Pregenerated sensors for CHST11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034612Ensembl transcript IDs: ENSMUST00000040110.8
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAAATTTCCAACCTTCTGGAGGAGAGGGAGGTCCTGGATGCTCTaGCAATGCAGGACATGGAGGGTGGGCATGTGCCTGTGGGTACCA | + |
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Preference number: 1 (lower is better) Translates to: SKFPTFWRRGRSWML*QCRTWRVGMCLWVP Trigger: TGGTACCCACAGGCACATGCCCACCCTCCATGTCCTGCATTGGCAGAGCATCCAGGACCTCCCTCTCCTCCAGAAGGTTGGAAATTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR CCA 90 bp | ACAGGAAAGAGCAAATTTCCAACCTTCTGGAGGAGAGGGAGGTCCTaGATGCTCTGCCAATGCAGGACATGGAGGGTGGGCATGTGCCTG | + |
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Preference number: 1 (lower is better) Translates to: TGKSKFPTFWRRGRS*MLCQCRTWRVGMCL Trigger: CAGGCACATGCCCACCCTCCATGTCCTGCATTGGCAGAGCATCCAGGACCTCCCTCTCCTCCAGAAGGTTGGAAATTTGCTCTTTCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR CCA 90 bp | GATGGAGTCAGTCCTGCTGACAAAGAGGTGGGCCAGGATGGGACATaGGTACCAGGAGTGCACAGGCTTGGGCAATTTGTGTATGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: DGVSPADKEVGQDGT*VPGVHRLGQFVYVC Trigger: ACACACATACACAAATTGCCCAAGCCTGTGCACTCCTGGTACCCATGTCCCATCCTGGCCCACCTCTTTGTCAGCAGGACTGACTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR TCA 90 bp | GGAGCATTCTTGGAGCATGGGCTAAACCTGTGTGCTCAGAAGGGCTaGCCAAAGAGAAGTTTCTGGTTCCCATGTTCTCCTTGTGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: GAFLEHGLNLCAQKG*PKRSFWFPCSPCGC Trigger: GCAGCCACAAGGAGAACATGGGAACCAGAAACTTCTCTTTGGTCAGCCCTTCTGAGCACACAGGTTTAGCCCATGCTCCAAGAATGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR CCA 90 bp | GGCATTGATCAGCAAGGAACAGGAAAGAGCAAATTTCCAACCTTCTaGAGGAGAGGGAGGTCCTGGATGCTCTGCCAATGCAGGACATGG | + |
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Preference number: 1 (lower is better) Translates to: GIDQQGTGKSKFPTF*RRGRSWMLCQCRTW Trigger: CCATGTCCTGCATTGGCAGAGCATCCAGGACCTCCCTCTCCTCCAGAAGGTTGGAAATTTGCTCTTTCCTGTTCCTTGCTGATCAATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR GCA 90 bp | ACAGTCTTTCTCCCTGTAAGAGAGAGAAAGGGAGTAAGTACCATCTaGACACAGCACTGGACCACAGACGGAAGACAAACAGATGCGGAC | + |
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Preference number: 1 (lower is better) Translates to: TVFLPVRERKGVSTI*TQHWTTDGRQTDAD Trigger: GTCCGCATCTGTTTGTCTTCCGTCTGTGGTCCAGTGCTGTGTGCAGATGGTACTTACTCCCTTTCTCTCTCTTACAGGGAGAAAGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR CCA 90 bp | GAAGGGCTGACCAAAGAGAAGTTTCTGGTTCCCATGTTCTCCTTGTaGCTGCAGAGAAAGCCTTACTCCCAGAACCAGGAAGAAAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: EGLTKEKFLVPMFSL*LQRKPYSQNQEERV Trigger: AACCCTTTCTTCCTGGTTCTGGGAGTAAGGCTTTCTCTGCAGCCACAAGGAGAACATGGGAACCAGAAACTTCTCTTTGGTCAGCCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR GCA 90 bp | CGGATACCACCTTTTGTACCTGATGAGAGCAGATCAAAATCTGCCTaGTGCTGTCCAAGGGTTCAGCTGTTTCTAGAAGGTCCTGTTGTC | + |
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Preference number: 1 (lower is better) Translates to: RIPPFVPDESRSKSA*CCPRVQLFLEGPVV Trigger: GACAACAGGACCTTCTAGAAACAGCTGAACCCTTGGACAGCAGCAGGCAGATTTTGATCTGCTCTCATCAGGTACAAAAGGTGGTATCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR CCA 90 bp | AAATGTATGCAGTGCACTGTTTTAAGTGGCAGGCAGGACAAGATGTaGACTGGAGATCACAGTAGGAGGCCCTTGAGAAATGTTCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: KCMQCTVLSGRQDKM*TGDHSRRPLRNVPP Trigger: GGGAGGAACATTTCTCAAGGGCCTCCTACTGTGATCTCCAGTCCACATCTTGTCCTGCCTGCCACTTAAAACAGTGCACTGCATACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR TCA 90 bp | AGCTGTCAATCTTTGCAGACCTCAGACAGGCTAGATCACCCTCACTaGAGGCTACTGTGTGAAAAACCAGCTAAGACATGGTCTGCCATA | + |
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Preference number: 1 (lower is better) Translates to: SCQSLQTSDRLDHPH*RLLCEKPAKTWSAI Trigger: TATGGCAGACCATGTCTTAGCTGGTTTTTCACACAGTAGCCTTCAGTGAGGGTGATCTAGCCTGTCTGAGGTCTGCAAAGATTGACAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR TCA 90 bp | GTGAACACAAGACAGGAGAAAGACTCCCTCATTCTGGAAGCGTATTaGTACACTCTCCCCAGAAGGACAGTCTTTCTCCCTGTAAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: VNTRQEKDSLILEAY*YTLPRRTVFLPVRE Trigger: CTCTCTTACAGGGAGAAAGACTGTCCTTCTGGGGAGAGTGTATCAATACGCTTCCAGAATGAGGGAGTCTTTCTCCTGTCTTGTGTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR GCA 90 bp | TATACAATGCTCAGGAGCATTCTTGGAGCATGGGCTAAACCTGTGTaGTCAGAAGGGCTGACCAAAGAGAAGTTTCTGGTTCCCATGTTC | + |
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Preference number: 1 (lower is better) Translates to: YTMLRSILGAWAKPV*SEGLTKEKFLVPMF Trigger: GAACATGGGAACCAGAAACTTCTCTTTGGTCAGCCCTTCTGAGCACACAGGTTTAGCCCATGCTCCAAGAATGCTCCTGAGCATTGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR CCA 90 bp | AGAACTATGTACAGCATCTGCTACGTACCCGGACACTGGCTGTCATaGGAATGTGGCTCAAATGTCAACCGCAAAGTATCAGAAACAACT | + |
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Preference number: 1 (lower is better) Translates to: RTMYSICYVPGHWLS*ECGSNVNRKVSETT Trigger: AGTTGTTTCTGATACTTTGCGGTTGACATTTGAGCCACATTCCCATGACAGCCAGTGTCCGGGTACGTAGCAGATGCTGTACATAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR CCA 90 bp | CTTATCATCAGAACTATGTACAGCATCTGCTACGTACCCGGACACTaGCTGTCATGGGAATGTGGCTCAAATGTCAACCGCAAAGTATCA | + |
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Preference number: 1 (lower is better) Translates to: LIIRTMYSICYVPGH*LSWECGSNVNRKVS Trigger: TGATACTTTGCGGTTGACATTTGAGCCACATTCCCATGACAGCCAGTGTCCGGGTACGTAGCAGATGCTGTACATAGTTCTGATGATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR GCA 90 bp | CACATAAAGCTTGCTGAAGGCCAAGGCTCCTGGTTTCACTCAATGTaGTATCTGCAGTCAAGCCTGGAGAATAGTAGATGCTCAATACTT | + |
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Preference number: 1 (lower is better) Translates to: HIKLAEGQGSWFHSM*YLQSSLENSRCSIL Trigger: AAGTATTGAGCATCTACTATTCTCCAGGCTTGACTGCAGATAGCACATTGAGTGAAACCAGGAGCCTTGGCCTTCAGCAAGCTTTATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR GCA 90 bp | ATACCACCTTTTGTACCTGATGAGAGCAGATCAAAATCTGCCTGCTaGTGTCCAAGGGTTCAGCTGTTTCTAGAAGGTCCTGTTGTCTAT | + |
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Preference number: 1 (lower is better) Translates to: IPPFVPDESRSKSAC*CPRVQLFLEGPVVY Trigger: ATAGACAACAGGACCTTCTAGAAACAGCTGAACCCTTGGACAGCAGCAGGCAGATTTTGATCTGCTCTCATCAGGTACAAAAGGTGGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR CCA 90 bp | GCCAAGGCTCCTGGTTTCACTCAATGTGCTATCTGCAGTCAAGCCTaGAGAATAGTAGATGCTCAATACTTATTGACTAGAAAACAACCA | + |
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Preference number: 1 (lower is better) Translates to: AKAPGFTQCAICSQA*RIVDAQYLLTRKQP Trigger: TGGTTGTTTTCTAGTCAATAAGTATTGAGCATCTACTATTCTCCAGGCTTGACTGCAGATAGCACATTGAGTGAAACCAGGAGCCTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR TCA 90 bp | AACCTTTCTACACTCTACAATAAACAGTCAAGCCGATACATATTTTaGAAATTGTCACTAGGAAGTGTGAACACAAGACAGGAGAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: NLSTLYNKQSSRYIF*KLSLGSVNTRQEKD Trigger: GTCTTTCTCCTGTCTTGTGTTCACACTTCCTAGTGACAATTTTCAAAATATGTATCGGCTTGACTGTTTATTGTAGAGTGTAGAAAGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGTGCTCAGAAGGGCTGACCAAAGAGAAGTTTCTGGTTCCCATGTTCTCCTCCACCCCGCTCCCCTaGAAAGACAGCTGTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: PVCSEGLTKEKFLVPMFSSTPLP*KDSCPS Trigger: GGAAGGACAGCTGTCTTTGCAGGGGAGCGGGGTGGA...GGAGAACATGGGAACCAGAAACTTCTCTTTGGTCAGCCCTTCTGAGCACACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCCCTGTAAGAGAGAGAAAGGGAGTAAGTACCATCTGCACACAGCACTGGCCTCCCCTCCCCCAATaGGCCATAGCCAGCGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: FLPVRERKGVSTICTQHWPPLPQ*AIASEA Trigger: TGCTTCGCTGGCTATGGCTCATTGGGGGAGGGGAGG...CCAGTGCTGTGTGCAGATGGTACTTACTCCCTTTCTCTCTCTTACAGGGAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTATCATCAGAACTATGTACAGCATCTGCTACGTACCCGGACACTGGCTGTGGATGCTCTGCCAATaGAGGACATGGAGGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SLIIRTMYSICYVPGHWLWMLCQ*RTWRVG Trigger: GCCCACCCTCCATGTCCTGCATTGGCAGAGCATCCA...CAGCCAGTGTCCGGGTACGTAGCAGATGCTGTACATAGTTCTGATGATAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR CCA 90 bp | GCACACAGTGAACAGTTCCAAACTGTGGGTGGAAGTGAGGAGTATCCCCACGAGGACGGGATCACTCTCTaGGGCAGTATCCAGATGAAG | + |
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Preference number: 2 (lower is better) Translates to: AHSEQFQTVGGSEEYPHEDGITL*GSIQMK Trigger: CTTCATCTGGATACTGCCCCAGAGAGTGATCCCGTC...CTCGTGGGGATACTCCTCACTTCCACCCACAGTTTGGAACTGTTCACTGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCCCTGTAAGAGAGAGAAAGGGAGTAAGTACCATCTGCACACAGCACTGGAACTGTGGGTGGAAGTaGGGAGTATCCCCACGAGGC | + |
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Preference number: 2 (lower is better) Translates to: FLPVRERKGVSTICTQHWNCGWK*GVSPRG Trigger: GCCTCGTGGGGATACTCCTCACTTCCACCCACAGTT...CCAGTGCTGTGTGCAGATGGTACTTACTCCCTTTCTCTCTCTTACAGGGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTATCATCAGAACTATGTACAGCATCTGCTACGTACCCGGACACTGGCTGGAGGGAGGTCCTGGATaGTCTGCCAATGCAGGACAT | + |
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Preference number: 2 (lower is better) Translates to: SLIIRTMYSICYVPGHWLEGGPG*SANAGH Trigger: ATGTCCTGCATTGGCAGAGCATCCAGGACCTCCCTC...CAGCCAGTGTCCGGGTACGTAGCAGATGCTGTACATAGTTCTGATGATAAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTCCCTTATCATCAGAACTATGTACAGCATCTGCTACGTACCCGGACACTAGTCTAAAGTCTGTGTaGGGACCAAAGGGATGGGGG | + |
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Preference number: 2 (lower is better) Translates to: PAPLSSELCTASATYPDTSLKSV*GPKGWG Trigger: CCCCCATCCCTTTGGTCCTCACACAGACTTTAGACT...AGTGTCCGGGTACGTAGCAGATGCTGTACATAGTTCTGATGATAAGGGAGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGGCAGACTATGTATTCAAGGCTCTGAAAACTCCTGCAGACAGGAACCTGACGACTGTACTCTCCTCTaGACAGACAGGAGCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: QGRLCIQGSENSCRQEPDDCTLL*TDRSRL Trigger: CAGCCTGCTCCTGTCTGTGCAGAGGAGAGTACAGTC...GTCAGGTTCCTGTCTGCAGGAGTTTTCAGAGCCTTGAATACATAGTCTGCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGCCCAGAAATGCTACATTCTCCCAGTTTCACAAGGCAGACTATGTATTCGCAGGACATGGAGGGTaGGCATGTGCCTGTGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: MQPRNATFSQFHKADYVFAGHGG*ACACGY Trigger: GTACCCACAGGCACATGCCCACCCTCCATGTCCTGC...GAATACATAGTCTGCCTTGTGAAACTGGGAGAATGTAGCATTTCTGGGCTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR CAA 90 bp | TCAGAAGGGCTGACCAAAGAGAAGTTTCTGGTTCCCATGTTCTCCTaGTGGCTGCAGAGAAAGCCTTACTCCCAGAACCAGGAAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SEGLTKEKFLVPMFS*WLQRKPYSQNQEER Trigger: CCTTTCTTCCTGGTTCTGGGAGTAAGGCTTTCTCTGCAGCCACAAGGAGAACATGGGAACCAGAAACTTCTCTTTGGTCAGCCCTTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCTTGTGGCTGCAGAGAAAGCCTTACTCCCAGAACCAGGAAGAAAGGGTTAAGGGATGGGGGTGTTaGTTCACTGTTGAGCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: FSLWLQRKPYSQNQEERVKGWGC*FTVELD Trigger: ATCCAGCTCAACAGTGAACCAACACCCCCATCCCTT...AACCCTTTCTTCCTGGTTCTGGGAGTAAGGCTTTCTCTGCAGCCACAAGGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR CAA 90 bp | AGTTTGTGGACTTCACCAGAACACAAGGACACCTTGGAGACAGTGTaGCAGTATCCACTTCTAAAAACAGGGATATTCCACCCCGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SLWTSPEHKDTLETV*QYPLLKTGIFHPAP Trigger: GGGAGCGGGGTGGAATATCCCTGTTTTTAGAAGTGGATACTGCAACACTGTCTCCAAGGTGTCCTTGTGTTCTGGTGAAGTCCACAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCCCTGTAAGAGAGAGAAAGGGAGTAAGTACCATCTGCACACAGCACTGGTCACATAAAGCTTGCTaGAGGCCAAGGCTCCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: FLPVRERKGVSTICTQHWSHKAC*RPRLLV Trigger: AACCAGGAGCCTTGGCCTTCAGCAAGCTTTATGTGA...CCAGTGCTGTGTGCAGATGGTACTTACTCCCTTTCTCTCTCTTACAGGGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR GCA 90 bp | GCTACATTCTCCCAGTTTCACAAGGCAGACTATGTATTCAAGGCTCTGAAAACTTGTAGCAGTTACCGCTaGCCCCAGCCTCCTTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: ATFSQFHKADYVFKALKTCSSYR*PQPPCE Trigger: CTCACAAGGAGGCTGGGGGCAGCGGTAACTGCTACA...AGTTTTCAGAGCCTTGAATACATAGTCTGCCTTGTGAAACTGGGAGAATGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR CCA 90 bp | GCACACAGTGAACAGTTCCAAACTGTGGGTGGAAGTGAGGAGTATCCCCACGAGATCTGCAGTCAAGCCTaGAGAATAGTAGATGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: AHSEQFQTVGGSEEYPHEICSQA*RIVDAQ Trigger: TTGAGCATCTACTATTCTCCAGGCTTGACTGCAGAT...CTCGTGGGGATACTCCTCACTTCCACCCACAGTTTGGAACTGTTCACTGTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR CCA 90 bp | GCTACATTCTCCCAGTTTCACAAGGCAGACTATGTATTCAAGGCTCTGAAAACTAGGAGAGGGAGGTCCTaGATGCTCTGCCAATGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ATFSQFHKADYVFKALKTRRGRS*MLCQCR Trigger: CCTGCATTGGCAGAGCATCCAGGACCTCCCTCTCCT...AGTTTTCAGAGCCTTGAATACATAGTCTGCCTTGTGAAACTGGGAGAATGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGTGCTCAGAAGGGCTGACCAAAGAGAAGTTTCTGGTTCCCATGTTCTCCAAACCAGCTAAGACATaGTCTGCCATACAGGATACC | + |
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Preference number: 2 (lower is better) Translates to: PVCSEGLTKEKFLVPMFSKPAKT*SAIQDT Trigger: GGTATCCTGTATGGCAGACCATGTCTTAGCTGGTTT...GGAGAACATGGGAACCAGAAACTTCTCTTTGGTCAGCCCTTCTGAGCACACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGACAGTCTTTCTCCCTGTAAGAGAGAGAAAGGGAGTAAGTACCATCTGCAGGCAGGACAAGATGTaGACTGGAGATCACAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: RRTVFLPVRERKGVSTICRQDKM*TGDHSR Trigger: CCTACTGTGATCTCCAGTCCACATCTTGTCCTGCCT...GCAGATGGTACTTACTCCCTTTCTCTCTCTTACAGGGAGAAAGACTGTCCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCCCTGTAAGAGAGAGAAAGGGAGTAAGTACCATCTGCACACAGCACTGGGCTGTCATGGGAATGTaGCTCAAATGTCAACCGCAA | + |
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Preference number: 2 (lower is better) Translates to: FLPVRERKGVSTICTQHWAVMGM*LKCQPQ Trigger: TTGCGGTTGACATTTGAGCCACATTCCCATGACAGC...CCAGTGCTGTGTGCAGATGGTACTTACTCCCTTTCTCTCTCTTACAGGGAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGATACTGCTGGGGGAAAGCTaGGGGGTGCTGGTGGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: VKFYVHMLTEHAQKRIRILLGES*GVLVGK Trigger: TTTGCCCACCAGCACCCCCCAGCTTTCCCCCAGCAG...TATCCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR CAA 90 bp | TGTGAACACAAGACAGGAGAAAGACTCCCTCATTCTGGAAGCGTATaGATACACTCTCCCCAGAAGGACAGTCTTTCTCCCTGTAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: CEHKTGERLPHSGSV*IHSPQKDSLSPCKR Trigger: TCTCTTACAGGGAGAAAGACTGTCCTTCTGGGGAGAGTGTATCAATACGCTTCCAGAATGAGGGAGTCTTTCTCCTGTCTTGTGTTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR TCA 90 bp | GCACACAGTGAACAGTTCCAAACTGTGGGTGGAAGTGAGGAGTATCCCCACGAGTGCACTAGATATACATaGTCAAAAGGGTTTCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: AHSEQFQTVGGSEEYPHECTRYT*SKGFLS Trigger: TGACAGAAACCCTTTTGATCATGTATATCTAGTGCA...CTCGTGGGGATACTCCTCACTTCCACCCACAGTTTGGAACTGTTCACTGTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTATCATCAGAACTATGTACAGCATCTGCTACGTACCCGGACACTGGCTGAATAGGTTTGGGCATTaGTCAGCAAGGAACAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SLIIRTMYSICYVPGHWLNRFGH*SARNRK Trigger: TTTCCTGTTCCTTGCTGATCAATGCCCAAACCTATT...CAGCCAGTGTCCGGGTACGTAGCAGATGCTGTACATAGTTCTGATGATAAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGACTCCCTCATTCTGGAAGCGTATTGATACACTCTCCCCAGAAGGACAGATGTATTCAAGGCTCTaGAAACTCCTGCAGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: RKTPSFWKRIDTLSPEGQMYSRL*KLLQTG Trigger: TCCTGTCTGCAGGAGTTTTCAGAGCCTTGAATACAT...CTGTCCTTCTGGGGAGAGTGTATCAATACGCTTCCAGAATGAGGGAGTCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGGAACAGGAAAGAGCAAATTTCCAACCTTCTGGAGGAGAGGGAGGTCCTACTCAATGTGCTATCTaGAGTCAAGCCTGGAGAATA | + |
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Preference number: 2 (lower is better) Translates to: SKEQERANFQPSGGEGGPTQCAI*SQAWRI Trigger: TATTCTCCAGGCTTGACTGCAGATAGCACATTGAGT...AGGACCTCCCTCTCCTCCAGAAGGTTGGAAATTTGCTCTTTCCTGTTCCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR GCA 90 bp | AAACACAAAAAGCAAAATTTACAGCCTACCAGCTCCCTTATCATCAGAACTATGTGGAGGGTGGGCATGTaGCTGTGGGTACCAACACTC | + |
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Preference number: 2 (lower is better) Translates to: KHKKQNLQPTSSLIIRTMWRVGM*LWVPTL Trigger: GAGTGTTGGTACCCACAGGCACATGCCCACCCTCCA...CATAGTTCTGATGATAAGGGAGCTGGTAGGCTGTAAATTTTGCTTTTTGTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGCCCAGAAATGCTACATTCTCCCAGTTTCACAAGGCAGACTATGTATTCGGTTCACTGTTGAGCTaGATGCCCTGTGTTCACATA | + |
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Preference number: 2 (lower is better) Translates to: MQPRNATFSQFHKADYVFGSLLS*MPCVHI Trigger: TATGTGAACACAGGGCATCCAGCTCAACAGTGAACC...GAATACATAGTCTGCCTTGTGAAACTGGGAGAATGTAGCATTTCTGGGCTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGATATGCCAATGCAGGACATaGAGGGTGGGCATGTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: VKFYVHMLTEHAQKRIRICQCRT*RVGMCL Trigger: CAGGCACATGCCCACCCTCCATGTCCTGCATTGGCA...TATCCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCTCCCTTATCATCAGAACTATGTACAGCATCTGCTACGTACCCGGACACTTTAGACTTTATGGAATaGAGTTTGTGGACTTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: PAPLSSELCTASATYPDTLDFME*SLWTSP Trigger: TGGTGAAGTCCACAAACTGCATTCCATAAAGTCTAA...AGTGTCCGGGTACGTAGCAGATGCTGTACATAGTTCTGATGATAAGGGAGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACACAAAAAGCAAAATTTACAGCCTACCAGCTCCCTTATCATCAGAACTATGAGGTCCTGGATGCTCTaGCAATGCAGGACATGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KHKKQNLQPTSSLIIRTMRSWML*QCRTWR Trigger: CCTCCATGTCCTGCATTGGCAGAGCATCCAGGACCT...CATAGTTCTGATGATAAGGGAGCTGGTAGGCTGTAAATTTTGCTTTTTGTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGATTTCCAAGCACATTTCACCAATGGATGTCTTTAGCCAGGAACACAGAAGGCTCTGAAAACTCCTaGAGACAGGAACCTGACTTA | + |
|
Preference number: 2 (lower is better) Translates to: LGFPSTFHQWMSLARNTEGSENS*RQEPDL Trigger: TAAGTCAGGTTCCTGTCTGCAGGAGTTTTCAGAGCC...TTCTGTGTTCCTGGCTAAAGACATCCATTGGTGAAATGTGCTTGGAAATCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGATACCGCAGCTGTCACCATaGGATTCTACACACGGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: VKFYVHMLTEHAQKRIRIPQLSP*DSTHGQ Trigger: CTGACCGTGTGTAGAATCCCATGGTGACAGCTGCGG...TATCCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGATATACGTACCCGGACACTaGCTGTCATGGGAATGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: VKFYVHMLTEHAQKRIRIYVPGH*LSWECG Trigger: GCCACATTCCCATGACAGCCAGTGTCCGGGTACGTA...TATCCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CCA 90 bp | GATGTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGGTGTATGTATACGTATaGAGGAGGCCTGGGCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: DVKFYVHMLTEHAQKRIRVYVYV*RRPGQR Trigger: CCTCTGCCCAGGCCTCCTCCATACGTATACATACAC...CCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CAA 90 bp | TGCATTTCTTTACTACAAGGGACTTTGGGGTTGCTAGCAATCGGTTaGAACCAGTCTCATCCCTGTTTCTTAGTGCAAGGACAATTGACT | + |
|
Preference number: 2 (lower is better) Translates to: CISLLQGTLGLLAIG*NQSHPCFLVQGQLT Trigger: AGTCAATTGTCCTTGCACTAAGAAACAGGGATGAGACTGGTTCAAACCGATTGCTAGCAACCCCAAAGTCCCTTGTAGTAAAGAAATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CCA 90 bp | GATGTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGCGAGGGGAGAGAAATTaGGGAAGGTACCTGCGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: DVKFYVHMLTEHAQKRIRRGERN*GRYLRF Trigger: AAAACGCAGGTACCTTCCCCAATTTCTCTCCCCTCG...CCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CAA 90 bp | TTTATGGAATGCAGTTTGTGGACTTCACCAGAACACAAGGACACCTaGGAGACAGTGTTGCAGTATCCACTTCTAAAAACAGGGATATTC | + |
|
Preference number: 2 (lower is better) Translates to: FMECSLWTSPEHKDT*ETVLQYPLLKTGIF Trigger: GAATATCCCTGTTTTTAGAAGTGGATACTGCAACACTGTCTCCAAGGTGTCCTTGTGTTCTGGTGAAGTCCACAAACTGCATTCCATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGATACTCAGGCAGCCACTCTaGCTCACATTTCTCTCACAT | + |
|
Preference number: 2 (lower is better) Translates to: VKFYVHMLTEHAQKRIRILRQPL*LTFLSH Trigger: ATGTGAGAGAAATGTGAGCCAGAGTGGCTGCCTGAG...TATCCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTACATTCTCCCAGTTTCACAAGGCAGACTATGTATTCAAGGCTCTGAAAACTGCTTGGAGAATATTGTaGCTTATAGGCTTCTACTAT | + |
|
Preference number: 2 (lower is better) Translates to: ATFSQFHKADYVFKALKTAWRIL*LIGFYY Trigger: ATAGTAGAAGCCTATAAGCCACAATATTCTCCAAGC...AGTTTTCAGAGCCTTGAATACATAGTCTGCCTTGTGAAACTGGGAGAATGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR GCA 72 bp | CCAACCTTCTGGAGGAGAGGGAGGTCCTGGATGCTCTaGCAATGCAGGACATGGAGGGTGGGCATGTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PTFWRRGRSWML*QCRTWRVGMCL Trigger: CAGGCACATGCCCACCCTCCATGTCCTGCATTGGCAGAGCATCCAGGACCTCCCTCTCCTCCAGAAGGTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR GCA 72 bp | AGCCATAGCCAGCGAAGCACAGACTGTACTCTCCTCTaGACAGACAGGAGCAGGCTGCTGCCACAGACCACG | + |
|
Preference number: 3 (lower is better) Translates to: SHSQRSTDCTLL*TDRSRLLPQTT Trigger: CGTGGTCTGTGGCAGCAGCCTGCTCCTGTCTGTGCAGAGGAGAGTACAGTCTGTGCTTCGCTGGCTATGGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | AGAGGGAGGTCCTGGATGCTCTGCCAATGCAGGACATaGAGGGTGGGCATGTGCCTGTGGGTACCAACACTC | + |
|
Preference number: 3 (lower is better) Translates to: RGRSWMLCQCRT*RVGMCLWVPTL Trigger: GAGTGTTGGTACCCACAGGCACATGCCCACCCTCCATGTCCTGCATTGGCAGAGCATCCAGGACCTCCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | GGTCCTGGATGCTCTGCCAATGCAGGACATGGAGGGTaGGCATGTGCCTGTGGGTACCAACACTCCACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GPGCSANAGHGG*ACACGYQHSTF Trigger: AAAGGTGGAGTGTTGGTACCCACAGGCACATGCCCACCCTCCATGTCCTGCATTGGCAGAGCATCCAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | TCCCTCCGCTGTGCTTGGAGGGACGGGATCACTCTCTaGGGCAGTATCCAGATGAAGACACCCCAACTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLRCAWRDGITL*GSIQMKTPQLG Trigger: ACCTAGTTGGGGTGTCTTCATCTGGATACTGCCCCAGAGAGTGATCCCGTCCCTCCAAGCACAGCGGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | GCTGCACCTTTGAACAGTGGCTCAGAGCTGGGACGCTaGCAGCTCCCCTTTCTAGCTAAGCACAAGAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: AAPLNSGSELGR*QLPFLAKHKRH Trigger: ATGCCTCTTGTGCTTAGCTAGAAAGGGGAGCTGCCAGCGTCCCAGCTCTGAGCCACTGTTCAAAGGTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | AGTCCTGCTGACAAAGAGGTGGGCCAGGATGGGACATaGGTACCAGGAGTGCACAGGCTTGGGCAATTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SPADKEVGQDGT*VPGVHRLGQFV Trigger: CACAAATTGCCCAAGCCTGTGCACTCCTGGTACCCATGTCCCATCCTGGCCCACCTCTTTGTCAGCAGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR GCA 72 bp | AATTTCCAACCTTCTGGAGGAGAGGGAGGTCCTGGATaGTCTGCCAATGCAGGACATGGAGGGTGGGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: NFQPSGGEGGPG*SANAGHGGWAC Trigger: ACATGCCCACCCTCCATGTCCTGCATTGGCAGAGCATCCAGGACCTCCCTCTCCTCCAGAAGGTTGGAAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | TACCTAGTCCTAAAACACAGCTGCACCTTTGAACAGTaGCTCAGAGCTGGGACGCTGGCAGCTCCCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: YLVLKHSCTFEQ*LRAGTLAAPLS Trigger: AGAAAGGGGAGCTGCCAGCGTCCCAGCTCTGAGCCACTGTTCAAAGGTGCAGCTGTGTTTTAGGACTAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTGTGCTCAGAAGGGCTGACCAAAGAGAAGTTTCTGGTTCCCATGTTCTCCAACACAGCTGCACCTTaGAACAGTGGCTCAGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PVCSEGLTKEKFLVPMFSNTAAP*NSGSEL Trigger: CAGCTCTGAGCCACTGTTCAAAGGTGCAGCTGTGTT...GGAGAACATGGGAACCAGAAACTTCTCTTTGGTCAGCCCTTCTGAGCACACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR GCA 72 bp | TTATCACTCTGCCTGTACCTAGTCCTAAAACACAGCTaGACCTTTGAACAGTGGCTCAGAGCTGGGACGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSLCLYLVLKHS*TFEQWLRAGTL Trigger: CAGCGTCCCAGCTCTGAGCCACTGTTCAAAGGTGCAGCTGTGTTTTAGGACTAGGTACAGGCAGAGTGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | AGGACAATTGACTTCTTTCTAGCAGGGTTTCTTGAATaGCCACAGGCACACATCCCGCAGCTGTCACCATGG | + |
|
Preference number: 3 (lower is better) Translates to: RTIDFFLAGFLE*PQAHIPQLSPW Trigger: CCATGGTGACAGCTGCGGGATGTGTGCCTGTGGCCATTCAAGAAACCCTGCTAGAAAGAAGTCAATTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | AGAACTATGTACAGCATCTGCTACGTACCCGGACACTaGCTGTCATGGGAATGTGGCTCAAATGTCAACCGC | + |
|
Preference number: 3 (lower is better) Translates to: RTMYSICYVPGH*LSWECGSNVNR Trigger: GCGGTTGACATTTGAGCCACATTCCCATGACAGCCAGTGTCCGGGTACGTAGCAGATGCTGTACATAGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | GAGAGAAAGGGAGTAAGTACCATCTGCACACAGCACTaGACCACAGACGGAAGACAAACAGATGCGGACCAT | + |
|
Preference number: 3 (lower is better) Translates to: ERKGVSTICTQH*TTDGRQTDADH Trigger: ATGGTCCGCATCTGTTTGTCTTCCGTCTGTGGTCCAGTGCTGTGTGCAGATGGTACTTACTCCCTTTCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTGTGCTCAGAAGGGCTGACCAAAGAGAAGTTTCTGGTTCCCATGTTCTCCGAACACAAGGACACCTaGGAGACAGTGTTGCAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PVCSEGLTKEKFLVPMFSEHKDT*ETVLQY Trigger: ATACTGCAACACTGTCTCCAAGGTGTCCTTGTGTTC...GGAGAACATGGGAACCAGAAACTTCTCTTTGGTCAGCCCTTCTGAGCACACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGTGTGCTCAGAAGGGCTGACCAAAGAGAAGTTTCTGGTTCCCATGTTCTCCCATTCTGGAAGCGTATaGATACACTCTCCCCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PVCSEGLTKEKFLVPMFSHSGSV*IHSPQK Trigger: CTTCTGGGGAGAGTGTATCAATACGCTTCCAGAATG...GGAGAACATGGGAACCAGAAACTTCTCTTTGGTCAGCCCTTCTGAGCACACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR TCA 72 bp | CCCTCTGGACCACTTGAGAATAGTCTAAAGTCTGTGTaGGGACCAAAGGGATGGGGGTGTTGGTTCACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PSGPLENSLKSV*GPKGWGCWFTV Trigger: AACAGTGAACCAACACCCCCATCCCTTTGGTCCTCACACAGACTTTAGACTATTCTCAAGTGGTCCAGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR GCA 72 bp | CTCCCTGTAAGAGAGAGAAAGGGAGTAAGTACCATCTaGACACAGCACTGGACCACAGACGGAAGACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LPVRERKGVSTI*TQHWTTDGRQT Trigger: TGTTTGTCTTCCGTCTGTGGTCCAGTGCTGTGTGCAGATGGTACTTACTCCCTTTCTCTCTCTTACAGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR GCA 72 bp | CTCAGGAGCATTCTTGGAGCATGGGCTAAACCTGTGTaGTCAGAAGGGCTGACCAAAGAGAAGTTTCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LRSILGAWAKPV*SEGLTKEKFLV Trigger: AACCAGAAACTTCTCTTTGGTCAGCCCTTCTGAGCACACAGGTTTAGCCCATGCTCCAAGAATGCTCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | GCCAGTCTCCAAATGTATGCAGTGCACTGTTTTAAGTaGCAGGCAGGACAAGATGTGGACTGGAGATCACAG | + |
|
Preference number: 3 (lower is better) Translates to: ASLQMYAVHCFK*QAGQDVDWRSQ Trigger: CTGTGATCTCCAGTCCACATCTTGTCCTGCCTGCCACTTAAAACAGTGCACTGCATACATTTGGAGACTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | TACAGCATCTGCTACGTACCCGGACACTGGCTGTCATaGGAATGTGGCTCAAATGTCAACCGCAAAGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: YSICYVPGHWLS*ECGSNVNRKVS Trigger: TGATACTTTGCGGTTGACATTTGAGCCACATTCCCATGACAGCCAGTGTCCGGGTACGTAGCAGATGCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | AAACTCCTGAAGCACACAGTGAACAGTTCCAAACTGTaGGTGGAAGTGAGGAGTATCCCCACGAGGCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: KLLKHTVNSSKL*VEVRSIPTRPL Trigger: TAATGGCCTCGTGGGGATACTCCTCACTTCCACCCACAGTTTGGAACTGTTCACTGTGTGCTTCAGGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR TCA 72 bp | ACAAGATGTGGACTGGAGATCACAGTAGGAGGCCCTTaGGAAATGTTCCTCCCTTTCCTTAGTCAAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TRCGLEITVGGP*EMFLPFLSQGR Trigger: TCTGCCTTGACTAAGGAAAGGGAGGAACATTTCTCAAGGGCCTCCTACTGTGATCTCCAGTCCACATCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR TCA 72 bp | AGACAGGAGAAAGACTCCCTCATTCTGGAAGCGTATTaGTACACTCTCCCCAGAAGGACAGTCTTTCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RQEKDSLILEAY*YTLPRRTVFLP Trigger: AGGGAGAAAGACTGTCCTTCTGGGGAGAGTGTATCAATACGCTTCCAGAATGAGGGAGTCTTTCTCCTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | ACCAAAGAGAAGTTTCTGGTTCCCATGTTCTCCTTGTaGCTGCAGAGAAAGCCTTACTCCCAGAACCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TKEKFLVPMFSL*LQRKPYSQNQE Trigger: TTCCTGGTTCTGGGAGTAAGGCTTTCTCTGCAGCCACAAGGAGAACATGGGAACCAGAAACTTCTCTTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGATTTCCAAGCACATTTCACCAATGGATGTCTTTAGCCAGGAACACAGAAGCGAGGGGAGAGAAATaGGGGAAGGTACCTGCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LGFPSTFHQWMSLARNTEARGEK*GKVPAF Trigger: AAACGCAGGTACCTTCCCCAATTTCTCTCCCCTCGC...TTCTGTGTTCCTGGCTAAAGACATCCATTGGTGAAATGTGCTTGGAAATCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACACAGTGAACAGTTCCAAACTGTGGGTGGAAGTGAGGAGTATCCCCACGAGGTGTGGCTTTCAAATTaGAACTGTAGAAATACGCAA | + |
|
Preference number: 3 (lower is better) Translates to: AHSEQFQTVGGSEEYPHEVWLSN*NCRNTQ Trigger: TTGCGTATTTCTACAGTTCAAATTTGAAAGCCACAC...CTCGTGGGGATACTCCTCACTTCCACCCACAGTTTGGAACTGTTCACTGTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR GCA 72 bp | AAGGCCAAGGCTCCTGGTTTCACTCAATGTGCTATCTaGAGTCAAGCCTGGAGAATAGTAGATGCTCAATAC | + |
|
Preference number: 3 (lower is better) Translates to: KAKAPGFTQCAI*SQAWRIVDAQY Trigger: GTATTGAGCATCTACTATTCTCCAGGCTTGACTGCAGATAGCACATTGAGTGAAACCAGGAGCCTTGGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR GCA 72 bp | CTAAGACATGGTCTGCCATACAGGATACCTAGGTCATaGAGCCCAGAAATGCTACATTCTCCCAGTTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LRHGLPYRIPRS*SPEMLHSPSFT Trigger: TGTGAAACTGGGAGAATGTAGCATTTCTGGGCTGCATGACCTAGGTATCCTGTATGGCAGACCATGTCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR GCA 72 bp | AAGAGAAGTTTCTGGTTCCCATGTTCTCCTTGTGGCTaGAGAGAAAGCCTTACTCCCAGAACCAGGAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KRSFWFPCSPCG*RESLTPRTRKK Trigger: TTTCTTCCTGGTTCTGGGAGTAAGGCTTTCTCTGCAGCCACAAGGAGAACATGGGAACCAGAAACTTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR GCA 72 bp | TTTGTACCTGATGAGAGCAGATCAAAATCTGCCTGCTaGTGTCCAAGGGTTCAGCTGTTTCTAGAAGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FVPDESRSKSAC*CPRVQLFLEGP Trigger: AGGACCTTCTAGAAACAGCTGAACCCTTGGACAGCAGCAGGCAGATTTTGATCTGCTCTCATCAGGTACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCAGACTATGTATTCAAGGCTCTGAAAACTCCTGCAGACAGGAACCTGACACCTTGGAGACAGTGTaGCAGTATCCACTTCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QGRLCIQGSENSCRQEPDTLETV*QYPLLK Trigger: TTTTAGAAGTGGATACTGCAACACTGTCTCCAAGGT...GTCAGGTTCCTGTCTGCAGGAGTTTTCAGAGCCTTGAATACATAGTCTGCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | ACAGCAGTCCTCCATCCTTGCGCTTGGAGAATATTGTaGCTTATAGGCTTCTACTATGAAGACACTGCACTA | + |
|
Preference number: 3 (lower is better) Translates to: TAVLHPCAWRIL*LIGFYYEDTAL Trigger: TAGTGCAGTGTCTTCATAGTAGAAGCCTATAAGCCACAATATTCTCCAAGCGCAAGGATGGAGGACTGCTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR TCA 72 bp | ACTCTCATAAAGTTCCCAGATGGACACTGTTTCTGCTaGTTTGTGGAAGGATCTAGGAAGCAGCTGTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: TLIKFPDGHCFC*FVEGSRKQLSI Trigger: GATTGACAGCTGCTTCCTAGATCCTTCCACAAATCAGCAGAAACAGTGTCCATCTGGGAACTTTATGAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACACAAAAAGCAAAATTTACAGCCTACCAGCTCCCTTATCATCAGAACTATGCACAGTAGGAGGCCCTaGAGAAATGTTCCTCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KHKKQNLQPTSSLIIRTMHSRRP*RNVPPF Trigger: AAAGGGAGGAACATTTCTCAAGGGCCTCCTACTGTG...CATAGTTCTGATGATAAGGGAGCTGGTAGGCTGTAAATTTTGCTTTTTGTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CCA 72 bp | CCTGGTTTCACTCAATGTGCTATCTGCAGTCAAGCCTaGAGAATAGTAGATGCTCAATACTTATTGACTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PGFTQCAICSQA*RIVDAQYLLTR Trigger: TCTAGTCAATAAGTATTGAGCATCTACTATTCTCCAGGCTTGACTGCAGATAGCACATTGAGTGAAACCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGTTTATGGAATGCAGTTaGTGGACTTCACCAGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: DVKFYVHMLTEHAQKRIRFMECS*WTSPEH Trigger: GTGTTCTGGTGAAGTCCACAAACTGCATTCCATAAA...CCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAACATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGATAGGTTTCTGTCATTTCTaGTGTTGGGCAATGAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: VKFYVHMLTEHAQKRIRIGFCHF*CWAMNY Trigger: GTAGTTCATTGCCCAACACAAGAAATGACAGAAACC...TATCCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR TCA 72 bp | ACACTCTACAATAAACAGTCAAGCCGATACATATTTTaGAAATTGTCACTAGGAAGTGTGAACACAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: TLYNKQSSRYIF*KLSLGSVNTRQ Trigger: CTGTCTTGTGTTCACACTTCCTAGTGACAATTTTCAAAATATGTATCGGCTTGACTGTTTATTGTAGAGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTGGCTGCAGAGAAAGCCTTACTCCCAGAACCAGGAAGAAAGGGTTGTCTGGCAGGGCCTCCTGCGTaGCGTTCTTCCGCTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVAAEKALLPEPGRKGCLAGPPA*RSSAGV Trigger: GACGCCAGCGGAAGAACGCCACGCAGGAGGCCCTGC...CAGACAACCCTTTCTTCCTGGTTCTGGGAGTAAGGCTTTCTCTGCAGCCACAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR GCA 90 bp | CACAGACTGTACTCTCCTCTGCACAGACAGGAGCAGGCTGCTGCCACAGACCACTCCCGTCTCATCTGGTaGAGGATGGCAGTGTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HRLYSPLHRQEQAAATDHSRLIW*RMAVLD Trigger: ATCCAACACTGCCATCCTGCACCAGATGAGACGGGA...GTGGTCTGTGGCAGCAGCCTGCTCCTGTCTGTGCAGAGGAGAGTACAGTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR CCA 90 bp | GCACACAGTGAACAGTTCCAAACTGTGGGTGGAAGTGAGGAGTATCCCCACGAGCAGGTGTCTGTCACCTaGTCCCGTCTCATCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AHSEQFQTVGGSEEYPHEQVSVT*SRLIWC Trigger: GCACCAGATGAGACGGGACCAGGTGACAGACACCTG...CTCGTGGGGATACTCCTCACTTCCACCCACAGTTTGGAACTGTTCACTGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGACTATGTATTCAAGGCTCTGAAAACTCCTGCAGACAGGAACCTGACAAGGGCTCCTCCCGCTaGGTGTGGGGGTCGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGRLCIQGSENSCRQEPDKGSSR*VWGSMR Trigger: CCTCATCGACCCCCACACCCAGCGGGAGGAGCCCTT...GTCAGGTTCCTGTCTGCAGGAGTTTTCAGAGCCTTGAATACATAGTCTGCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGCCCAGAAATGCTACATTCTCCCAGTTTCACAAGGCAGACTATGTATTCATGGGGGTCAGCACCCTaGGCTTGCGGCTCATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSPEMLHSPSFTRQTMYSWGSAP*ACGSWH Trigger: GTGCCATGAGCCGCAAGCGCAGGGTGCTGACCCCCA...TGAATACATAGTCTGCCTTGTGAAACTGGGAGAATGTAGCATTTCTGGGCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTTTGTGGACTTCACCAGAACACAAGGACACCTTGGAGACAGTGTTGCAGTCACTCAGGACCATCATaGGCCTCTTCCAGTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVCGLHQNTRTPWRQCCSHSGPS*ASSSWC Trigger: GCACCAACTGGAAGAGGCTCATGATGGTCCTGAGTG...ACTGCAACACTGTCTCCAAGGTGTCCTTGTGTTCTGGTGAAGTCCACAAACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAGACTATGTATTCAAGGCTCTGAAAACTCCTGCAGACAGGAACCTGACTCTGGTGCTCGGCGCTaGTGTTCTGGAAGAACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QGRLCIQGSENSCRQEPDSGARR*CSGRTP Trigger: CGGAGTTCTTCCAGAACATCAGCGCCGAGCACCAGA...GTCAGGTTCCTGTCTGCAGGAGTTTTCAGAGCCTTGAATACATAGTCTGCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTCCCTGTAAGAGAGAGAAAGGGAGTAAGTACCATCTGCACACAGCACTGGTCATCCACCACCAGGTaGTTCAGGTCGTTGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLPVRERKGVSTICTQHWSSTTR*FRSLGV Trigger: GACCCCCAACGACCTGAAGCACCTGGTGGTGGATGA...CCAGTGCTGTGTGCAGATGGTACTTACTCCCTTTCTCTCTCTTACAGGGAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGACTATGTATTCAAGGCTCTGAAAACTCCTGCAGACAGGAACCTGACTGGCTGGGATCTCCATaGGATCGCTGTACTTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGRLCIQGSENSCRQEPDWLGSP*DRCTCP Trigger: GGGGCAAGTACAGCGATCCCATGGAGATCCCAGCCA...GTCAGGTTCCTGTCTGCAGGAGTTTTCAGAGCCTTGAATACATAGTCTGCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTTTGTGGACTTCACCAGAACACAAGGACACCTTGGAGACAGTGTTGCAGTACACGTGGGCTTCGTTaGCTGGGATCTCCATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVCGLHQNTRTPWRQCCSTRGLR*LGSPWD Trigger: ATCCCATGGAGATCCCAGCCAACGAAGCCCACGTGT...ACTGCAACACTGTCTCCAAGGTGTCCTTGTGTTCTGGTGAAGTCCACAAACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGACAGTCTTTCTCCCTGTAAGAGAGAGAAAGGGAGTAAGTACCATCTGCGTGGCGTTCTTCCGCTaGCGTCGGATGATCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRTVFLPVRERKGVSTICVAFFR*RRMILV Trigger: CACCAAGATCATCCGACGCCAGCGGAAGAACGCCAC...GCAGATGGTACTTACTCCCTTTCTCTCTCTTACAGGGAGAAAGACTGTCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCCCTTATCATCAGAACTATGTACAGCATCTGCTACGTACCCGGACACTTGGACTTTGCATAGGTaGGGAACTTCAGGTAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PAPLSSELCTASATYPDTWTLHR*GTSGSR Trigger: GCGGCTACCTGAAGTTCCCCACCTATGCAAAGTCCA...AGTGTCCGGGTACGTAGCAGATGCTGTACATAGTTCTGATGATAAGGGAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTGTGGCTGCAGAGAAAGCCTTACTCCCAGAACCAGGAAGAAAGGGTTTCGGCGCTGATGTTCTaGAAGAACTCCGTGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FSLWLQRKPYSQNQEERVSALMF*KNSVVI Trigger: GATGACCACGGAGTTCTTCCAGAACATCAGCGCCGA...AACCCTTTCTTCCTGGTTCTGGGAGTAAGGCTTTCTCTGCAGCCACAAGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CAA 72 bp | TGTGAGGACCAAAGGGATGGGGGTGTTGGTTCACTGTaGAGCTGGATGCCCTGTGTTCACATAAAGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CEDQRDGGVGSL*SWMPCVHIKLA Trigger: AGCAAGCTTTATGTGAACACAGGGCATCCAGCTCAACAGTGAACCAACACCCCCATCCCTTTGGTCCTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCTCCCTTATCATCAGAACTATGTACAGCATCTGCTACGTACCCGGACACTTGTTGTACTTCTGCGTaGACTTGTTGCGGTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PAPLSSELCTASATYPDTCCTSA*TCCGRQ Trigger: CTGCCTACCGCAACAAGTTCACGCAGAAGTACAACA...AGTGTCCGGGTACGTAGCAGATGCTGTACATAGTTCTGATGATAAGGGAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGATTTCCAAGCACATTTCACCAATGGATGTCTTTAGCCAGGAACACAGAATGGGATCGCTGTACTTaGCCCGGCCACTCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGFPSTFHQWMSLARNTEWDRCT*PGHSGP Trigger: TGGTCCTGAGTGGCCGGGGCAAGTACAGCGATCCCA...TTCTGTGTTCCTGGCTAAAGACATCCATTGGTGAAATGTGCTTGGAAATCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTGTGGCTGCAGAGAAAGCCTTACTCCCAGAACCAGGAAGAAAGGGTTAGTTCGGGTGGACTTTaGATAGGTGGGGAACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSLWLQRKPYSQNQEERVSSGGL*IGGELQ Trigger: CTGAAGTTCCCCACCTATGCAAAGTCCACCCGAACT...AACCCTTTCTTCCTGGTTCTGGGAGTAAGGCTTTCTCTGCAGCCACAAGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCCCTTATCATCAGAACTATGTACAGCATCTGCTACGTACCCGGACACTTCATCTGGTGCAGGATaGCAGTGTTGGATAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAPLSSELCTASATYPDTSSGAG*QCWIAP Trigger: TGGAGCTATCCAACACTGCCATCCTGCACCAGATGA...AGTGTCCGGGTACGTAGCAGATGCTGTACATAGTTCTGATGATAAGGGAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCAGTTTCACAAGGCAGACTATGTATTCAAGGCTCTGAAAACTCCTGCAGTGGGCTTCGTTGGCTaGGATCTCCATGGGATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSQFHKADYVFKALKTPAVGFVG*DLHGIA Trigger: AGCGATCCCATGGAGATCCCAGCCAACGAAGCCCAC...TGCAGGAGTTTTCAGAGCCTTGAATACATAGTCTGCCTTGTGAAACTGGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR TCA 90 bp | GCTACATTCTCCCAGTTTCACAAGGCAGACTATGTATTCAAGGCTCTGAAAACTCGAACTCCTCGAACTTaGCATCGTCCCCCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ATFSQFHKADYVFKALKTRTPRT*HRPPCA Trigger: TGCGCAAGGGGGACGATGTCAAGTTCGAGGAGTTCG...AGTTTTCAGAGCCTTGAATACATAGTCTGCCTTGTGAAACTGGGAGAATGTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR GCA 90 bp | GTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGATATTGCGCAGGGCCTCCTaGGTGGCGTTCTTCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKFYVHMLTEHAQKRIRILRRAS*VAFFRW Trigger: CCAGCGGAAGAACGCCACGCAGGAGGCCCTGCGCAA...TATCCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCAGTTTCACAAGGCAGACTATGTATTCAAGGCTCTGAAAACTCCTGCAAGGATCCGAAGCAAGTaGCCAGCACCATCCGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSQFHKADYVFKALKTPARIRSK*PAPSGK Trigger: TTTGCCGGATGGTGCTGGCCACTTGCTTCGGATCCT...TGCAGGAGTTTTCAGAGCCTTGAATACATAGTCTGCCTTGTGAAACTGGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| 3UTR CAA 72 bp | AAGACAGGAGAAAGACTCCCTCATTCTGGAAGCGTATaGATACACTCTCCCCAGAAGGACAGTCTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KTGERLPHSGSV*IHSPQKDSLSP Trigger: GGGAGAAAGACTGTCCTTCTGGGGAGAGTGTATCAATACGCTTCCAGAATGAGGGAGTCTTTCTCCTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR TCA 90 bp | TTTCTCCCTGTAAGAGAGAGAAAGGGAGTAAGTACCATCTGCACACAGCACTGGTTTTCAAGCGGTGGTTaGTCTCTGGGATGCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: FLPVRERKGVSTICTQHWFSSGG*SLGCCT Trigger: AGTACAGCATCCCAGAGATCAACCACCGCTTGAAAA...CCAGTGCTGTGTGCAGATGGTACTTACTCCCTTTCTCTCTCTTACAGGGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR TCA 90 bp | GTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGATATCCGCTGGCGTCGGATaGTCTTGGTGCCGTAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VKFYVHMLTEHAQKRIRISAGVG*SWCRSA Trigger: AGCGCTACGGCACCAAGATCATCCGACGCCAGCGGA...TATCCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR GCA 90 bp | GCTACATTCTCCCAGTTTCACAAGGCAGACTATGTATTCAAGGCTCTGAAAACTTACAGCTGTGTCTGGTaGTCGGCGCTGATGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATFSQFHKADYVFKALKTYSCVW*SALMFW Trigger: CCAGAACATCAGCGCCGAGCACCAGACACAGCTGTA...AGTTTTCAGAGCCTTGAATACATAGTCTGCCTTGTGAAACTGGGAGAATGTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR CCA 90 bp | AAACACAAAAAGCAAAATTTACAGCCTACCAGCTCCCTTATCATCAGAACTATGGGTGCTTCAGGTCGTTaGGGGTCAGCACCCTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KHKKQNLQPTSSLIIRTMGASGR*GSAPCA Trigger: AGCGCAGGGTGCTGACCCCCAACGACCTGAAGCACC...CATAGTTCTGATGATAAGGGAGCTGGTAGGCTGTAAATTTTGCTTTTTGTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR TCA 90 bp | GCTACATTCTCCCAGTTTCACAAGGCAGACTATGTATTCAAGGCTCTGAAAACTGCACATAGCAGTAGATaGGTTCGTGGTCCTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATFSQFHKADYVFKALKTAHSSR*VRGPHP Trigger: TGGATGAGGACCACGAACTCATCTACTGCTATGTGC...AGTTTTCAGAGCCTTGAATACATAGTCTGCCTTGTGAAACTGGGAGAATGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGCCCAGAAATGCTACATTCTCCCAGTTTCACAAGGCAGACTATGTATTCGTTCCTCCGCATGACTaGGTGCAACATACTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MQPRNATFSQFHKADYVFVPPHD*VQHTLE Trigger: TTCCAAAGTATGTTGCACCCAGTCATGCGGAGGAAC...GAATACATAGTCTGCCTTGTGAAACTGGGAGAATGTAGCATTTCTGGGCTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR CCA 90 bp | GATGTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGTCGTACAGCTGTGTCTaGTGCTCGGCGCTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DVKFYVHMLTEHAQKRIRSYSCV*CSALMF Trigger: GAACATCAGCGCCGAGCACCAGACACAGCTGTACGA...CCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CAA 72 bp | ATCACAGCAGTCCTCCATCCTTGCGCTTGGAGAATATaGTGGCTTATAGGCTTCTACTATGAAGACACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ITAVLHPCAWRI*WLIGFYYEDTA Trigger: TGCAGTGTCTTCATAGTAGAAGCCTATAAGCCACAATATTCTCCAAGCGCAAGGATGGAGGACTGCTGTGAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CAA 72 bp | CAGACATCACTAATCAATCACAGCAGTCCTCCATCCTaGCGCTTGGAGAATATTGTGGCTTATAGGCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QTSLINHSSPPS*RLENIVAYRLL Trigger: TAGAAGCCTATAAGCCACAATATTCTCCAAGCGCAAGGATGGAGGACTGCTGTGATTGATTAGTGATGTCTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCCCTGTAAGAGAGAGAAAGGGAGTAAGTACCATCTGCACACAGCACTGGTTGGCACTGAGTAGTTaGACATTAAAAAGTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLPVRERKGVSTICTQHWLALSS*TLKSPV Trigger: AACTGGACTTTTTAATGTTCAACTACTCAGTGCCAA...CCAGTGCTGTGTGCAGATGGTACTTACTCCCTTTCTCTCTCTTACAGGGAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR CCA 90 bp | GATGTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGTCTGGGATGCTGTACTaGTTAAGGGTCTTCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DVKFYVHMLTEHAQKRIRSGMLY*LRVFRL Trigger: CAACCTGAAGACCCTTAACCAGTACAGCATCCCAGA...CCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS-3UTR CCA 90 bp | AAACACAAAAAGCAAAATTTACAGCCTACCAGCTCCCTTATCATCAGAACTATGGCTGCAGTACGTAATTaGAGTCCTCCTCCAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KHKKQNLQPTSSLIIRTMAAVRN*SPPPVS Trigger: AGACACTGGAGGAGGACTCCAATTACGTACTGCAGC...CATAGTTCTGATGATAAGGGAGCTGGTAGGCTGTAAATTTTGCTTTTTGTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| 3UTR CAA 72 bp | AAAATTTGCATTTCTTTACTACAAGGGACTTTGGGGTaGCTAGCAATCGGTTTGAACCAGTCTCATCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KICISLLQGTLG*LAIGLNQSHPC Trigger: ACAGGGATGAGACTGGTTCAAACCGATTGCTAGCAACCCCAAAGTCCCTTGTAGTAAAGAAATGCAAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS GCA 90 bp | CCACCACCAGGTGCTTCAGGTCGTTGGGGGTCAGCACCCTGCGCTTaGGGCTCATGGCACTGTTGGCCCGGCAGGTGTCTGTCACCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPPGASGRWGSAPCA*GSWHCWPGRCLSPG Trigger: ACCAGGTGACAGACACCTGCCGGGCCAACAGTGCCATGAGCCGCAAGCGCAGGGTGCTGACCCCCAACGACCTGAAGCACCTGGTGGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS CCA 90 bp | GGTCGTTGGGGGTCAGCACCCTGCGCTTGCGGCTCATGGCACTGTTaGCCCGGCAGGTGTCTGTCACCTGGTCCCGTCTCATCTGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRWGSAPCACGSWHC*PGRCLSPGPVSSGA Trigger: TGCACCAGATGAGACGGGACCAGGTGACAGACACCTGCCGGGCCAACAGTGCCATGAGCCGCAAGCGCAGGGTGCTGACCCCCAACGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS CCA 90 bp | GGTGCTTCAGGTCGTTGGGGGTCAGCACCCTGCGCTTGCGGCTCATaGCACTGTTGGCCCGGCAGGTGTCTGTCACCTGGTCCCGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GASGRWGSAPCACGS*HCWPGRCLSPGPVS Trigger: TGAGACGGGACCAGGTGACAGACACCTGCCGGGCCAACAGTGCCATGAGCCGCAAGCGCAGGGTGCTGACCCCCAACGACCTGAAGCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS GCA 90 bp | CCTCATCCACCACCAGGTGCTTCAGGTCGTTGGGGGTCAGCACCCTaGGCTTGCGGCTCATGGCACTGTTGGCCCGGCAGGTGTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PHPPPGASGRWGSAP*ACGSWHCWPGRCLS Trigger: TGACAGACACCTGCCGGGCCAACAGTGCCATGAGCCGCAAGCGCAGGGTGCTGACCCCCAACGACCTGAAGCACCTGGTGGTGGATGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS TCA 90 bp | CCTTGCGCAGGGCCTCCTGCGTGGCGTTCTTCCGCTGGCGTCGGATaGTCTTGGTGCCGTAGCGCTTGTGGAAGGAGGTGTTGTACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PCAGPPAWRSSAGVG*SWCRSACGRRCCTS Trigger: AGAAGTACAACACCTCCTTCCACAAGCGCTACGGCACCAAGATCATCCGACGCCAGCGGAAGAACGCCACGCAGGAGGCCCTGCGCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS CCA 90 bp | CTGGTTAAGGGTCTTCAGGTTGGCCGACACGTGGGCTTCGTTGGCTaGGATCTCCATGGGATCGCTGTACTTGCCCCGGCCACTCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LVKGLQVGRHVGFVG*DLHGIAVLAPATQD Trigger: GTCCTGAGTGGCCGGGGCAAGTACAGCGATCCCATGGAGATCCCAGCCAACGAAGCCCACGTGTCGGCCAACCTGAAGACCCTTAACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS CCA 90 bp | GCACTGTTGGCCCGGCAGGTGTCTGTCACCTGGTCCCGTCTCATCTaGTGCAGGATGGCAGTGTTGGATAGCTCCAGCTGGATGGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLARQVSVTWSRLI*CRMAVLDSSSWMGL Trigger: CAATCCCATCCAGCTGGAGCTATCCAACACTGCCATCCTGCACCAGATGAGACGGGACCAGGTGACAGACACCTGCCGGGCCAACAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS GCA 90 bp | CTGGAAGAACTCCGTGGTCATCTCGTCGGTAGTTCGGGTGGACTTTaGATAGGTGGGGAACTTCAGGTAGCCGCTCACTCCGGCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LEELRGHLVGSSGGL*IGGELQVAAHSGQL Trigger: CAGCTGGCCGGAGTGAGCGGCTACCTGAAGTTCCCCACCTATGCAAAGTCCACCCGAACTACCGACGAGATGACCACGGAGTTCTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
||
| CDS CCA 90 bp | CCCGGCAGGTGTCTGTCACCTGGTCCCGTCTCATCTGGTGCAGGATaGCAGTGTTGGATAGCTCCAGCTGGATGGGATTGTAGAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PGRCLSPGPVSSGAG*QCWIAPAGWDCRAP Trigger: AGGAGCTCTACAATCCCATCCAGCTGGAGCTATCCAACACTGCCATCCTGCACCAGATGAGACGGGACCAGGTGACAGACACCTGCCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CCA 90 bp | TCTGGGATGCTGTACTGGTTAAGGGTCTTCAGGTTGGCCGACACGTaGGCTTCGTTGGCTGGGATCTCCATGGGATCGCTGTACTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: SGMLYWLRVFRLADT*ASLAGISMGSLYLP Trigger: GGGCAAGTACAGCGATCCCATGGAGATCCCAGCCAACGAAGCCCACGTGTCGGCCAACCTGAAGACCCTTAACCAGTACAGCATCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR CAA 90 bp | TCCCTTATCATCAGAACTATGTACAGCATCTGCTACGTACCCGGACACTGGCTGGTCAGCACCCTGCGCTaGCGGCTCATGGCACTGTTG | + |
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Preference number: 5 (lower is better) Translates to: SLIIRTMYSICYVPGHWLVSTLR*RLMALL Trigger: CAACAGTGCCATGAGCCGCAAGCGCAGGGTGCTGAC...CAGCCAGTGTCCGGGTACGTAGCAGATGCTGTACATAGTTCTGATGATAAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR CAA 90 bp | AGAAAGACTCCCTCATTCTGGAAGCGTATTGATACACTCTCCCCAGAAGGACAGAGGTGCTTCAGGTCGTaGGGGGTCAGCACCCTGCGC | + |
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Preference number: 5 (lower is better) Translates to: RKTPSFWKRIDTLSPEGQRCFRS*GVSTLR Trigger: GCGCAGGGTGCTGACCCCCAACGACCTGAAGCACCT...CTGTCCTTCTGGGGAGAGTGTATCAATACGCTTCCAGAATGAGGGAGTCTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR CAA 90 bp | AGCAAGGAACAGGAAAGAGCAAATTTCCAACCTTCTGGAGGAGAGGGAGGTCCTGACACGTGGGCTTCGTaGGCTGGGATCTCCATGGGA | + |
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Preference number: 5 (lower is better) Translates to: SKEQERANFQPSGGEGGPDTWAS*AGISMG Trigger: TCCCATGGAGATCCCAGCCAACGAAGCCCACGTGTC...AGGACCTCCCTCTCCTCCAGAAGGTTGGAAATTTGCTCTTTCCTGTTCCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR CAA 90 bp | CACAGACTGTACTCTCCTCTGCACAGACAGGAGCAGGCTGCTGCCACAGACCACTTGTGGAAGGAGGTGTaGTACTTCTGCGTGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: HRLYSPLHRQEQAAATDHLWKEV*YFCVNL Trigger: CAAGTTCACGCAGAAGTACAACACCTCCTTCCACAA...GTGGTCTGTGGCAGCAGCCTGCTCCTGTCTGTGCAGAGGAGAGTACAGTCTGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR CAA 90 bp | AGCAAGGAACAGGAAAGAGCAAATTTCCAACCTTCTGGAGGAGAGGGAGGTCCTATGAGCCTCTTCCAGTaGGTGCACGCTACCTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SKEQERANFQPSGGEGGPMSLFQ*VHATLG Trigger: GCCCAAGGTAGCGTGCACCAACTGGAAGAGGCTCAT...AGGACCTCCCTCTCCTCCAGAAGGTTGGAAATTTGCTCTTTCCTGTTCCTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CCA 90 bp | CACGAACAGGAACTTCATGTAGCTTTTCAAGCGGTGGTTGATCTCTaGGATGCTGTACTGGTTAAGGGTCTTCAGGTTGGCCGACACGTG | + |
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Preference number: 5 (lower is better) Translates to: HEQELHVAFQAVVDL*DAVLVKGLQVGRHV Trigger: CACGTGTCGGCCAACCTGAAGACCCTTAACCAGTACAGCATCCCAGAGATCAACCACCGCTTGAAAAGCTACATGAAGTTCCTGTTCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR CAA 90 bp | GCTACATTCTCCCAGTTTCACAAGGCAGACTATGTATTCAAGGCTCTGAAAACTTTAAGGGTCTTCAGGTaGGCCGACACGTGGGCTTCG | + |
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Preference number: 5 (lower is better) Translates to: ATFSQFHKADYVFKALKTLRVFR*ADTWAS Trigger: CGAAGCCCACGTGTCGGCCAACCTGAAGACCCTTAA...AGTTTTCAGAGCCTTGAATACATAGTCTGCCTTGTGAAACTGGGAGAATGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR CAA 90 bp | GTTAAATTCTATGTCCATATGCTTACTGAGCATGCTCAGAAGAGAATACGGATATTGACATCGTCCCCCTaGCGCAGGGCCTCCTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: VKFYVHMLTEHAQKRIRILTSSP*RRASCV Trigger: CACGCAGGAGGCCCTGCGCAAGGGGGACGATGTCAA...TATCCGTATTCTCTTCTGAGCATGCTCAGTAAGCATATGGACATAGAATTTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR CAA 90 bp | GCTACATTCTCCCAGTTTCACAAGGCAGACTATGTATTCAAGGCTCTGAAAACTACGAACTCCTCGAACTaGACATCGTCCCCCTTGCGC | + |
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Preference number: 5 (lower is better) Translates to: ATFSQFHKADYVFKALKTTNSSN*TSSPLR Trigger: GCGCAAGGGGGACGATGTCAAGTTCGAGGAGTTCGT...AGTTTTCAGAGCCTTGAATACATAGTCTGCCTTGTGAAACTGGGAGAATGTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS-3UTR CAA 90 bp | TGCAGCCCAGAAATGCTACATTCTCCCAGTTTCACAAGGCAGACTATGTATTCACTTTTCAAGCGGTGGTaGATCTCTGGGATGCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: CSPEMLHSPSFTRQTMYSLFKRW*ISGMLY Trigger: GTACAGCATCCCAGAGATCAACCACCGCTTGAAAAG...TGAATACATAGTCTGCCTTGTGAAACTGGGAGAATGTAGCATTTCTGGGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS GCA 72 bp | CCACCAGGTGCTTCAGGTCGTTGGGGGTCAGCACCCTaGGCTTGCGGCTCATGGCACTGTTGGCCCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PPGASGRWGSAP*ACGSWHCWPGR Trigger: CCTGCCGGGCCAACAGTGCCATGAGCCGCAAGCGCAGGGTGCTGACCCCCAACGACCTGAAGCACCTGGTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CCA 72 bp | GGTCGTTGGGGGTCAGCACCCTGCGCTTGCGGCTCATaGCACTGTTGGCCCGGCAGGTGTCTGTCACCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GRWGSAPCACGS*HCWPGRCLSPG Trigger: ACCAGGTGACAGACACCTGCCGGGCCAACAGTGCCATGAGCCGCAAGCGCAGGGTGCTGACCCCCAACGACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CAA 90 bp | AGGTCGTTGGGGGTCAGCACCCTGCGCTTGCGGCTCATGGCACTGTaGGCCCGGCAGGTGTCTGTCACCTGGTCCCGTCTCATCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: RSLGVSTLRLRLMAL*ARQVSVTWSRLIWC Trigger: GCACCAGATGAGACGGGACCAGGTGACAGACACCTGCCGGGCCAACAGTGCCATGAGCCGCAAGCGCAGGGTGCTGACCCCCAACGACCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CAA 90 bp | TCCACCACCAGGTGCTTCAGGTCGTTGGGGGTCAGCACCCTGCGCTaGCGGCTCATGGCACTGTTGGCCCGGCAGGTGTCTGTCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: STTRCFRSLGVSTLR*RLMALLARQVSVTW Trigger: CCAGGTGACAGACACCTGCCGGGCCAACAGTGCCATGAGCCGCAAGCGCAGGGTGCTGACCCCCAACGACCTGAAGCACCTGGTGGTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CCA 72 bp | CGTGGTCCTCATCCACCACCAGGTGCTTCAGGTCGTTaGGGGTCAGCACCCTGCGCTTGCGGCTCATGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RGPHPPPGASGR*GSAPCACGSWH Trigger: GTGCCATGAGCCGCAAGCGCAGGGTGCTGACCCCCAACGACCTGAAGCACCTGGTGGTGGATGAGGACCACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS TCA 72 bp | GGGCCTCCTGCGTGGCGTTCTTCCGCTGGCGTCGGATaGTCTTGGTGCCGTAGCGCTTGTGGAAGGAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GPPAWRSSAGVG*SWCRSACGRRC Trigger: ACACCTCCTTCCACAAGCGCTACGGCACCAAGATCATCCGACGCCAGCGGAAGAACGCCACGCAGGAGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CCA 72 bp | TGGCCGACACGTGGGCTTCGTTGGCTGGGATCTCCATaGGATCGCTGTACTTGCCCCGGCCACTCAGGACCA | + |
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Preference number: 6 (lower is better) Translates to: WPTRGLRWLGSP*DRCTCPGHSGP Trigger: TGGTCCTGAGTGGCCGGGGCAAGTACAGCGATCCCATGGAGATCCCAGCCAACGAAGCCCACGTGTCGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CCA 72 bp | GGTCTTCAGGTTGGCCGACACGTGGGCTTCGTTGGCTaGGATCTCCATGGGATCGCTGTACTTGCCCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: GLQVGRHVGFVG*DLHGIAVLAPA Trigger: GGCCGGGGCAAGTACAGCGATCCCATGGAGATCCCAGCCAACGAAGCCCACGTGTCGGCCAACCTGAAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CAA 72 bp | TCGTGGTCCTCATCCACCACCAGGTGCTTCAGGTCGTaGGGGGTCAGCACCCTGCGCTTGCGGCTCATGGCA | + |
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Preference number: 6 (lower is better) Translates to: SWSSSTTRCFRS*GVSTLRLRLMA Trigger: TGCCATGAGCCGCAAGCGCAGGGTGCTGACCCCCAACGACCTGAAGCACCTGGTGGTGGATGAGGACCACGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS GCA 72 bp | TCGAACTTGACATCGTCCCCCTTGCGCAGGGCCTCCTaGGTGGCGTTCTTCCGCTGGCGTCGGATGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: SNLTSSPLRRAS*VAFFRWRRMIL Trigger: CAAGATCATCCGACGCCAGCGGAAGAACGCCACGCAGGAGGCCCTGCGCAAGGGGGACGATGTCAAGTTCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CCA 72 bp | CTCATGGCACTGTTGGCCCGGCAGGTGTCTGTCACCTaGTCCCGTCTCATCTGGTGCAGGATGGCAGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: LMALLARQVSVT*SRLIWCRMAVL Trigger: CAACACTGCCATCCTGCACCAGATGAGACGGGACCAGGTGACAGACACCTGCCGGGCCAACAGTGCCATGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CAA 90 bp | GACACGTGGGCTTCGTTGGCTGGGATCTCCATGGGATCGCTGTACTaGCCCCGGCCACTCAGGACCATCATGAGCCTCTTCCAGTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: DTWASLAGISMGSLY*PRPLRTIMSLFQLV Trigger: CACCAACTGGAAGAGGCTCATGATGGTCCTGAGTGGCCGGGGCAAGTACAGCGATCCCATGGAGATCCCAGCCAACGAAGCCCACGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CAA 90 bp | CTGTACTGGTTAAGGGTCTTCAGGTTGGCCGACACGTGGGCTTCGTaGGCTGGGATCTCCATGGGATCGCTGTACTTGCCCCGGCCACTC | + |
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Preference number: 6 (lower is better) Translates to: LYWLRVFRLADTWAS*AGISMGSLYLPRPL Trigger: GAGTGGCCGGGGCAAGTACAGCGATCCCATGGAGATCCCAGCCAACGAAGCCCACGTGTCGGCCAACCTGAAGACCCTTAACCAGTACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS GCA 72 bp | CGGCAGGTGTCTGTCACCTGGTCCCGTCTCATCTGGTaGAGGATGGCAGTGTTGGATAGCTCCAGCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: RQVSVTWSRLIW*RMAVLDSSSWM Trigger: CATCCAGCTGGAGCTATCCAACACTGCCATCCTGCACCAGATGAGACGGGACCAGGTGACAGACACCTGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CAA 72 bp | GCTTCGTTGGCTGGGATCTCCATGGGATCGCTGTACTaGCCCCGGCCACTCAGGACCATCATGAGCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ASLAGISMGSLY*PRPLRTIMSLF Trigger: GAAGAGGCTCATGATGGTCCTGAGTGGCCGGGGCAAGTACAGCGATCCCATGGAGATCCCAGCCAACGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CAA 90 bp | CGGTGGTTGATCTCTGGGATGCTGTACTGGTTAAGGGTCTTCAGGTaGGCCGACACGTGGGCTTCGTTGGCTGGGATCTCCATGGGATCG | + |
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Preference number: 6 (lower is better) Translates to: RWLISGMLYWLRVFR*ADTWASLAGISMGS Trigger: CGATCCCATGGAGATCCCAGCCAACGAAGCCCACGTGTCGGCCAACCTGAAGACCCTTAACCAGTACAGCATCCCAGAGATCAACCACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS GCA 72 bp | CTCCGTGGTCATCTCGTCGGTAGTTCGGGTGGACTTTaGATAGGTGGGGAACTTCAGGTAGCCGCTCACTCC | + |
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Preference number: 6 (lower is better) Translates to: LRGHLVGSSGGL*IGGELQVAAHS Trigger: GGAGTGAGCGGCTACCTGAAGTTCCCCACCTATGCAAAGTCCACCCGAACTACCGACGAGATGACCACGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CCA 72 bp | CTGTACTGGTTAAGGGTCTTCAGGTTGGCCGACACGTaGGCTTCGTTGGCTGGGATCTCCATGGGATCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LYWLRVFRLADT*ASLAGISMGSL Trigger: CAGCGATCCCATGGAGATCCCAGCCAACGAAGCCCACGTGTCGGCCAACCTGAAGACCCTTAACCAGTACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CAA 72 bp | TTAAGGGTCTTCAGGTTGGCCGACACGTGGGCTTCGTaGGCTGGGATCTCCATGGGATCGCTGTACTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LRVFRLADTWAS*AGISMGSLYLP Trigger: GGGCAAGTACAGCGATCCCATGGAGATCCCAGCCAACGAAGCCCACGTGTCGGCCAACCTGAAGACCCTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CCA 72 bp | TCGTACAGCTGTGTCTGGTGCTCGGCGCTGATGTTCTaGAAGAACTCCGTGGTCATCTCGTCGGTAGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: SYSCVWCSALMF*KNSVVISSVVR Trigger: CCGAACTACCGACGAGATGACCACGGAGTTCTTCCAGAACATCAGCGCCGAGCACCAGACACAGCTGTACGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CAA 72 bp | ATCTCTGGGATGCTGTACTGGTTAAGGGTCTTCAGGTaGGCCGACACGTGGGCTTCGTTGGCTGGGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: ISGMLYWLRVFR*ADTWASLAGIS Trigger: GGAGATCCCAGCCAACGAAGCCCACGTGTCGGCCAACCTGAAGACCCTTAACCAGTACAGCATCCCAGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS TCA 72 bp | TGTAGACTTCGTACAGCTGTGTCTGGTGCTCGGCGCTaGTGTTCTGGAAGAACTCCGTGGTCATCTCGTCGG | + |
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Preference number: 6 (lower is better) Translates to: CRLRTAVSGARR*CSGRTPWSSRR Trigger: CCGACGAGATGACCACGGAGTTCTTCCAGAACATCAGCGCCGAGCACCAGACACAGCTGTACGAAGTCTACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CCA 72 bp | CTTTTCAAGCGGTGGTTGATCTCTGGGATGCTGTACTaGTTAAGGGTCTTCAGGTTGGCCGACACGTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LFKRWLISGMLY*LRVFRLADTWA Trigger: AGCCCACGTGTCGGCCAACCTGAAGACCCTTAACCAGTACAGCATCCCAGAGATCAACCACCGCTTGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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| CDS CCA 72 bp | GAACTTCATGTAGCTTTTCAAGCGGTGGTTGATCTCTaGGATGCTGTACTGGTTAAGGGTCTTCAGGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: ELHVAFQAVVDL*DAVLVKGLQVG Trigger: GCCAACCTGAAGACCCTTAACCAGTACAGCATCCCAGAGATCAACCACCGCTTGAAAAGCTACATGAAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040110.8 |
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