Pregenerated sensors for CHST1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027221Ensembl transcript IDs: ENSMUST00000065797.7
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACCCCAAGATCAATCAGAAACTTCTAAGATTCATTAGCCATTACTaGTCTAGGGGTAGCCACAAGACTCAGACAGACAAGCTCACCACA | + |
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Preference number: 1 (lower is better) Translates to: DPKINQKLLRFISHY*SRGSHKTQTDKLTT Trigger: TGTGGTGAGCTTGTCTGTCTGAGTCTTGTGGCTACCCCTAGACCAGTAATGGCTAATGAATCTTAGAAGTTTCTGATTGATCTTGGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| 3UTR-3UTR GCA 90 bp | CCCCTTTGTGTCCATCCTCTTACCTTGAGAAGACAATTGCAAAACTACCAGTTGAAAACCAGAGCCACCTaGCTCCCACCCCCACCACAC | + |
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Preference number: 2 (lower is better) Translates to: PLCVHPLTLRRQLQNYQLKTRAT*LPPPPH Trigger: GTGTGGTGGGGGTGGGAGGCAGGTGGCTCTGGTTTT...CAACTGGTAGTTTTGCAATTGTCTTCTCAAGGTAAGAGGATGGACACAAAGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| 3UTR-3UTR CCA 90 bp | CAAAAAGAGGCAGGAGAAAAGGAAGTGGGCAAGGTCAAGAAGGACACACAGATGAGAGTGGGCAGGGGCTaGAATGGATACACAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: QKEAGEKEVGKVKKDTQMRVGRG*NGYTDR Trigger: CCTGTCTGTGTATCCATTCCAGCCCCTGCCCACTCT...CATCTGTGTGTCCTTCTTGACCTTGCCCACTTCCTTTTCTCCTGCCTCTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| 3UTR-3UTR CCA 90 bp | ACAAACCAAATAGAAAGTAGTCCCAATTCACCTCACAGTAAAACCCTGCTCACCGGGCAGGGGCTGGAATaGATACACAGACAGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TNQIESSPNSPHSKTLLTGQGLE*IHRQGG Trigger: CCCACCCTGTCTGTGTATCCATTCCAGCCCCTGCCC...GGTGAGCAGGGTTTTACTGTGAGGTGAATTGGGACTACTTTCTATTTGGTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| 3UTR-3UTR CCA 90 bp | CAAATAGAAAGTAGTCCCAATTCACCTCACAGTAAAACCCTGCTCACCACCAGGGACACACAGATGGTGTaGGAGAGGCGAAGGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: QIESSPNSPHSKTLLTTRDTQMV*ERRRKG Trigger: CCCTTTCCTTCGCCTCTCCCACACCATCTGTGTGTC...CCTGGTGGTGAGCAGGGTTTTACTGTGAGGTGAATTGGGACTACTTTCTATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| 3UTR-3UTR CCA 90 bp | TTTTTGGCACAAAGAAATAGCACAGAGGGACCCCAAGATCAATCAGAAACTTCTCAGGAGAAAAGGAAGTaGGCAAGGTCAAGAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: FLAQRNSTEGPQDQSETSQEKRK*ARSRRT Trigger: TGTCCTTCTTGACCTTGCCCACTTCCTTTTCTCCTG...AGAAGTTTCTGATTGATCTTGGGGTCCCTCTGTGCTATTTCTTTGTGCCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| 3UTR-3UTR CAA 90 bp | GGCAAGGGTGTGCAGGAGGGACGGGTGCCCTACTCCAGGGGAGGGAGCAGGAAGAGAGACCCAACATCCTaGTGTCTAAATGGGGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: GKGVQEGRVPYSRGGSRKRDPTS*CLNGVG Trigger: CCCCACCCCATTTAGACACAAGGATGTTGGGTCTCT...CTTCCTGCTCCCTCCCCTGGAGTAGGGCACCCGTCCCTCCTGCACACCCTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| 3UTR TCA 72 bp | GGGAGGTACGGCCCCTTTGTGTCCATCCTCTTACCTTaGGAAGACAATTGCAAAACTACCAGTTGTGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GRYGPFVSILLP*EDNCKTTSCVL Trigger: CAGCACACAACTGGTAGTTTTGCAATTGTCTTCTCAAGGTAAGAGGATGGACACAAAGGGGCCGTACCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| 3UTR-3UTR CAA 90 bp | CAAATAGAAAGTAGTCCCAATTCACCTCACAGTAAAACCCTGCTCACCACCAGGTTGCAAAACTACCAGTaGTGTGCTGGGGTGCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: QIESSPNSPHSKTLLTTRLQNYQ*CAGVPL Trigger: GAGAGGCACCCCAGCACACAACTGGTAGTTTTGCAA...CCTGGTGGTGAGCAGGGTTTTACTGTGAGGTGAATTGGGACTACTTTCTATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| 3UTR-3UTR CAA 90 bp | TTTTTGGCACAAAGAAATAGCACAGAGGGACCCCAAGATCAATCAGAAACTTCTACCTTGAGAAGACAATaGCAAAACTACCAGTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: FLAQRNSTEGPQDQSETSTLRRQ*QNYQLC Trigger: ACACAACTGGTAGTTTTGCAATTGTCTTCTCAAGGT...AGAAGTTTCTGATTGATCTTGGGGTCCCTCTGTGCTATTTCTTTGTGCCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR GCA 90 bp | AGGGTGTGCAGGAGGGACGGGTGCCCTACTCCAGGGGAGGGAGCAGGAAGGGGGCTCACACAGCCGCTCTaGCAAGCCAGTATCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: RVCRRDGCPTPGEGAGRGLTQPL*QASICQ Trigger: CTGACAGATACTGGCTTGGCAGAGCGGCTGTGTGAG...CCCCCTTCCTGCTCCCTCCCCTGGAGTAGGGCACCCGTCCCTCCTGCACACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | AGGGTGTGCAGGAGGGACGGGTGCCCTACTCCAGGGGAGGGAGCAGGAAGGGGGTGTGCTTGCCCAAAGTaGGGTCGCCCCTCGTATTGT | + |
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Preference number: 4 (lower is better) Translates to: RVCRRDGCPTPGEGAGRGCACPK*GRPSYC Trigger: ACAATACGAGGGGCGACCCCACTTTGGGCAAGCACA...CCCCCTTCCTGCTCCCTCCCCTGGAGTAGGGCACCCGTCCCTCCTGCACACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | AAGAAGGACACACAGATGGTGTGGGAGAGGCGAAGGAAAGGGGAGAGTGGGCAGGCGGGGCTCTTGCCCTaGGTGAACCGGGGGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: KKDTQMVWERRRKGESGQAGLLP*VNRGMS Trigger: GCTCATCCCCCGGTTCACCCAGGGCAAGAGCCCCGC...CTGCCCACTCTCCCCTTTCCTTCGCCTCTCCCACACCATCTGTGTGTCCTTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | AGGGTGTGCAGGAGGGACGGGTGCCCTACTCCAGGGGAGGGAGCAGGAAGGGGGGTGGTTGACTGGAGGTaGCTTGATGTAGTTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RVCRRDGCPTPGEGAGRGVVDWR*LDVVLQ Trigger: CTGGAGAACTACATCAAGCCACCTCCAGTCAACCAC...CCCCCTTCCTGCTCCCTCCCCTGGAGTAGGGCACCCGTCCCTCCTGCACACCCT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGCAGGGGCTGGAATGGATACACAGACAGGGTGGGAGAGGGAGGAGGGCCCGGAAGGTCTCACTaGGAGAAGCCAAGATGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RVGRGWNGYTDRVGEGGGPGRSH*EKPRCH Trigger: GTGGCATCTTGGCTTCTCGCAGTGAGACCTTCCGGG...CCCTCCTCCCTCTCCCACCCTGTCTGTGTATCCATTCCAGCCCCTGCCCACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR GCA 90 bp | CAGGCAAGGGTGTGCAGGAGGGACGGGTGCCCTACTCCAGGGGAGGGAGCAGGACAGAGTTGCGCACTGTaGTGTATTTGTGCTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QARVCRRDGCPTPGEGAGQSCAL*CICACP Trigger: TGGGCAAGCACAAATACAGCACAGTGCGCAACTCTG...TCCTGCTCCCTCCCCTGGAGTAGGGCACCCGTCCCTCCTGCACACCCTTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | AGAGTGGGCAGGGGCTGGAATGGATACACAGACAGGGTGGGAGAGGGAGGAGGGCGGATGGCTGTGTACTaGATGGCAATGGAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RVGRGWNGYTDRVGEGGGRMAVY*MAMEAR Trigger: CCTGGCCTCCATTGCCATCCAGTACACAGCCATCCG...CCCTCCTCCCTCTCCCACCCTGTCTGTGTATCCATTCCAGCCCCTGCCCACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR TCA 90 bp | AGAGTGGGCAGGGGCTGGAATGGATACACAGACAGGGTGGGAGAGGGAGGAGGGGGAAAGACTTGGCGGTaGAAGTGCGGATGGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: RVGRGWNGYTDRVGEGGGGKTWR*KCGWLC Trigger: ACACAGCCATCCGCACTTTCACCGCCAAGTCTTTCC...CCCTCCTCCCTCTCCCACCCTGTCTGTGTATCCATTCCAGCCCCTGCCCACTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGCAGGGGCTGGAATGGATACACAGACAGGGTGGGAGAGGGAGGAGGGACGACAAGCCTCGGCTaGCAAGGTCAGGTTCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: RVGRGWNGYTDRVGEGGGTTSLG*QGQVQQ Trigger: TTGCTGAACCTGACCTTGGCAGCCGAGGCTTGTCGT...CCCTCCTCCCTCTCCCACCCTGTCTGTGTATCCATTCCAGCCCCTGCCCACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | AGGGTGTGCAGGAGGGACGGGTGCCCTACTCCAGGGGAGGGAGCAGGAAGGGGGTCTTCATTGGATTTCTaGCCAGGTCCTCATAACGTA | + |
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Preference number: 4 (lower is better) Translates to: RVCRRDGCPTPGEGAGRGSSLDF*PGPHNV Trigger: TACGTTATGAGGACCTGGCCAGAAATCCAATGAAGA...CCCCCTTCCTGCTCCCTCCCCTGGAGTAGGGCACCCGTCCCTCCTGCACACCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR GCA 90 bp | AAGAAGGACACACAGATGGTGTGGGAGAGGCGAAGGAAAGGGGAGAGTGGGCAGGTTCTGGATCCAGTGTaGCACGTGACTGTCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: KKDTQMVWERRRKGESGQVLDPV*HVTVQG Trigger: CCCCTGGACAGTCACGTGGCACACTGGATCCAGAAC...CTGCCCACTCTCCCCTTTCCTTCGCCTCTCCCACACCATCTGTGTGTCCTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | AAGAAGGACACACAGATGGTGTGGGAGAGGCGAAGGAAAGGGGAGAGTGGGCAGGCCAGGATCAGGACGTaGGTCTTCCTGGAGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: KKDTQMVWERRRKGESGQARIRT*VFLERL Trigger: CAACCTCTCCAGGAAGACCCACGTCCTGATCCTGGC...CTGCCCACTCTCCCCTTTCCTTCGCCTCTCCCACACCATCTGTGTGTCCTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | GAGGCAGGAGAAAAGGAAGTGGGCAAGGTCAAGAAGGACACACAGATGGTGTGGTGGAGGGTCACACACTaGACGGGAGCAAAGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: EAGEKEVGKVKKDTQMVWWRVTH*TGAKDP Trigger: AGGGTCCTTTGCTCCCGTCCAGTGTGTGACCCTCCA...CCACACCATCTGTGTGTCCTTCTTGACCTTGCCCACTTCCTTTTCTCCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR GCA 90 bp | CAAATAGAAAGTAGTCCCAATTCACCTCACAGTAAAACCCTGCTCACCACCAGGCCCTGCTGGCCCCTCTaGGGAAGACCCTGTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QIESSPNSPHSKTLLTTRPCWPL*GRPCWW Trigger: CCACCAACAGGGTCTTCCGCAGAGGGGCCAGCAGGG...CCTGGTGGTGAGCAGGGTTTTACTGTGAGGTGAATTGGGACTACTTTCTATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGGAGAAAAGGAAGTGGGCAAGGTCAAGAAGGACACACAGATGGTGTGTGTACTGGATGGCAATaGAGGCCAGGGCGAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: RGRRKGSGQGQEGHTDGVCTGWQ*RPGRGG Trigger: TCCTCCTCGCCCTGGCCTCCATTGCCATCCAGTACA...CACACCATCTGTGTGTCCTTCTTGACCTTGCCCACTTCCTTTTCTCCTGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGGAGAAAAGGAAGTGGGCAAGGTCAAGAAGGACACACAGATGGTGTGAAGAGCCACTGCGTGTaGTGGCCAGGATCAGGACGT | + |
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Preference number: 4 (lower is better) Translates to: RGRRKGSGQGQEGHTDGVKSHCV*WPGSGR Trigger: ACGTCCTGATCCTGGCCACCACACGCAGTGGCTCTT...CACACCATCTGTGTGTCCTTCTTGACCTTGCCCACTTCCTTTTCTCCTGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR TCA 90 bp | AGAGGCAGGAGAAAAGGAAGTGGGCAAGGTCAAGAAGGACACACAGATGGTGTGCATCCATGTGCTGGTTaGAGAGCTGGCCCACAAAGG | + |
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Preference number: 4 (lower is better) Translates to: RGRRKGSGQGQEGHTDGVHPCAG*RAGPQR Trigger: CCTTTGTGGGCCAGCTCTTCAACCAGCACATGGATG...CACACCATCTGTGTGTCCTTCTTGACCTTGCCCACTTCCTTTTCTCCTGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR TCA 90 bp | CAAAAAGAGGCAGGAGAAAAGGAAGTGGGCAAGGTCAAGAAGGACACACAGATGGTCTTGATGGCCACATaGCTGCGCTCACGACAAGCC | + |
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Preference number: 4 (lower is better) Translates to: QKEAGEKEVGKVKKDTQMVLMAT*LRSRQA Trigger: GGCTTGTCGTGAGCGCAGTCATGTGGCCATCAAGAC...CATCTGTGTGTCCTTCTTGACCTTGCCCACTTCCTTTTCTCCTGCCTCTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR GCA 90 bp | CCCCTTTGTGTCCATCCTCTTACCTTGAGAAGACAATTGCAAAACTACCAGTTGGGGAGCAAAGGACCCTaGTGGCCCCTCTGCGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PLCVHPLTLRRQLQNYQLGSKGP*WPLCGR Trigger: TCTTCCGCAGAGGGGCCAGCAGGGTCCTTTGCTCCC...CAACTGGTAGTTTTGCAATTGTCTTCTCAAGGTAAGAGGATGGACACAAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR GCA 90 bp | GAGATAAGGCAACAGTTAAAGACGGCCCATAGTAGGTCCGCGTCAGCAAAACCATGCTGTATTTGTGCTTaGCCAAAGTGGGGTCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: EIRQQLKTAHSRSASAKPCCICA*PKWGRP Trigger: GGGGCGACCCCACTTTGGGCAAGCACAAATACAGCA...TGGTTTTGCTGACGCGGACCTACTATGGGCCGTCTTTAACTGTTGCCTTATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | CAAATAGAAAGTAGTCCCAATTCACCTCACAGTAAAACCCTGCTCACCACCAGGCAGGTCAGAGGACCCTaGAGGGTCACACACTGGACG | + |
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Preference number: 4 (lower is better) Translates to: QIESSPNSPHSKTLLTTRQVRGP*RVTHWT Trigger: CGTCCAGTGTGTGACCCTCCAGGGTCCTCTGACCTG...CCTGGTGGTGAGCAGGGTTTTACTGTGAGGTGAATTGGGACTACTTTCTATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGGAGAAAAGGAAGTGGGCAAGGTCAAGAAGGACACACAGATGGTGTGGGTGGTGTGGTTGACTaGAGGTGGCTTGATGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: RGRRKGSGQGQEGHTDGVGGVVD*RWLDVV Trigger: AACTACATCAAGCCACCTCCAGTCAACCACACCACC...CACACCATCTGTGTGTCCTTCTTGACCTTGCCCACTTCCTTTTCTCCTGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| 3UTR CAA 72 bp | CCTCTTACCTTGAGAAGACAATTGCAAAACTACCAGTaGTGTGCTGGGGTGCCTCTCATCGTGTGCCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: PLTLRRQLQNYQ*CAGVPLIVCLC Trigger: ACACAGGCACACGATGAGAGGCACCCCAGCACACAACTGGTAGTTTTGCAATTGTCTTCTCAAGGTAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR GCA 90 bp | CCCCTTTGTGTCCATCCTCTTACCTTGAGAAGACAATTGCAAAACTACCAGTTGCAAAGGAAGAGCCACTaGGTGTGGTGGCCAGGATCA | + |
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Preference number: 4 (lower is better) Translates to: PLCVHPLTLRRQLQNYQLQRKSH*VWWPGS Trigger: TGATCCTGGCCACCACACGCAGTGGCTCTTCCTTTG...CAACTGGTAGTTTTGCAATTGTCTTCTCAAGGTAAGAGGATGGACACAAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | CAAATAGAAAGTAGTCCCAATTCACCTCACAGTAAAACCCTGCTCACCACCAGGAGCCCAGGGCAAGTGTaGAAAGACTTGGCGGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: QIESSPNSPHSKTLLTTRSPGQV*KDLAVK Trigger: TTTCACCGCCAAGTCTTTCCACACTTGCCCTGGGCT...CCTGGTGGTGAGCAGGGTTTTACTGTGAGGTGAATTGGGACTACTTTCTATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | CCCCTTTGTGTCCATCCTCTTACCTTGAGAAGACAATTGCAAAACTACCAGTTGTGCTGGCAGGCATTCTaGGCAAAGGCCACGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: PLCVHPLTLRRQLQNYQLCWQAF*AKATMS Trigger: TGACATCGTGGCCTTTGCCCAGAATGCCTGCCAGCA...CAACTGGTAGTTTTGCAATTGTCTTCTCAAGGTAAGAGGATGGACACAAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | TTTTTGGCACAAAGAAATAGCACAGAGGGACCCCAAGATCAATCAGAAACTTCTTGGCTGTGTACTGGATaGCAATGGAGGCCAGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: FLAQRNSTEGPQDQSETSWLCTG*QWRPGR Trigger: TCGCCCTGGCCTCCATTGCCATCCAGTACACAGCCA...AGAAGTTTCTGATTGATCTTGGGGTCCCTCTGTGCTATTTCTTTGTGCCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | CAAAAAGAGGCAGGAGAAAAGGAAGTGGGCAAGGTCAAGAAGGACACACAGATGAATCCTCACACACAGTaGTCAGCTGTGTCACATCCA | + |
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Preference number: 4 (lower is better) Translates to: QKEAGEKEVGKVKKDTQMNPHTQ*SAVSHP Trigger: TGGATGTGACACAGCTGACCACTGTGTGTGAGGATT...CATCTGTGTGTCCTTCTTGACCTTGCCCACTTCCTTTTCTCCTGCCTCTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR GCA 90 bp | TTTTTGGCACAAAGAAATAGCACAGAGGGACCCCAAGATCAATCAGAAACTTCTCTTCTCAGCTGTGGCTaGAGAGTTGCGCACTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: FLAQRNSTEGPQDQSETSLLSCG*RVAHCA Trigger: AGCACAGTGCGCAACTCTGCAGCCACAGCTGAGAAG...AGAAGTTTCTGATTGATCTTGGGGTCCCTCTGTGCTATTTCTTTGTGCCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CCA 90 bp | TTTTTGGCACAAAGAAATAGCACAGAGGGACCCCAAGATCAATCAGAAACTTCTTTCTGTCTTCTTCATTaGATTTCTGGCCAGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: FLAQRNSTEGPQDQSETSFCLLH*ISGQVL Trigger: GAGGACCTGGCCAGAAATCCAATGAAGAAGACAGAA...AGAAGTTTCTGATTGATCTTGGGGTCCCTCTGTGCTATTTCTTTGTGCCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CAA 90 bp | AGGGTGTGCAGGAGGGACGGGTGCCCTACTCCAGGGGAGGGAGCAGGAAGGGGGCGATCTGCGGGGCTCTaGCCCTGGGTGAACCGGGGG | + |
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Preference number: 5 (lower is better) Translates to: RVCRRDGCPTPGEGAGRGRSAGL*PWVNRG Trigger: CCCCCGGTTCACCCAGGGCAAGAGCCCCGCAGATCG...CCCCCTTCCTGCTCCCTCCCCTGGAGTAGGGCACCCGTCCCTCCTGCACACCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CAA 90 bp | AGGGTGTGCAGGAGGGACGGGTGCCCTACTCCAGGGGAGGGAGCAGGAAGGGGGCAAGTGTGGAAAGACTaGGCGGTGAAAGTGCGGATG | + |
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Preference number: 5 (lower is better) Translates to: RVCRRDGCPTPGEGAGRGQVWKD*AVKVRM Trigger: CATCCGCACTTTCACCGCCAAGTCTTTCCACACTTG...CCCCCTTCCTGCTCCCTCCCCTGGAGTAGGGCACCCGTCCCTCCTGCACACCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS TCA 90 bp | CCACTAGAGCCCGCAAGTCATTCACCTCGGGCACCCGCACAGTCTTaGTGGCCACATGACTGCGCTCACGACAAGCCTCGGCTGCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: PLEPASHSPRAPAQS*WPHDCAHDKPRLPR Trigger: CCTTGGCAGCCGAGGCTTGTCGTGAGCGCAGTCATGTGGCCATCAAGACTGTGCGGGTGCCCGAGGTGAATGACTTGCGGGCTCTAGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGCAGGGGCTGGAATGGATACACAGACAGGGTGGGAGAGGGAGGAGGGAGCATGTACTTGCCCTaGAGCCAGGAGGGCCGCATG | + |
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Preference number: 5 (lower is better) Translates to: RVGRGWNGYTDRVGEGGGSMYLP*SQEGRM Trigger: CATGCGGCCCTCCTGGCTCAAGGGCAAGTACATGCT...CCCTCCTCCCTCTCCCACCCTGTCTGTGTATCCATTCCAGCCCCTGCCCACTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS TCA 90 bp | CGCAAGTCATTCACCTCGGGCACCCGCACAGTCTTGATGGCCACATaGCTGCGCTCACGACAAGCCTCGGCTGCCAAGGTCAGGTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: RKSFTSGTRTVLMAT*LRSRQASAAKVRFS Trigger: GCTGAACCTGACCTTGGCAGCCGAGGCTTGTCGTGAGCGCAGTCATGTGGCCATCAAGACTGTGCGGGTGCCCGAGGTGAATGACTTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS GCA 90 bp | CAGTGGTCAGCTGTGTCACATCCAGGTTGTAGGGCTTCCTCCCTGTaGCGTACCAAAGCCGCCAGAGCCGGTAGGTGTCCCGGAAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: QWSAVSHPGCRASSL*RTKAARAGRCPGRS Trigger: AGACCTTCCGGGACACCTACCGGCTCTGGCGGCTTTGGTACGGCACAGGGAGGAAGCCCTACAACCTGGATGTGACACAGCTGACCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CCA 90 bp | GTCTCACTGCGAGAAGCCAAGATGCCACGAGGGTCTCGCACCAGCTaGATGACCTTGAGGTTCAGCCTGGGGTCTTCCACTAGAGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VSLREAKMPRGSRTS*MTLRFSLGSSTRAR Trigger: GCGGGCTCTAGTGGAAGACCCCAGGCTGAACCTCAAGGTCATCCAGCTGGTGCGAGACCCTCGTGGCATCTTGGCTTCTCGCAGTGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS GCA 90 bp | CACAGTCTTGATGGCCACATGACTGCGCTCACGACAAGCCTCGGCTaGCAAGGTCAGGTTCAGCAAGCCACACATGCGCACACAGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HSLDGHMTALTTSLG*QGQVQQATHAHTVP Trigger: GGGGACTGTGTGCGCATGTGTGGCTTGCTGAACCTGACCTTGGCAGCCGAGGCTTGTCGTGAGCGCAGTCATGTGGCCATCAAGACTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS GCA 90 bp | CATAGGAGAGGCGGAAGCGCCACTTCTCAGCTGTGGCTGCAGAGTTaGGCACTGTGCTGTATTTGTGCTTGCCCAAAGTGGGGTCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HRRGGSATSQLWLQS*ALCCICACPKWGRP Trigger: GGGGCGACCCCACTTTGGGCAAGCACAAATACAGCACAGTGCGCAACTCTGCAGCCACAGCTGAGAAGTGGCGCTTCCGCCTCTCCTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS GCA 90 bp | GGCGGAAGCGCCACTTCTCAGCTGTGGCTGCAGAGTTGCGCACTGTaGTGTATTTGTGCTTGCCCAAAGTGGGGTCGCCCCTCGTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGSATSQLWLQSCAL*CICACPKWGRPSYC Trigger: ACAATACGAGGGGCGACCCCACTTTGGGCAAGCACAAATACAGCACAGTGCGCAACTCTGCAGCCACAGCTGAGAAGTGGCGCTTCCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CAA 90 bp | AAGAAGGACACACAGATGGTGTGGGAGAGGCGAAGGAAAGGGGAGAGTGGGCAGGGGTCGCCCCTCGTATaGTTCTGGATCCAGTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KKDTQMVWERRRKGESGQGSPLV*FWIQCA Trigger: GGCACACTGGATCCAGAACAATACGAGGGGCGACCC...CTGCCCACTCTCCCCTTTCCTTCGCCTCTCCCACACCATCTGTGTGTCCTTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CCA 90 bp | CAAGTGTGGAAAGACTTGGCGGTGAAAGTGCGGATGGCTGTGTACTaGATGGCAATGGAGGCCAGGGCGAGGAGGAGGACAGCCTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: QVWKDLAVKVRMAVY*MAMEARARRRTAFQ Trigger: TTGGAAGGCTGTCCTCCTCCTCGCCCTGGCCTCCATTGCCATCCAGTACACAGCCATCCGCACTTTCACCGCCAAGTCTTTCCACACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CCA 90 bp | CACAGCCGCTCTGCCAAGCCAGTATCTGTCAGCCCAGGGCAAGTGTaGAAAGACTTGGCGGTGAAAGTGCGGATGGCTGTGTACTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HSRSAKPVSVSPGQV*KDLAVKVRMAVYWM Trigger: CATCCAGTACACAGCCATCCGCACTTTCACCGCCAAGTCTTTCCACACTTGCCCTGGGCTGACAGATACTGGCTTGGCAGAGCGGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CAA 90 bp | AAGAAGGACACACAGATGGTGTGGGAGAGGCGAAGGAAAGGGGAGAGTGGGCAGACCAGCTGGATGACCTaGAGGTTCAGCCTGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KKDTQMVWERRRKGESGQTSWMT*RFSLGS Trigger: AGACCCCAGGCTGAACCTCAAGGTCATCCAGCTGGT...CTGCCCACTCTCCCCTTTCCTTCGCCTCTCCCACACCATCTGTGTGTCCTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS GCA 90 bp | CACGATGTCATAGGAGAGGCGGAAGCGCCACTTCTCAGCTGTGGCTaGAGAGTTGCGCACTGTGCTGTATTTGTGCTTGCCCAAAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HDVIGEAEAPLLSCG*RVAHCAVFVLAQSG Trigger: CCCACTTTGGGCAAGCACAAATACAGCACAGTGCGCAACTCTGCAGCCACAGCTGAGAAGTGGCGCTTCCGCCTCTCCTATGACATCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CCA 90 bp | TGGCTGCAGAGTTGCGCACTGTGCTGTATTTGTGCTTGCCCAAAGTaGGGTCGCCCCTCGTATTGTTCTGGATCCAGTGTGCCACGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: WLQSCALCCICACPK*GRPSYCSGSSVPRD Trigger: GTCACGTGGCACACTGGATCCAGAACAATACGAGGGGCGACCCCACTTTGGGCAAGCACAAATACAGCACAGTGCGCAACTCTGCAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CCA 90 bp | AGGCCACGATGTCATAGGAGAGGCGGAAGCGCCACTTCTCAGCTGTaGCTGCAGAGTTGCGCACTGTGCTGTATTTGTGCTTGCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPRCHRRGGSATSQL*LQSCALCCICACPK Trigger: CTTTGGGCAAGCACAAATACAGCACAGTGCGCAACTCTGCAGCCACAGCTGAGAAGTGGCGCTTCCGCCTCTCCTATGACATCGTGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CAA 90 bp | AAGAAGGACACACAGATGGTGTGGGAGAGGCGAAGGAAAGGGGAGAGTGGGCAGCTGTTGGTGGTGTGGTaGACTGGAGGTGGCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KKDTQMVWERRRKGESGQLLVVW*TGGGLM Trigger: CATCAAGCCACCTCCAGTCAACCACACCACCAACAG...CTGCCCACTCTCCCCTTTCCTTCGCCTCTCCCACACCATCTGTGTGTCCTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CAA 90 bp | GAGGCAGGAGAAAAGGAAGTGGGCAAGGTCAAGAAGGACACACAGATGGTGTGGCGTACCAGCATGTACTaGCCCTTGAGCCAGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EAGEKEVGKVKKDTQMVWRTSMY*PLSQEG Trigger: GCCCTCCTGGCTCAAGGGCAAGTACATGCTGGTACG...CCACACCATCTGTGTGTCCTTCTTGACCTTGCCCACTTCCTTTTCTCCTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS GCA 90 bp | TCTCAGCTGTGGCTGCAGAGTTGCGCACTGTGCTGTATTTGTGCTTaGCCAAAGTGGGGTCGCCCCTCGTATTGTTCTGGATCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQLWLQSCALCCICA*PKWGRPSYCSGSSV Trigger: CACACTGGATCCAGAACAATACGAGGGGCGACCCCACTTTGGGCAAGCACAAATACAGCACAGTGCGCAACTCTGCAGCCACAGCTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS GCA 90 bp | CACTTCTCAGCTGTGGCTGCAGAGTTGCGCACTGTGCTGTATTTGTaGTTGCCCAAAGTGGGGTCGCCCCTCGTATTGTTCTGGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HFSAVAAELRTVLYL*LPKVGSPLVLFWIQ Trigger: CTGGATCCAGAACAATACGAGGGGCGACCCCACTTTGGGCAAGCACAAATACAGCACAGTGCGCAACTCTGCAGCCACAGCTGAGAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CCA 90 bp | CCTGCTGGCCCCTCTGCGGAAGACCCTGTTGGTGGTGTGGTTGACTaGAGGTGGCTTGATGTAGTTCTCCAGAAAGTAGAGATCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: PAGPSAEDPVGGVVD*RWLDVVLQKVEITI Trigger: GATTGTGATCTCTACTTTCTGGAGAACTACATCAAGCCACCTCCAGTCAACCACACCACCAACAGGGTCTTCCGCAGAGGGGCCAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CAA 90 bp | AGAGGCAGGAGAAAAGGAAGTGGGCAAGGTCAAGAAGGACACACAGATGGTGTGGGGGATGAGCGTGTTTaGGACGTGATAGAGCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGRRKGSGQGQEGHTDGVGDERV*DVIERL Trigger: GAGCCGCTCTATCACGTCCAAAACACGCTCATCCCC...CACACCATCTGTGTGTCCTTCTTGACCTTGCCCACTTCCTTTTCTCCTGCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CAA 90 bp | GAGATAAGGCAACAGTTAAAGACGGCCCATAGTAGGTCCGCGTCAGCAAAACCACTGCGGAAGACCCTGTaGGTGGTGTGGTTGACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EIRQQLKTAHSRSASAKPLRKTL*VVWLTG Trigger: TCCAGTCAACCACACCACCAACAGGGTCTTCCGCAG...TGGTTTTGCTGACGCGGACCTACTATGGGCCGTCTTTAACTGTTGCCTTATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CAA 90 bp | GAGATAAGGCAACAGTTAAAGACGGCCCATAGTAGGTCCGCGTCAGCAAAACCAGTGCTGTATTTGTGCTaGCCCAAAGTGGGGTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EIRQQLKTAHSRSASAKPVLYLC*PKVGSP Trigger: GGGCGACCCCACTTTGGGCAAGCACAAATACAGCAC...TGGTTTTGCTGACGCGGACCTACTATGGGCCGTCTTTAACTGTTGCCTTATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CCA 90 bp | GGCCCCTCTGCGGAAGACCCTGTTGGTGGTGTGGTTGACTGGAGGTaGCTTGATGTAGTTCTCCAGAAAGTAGAGATCACAATCATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPSAEDPVGGVVDWR*LDVVLQKVEITIIK Trigger: CTTTATGATTGTGATCTCTACTTTCTGGAGAACTACATCAAGCCACCTCCAGTCAACCACACCACCAACAGGGTCTTCCGCAGAGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CAA 90 bp | CAAAAAGAGGCAGGAGAAAAGGAAGTGGGCAAGGTCAAGAAGGACACACAGATGCGCACTGTGCTGTATTaGTGCTTGCCCAAAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QKEAGEKEVGKVKKDTQMRTVLY*CLPKVG Trigger: CCCCACTTTGGGCAAGCACAAATACAGCACAGTGCG...CATCTGTGTGTCCTTCTTGACCTTGCCCACTTCCTTTTCTCCTGCCTCTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CAA 90 bp | CCCCTTTGTGTCCATCCTCTTACCTTGAGAAGACAATTGCAAAACTACCAGTTGGCTGTGGCTGCAGAGTaGCGCACTGTGCTGTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLCVHPLTLRRQLQNYQLAVAAE*RTVLYL Trigger: CAAATACAGCACAGTGCGCAACTCTGCAGCCACAGC...CAACTGGTAGTTTTGCAATTGTCTTCTCAAGGTAAGAGGATGGACACAAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS-3UTR CAA 90 bp | ACAAACCAAATAGAAAGTAGTCCCAATTCACCTCACAGTAAAACCCTGCTCACCCTTCTGTCTTCTTCATaGGATTTCTGGCCAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TNQIESSPNSPHSKTLLTLLSSS*DFWPGP Trigger: AGGACCTGGCCAGAAATCCAATGAAGAAGACAGAAG...GGTGAGCAGGGTTTTACTGTGAGGTGAATTGGGACTACTTTCTATTTGGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS GCA 72 bp | GCCGCCAGAGCCGGTAGGTGTCCCGGAAGGTCTCACTaGGAGAAGCCAAGATGCCACGAGGGTCTCGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: AARAGRCPGRSH*EKPRCHEGLAP Trigger: TGGTGCGAGACCCTCGTGGCATCTTGGCTTCTCGCAGTGAGACCTTCCGGGACACCTACCGGCTCTGGCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CCA 72 bp | CAGGATCAGGTCAGAGGACCCTGGAGGGTCACACACTaGACGGGAGCAAAGGACCCTGCTGGCCCCTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: QDQVRGPWRVTH*TGAKDPAGPSA Trigger: CGCAGAGGGGCCAGCAGGGTCCTTTGCTCCCGTCCAGTGTGTGACCCTCCAGGGTCCTCTGACCTGATCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CCA 72 bp | GAGGGTCACACACTGGACGGGAGCAAAGGACCCTGCTaGCCCCTCTGCGGAAGACCCTGTTGGTGGTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: EGHTLDGSKGPC*PLCGRPCWWCG Trigger: ACCACACCACCAACAGGGTCTTCCGCAGAGGGGCCAGCAGGGTCCTTTGCTCCCGTCCAGTGTGTGACCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS TCA 72 bp | TTCACCTCGGGCACCCGCACAGTCTTGATGGCCACATaGCTGCGCTCACGACAAGCCTCGGCTGCCAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: FTSGTRTVLMAT*LRSRQASAAKV Trigger: GACCTTGGCAGCCGAGGCTTGTCGTGAGCGCAGTCATGTGGCCATCAAGACTGTGCGGGTGCCCGAGGTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS TCA 72 bp | CCCGCAAGTCATTCACCTCGGGCACCCGCACAGTCTTaGTGGCCACATGACTGCGCTCACGACAAGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: PASHSPRAPAQS*WPHDCAHDKPR Trigger: CCGAGGCTTGTCGTGAGCGCAGTCATGTGGCCATCAAGACTGTGCGGGTGCCCGAGGTGAATGACTTGCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS GCA 72 bp | GCTGTGTCACATCCAGGTTGTAGGGCTTCCTCCCTGTaGCGTACCAAAGCCGCCAGAGCCGGTAGGTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: AVSHPGCRASSL*RTKAARAGRCP Trigger: GGGACACCTACCGGCTCTGGCGGCTTTGGTACGGCACAGGGAGGAAGCCCTACAACCTGGATGTGACACAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS GCA 72 bp | GTAGGAGAAGGTAGGGCCCTCCTCACACAGCCGCTCTaGCAAGCCAGTATCTGTCAGCCCAGGGCAAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VGEGRALLTQPL*QASICQPRASV Trigger: CACACTTGCCCTGGGCTGACAGATACTGGCTTGGCAGAGCGGCTGTGTGAGGAGGGCCCTACCTTCTCCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS GCA 72 bp | GATGGCCACATGACTGCGCTCACGACAAGCCTCGGCTaGCAAGGTCAGGTTCAGCAAGCCACACATGCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: DGHMTALTTSLG*QGQVQQATHAH Trigger: GTGCGCATGTGTGGCTTGCTGAACCTGACCTTGGCAGCCGAGGCTTGTCGTGAGCGCAGTCATGTGGCCATC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CCA 72 bp | AGAGCTGGCCCACAAAGGAAGAGCCACTGCGTGTGGTaGCCAGGATCAGGACGTGGGTCTTCCTGGAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RAGPQRKSHCVW*PGSGRGSSWRG Trigger: ACCTCTCCAGGAAGACCCACGTCCTGATCCTGGCCACCACACGCAGTGGCTCTTCCTTTGTGGGCCAGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS GCA 72 bp | GCCACTTCTCAGCTGTGGCTGCAGAGTTGCGCACTGTaGTGTATTTGTGCTTGCCCAAAGTGGGGTCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ATSQLWLQSCAL*CICACPKWGRP Trigger: GGGGCGACCCCACTTTGGGCAAGCACAAATACAGCACAGTGCGCAACTCTGCAGCCACAGCTGAGAAGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CAA 90 bp | ATCTGCGGGGCTCTTGCCCTGGGTGAACCGGGGGATGAGCGTGTTTaGGACGTGATAGAGCGGCTCGAACAGGTAGAAGACATCCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: ICGALALGEPGDERV*DVIERLEQVEDIHV Trigger: CACATGGATGTCTTCTACCTGTTCGAGCCGCTCTATCACGTCCAAAACACGCTCATCCCCCGGTTCACCCAGGGCAAGAGCCCCGCAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CCA 72 bp | AAAGACTTGGCGGTGAAAGTGCGGATGGCTGTGTACTaGATGGCAATGGAGGCCAGGGCGAGGAGGAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: KDLAVKVRMAVY*MAMEARARRRT Trigger: TGTCCTCCTCCTCGCCCTGGCCTCCATTGCCATCCAGTACACAGCCATCCGCACTTTCACCGCCAAGTCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CAA 72 bp | GCTCTTGCCCTGGGTGAACCGGGGGATGAGCGTGTTTaGGACGTGATAGAGCGGCTCGAACAGGTAGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ALALGEPGDERV*DVIERLEQVED Trigger: GTCTTCTACCTGTTCGAGCCGCTCTATCACGTCCAAAACACGCTCATCCCCCGGTTCACCCAGGGCAAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CAA 90 bp | CGCCACTTCTCAGCTGTGGCTGCAGAGTTGCGCACTGTGCTGTATTaGTGCTTGCCCAAAGTGGGGTCGCCCCTCGTATTGTTCTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: RHFSAVAAELRTVLY*CLPKVGSPLVLFWI Trigger: GATCCAGAACAATACGAGGGGCGACCCCACTTTGGGCAAGCACAAATACAGCACAGTGCGCAACTCTGCAGCCACAGCTGAGAAGTGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS GCA 72 bp | ATAGGAGAGGCGGAAGCGCCACTTCTCAGCTGTGGCTaGAGAGTTGCGCACTGTGCTGTATTTGTGCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: IGEAEAPLLSCG*RVAHCAVFVLA Trigger: GGCAAGCACAAATACAGCACAGTGCGCAACTCTGCAGCCACAGCTGAGAAGTGGCGCTTCCGCCTCTCCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CAA 72 bp | TCAGCTGTGGCTGCAGAGTTGCGCACTGTGCTGTATTaGTGCTTGCCCAAAGTGGGGTCGCCCCTCGTATTG | + |
|
Preference number: 6 (lower is better) Translates to: SAVAAELRTVLY*CLPKVGSPLVL Trigger: CAATACGAGGGGCGACCCCACTTTGGGCAAGCACAAATACAGCACAGTGCGCAACTCTGCAGCCACAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CAA 90 bp | TTCTCAGCTGTGGCTGCAGAGTTGCGCACTGTGCTGTATTTGTGCTaGCCCAAAGTGGGGTCGCCCCTCGTATTGTTCTGGATCCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: FSAVAAELRTVLYLC*PKVGSPLVLFWIQC Trigger: ACACTGGATCCAGAACAATACGAGGGGCGACCCCACTTTGGGCAAGCACAAATACAGCACAGTGCGCAACTCTGCAGCCACAGCTGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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| CDS CCA 72 bp | CCCTCTGCGGAAGACCCTGTTGGTGGTGTGGTTGACTaGAGGTGGCTTGATGTAGTTCTCCAGAAAGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSAEDPVGGVVD*RWLDVVLQKVE Trigger: CTCTACTTTCTGGAGAACTACATCAAGCCACCTCCAGTCAACCACACCACCAACAGGGTCTTCCGCAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
||
| CDS CCA 72 bp | AGTTGCGCACTGTGCTGTATTTGTGCTTGCCCAAAGTaGGGTCGCCCCTCGTATTGTTCTGGATCCAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SCALCCICACPK*GRPSYCSGSSV Trigger: CACACTGGATCCAGAACAATACGAGGGGCGACCCCACTTTGGGCAAGCACAAATACAGCACAGTGCGCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
||
| CDS CCA 72 bp | GCGGAAGACCCTGTTGGTGGTGTGGTTGACTGGAGGTaGCTTGATGTAGTTCTCCAGAAAGTAGAGATCACA | + |
|
Preference number: 6 (lower is better) Translates to: AEDPVGGVVDWR*LDVVLQKVEIT Trigger: TGTGATCTCTACTTTCTGGAGAACTACATCAAGCCACCTCCAGTCAACCACACCACCAACAGGGTCTTCCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
||
| CDS CAA 90 bp | CCAGGGGGATACCCAGGAATTCGTAGATCTCTTCTGTCTTCTTCATaGGATTTCTGGCCAGGTCCTCATAACGTACCAGCATGTACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGGYPGIRRSLLSSS*DFWPGPHNVPACTC Trigger: GCAAGTACATGCTGGTACGTTATGAGGACCTGGCCAGAAATCCAATGAAGAAGACAGAAGAGATCTACGAATTCCTGGGTATCCCCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065797.7 |
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