTTTGGGTCAGTCAGGCAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CCA 90 bp | CGGCCTGCTGCCTGTCCCGGTCAGGGTTCTGATGGGCATCATGAGTaGACCAGTCGTAGCCTCTCACGTTCTCCTCCATGTGGCTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RPAACPGQGSDGHHE*TSRSLSRSPPCGSR Trigger: TCTTGAGCCACATGGAGGAGAACGTGAGAGGCTACGACTGGTCCACTCATGATGCCCATCAGAACCCTGACCGGGACAGGCAGCAGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043050.9 ENSMUST00000124142.2 |
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| CDS CCA 90 bp | TCGTTGAAAGGCGCCAGCTTCTCCGTGTGTGGGTCCAGGAGGTACTaGATGAAGTTGGCGAAGGAGACCTTGAGCCCGGCGCTGAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLKGASFSVCGSRRY*MKLAKETLSPALKA Trigger: GGCTTTCAGCGCCGGGCTCAAGGTCTCCTTCGCCAACTTCATCCAGTACCTCCTGGACCCACACACGGAGAAGCTGGCGCCTTTCAACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS GCA 90 bp | GGCTGGTGTGGTTGGCGTACAGTCGGAGCATGGGCACCGCGAACTTaGGGTAAAACTCTTCGTTCTCCAGCTCGAACTTGCTGCGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWCGWRTVGAWAPRT*GKTLRSPARTCCGR Trigger: CCTTCCGCAGCAAGTTCGAGCTGGAGAACGAAGAGTTTTACCGCAAGTTCGCGGTGCCCATGCTCCGACTGTACGCCAACCACACCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CCA 90 bp | GGTTCAGTTCGTAGTTGGGGATGTCGTCAAAAGAGCGGTCCTTGGTaGGGAATGCCAGGCTGGCGTTGGCACAGAAGTCTCTCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSVRSWGCRQKSGPW*GMPGWRWHRSLSAG Trigger: GCCTGCTGAGAGACTTCTGTGCCAACGCCAGCCTGGCATTCCCCACCAAGGACCGCTCTTTTGACGACATCCCCAACTACGAACTGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043050.9 ENSMUST00000124142.2 |
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| CDS CCA 90 bp | CCTCGTAGAGTTTATAGAGCTGTTGCCTCCATGCCAGGGGGATGTTaGCAAACCAGTCTTCCTCCCAGCTGCTGGCCGTCCTGTTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: PRRVYRAVASMPGGC*QTSLPPSCWPSCSD Trigger: ATCGGAACAGGACGGCCAGCAGCTGGGAGGAAGACTGGTTTGCCAACATCCCCCTGGCATGGAGGCAACAGCTCTATAAACTCTACGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CAA 90 bp | GTCTCCAGATGCGAGAGGCGTGGAATCCTCTGCCTGTCACACCAGGAAGCAAAGTTCTCCAGCTCGAACTaGCTGCGGAAGGCTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSRCERRGILCLSHQEAKFSSSN*LRKAEM Trigger: CATCTCAGCCTTCCGCAGCAAGTTCGAGCTGGAGAA...CTTTGCTTCCTGGTGTGACAGGCAGAGGATTCCACGCCTCTCGCATCTGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CAA 90 bp | TCTTGCCTGACTGACCCAAAGAACCACAGGAATGCCAGGGTGCGGGTGCCACACAGGTACTGGATGAAGTaGGCGAAGGAGACCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCLTDPKNHRNARVRVPHRYWMK*AKETLS Trigger: GCTCAAGGTCTCCTTCGCCAACTTCATCCAGTACCT...GTGTGGCACCCGCACCCTGGCATTCCTGTGGTTCTTTGGGTCAGTCAGGCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CAA 90 bp | AATGCCAGGGTGCGGGTGCCACACTTTACTCCAGCTTCCTCCCACTTTCGTATTTGTCGCCAGTGCTCGTaGAAAGGCGCCAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NARVRVPHFTPASSHFRICRQCS*KGASFS Trigger: GGAGAAGCTGGCGCCTTTCAACGAGCACTGGCGACA...AATACGAAAGTGGGAGGAAGCTGGAGTAAAGTGTGGCACCCGCACCCTGGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS GCA 90 bp | GAGAACAAAGTCGGCCTCGTAGAGTTTATAGAGCTGTTGCCTCCATaGCAGGGGGATGTTGGCAAACCAGTCTTCCTCCCAGCTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ENKVGLVEFIELLPP*QGDVGKPVFLPAAG Trigger: GCCAGCAGCTGGGAGGAAGACTGGTTTGCCAACATCCCCCTGGCATGGAGGCAACAGCTCTATAAACTCTACGAGGCCGACTTTGTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CAA 90 bp | CCAGCTTCAAATTTAGGCTCTTCTCCAGTGAAGACACTTTTGAGATGTTCCACCTGGCTCAAGACTGGCTaGCTGGGGGCGGGCACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PASNLGSSPVKTLLRCSTWLKTG*LGAGTG Trigger: CCCGGTGCCCGCCCCCAGCAAGCCAGTCTTGAGCCA...GGTGGAACATCTCAAAAGTGTCTTCACTGGAGAAGAGCCTAAATTTGAAGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CAA 90 bp | TTTTTAAAGCCCATGATGGCTGGGCTGGGTAGTTTGGGTTCTTGGGGGACTAGGCGGCGCCAGAACTTGTaGAAGGTGAGGTGCGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLKPMMAGLGSLGSWGTRRRQNL*KVRCVL Trigger: CAGCACGCACCTCACCTTCAACAAGTTCTGGCGCCG...CCTAGTCCCCCAAGAACCCAAACTACCCAGCCCAGCCATCATGGGCTTTAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CAA 90 bp | CCAAAGAACCACAGGAATGCCAGGGTGCGGGTGCCACACTTTACTCCAGCTTCCGAGTTTATAGAGCTGTaGCCTCCATGCCAGGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PKNHRNARVRVPHFTPASEFIEL*PPCQGD Trigger: ATCCCCCTGGCATGGAGGCAACAGCTCTATAAACTC...GGAAGCTGGAGTAAAGTGTGGCACCCGCACCCTGGCATTCCTGTGGTTCTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CAA 90 bp | TTTTTAAAGCCCATGATGGCTGGGCTGGGTAGTTTGGGTTCTTGGGGGACTAGGCGCACGAACAGGAACTaGGTGTACTTCTTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLKPMMAGLGSLGSWGTRRTNRN*VYFFSF Trigger: GAAGCTGAAGAAGTACACCAAGTTCCTGTTCGTGCG...CCTAGTCCCCCAAGAACCCAAACTACCCAGCCCAGCCATCATGGGCTTTAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS-3UTR CAA 90 bp | AACCCAGCCAGCTTCAAATTTAGGCTCTTCTCCAGTGAAGACACTTTTGAGATGTCAAAAGAGCGGTCCTaGGTGGGGAATGCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NPASFKFRLFSSEDTFEMSKERS*VGNARL Trigger: CAGCCTGGCATTCCCCACCAAGGACCGCTCTTTTGA...CATCTCAAAAGTGTCTTCACTGGAGAAGAGCCTAAATTTGAAGCTGGCTGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CCA 72 bp | AAGCCTCACTCACCGAGGCGGGCAGGCTGGTGTGGTTaGCGTACAGTCGGAGCATGGGCACCGCGAACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: KPHSPRRAGWCG*RTVGAWAPRTC Trigger: GCAAGTTCGCGGTGCCCATGCTCCGACTGTACGCCAACCACACCAGCCTGCCCGCCTCGGTGAGTGAGGCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CCA 72 bp | CTGAAAGCCTCACTCACCGAGGCGGGCAGGCTGGTGTaGTTGGCGTACAGTCGGAGCATGGGCACCGCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LKASLTEAGRLV*LAYSRSMGTAN Trigger: GTTCGCGGTGCCCATGCTCCGACTGTACGCCAACCACACCAGCCTGCCCGCCTCGGTGAGTGAGGCTTTCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CCA 72 bp | GGCGCCAGCTTCTCCGTGTGTGGGTCCAGGAGGTACTaGATGAAGTTGGCGAAGGAGACCTTGAGCCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GASFSVCGSRRY*MKLAKETLSPA Trigger: CGCCGGGCTCAAGGTCTCCTTCGCCAACTTCATCCAGTACCTCCTGGACCCACACACGGAGAAGCTGGCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CAA 72 bp | AAAGCCTCACTCACCGAGGCGGGCAGGCTGGTGTGGTaGGCGTACAGTCGGAGCATGGGCACCGCGAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: KASLTEAGRLVW*AYSRSMGTANL Trigger: CAAGTTCGCGGTGCCCATGCTCCGACTGTACGCCAACCACACCAGCCTGCCCGCCTCGGTGAGTGAGGCTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CAA 90 bp | GTGTGTGGGTCCAGGAGGTACTGGATGAAGTTGGCGAAGGAGACCTaGAGCCCGGCGCTGAAAGCCTCACTCACCGAGGCGGGCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VCGSRRYWMKLAKET*SPALKASLTEAGRL Trigger: CAGCCTGCCCGCCTCGGTGAGTGAGGCTTTCAGCGCCGGGCTCAAGGTCTCCTTCGCCAACTTCATCCAGTACCTCCTGGACCCACACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CAA 90 bp | GGCGCCAGCTTCTCCGTGTGTGGGTCCAGGAGGTACTGGATGAAGTaGGCGAAGGAGACCTTGAGCCCGGCGCTGAAAGCCTCACTCACC | + |
|
Preference number: 6 (lower is better) Translates to: GASFSVCGSRRYWMK*AKETLSPALKASLT Trigger: GGTGAGTGAGGCTTTCAGCGCCGGGCTCAAGGTCTCCTTCGCCAACTTCATCCAGTACCTCCTGGACCCACACACGGAGAAGCTGGCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CCA 72 bp | TGGAGCTGGGAGTCTACCTTGAGGAACCTCAGGAGCTaGGCAGCGTCCTCATCGAGCGTCTCCAGCTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: WSWESTLRNLRS*AASSSSVSSFP Trigger: GGGGAAGCTGGAGACGCTCGATGAGGACGCTGCCCAGCTCCTGAGGTTCCTCAAGGTAGACTCCCAGCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CAA 90 bp | ATGTCGTCAAAAGAGCGGTCCTTGGTGGGGAATGCCAGGCTGGCGTaGGCACAGAAGTCTCTCAGCAGGCTCCTCCTCTCGGCCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: MSSKERSLVGNARLA*AQKSLSRLLLSACC Trigger: GCAGCAGGCCGAGAGGAGGAGCCTGCTGAGAGACTTCTGTGCCAACGCCAGCCTGGCATTCCCCACCAAGGACCGCTCTTTTGACGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043050.9 ENSMUST00000124142.2 |
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| CDS GCA 72 bp | CAGAACTTGTTGAAGGTGAGGTGCGTGCTGGTGTTGTaGACGTGTTCCCGGGGGATGTCCAGGGGGTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: QNLLKVRCVLVL*TCSRGMSRGSR Trigger: CCGAGACCCCCTGGACATCCCCCGGGAACACGTGCACAACACCAGCACGCACCTCACCTTCAACAAGTTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CCA 72 bp | CGTCAAAAGAGCGGTCCTTGGTGGGGAATGCCAGGCTaGCGTTGGCACAGAAGTCTCTCAGCAGGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RQKSGPWWGMPG*RWHRSLSAGSS Trigger: GGAGGAGCCTGCTGAGAGACTTCTGTGCCAACGCCAGCCTGGCATTCCCCACCAAGGACCGCTCTTTTGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043050.9 ENSMUST00000124142.2 |
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| CDS CAA 72 bp | AAAGAGCGGTCCTTGGTGGGGAATGCCAGGCTGGCGTaGGCACAGAAGTCTCTCAGCAGGCTCCTCCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: KERSLVGNARLA*AQKSLSRLLLS Trigger: CGAGAGGAGGAGCCTGCTGAGAGACTTCTGTGCCAACGCCAGCCTGGCATTCCCCACCAAGGACCGCTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043050.9 ENSMUST00000124142.2 |
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| CDS CAA 72 bp | TCCAGGAGGTACTGGATGAAGTTGGCGAAGGAGACCTaGAGCCCGGCGCTGAAAGCCTCACTCACCGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SRRYWMKLAKET*SPALKASLTEA Trigger: CGCCTCGGTGAGTGAGGCTTTCAGCGCCGGGCTCAAGGTCTCCTTCGCCAACTTCATCCAGTACCTCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CCA 72 bp | CGGGCAGGCTGGTGTGGTTGGCGTACAGTCGGAGCATaGGCACCGCGAACTTGCGGTAAAACTCTTCGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RAGWCGWRTVGA*APRTCGKTLRS Trigger: AGAACGAAGAGTTTTACCGCAAGTTCGCGGTGCCCATGCTCCGACTGTACGCCAACCACACCAGCCTGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CAA 72 bp | TTCTCCGTGTGTGGGTCCAGGAGGTACTGGATGAAGTaGGCGAAGGAGACCTTGAGCCCGGCGCTGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FSVCGSRRYWMK*AKETLSPALKA Trigger: GGCTTTCAGCGCCGGGCTCAAGGTCTCCTTCGCCAACTTCATCCAGTACCTCCTGGACCCACACACGGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
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| CDS CCA 72 bp | GCCTGTCCCGGTCAGGGTTCTGATGGGCATCATGAGTaGACCAGTCGTAGCCTCTCACGTTCTCCTCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: ACPGQGSDGHHE*TSRSLSRSPPC Trigger: ACATGGAGGAGAACGTGAGAGGCTACGACTGGTCCACTCATGATGCCCATCAGAACCCTGACCGGGACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043050.9 ENSMUST00000124142.2 |
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| CDS CCA 72 bp | CGTAGTTGGGGATGTCGTCAAAAGAGCGGTCCTTGGTaGGGAATGCCAGGCTGGCGTTGGCACAGAAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSWGCRQKSGPW*GMPGWRWHRSL Trigger: GAGACTTCTGTGCCAACGCCAGCCTGGCATTCCCCACCAAGGACCGCTCTTTTGACGACATCCCCAACTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043050.9 ENSMUST00000124142.2 |
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| CDS CCA 72 bp | GGCGGTCGTCCACGATCAGGTGGTTCAGTTCGTAGTTaGGGATGTCGTCAAAAGAGCGGTCCTTGGTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGRPRSGGSVRS*GCRQKSGPWWG Trigger: TCCCCACCAAGGACCGCTCTTTTGACGACATCCCCAACTACGAACTGAACCACCTGATCGTGGACGACCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043050.9 ENSMUST00000124142.2 |
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| CDS CCA 72 bp | GTTTATAGAGCTGTTGCCTCCATGCCAGGGGGATGTTaGCAAACCAGTCTTCCTCCCAGCTGCTGGCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VYRAVASMPGGC*QTSLPPSCWPS Trigger: GGACGGCCAGCAGCTGGGAGGAAGACTGGTTTGCCAACATCCCCCTGGCATGGAGGCAACAGCTCTATAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
||
| CDS GCA 72 bp | GGTTGGCGTACAGTCGGAGCATGGGCACCGCGAACTTaGGGTAAAACTCTTCGTTCTCCAGCTCGAACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GWRTVGAWAPRT*GKTLRSPARTC Trigger: GCAAGTTCGAGCTGGAGAACGAAGAGTTTTACCGCAAGTTCGCGGTGCCCATGCTCCGACTGTACGCCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
||
| CDS GCA 72 bp | GTCGGCCTCGTAGAGTTTATAGAGCTGTTGCCTCCATaGCAGGGGGATGTTGGCAAACCAGTCTTCCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VGLVEFIELLPP*QGDVGKPVFLP Trigger: TGGGAGGAAGACTGGTTTGCCAACATCCCCCTGGCATGGAGGCAACAGCTCTATAAACTCTACGAGGCCGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
||
| CDS CAA 90 bp | GTAGCCAAAGAGAACAAAGTCGGCCTCGTAGAGTTTATAGAGCTGTaGCCTCCATGCCAGGGGGATGTTGGCAAACCAGTCTTCCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VAKENKVGLVEFIEL*PPCQGDVGKPVFLP Trigger: TGGGAGGAAGACTGGTTTGCCAACATCCCCCTGGCATGGAGGCAACAGCTCTATAAACTCTACGAGGCCGACTTTGTTCTCTTTGGCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043050.9 |
||
| CDS GCA 72 bp | CTGCTCAGTTTTTCTCCTGGAAAGGTCGTTGTGCTTTaGGTCAGAACTAAGGAGAGTATCCAAAAACTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LLSFSPGKVVVL*VRTKESIQKLI Trigger: GATGAGTTTTTGGATACTCTCCTTAGTTCTGACGCAAAGCACAACGACCTTTCCAGGAGAAAAACTGAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043050.9 ENSMUST00000124142.2 |
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