Pregenerated sensors for CHRNG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026253Ensembl transcript IDs: ENSMUST00000027470.14, ENSMUST00000185763.7, ENSMUST00000186038.2, ENSMUST00000188796.7
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGAGGGTGTTGGATCGCCTGCAACTGGAGTAACAGATGCTACATaGGTGCTGGAAACCAACCCAGATCCCCGGGAAAGTAGCCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: EEGVGSPATGVTDAT*VLETNPDPRESSQC Trigger: ACACTGGCTACTTTCCCGGGGATCTGGGTTGGTTTCCAGCACCCATGTAGCATCTGTTACTCCAGTTGCAGGCGATCCAACACCCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR GCA 90 bp | GGTGTTCTGTCTGTGCATATGTCTGCACTATATGCATGGGCGTTTTaGAAAGCCAGAGGAGGGTGTTGGATCGCCTGCAACTGGAGTAAC | + |
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Preference number: 1 (lower is better) Translates to: GVLSVHMSALYAWAF*KARGGCWIACNWSN Trigger: GTTACTCCAGTTGCAGGCGATCCAACACCCTCCTCTGGCTTTGCAAAACGCCCATGCATATAGTGCAGACATATGCACAGACAGAACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR TCA 90 bp | CTCTTAGGGCTTCAAAGTGACCTATCAGAACTGCTCAAAGTCATGTaGCCATACCCATCACCAACCACTGCAGAAATCCCCCTCTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: LLGLQSDLSELLKVM*PYPSPTTAEIPLCL Trigger: GAGACAGAGGGGGATTTCTGCAGTGGTTGGTGATGGGTATGGTCACATGACTTTGAGCAGTTCTGATAGGTCACTTTGAAGCCCTAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR GCA 90 bp | AGATGTTGGAGCTGGGAAAACAGCTCAGTGGTTAAGAACACTTGCTaGTTTTATAGAGGACATGAGCAACCCACTGTCTGGTTGCTCATG | + |
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Preference number: 1 (lower is better) Translates to: RCWSWENSSVVKNTC*FYRGHEQPTVWLLM Trigger: CATGAGCAACCAGACAGTGGGTTGCTCATGTCCTCTATAAAAGCAGCAAGTGTTCTTAACCACTGAGCTGTTTTCCCAGCTCCAACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR GCA 90 bp | ATCAGAACTGCTCAAAGTCATGTGACCATACCCATCACCAACCACTaGAGAAATCCCCCTCTGTCTCTTTATTTCTCTATCTTCTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: IRTAQSHVTIPITNH*RNPPLSLYFSIFSQ Trigger: CTGGGAGAAGATAGAGAAATAAAGAGACAGAGGGGGATTTCTGCAGTGGTTGGTGATGGGTATGGTCACATGACTTTGAGCAGTTCTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR CCA 90 bp | AAGAACACTTGCTGCTTTTATAGAGGACATGAGCAACCCACTGTCTaGTTGCTCATGACCACCTATAACTCCAACTCTAGGGTTCTGACA | + |
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Preference number: 1 (lower is better) Translates to: KNTCCFYRGHEQPTV*LLMTTYNSNSRVLT Trigger: TGTCAGAACCCTAGAGTTGGAGTTATAGGTGGTCATGAGCAACCAGACAGTGGGTTGCTCATGTCCTCTATAAAAGCAGCAAGTGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR CCA 90 bp | GAAAGTTCACATAGGGAAGATGTTGGAGCTGGGAAAACAGCTCAGTaGTTAAGAACACTTGCTGCTTTTATAGAGGACATGAGCAACCCA | + |
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Preference number: 1 (lower is better) Translates to: ESSHREDVGAGKTAQ*LRTLAAFIEDMSNP Trigger: TGGGTTGCTCATGTCCTCTATAAAAGCAGCAAGTGTTCTTAACCACTGAGCTGTTTTCCCAGCTCCAACATCTTCCCTATGTGAACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR-3UTR TCA 90 bp | AACCTTGCCCAGTCAATGACATCAGGAAAGGCAGAGCTCTTAGGGCTTCAAAGTCTGCTCAAAGTCATGTaGCCATACCCATCACCAACC | + |
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Preference number: 2 (lower is better) Translates to: NLAQSMTSGKAELLGLQSLLKVM*PYPSPT Trigger: GGTTGGTGATGGGTATGGTCACATGACTTTGAGCAG...ACTTTGAAGCCCTAAGAGCTCTGCCTTTCCTGATGTCATTGACTGGGCAAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR-3UTR TCA 90 bp | GAGATAGTAAAACTCAAGAAATCCTTTGTGATCAGTGGGGGTGGGAGGAAGTATACCTTGCCCAGTCAATaGCATCAGGAAAGGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: EIVKLKKSFVISGGGRKYTLPSQ*HQERQS Trigger: GCTCTGCCTTTCCTGATGTCATTGACTGGGCAAGGT...ATACTTCCTCCCACCCCCACTGATCACAAAGGATTTCTTGAGTTTTACTATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR-3UTR GCA 90 bp | GAGATAGTAAAACTCAAGAAATCCTTTGTGATCAGTGGGGGTGGGAGGAAGTATCAGATGCTACATGGGTaGTGGAAACCAACCCAGATC | + |
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Preference number: 2 (lower is better) Translates to: EIVKLKKSFVISGGGRKYQMLHG*WKPTQI Trigger: GATCTGGGTTGGTTTCCAGCACCCATGTAGCATCTG...ATACTTCCTCCCACCCCCACTGATCACAAAGGATTTCTTGAGTTTTACTATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR-3UTR CCA 90 bp | GAGATAGTAAAACTCAAGAAATCCTTTGTGATCAGTGGGGGTGGGAGGAAGTATGGAAGATGTTGGAGCTaGGAAAACAGCTCAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: EIVKLKKSFVISGGGRKYGRCWS*ENSSVV Trigger: AACCACTGAGCTGTTTTCCCAGCTCCAACATCTTCC...ATACTTCCTCCCACCCCCACTGATCACAAAGGATTTCTTGAGTTTTACTATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR GCA 72 bp | GGAGGGTGTTGGATCGCCTGCAACTGGAGTAACAGATaGTACATGGGTGCTGGAAACCAACCCAGATCCCCG | + |
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Preference number: 3 (lower is better) Translates to: GGCWIACNWSNR*YMGAGNQPRSP Trigger: CGGGGATCTGGGTTGGTTTCCAGCACCCATGTAGCATCTGTTACTCCAGTTGCAGGCGATCCAACACCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR GCA 72 bp | CCATGTACACTGACCTCAAACAGATGGATTTGTCTCTaGCTCCCTAGTGCTAGGACTAAAGGCCCCACCACG | + |
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Preference number: 3 (lower is better) Translates to: PCTLTSNRWICL*LPSARTKGPTT Trigger: CGTGGTGGGGCCTTTAGTCCTAGCACTAGGGAGGCAGAGACAAATCCATCTGTTTGAGGTCAGTGTACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR CCA 72 bp | TGCAAAGCCAGAGGAGGGTGTTGGATCGCCTGCAACTaGAGTAACAGATGCTACATGGGTGCTGGAAACCAA | + |
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Preference number: 3 (lower is better) Translates to: CKARGGCWIACN*SNRCYMGAGNQ Trigger: TTGGTTTCCAGCACCCATGTAGCATCTGTTACTCCAGTTGCAGGCGATCCAACACCCTCCTCTGGCTTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR-3UTR CAA 90 bp | CAAAGTCATGTGACCATACCCATCACCAACCACTGCAGAAATCCCCCTCTGTCTTTCTCCCAGGAAGCCTaGGGTATTTCCCCAAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: QSHVTIPITNHCRNPPLSFSQEA*GISPRA Trigger: TGCTCTTGGGGAAATACCCAAGGCTTCCTGGGAGAA...AGACAGAGGGGGATTTCTGCAGTGGTTGGTGATGGGTATGGTCACATGACTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR GCA 72 bp | TCTGTGCATATGTCTGCACTATATGCATGGGCGTTTTaGAAAGCCAGAGGAGGGTGTTGGATCGCCTGCAAC | + |
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Preference number: 3 (lower is better) Translates to: SVHMSALYAWAF*KARGGCWIACN Trigger: GTTGCAGGCGATCCAACACCCTCCTCTGGCTTTGCAAAACGCCCATGCATATAGTGCAGACATATGCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR CCA 72 bp | TCAGTGGGGGTGGGAGGAAGTATTACATTAGACGAATaGGACGTACTGCTGAAGGTACACATTTGTGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: SVGVGGSITLDE*DVLLKVHICAV Trigger: CACAGCACAAATGTGTACCTTCAGCAGTACGTCCCATTCGTCTAATGTAATACTTCCTCCCACCCCCACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR TCA 72 bp | CTTCAAAGTGACCTATCAGAACTGCTCAAAGTCATGTaGCCATACCCATCACCAACCACTGCAGAAATCCCC | + |
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Preference number: 3 (lower is better) Translates to: LQSDLSELLKVM*PYPSPTTAEIP Trigger: GGGGATTTCTGCAGTGGTTGGTGATGGGTATGGTCACATGACTTTGAGCAGTTCTGATAGGTCACTTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR GCA 72 bp | GGAGGAAATTTTCTCAGGCCTCAAAGGGTAAAACCTTaGCCAGTCAATGACATCAGGAAAGGCAGAGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: GGNFLRPQRVKP*PVNDIRKGRAL Trigger: AAGAGCTCTGCCTTTCCTGATGTCATTGACTGGGCAAGGTTTTACCCTTTGAGGCCTGAGAAAATTTCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR GCA 72 bp | AGCTGGGAAAACAGCTCAGTGGTTAAGAACACTTGCTaGTTTTATAGAGGACATGAGCAACCCACTGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: SWENSSVVKNTC*FYRGHEQPTVW Trigger: CCAGACAGTGGGTTGCTCATGTCCTCTATAAAAGCAGCAAGTGTTCTTAACCACTGAGCTGTTTTCCCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR GCA 72 bp | TGGAGCTGGGAAAACAGCTCAGTGGTTAAGAACACTTaGTGCTTTTATAGAGGACATGAGCAACCCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: WSWENSSVVKNT*CFYRGHEQPTV Trigger: GACAGTGGGTTGCTCATGTCCTCTATAAAAGCAGCAAGTGTTCTTAACCACTGAGCTGTTTTCCCAGCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR CCA 72 bp | GACAGGATCTCACCATGTACACTGACCTCAAACAGATaGATTTGTCTCTGCCTCCCTAGTGCTAGGACTAAA | + |
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Preference number: 3 (lower is better) Translates to: DRISPCTLTSNR*ICLCLPSARTK Trigger: TTTAGTCCTAGCACTAGGGAGGCAGAGACAAATCCATCTGTTTGAGGTCAGTGTACATGGTGAGATCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR GCA 72 bp | GCTCAAAGTCATGTGACCATACCCATCACCAACCACTaGAGAAATCCCCCTCTGTCTCTTTATTTCTCTATC | + |
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Preference number: 3 (lower is better) Translates to: AQSHVTIPITNH*RNPPLSLYFSI Trigger: GATAGAGAAATAAAGAGACAGAGGGGGATTTCTGCAGTGGTTGGTGATGGGTATGGTCACATGACTTTGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR GCA 72 bp | TCTTGTGTATATGGGTGTTCTGTCTGTGCATATGTCTaGACTATATGCATGGGCGTTTTGCAAAGCCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: SCVYGCSVCAYV*TICMGVLQSQR Trigger: CCTCTGGCTTTGCAAAACGCCCATGCATATAGTGCAGACATATGCACAGACAGAACACCCATATACACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR CCA 72 bp | CATAGGGAAGATGTTGGAGCTGGGAAAACAGCTCAGTaGTTAAGAACACTTGCTGCTTTTATAGAGGACATG | + |
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Preference number: 3 (lower is better) Translates to: HREDVGAGKTAQ*LRTLAAFIEDM Trigger: CATGTCCTCTATAAAAGCAGCAAGTGTTCTTAACCACTGAGCTGTTTTCCCAGCTCCAACATCTTCCCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR TCA 90 bp | GCCAGAGGAGGGTGTTGGATCGCCTGCAACTGGAGTAACAGATGCTACATGGGTAGCAGCAAGAGGAGCTaGGGTCTCTGGCCCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: ARGGCWIACNWSNRCYMGSSKRS*GLWPPC Trigger: GCAAGGGGGCCAGAGACCTCAGCTCCTCTTGCTGCT...ACCCATGTAGCATCTGTTACTCCAGTTGCAGGCGATCCAACACCCTCCTCTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR GCA 90 bp | ATCAACACGGGATACAGCTCTACAAACAGCATGGCCCTCATAGCTGACTCCAGGGACGCTCCTCTTGGTTaGGGCTCTGGGCCCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: INTGYSSTNSMALIADSRDAPLG*GSGPPG Trigger: GCCTGGGGGCCCAGAGCCGCAACCAAGAGGAGCGTC...CCTGGAGTCAGCTATGAGGGCCATGCTGTTTGTAGAGCTGTATCCCGTGTTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | ATCAACACGGGATACAGCTCTACAAACAGCATGGCCCTCATAGCTGACTCCAGGTCTTGGTTGCGGCTCTaGGCCCCCAGGCAGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: INTGYSSTNSMALIADSRSWLRL*APRQTA Trigger: GGCTGTCTGCCTGGGGGCCCAGAGCCGCAACCAAGA...CCTGGAGTCAGCTATGAGGGCCATGCTGTTTGTAGAGCTGTATCCCGTGTTGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR GCA 90 bp | ATCAACACGGGATACAGCTCTACAAACAGCATGGCCCTCATAGCTGACTCCAGGCGTTGGTGGCCACTGTaGATTTCTGCCCGCCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: INTGYSSTNSMALIADSRRWWPL*ISARPP Trigger: AGGCGGGCGGGCAGAAATGCACAGTGGCCACCAACG...CCTGGAGTCAGCTATGAGGGCCATGCTGTTTGTAGAGCTGTATCCCGTGTTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | CAAAGTCATGTGACCATACCCATCACCAACCACTGCAGAAATCCCCCTCTGTCTCCGGTCGGTGCCGGATaGCCCACTCCCCATTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QSHVTIPITNHCRNPPLSPVGAG*PTPHSL Trigger: CAGAGAATGGGGAGTGGGCCATCCGGCACCGACCGG...AGACAGAGGGGGATTTCTGCAGTGGTTGGTGATGGGTATGGTCACATGACTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | ACATCAGGAAAGGCAGAGCTCTTAGGGCTTCAAAGTGACCTATCAGAACTGCTCAGCAGACGCTCCTCTTaGTTGCGGCTCTGGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: TSGKAELLGLQSDLSELLSRRSS*LRLWAP Trigger: GGGGGCCCAGAGCCGCAACCAAGAGGAGCGTCTGCT...GAGCAGTTCTGATAGGTCACTTTGAAGCCCTAAGAGCTCTGCCTTTCCTGATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | GCCAGAGGAGGGTGTTGGATCGCCTGCAACTGGAGTAACAGATGCTACATGGGTGCTTGCCCATCCTCCTaGCTCAGCTGCAAGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: ARGGCWIACNWSNRCYMGACPSS*LSCKLI Trigger: GATCAACTTGCAGCTGAGCCAGGAGGATGGGCAAGC...ACCCATGTAGCATCTGTTACTCCAGTTGCAGGCGATCCAACACCCTCCTCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | GGTTCTGACATCCTCTGCCAACTTCCAACAGGCATGCTCACTCATGTGCACATAGCCATGGAGTGTGTGTaGGGGGACCGCAAGGACACA | + |
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Preference number: 4 (lower is better) Translates to: GSDILCQLPTGMLTHVHIAMECV*GDRKDT Trigger: TGTGTCCTTGCGGTCCCCCCACACACACTCCATGGC...TATGTGCACATGAGTGAGCATGCCTGTTGGAAGTTGGCAGAGGATGTCAGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | GAGCACACTCAGCATCAACACGGGATACAGCTCTACAAACAGCATGGCCCTCATTGCATCCGTAACAGCTaGGGCAGGAGCCTCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: EHTQHQHGIQLYKQHGPHCIRNS*GRSLRN Trigger: GTTCCTGAGGCTCCTGCCCCAGCTGTTACGGATGCA...ATGAGGGCCATGCTGTTTGTAGAGCTGTATCCCGTGTTGATGCTGAGTGTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | GGTTCTGACATCCTCTGCCAACTTCCAACAGGCATGCTCACTCATGTGCACATACCACACAGGCCTGGATaGCTGGGGAGGCTTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GSDILCQLPTGMLTHVHIPHRPG*LGRLAS Trigger: TGAAGCAAGCCTCCCCAGCCATCCAGGCCTGTGTGG...TATGTGCACATGAGTGAGCATGCCTGTTGGAAGTTGGCAGAGGATGTCAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR TCA 90 bp | GAGCACACTCAGCATCAACACGGGATACAGCTCTACAAACAGCATGGCCCTCATGGATGGTCACCACCATaGGGAAGGTCAGGTACTTGC | + |
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Preference number: 4 (lower is better) Translates to: EHTQHQHGIQLYKQHGPHGWSPP*GRSGTC Trigger: GCAAGTACCTGACCTTCCTCATGGTGGTGACCATCC...ATGAGGGCCATGCTGTTTGTAGAGCTGTATCCCGTGTTGATGCTGAGTGTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR GCA 90 bp | ACATCAGGAAAGGCAGAGCTCTTAGGGCTTCAAAGTGACCTATCAGAACTGCTCATTTTAGCCGGTCGGTaGCGGATGGCCCACTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TSGKAELLGLQSDLSELLILAGR*RMAHSP Trigger: TGGGGAGTGGGCCATCCGGCACCGACCGGCTAAAAT...GAGCAGTTCTGATAGGTCACTTTGAAGCCCTAAGAGCTCTGCCTTTCCTGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR GCA 90 bp | GGTTCTGACATCCTCTGCCAACTTCCAACAGGCATGCTCACTCATGTGCACATAATGGCTGGGGAGGCTTaGTTCAGGCTGCCACAGAAC | + |
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Preference number: 4 (lower is better) Translates to: GSDILCQLPTGMLTHVHIMAGEA*FRLPQN Trigger: GTTCTGTGGCAGCCTGAAGCAAGCCTCCCCAGCCAT...TATGTGCACATGAGTGAGCATGCCTGTTGGAAGTTGGCAGAGGATGTCAGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | GAGCACACTCAGCATCAACACGGGATACAGCTCTACAAACAGCATGGCCCTCATGCCTTCGTAGTCTTTTaGGTCCCAGCGCAGGCGATA | + |
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Preference number: 4 (lower is better) Translates to: EHTQHQHGIQLYKQHGPHAFVVF*VPAQAI Trigger: TATCGCCTGCGCTGGGACCCAAAAGACTACGAAGGC...ATGAGGGCCATGCTGTTTGTAGAGCTGTATCCCGTGTTGATGCTGAGTGTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR TCA 90 bp | ACATCAGGAAAGGCAGAGCTCTTAGGGCTTCAAAGTGACCTATCAGAACTGCTCGGTTGTAGTGGGCCATaGGGAAGATGCCAGCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: TSGKAELLGLQSDLSELLGCSGP*GRCQQC Trigger: GCACTGCTGGCATCTTCCTCATGGCCCACTACAACC...GAGCAGTTCTGATAGGTCACTTTGAAGCCCTAAGAGCTCTGCCTTTCCTGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | GAAAGTTCACATAGGGAAGATGTTGGAGCTGGGAAAACAGCTCAGTGGTTAAGAAACACCACCTTCTGGTaGCCCGCCTCCTCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ESSHREDVGAGKTAQWLRNTTFW*PASSAG Trigger: TCCTGCAGAGGAGGCGGGCCACCAGAAGGTGGTGTT...TCTTAACCACTGAGCTGTTTTCCCAGCTCCAACATCTTCCCTATGTGAACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| 3UTR CAA 72 bp | GTCTGTGCATATGTCTGCACTATATGCATGGGCGTTTaGCAAAGCCAGAGGAGGGTGTTGGATCGCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: VCAYVCTICMGV*QSQRRVLDRLQ Trigger: TTGCAGGCGATCCAACACCCTCCTCTGGCTTTGCAAAACGCCCATGCATATAGTGCAGACATATGCACAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR TCA 90 bp | CAGTGGTTAAGAACACTTGCTGCTTTTATAGAGGACATGAGCAACCCACTGTCTTTCCCACTGTCAAAGTaGCTCTGCTGGCGTCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: QWLRTLAAFIEDMSNPLSFPLSK*LCWRRA Trigger: TGCCCGACGCCAGCAGAGTCACTTTGACAGTGGGAA...AGACAGTGGGTTGCTCATGTCCTCTATAAAAGCAGCAAGTGTTCTTAACCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR GCA 90 bp | CCATACCCATCACCAACCACTGCAGAAATCCCCCTCTGTCTCTTTATTTCTCTAAGGCTTGCTTCAGGCTaGCACAGAACTCCTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PYPSPTTAEIPLCLFISLRLASG*HRTPGS Trigger: AGAGCCAGGAGTTCTGTGGCAGCCTGAAGCAAGCCT...TAGAGAAATAAAGAGACAGAGGGGGATTTCTGCAGTGGTTGGTGATGGGTATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | GAACCTTCTAGAGAAAGTTCACATAGGGAAGATGTTGGAGCTGGGAAAACAGCTCCAGGAGCACGTTGGTaGCCACTGTGCATTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: EPSRESSHREDVGAGKTAPGARW*PLCISA Trigger: GGCAGAAATGCACAGTGGCCACCAACGTGCTCCTGG...AGCTGTTTTCCCAGCTCCAACATCTTCCCTATGTGAACTTTCTCTAGAAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | GAGATAGTAAAACTCAAGAAATCCTTTGTGATCAGTGGGGGTGGGAGGAAGTATACAGGCCTGGATGGCTaGGGAGGCTTGCTTCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: EIVKLKKSFVISGGGRKYTGLDG*GGLLQA Trigger: AGCCTGAAGCAAGCCTCCCCAGCCATCCAGGCCTGT...ATACTTCCTCCCACCCCCACTGATCACAAAGGATTTCTTGAGTTTTACTATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR TCA 90 bp | CCATACCCATCACCAACCACTGCAGAAATCCCCCTCTGTCTCTTTATTTCTCTAGGCTCAGCTGCAAGTTaGTCTCACTGGTGCTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: PYPSPTTAEIPLCLFISLGSAAS*SHWCCK Trigger: CTTACAGCACCAGTGAGATCAACTTGCAGCTGAGCC...TAGAGAAATAAAGAGACAGAGGGGGATTTCTGCAGTGGTTGGTGATGGGTATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR TCA 90 bp | GAGATAGTAAAACTCAAGAAATCCTTTGTGATCAGTGGGGGTGGGAGGAAGTATGATGAGGATGGCGACTaGGGAGATGAGCACACAGGG | + |
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Preference number: 4 (lower is better) Translates to: EIVKLKKSFVISGGGRKYDEDGD*GDEHTG Trigger: CCCTGTGTGCTCATCTCCTCAGTCGCCATCCTCATC...ATACTTCCTCCCACCCCCACTGATCACAAAGGATTTCTTGAGTTTTACTATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR GCA 90 bp | GAACCTTCTAGAGAAAGTTCACATAGGGAAGATGTTGGAGCTGGGAAAACAGCTATCCACTCAATGGCTTaGCCATCCTCCTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EPSRESSHREDVGAGKTAIHSMA*PSSWLS Trigger: GCTGAGCCAGGAGGATGGGCAAGCCATTGAGTGGAT...AGCTGTTTTCCCAGCTCCAACATCTTCCCTATGTGAACTTTCTCTAGAAGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | GAGATAGTAAAACTCAAGAAATCCTTTGTGATCAGTGGGGGTGGGAGGAAGTATGGGCCAGGAGCACGTTaGTGGCCACTGTGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EIVKLKKSFVISGGGRKYGPGAR*WPLCIS Trigger: AGAAATGCACAGTGGCCACCAACGTGCTCCTGGCCC...ATACTTCCTCCCACCCCCACTGATCACAAAGGATTTCTTGAGTTTTACTATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | GAAAGTTCACATAGGGAAGATGTTGGAGCTGGGAAAACAGCTCAGTGGTTAAGAGTACTTGCTGATGAGTaGCACTGCCTGGGAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESSHREDVGAGKTAQWLRVLADE*HCLGGL Trigger: GAGACCTCCCAGGCAGTGCCACTCATCAGCAAGTAC...TCTTAACCACTGAGCTGTTTTCCCAGCTCCAACATCTTCCCTATGTGAACTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CCA 90 bp | CAGTGGTTAAGAACACTTGCTGCTTTTATAGAGGACATGAGCAACCCACTGTCTAAAAGGAAGACAGTCTaGGCCAGGAGCACGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QWLRTLAAFIEDMSNPLSKRKTV*ARSTLV Trigger: CACCAACGTGCTCCTGGCCCAGACTGTCTTCCTTTT...AGACAGTGGGTTGCTCATGTCCTCTATAAAAGCAGCAAGTGTTCTTAACCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR TCA 90 bp | GAGATAGTAAAACTCAAGAAATCCTTTGTGATCAGTGGGGGTGGGAGGAAGTATCAGGAAGGAAGTAGATaGGGATGGCGACTGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EIVKLKKSFVISGGGRKYQEGSR*GWRLRR Trigger: TCTCCTCAGTCGCCATCCTCATCTACTTCCTTCCTG...ATACTTCCTCCCACCCCCACTGATCACAAAGGATTTCTTGAGTTTTACTATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS GCA 90 bp | CAGGTCCGCAAGCAGACGCTCCTCTTGGTTGCGGCTCTGGGCCCCTaGAACAGAAGGAGGGGGTTCGCTCCAGAGGAGGAGGAGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QVRKQTLLLVAALGP*NRRRGFAPEEEEAQ Trigger: CTGTGCCTCCTCCTCCTCTGGAGCGAACCCCCTCCTTCTGTTGCAGGGGCCCAGAGCCGCAACCAAGAGGAGCGTCTGCTTGCGGACCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186038.2 |
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| CDS GCA 90 bp | CGGAACCGGGCATCCTGGACAGCAGCTGGAGCTAGTGGGCGCACATaGATCCGTAACAGCTGGGGCAGGAGCCTCAGGAACACCTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RNRASWTAAGASGRT*IRNSWGRSLRNTLR Trigger: CCGCAAGGTGTTCCTGAGGCTCCTGCCCCAGCTGTTACGGATGCATGTGCGCCCACTAGCTCCAGCTGCTGTCCAGGATGCCCGGTTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CCA 90 bp | TGGACAGCAGCTGGAGCTAGTGGGCGCACATGCATCCGTAACAGCTaGGGCAGGAGCCTCAGGAACACCTTGCGGACCCCACGGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: WTAAGASGRTCIRNS*GRSLRNTLRTPRAM Trigger: CATGGCCCGTGGGGTCCGCAAGGTGTTCCTGAGGCTCCTGCCCCAGCTGTTACGGATGCATGTGCGCCCACTAGCTCCAGCTGCTGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CCA 90 bp | TTTCGCATCAGGTCCGCAAGCAGACGCTCCTCTTGGTTGCGGCTCTaGGCCCCTGCAACAGAAGGAGGGGGTTCGCTCCAGAGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FRIRSASRRSSWLRL*APATEGGGSLQRRR Trigger: CCTCCTCCTCTGGAGCGAACCCCCTCCTTCTGTTGCAGGGGCCCAGAGCCGCAACCAAGAGGAGCGTCTGCTTGCGGACCTGATGCGAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186038.2 |
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| CDS TCA 90 bp | AGGCAGACAGAGGTCCCCTTCCTCTCGAGCCATGATGGGCCACCCTaGGGAAGAGCCATTCTGGAGTCGGAACCGGGCATCCTGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RQTEVPFLSSHDGPP*GRAILESEPGILDS Trigger: GCTGTCCAGGATGCCCGGTTCCGACTCCAGAATGGCTCTTCCTCAGGGTGGCCCATCATGGCTCGAGAGGAAGGGGACCTCTGTCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS TCA 90 bp | GGAGTTCGCTTCGAGGCAGACAGAGGTCCCCTTCCTCTCGAGCCATaGTGGGCCACCCTGAGGAAGAGCCATTCTGGAGTCGGAACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GVRFEADRGPLPLEP*WATLRKSHSGVGTG Trigger: CCCGGTTCCGACTCCAGAATGGCTCTTCCTCAGGGTGGCCCATCATGGCTCGAGAGGAAGGGGACCTCTGTCTGCCTCGAAGCGAACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS GCA 90 bp | TCCTCTGCAGGAGCCACGGAGTCCAGGAGCATTTTAGCCGGTCGGTaGCGGATGGCCCACTCCCCATTCTCTGTGAAAGCCTCCGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSAGATESRSILAGR*RMAHSPFSVKASGS Trigger: TGACCCGGAGGCTTTCACAGAGAATGGGGAGTGGGCCATCCGGCACCGACCGGCTAAAATGCTCCTGGACTCCGTGGCTCCTGCAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS GCA 90 bp | CTGGATAAGCAGGTAGAACACCACCTTCTGGTGGCCCGCCTCCTCTaGAGGAGCCACGGAGTCCAGGAGCATTTTAGCCGGTCGGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LDKQVEHHLLVARLL*RSHGVQEHFSRSVP Trigger: CGGCACCGACCGGCTAAAATGCTCCTGGACTCCGTGGCTCCTGCAGAGGAGGCGGGCCACCAGAAGGTGGTGTTCTACCTGCTTATCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CCA 90 bp | AGCCTCAGGAACACCTTGCGGACCCCACGGGCCATGGAGTGTGTGTaGGGGGACCGCAAGGACACATTGAGCACGACCACAGAGTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: SLRNTLRTPRAMECV*GDRKDTLSTTTEFT Trigger: CGTGAACTCTGTGGTCGTGCTCAATGTGTCCTTGCGGTCCCCCCACACACACTCCATGGCCCGTGGGGTCCGCAAGGTGTTCCTGAGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CCA 90 bp | GGCCACCCTGAGGAAGAGCCATTCTGGAGTCGGAACCGGGCATCCTaGACAGCAGCTGGAGCTAGTGGGCGCACATGCATCCGTAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHPEEEPFWSRNRAS*TAAGASGRTCIRNS Trigger: GCTGTTACGGATGCATGTGCGCCCACTAGCTCCAGCTGCTGTCCAGGATGCCCGGTTCCGACTCCAGAATGGCTCTTCCTCAGGGTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS TCA 90 bp | AGCACTCGGCCCACCAGCAACCACTCCTCGTTCCCACTGTCAAAGTaGCTCTGCTGGCGTCGGGCACGAGCCATGAGGTTACAGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: STRPTSNHSSFPLSK*LCWRRARAMRLQAS Trigger: GGATGCCTGTAACCTCATGGCTCGTGCCCGACGCCAGCAGAGTCACTTTGACAGTGGGAACGAGGAGTGGTTGCTGGTGGGCCGAGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS GCA 90 bp | GGTCGTAGTTTCGCATCAGGTCCGCAAGCAGACGCTCCTCTTGGTTaGGGCTCTGGGCCCTTGGGCCACCTGTCATGTGGCCAACTATTT | + |
|
Preference number: 5 (lower is better) Translates to: GRSFASGPQADAPLG*GSGPLGHLSCGQLF Trigger: AAATAGTTGGCCACATGACAGGTGGCCCAAGGGCCCAGAGCCGCAACCAAGAGGAGCGTCTGCTTGCGGACCTGATGCGAAACTACGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185763.7 |
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| CDS TCA 90 bp | GATGAGGTTGGTCAAGGTAAGCTTCAGGCTGACATTGACCACATCTaGGTCGCGCTCAGCCGGCCGCAGGTGGGGGTCGTAGTTTCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: DEVGQGKLQADIDHI*VALSRPQVGVVVSH Trigger: ATGCGAAACTACGACCCCCACCTGCGGCCGGCTGAGCGCGACTCAGATGTGGTCAATGTCAGCCTGAAGCTTACCTTGACCAACCTCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027470.14 ENSMUST00000185763.7 ENSMUST00000186038.2 ENSMUST00000188796.7 |
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| CDS GCA 90 bp | ATGGCTGGGGAGGCTTGCTTCAGGCTGCCACAGAACTCCTGGCTCTaGCTCACTTCTGGACCATTCTCTAGCTTCTCCAATACTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MAGEACFRLPQNSWL*LTSGPFSSFSNTAC Trigger: GCAGGCAGTATTGGAGAAGCTAGAGAATGGTCCAGAAGTGAGGCAGAGCCAGGAGTTCTGTGGCAGCCTGAAGCAAGCCTCCCCAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CCA 90 bp | GCCTGGATGGCTGGGGAGGCTTGCTTCAGGCTGCCACAGAACTCCTaGCTCTGCCTCACTTCTGGACCATTCTCTAGCTTCTCCAATACT | + |
|
Preference number: 5 (lower is better) Translates to: AWMAGEACFRLPQNS*LCLTSGPFSSFSNT Trigger: AGTATTGGAGAAGCTAGAGAATGGTCCAGAAGTGAGGCAGAGCCAGGAGTTCTGTGGCAGCCTGAAGCAAGCCTCCCCAGCCATCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CCA 90 bp | AGCCACCTCGAAGACACCGTCCACATTGTTCTCCAGGACGATATCTaGCCGCCAGACCATAGTAGATGGCACCCTCAATATCCACAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHLEDTVHIVLQDDI*PPDHSRWHPQYPQA Trigger: GGCCTGTGGATATTGAGGGTGCCATCTACTATGGTCTGGCGGCCAGATATCGTCCTGGAGAACAATGTGGACGGTGTCTTCGAGGTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027470.14 ENSMUST00000185763.7 ENSMUST00000186038.2 |
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| CDS GCA 90 bp | TTCTCTGTGAAAGCCTCCGGGTCAATGAAGATCCACTCAATGGCTTaGCCATCCTCCTGGCTCAGCTGCAAGTTGATCTCACTGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSVKASGSMKIHSMA*PSSWLSCKLISLVL Trigger: CAGCACCAGTGAGATCAACTTGCAGCTGAGCCAGGAGGATGGGCAAGCCATTGAGTGGATCTTCATTGACCCGGAGGCTTTCACAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS GCA 90 bp | TCTAGCTTCTCCAATACTGCCTGCACTAATCCATTGCGCTGCCTTTaGCTAAAGAGGAGTTCGCTTCGAGGCAGACAGAGGTCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSFSNTACTNPLRCL*LKRSSLRGRQRSPS Trigger: GGAAGGGGACCTCTGTCTGCCTCGAAGCGAACTCCTCTTTAGGCAAAGGCAGCGCAATGGATTAGTGCAGGCAGTATTGGAGAAGCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CCA 90 bp | CTCACTGGTGCTGTAAGTCTGGGATTTGTTCTCCAGGACGATATCTaGCCGCCAGACCATAGTAGATGGCACCCTCAATATCCACAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTGAVSLGFVLQDDI*PPDHSRWHPQYPQA Trigger: GGCCTGTGGATATTGAGGGTGCCATCTACTATGGTCTGGCGGCCAGATATCGTCCTGGAGAACAAATCCCAGACTTACAGCACCAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188796.7 |
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| CDS-3UTR CAA 90 bp | GCCAGAGGAGGGTGTTGGATCGCCTGCAACTGGAGTAACAGATGCTACATGGGTTTCAGGGAGATGAGGTaGGTCAAGGTAAGCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARGGCWIACNWSNRCYMGFREMR*VKVSFR Trigger: CCTGAAGCTTACCTTGACCAACCTCATCTCCCTGAA...ACCCATGTAGCATCTGTTACTCCAGTTGCAGGCGATCCAACACCCTCCTCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CAA 90 bp | AACCTTGCCCAGTCAATGACATCAGGAAAGGCAGAGCTCTTAGGGCTTCAAAGTTGGGCCAGGAGCACGTaGGTGGCCACTGTGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: NLAQSMTSGKAELLGLQSWARST*VATVHF Trigger: GAAATGCACAGTGGCCACCAACGTGCTCCTGGCCCA...ACTTTGAAGCCCTAAGAGCTCTGCCTTTCCTGATGTCATTGACTGGGCAAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CAA 90 bp | ACATCAGGAAAGGCAGAGCTCTTAGGGCTTCAAAGTGACCTATCAGAACTGCTCCGGCAGGTCAGGCACTaGGTTGTAGTGGGCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSGKAELLGLQSDLSELLRQVRH*VVVGHE Trigger: CTCATGGCCCACTACAACCAAGTGCCTGACCTGCCG...GAGCAGTTCTGATAGGTCACTTTGAAGCCCTAAGAGCTCTGCCTTTCCTGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS TCA 90 bp | AGATCCACTCAATGGCTTGCCCATCCTCCTGGCTCAGCTGCAAGTTaGTCTCACTGGTGCTGTAAGTCTGGGATTTGTTCTCCAGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: RSTQWLAHPPGSAAS*SHWCCKSGICSPGR Trigger: TCGTCCTGGAGAACAAATCCCAGACTTACAGCACCAGTGAGATCAACTTGCAGCTGAGCCAGGAGGATGGGCAAGCCATTGAGTGGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188796.7 |
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| CDS GCA 90 bp | CCATTCTCTAGCTTCTCCAATACTGCCTGCACTAATCCATTGCGCTaGCTTTGCCTAAAGAGGAGTTCGCTTCGAGGCAGACAGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PFSSFSNTACTNPLR*LCLKRSSLRGRQRS Trigger: GGACCTCTGTCTGCCTCGAAGCGAACTCCTCTTTAGGCAAAGGCAGCGCAATGGATTAGTGCAGGCAGTATTGGAGAAGCTAGAGAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CCA 90 bp | CATAGTAGATGGCACCCTCAATATCCACAGGCCTTCGTAGTCTTTTaGGTCCCAGCGCAGGCGATAGTCGCACCATTGCATCTCTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSRWHPQYPQAFVVF*VPAQAIVAPLHLYP Trigger: TGGATAGAGATGCAATGGTGCGACTATCGCCTGCGCTGGGACCCAAAAGACTACGAAGGCCTGTGGATATTGAGGGTGCCATCTACTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027470.14 ENSMUST00000185763.7 ENSMUST00000186038.2 ENSMUST00000188796.7 |
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| CDS CCA 90 bp | CACATTGTTCTCCAGGACGATATCTGGCCGCCAGACCATAGTAGATaGCACCCTCAATATCCACAGGCCTTCGTAGTCTTTTGGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HIVLQDDIWPPDHSR*HPQYPQAFVVFWVP Trigger: TGGGACCCAAAAGACTACGAAGGCCTGTGGATATTGAGGGTGCCATCTACTATGGTCTGGCGGCCAGATATCGTCCTGGAGAACAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027470.14 ENSMUST00000185763.7 ENSMUST00000186038.2 |
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| CDS CCA 90 bp | GGATTTGTTCTCCAGGACGATATCTGGCCGCCAGACCATAGTAGATaGCACCCTCAATATCCACAGGCCTTCGTAGTCTTTTGGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GFVLQDDIWPPDHSR*HPQYPQAFVVFWVP Trigger: TGGGACCCAAAAGACTACGAAGGCCTGTGGATATTGAGGGTGCCATCTACTATGGTCTGGCGGCCAGATATCGTCCTGGAGAACAAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188796.7 |
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| CDS-3UTR CAA 90 bp | CCATACCCATCACCAACCACTGCAGAAATCCCCCTCTGTCTCTTTATTTCTCTAGATGGCTGGGGAGGCTaGCTTCAGGCTGCCACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PYPSPTTAEIPLCLFISLDGWGG*LQAATE Trigger: TTCTGTGGCAGCCTGAAGCAAGCCTCCCCAGCCATC...TAGAGAAATAAAGAGACAGAGGGGGATTTCTGCAGTGGTTGGTGATGGGTATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CAA 90 bp | GAACCTTCTAGAGAAAGTTCACATAGGGAAGATGTTGGAGCTGGGAAAACAGCTGGCCTTCGTAGTCTTTaGGGTCCCAGCGCAGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: EPSRESSHREDVGAGKTAGLRSL*GPSAGD Trigger: ATCGCCTGCGCTGGGACCCAAAAGACTACGAAGGCC...AGCTGTTTTCCCAGCTCCAACATCTTCCCTATGTGAACTTTCTCTAGAAGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CAA 90 bp | GAAAGTTCACATAGGGAAGATGTTGGAGCTGGGAAAACAGCTCAGTGGTTAAGAGATCCACTCAATGGCTaGCCCATCCTCCTGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ESSHREDVGAGKTAQWLRDPLNG*PILLAQ Trigger: CTGAGCCAGGAGGATGGGCAAGCCATTGAGTGGATC...TCTTAACCACTGAGCTGTTTTCCCAGCTCCAACATCTTCCCTATGTGAACTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CAA 90 bp | GAAAGTTCACATAGGGAAGATGTTGGAGCTGGGAAAACAGCTCAGTGGTTAAGAGACCGCAAGGACACATaGAGCACGACCACAGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESSHREDVGAGKTAQWLRDRKDT*STTTEF Trigger: GAACTCTGTGGTCGTGCTCAATGTGTCCTTGCGGTC...TCTTAACCACTGAGCTGTTTTCCCAGCTCCAACATCTTCCCTATGTGAACTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CAA 90 bp | GAAAGTTCACATAGGGAAGATGTTGGAGCTGGGAAAACAGCTCAGTGGTTAAGAGCTGTAAGTCTGGGATaGGAAGACGAGGGAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESSHREDVGAGKTAQWLRAVSLG*EDEGTV Trigger: AACTGTTCCCTCGTCTTCCAATCCCAGACTTACAGC...TCTTAACCACTGAGCTGTTTTCCCAGCTCCAACATCTTCCCTATGTGAACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CAA 90 bp | ATTTGTGCTGTGGCATCTAGAAGAACCTTGCTAGTTAAAATGGGTTACACTTTTAGCTTCAGGCTGACATaGACCACATCTGAGTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ICAVASRRTLLVKMGYTFSFRLT*TTSESR Trigger: GCGCGACTCAGATGTGGTCAATGTCAGCCTGAAGCT...AAAAGTGTAACCCATTTTAACTAGCAAGGTTCTTCTAGATGCCACAGCACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS-3UTR CAA 90 bp | ATTTGTGCTGTGGCATCTAGAAGAACCTTGCTAGTTAAAATGGGTTACACTTTTAGGAAGGTCAGGTACTaGCTGATGAGTGGCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ICAVASRRTLLVKMGYTFRKVRY*LMSGTA Trigger: GGCAGTGCCACTCATCAGCAAGTACCTGACCTTCCT...AAAAGTGTAACCCATTTTAACTAGCAAGGTTCTTCTAGATGCCACAGCACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS GCA 72 bp | TTCGCATCAGGTCCGCAAGCAGACGCTCCTCTTGGTTaGGGCTCTGGGCCCCCAGGCAGACAGCCAACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FASGPQADAPLG*GSGPPGRQPTA Trigger: TGCTGTTGGCTGTCTGCCTGGGGGCCCAGAGCCGCAACCAAGAGGAGCGTCTGCTTGCGGACCTGATGCGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027470.14 ENSMUST00000188796.7 |
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| CDS GCA 72 bp | TTCGCATCAGGTCCGCAAGCAGACGCTCCTCTTGGTTaGGGCTCTGGGCCCTTGGGCCACCTGTCATGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FASGPQADAPLG*GSGPLGHLSCG Trigger: GCCACATGACAGGTGGCCCAAGGGCCCAGAGCCGCAACCAAGAGGAGCGTCTGCTTGCGGACCTGATGCGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185763.7 |
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| CDS CAA 72 bp | TTTCGCATCAGGTCCGCAAGCAGACGCTCCTCTTGGTaGCGGCTCTGGGCCCCCAGGCAGACAGCCAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: FRIRSASRRSSW*RLWAPRQTANS Trigger: GCTGTTGGCTGTCTGCCTGGGGGCCCAGAGCCGCAACCAAGAGGAGCGTCTGCTTGCGGACCTGATGCGAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027470.14 ENSMUST00000188796.7 |
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| CDS CAA 90 bp | GTGGGGGTCGTAGTTTCGCATCAGGTCCGCAAGCAGACGCTCCTCTaGGTTGCGGCTCTGGGCCCTTGGGCCACCTGTCATGTGGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: VGVVVSHQVRKQTLL*VAALGPWATCHVAN Trigger: GTTGGCCACATGACAGGTGGCCCAAGGGCCCAGAGCCGCAACCAAGAGGAGCGTCTGCTTGCGGACCTGATGCGAAACTACGACCCCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185763.7 |
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| CDS GCA 72 bp | GGAGCCACGGAGTCCAGGAGCATTTTAGCCGGTCGGTaGCGGATGGCCCACTCCCCATTCTCTGTGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GATESRSILAGR*RMAHSPFSVKA Trigger: GGCTTTCACAGAGAATGGGGAGTGGGCCATCCGGCACCGACCGGCTAAAATGCTCCTGGACTCCGTGGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS GCA 72 bp | CAGGTAGAACACCACCTTCTGGTGGCCCGCCTCCTCTaGAGGAGCCACGGAGTCCAGGAGCATTTTAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QVEHHLLVARLL*RSHGVQEHFSR Trigger: CCGGCTAAAATGCTCCTGGACTCCGTGGCTCCTGCAGAGGAGGCGGGCCACCAGAAGGTGGTGTTCTACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS GCA 72 bp | GCATCCTGGACAGCAGCTGGAGCTAGTGGGCGCACATaGATCCGTAACAGCTGGGGCAGGAGCCTCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ASWTAAGASGRT*IRNSWGRSLRN Trigger: GTTCCTGAGGCTCCTGCCCCAGCTGTTACGGATGCATGTGCGCCCACTAGCTCCAGCTGCTGTCCAGGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CAA 72 bp | GTAGTTTCGCATCAGGTCCGCAAGCAGACGCTCCTCTaGGTTGCGGCTCTGGGCCCCCAGGCAGACAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: VVSHQVRKQTLL*VAALGPQADSQ Trigger: TTGGCTGTCTGCCTGGGGGCCCAGAGCCGCAACCAAGAGGAGCGTCTGCTTGCGGACCTGATGCGAAACTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027470.14 ENSMUST00000188796.7 |
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| CDS CAA 90 bp | CTCACCAGGGAGATGAGGTTGGTCAAGGTAAGCTTCAGGCTGACATaGACCACATCTGAGTCGCGCTCAGCCGGCCGCAGGTGGGGGTCG | + |
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Preference number: 6 (lower is better) Translates to: LTREMRLVKVSFRLT*TTSESRSAGRRWGS Trigger: CGACCCCCACCTGCGGCCGGCTGAGCGCGACTCAGATGTGGTCAATGTCAGCCTGAAGCTTACCTTGACCAACCTCATCTCCCTGGTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185763.7 |
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| CDS TCA 72 bp | GGTCAAGGTAAGCTTCAGGCTGACATTGACCACATCTaGGTCGCGCTCAGCCGGCCGCAGGTGGGGGTCGTA | + |
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Preference number: 6 (lower is better) Translates to: GQGKLQADIDHI*VALSRPQVGVV Trigger: TACGACCCCCACCTGCGGCCGGCTGAGCGCGACTCAGATGTGGTCAATGTCAGCCTGAAGCTTACCTTGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027470.14 ENSMUST00000185763.7 ENSMUST00000186038.2 ENSMUST00000188796.7 |
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| CDS CCA 72 bp | GAGGAAGAGCCATTCTGGAGTCGGAACCGGGCATCCTaGACAGCAGCTGGAGCTAGTGGGCGCACATGCATC | + |
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Preference number: 6 (lower is better) Translates to: EEEPFWSRNRAS*TAAGASGRTCI Trigger: GATGCATGTGCGCCCACTAGCTCCAGCTGCTGTCCAGGATGCCCGGTTCCGACTCCAGAATGGCTCTTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CCA 72 bp | AGGTCCGCAAGCAGACGCTCCTCTTGGTTGCGGCTCTaGGCCCTTGGGCCACCTGTCATGTGGCCAACTATT | + |
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Preference number: 6 (lower is better) Translates to: RSASRRSSWLRL*ALGPPVMWPTI Trigger: AATAGTTGGCCACATGACAGGTGGCCCAAGGGCCCAGAGCCGCAACCAAGAGGAGCGTCTGCTTGCGGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185763.7 |
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| CDS CAA 90 bp | CATGAGGTTACAGGCATCCACACAGGCCTGGATGGCTGGGGAGGCTaGCTTCAGGCTGCCACAGAACTCCTGGCTCTGCCTCACTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: HEVTGIHTGLDGWGG*LQAATELLALPHFW Trigger: CCAGAAGTGAGGCAGAGCCAGGAGTTCTGTGGCAGCCTGAAGCAAGCCTCCCCAGCCATCCAGGCCTGTGTGGATGCCTGTAACCTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS TCA 72 bp | TTCGAGGCAGACAGAGGTCCCCTTCCTCTCGAGCCATaGTGGGCCACCCTGAGGAAGAGCCATTCTGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: FEADRGPLPLEP*WATLRKSHSGV Trigger: GACTCCAGAATGGCTCTTCCTCAGGGTGGCCCATCATGGCTCGAGAGGAAGGGGACCTCTGTCTGCCTCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS TCA 72 bp | TGTCAAAGTGACTCTGCTGGCGTCGGGCACGAGCCATaGGGTTACAGGCATCCACACAGGCCTGGATGGCTG | + |
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Preference number: 6 (lower is better) Translates to: CQSDSAGVGHEP*GYRHPHRPGWL Trigger: CAGCCATCCAGGCCTGTGTGGATGCCTGTAACCTCATGGCTCGTGCCCGACGCCAGCAGAGTCACTTTGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS TCA 72 bp | CCCACCAGCAACCACTCCTCGTTCCCACTGTCAAAGTaGCTCTGCTGGCGTCGGGCACGAGCCATGAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: PTSNHSSFPLSK*LCWRRARAMRL Trigger: TAACCTCATGGCTCGTGCCCGACGCCAGCAGAGTCACTTTGACAGTGGGAACGAGGAGTGGTTGCTGGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CAA 90 bp | TCATTCAGGGAGATGAGGTTGGTCAAGGTAAGCTTCAGGCTGACATaGACCACATCTGAGTCGCGCTCAGCCGGCCGCAGGTGGGGGTCG | + |
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Preference number: 6 (lower is better) Translates to: SFREMRLVKVSFRLT*TTSESRSAGRRWGS Trigger: CGACCCCCACCTGCGGCCGGCTGAGCGCGACTCAGATGTGGTCAATGTCAGCCTGAAGCTTACCTTGACCAACCTCATCTCCCTGAATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027470.14 ENSMUST00000186038.2 ENSMUST00000188796.7 |
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| CDS CAA 72 bp | GAGATGAGGTTGGTCAAGGTAAGCTTCAGGCTGACATaGACCACATCTGAGTCGCGCTCAGCCGGCCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: EMRLVKVSFRLT*TTSESRSAGRR Trigger: CCTGCGGCCGGCTGAGCGCGACTCAGATGTGGTCAATGTCAGCCTGAAGCTTACCTTGACCAACCTCATCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027470.14 ENSMUST00000185763.7 ENSMUST00000186038.2 ENSMUST00000188796.7 |
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| CDS GCA 72 bp | GCCAGTAGATACAACCGTCGGGGGACACGAGGACATTaGAGTAGAGAGCCACCTCGAAGACACCGTCCACAT | + |
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Preference number: 6 (lower is better) Translates to: ASRYNRRGTRGH*SREPPRRHRPH Trigger: ATGTGGACGGTGTCTTCGAGGTGGCTCTCTACTGCAATGTCCTCGTGTCCCCCGACGGTTGTATCTACTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027470.14 ENSMUST00000185763.7 ENSMUST00000186038.2 |
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| CDS CAA 72 bp | CAAGCAGACGCTCCTCTTGGTTGCGGCTCTGGGCCCTaGGGCCACCTGTCATGTGGCCAACTATTTCAAACA | + |
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Preference number: 6 (lower is better) Translates to: QADAPLGCGSGP*GHLSCGQLFQT Trigger: TGTTTGAAATAGTTGGCCACATGACAGGTGGCCCAAGGGCCCAGAGCCGCAACCAAGAGGAGCGTCTGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185763.7 |
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| CDS CAA 90 bp | GCAAGTCTGTGGCCCTGTGTGATATCCATCATTCCCCGCCTCCTGTaGCTCACCAGGGAGATGAGGTTGGTCAAGGTAAGCTTCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ASLWPCVISIIPRLL*LTREMRLVKVSFRL Trigger: CAGCCTGAAGCTTACCTTGACCAACCTCATCTCCCTGGTGAGCAACAGGAGGCGGGGAATGATGGATATCACACAGGGCCACAGACTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185763.7 |
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| CDS GCA 72 bp | CATGAGGAAGGTCAGGTACTTGCTGATGAGTGGCACTaGCTGGGAGGTCTCAGGCACCTTCTTAGCCACAAG | + |
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Preference number: 6 (lower is better) Translates to: HEEGQVLADEWH*LGGLRHLLSHK Trigger: CTTGTGGCTAAGAAGGTGCCTGAGACCTCCCAGGCAGTGCCACTCATCAGCAAGTACCTGACCTTCCTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CCA 72 bp | TGGCACCCTCAATATCCACAGGCCTTCGTAGTCTTTTaGGTCCCAGCGCAGGCGATAGTCGCACCATTGCAT | + |
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Preference number: 6 (lower is better) Translates to: WHPQYPQAFVVF*VPAQAIVAPLH Trigger: ATGCAATGGTGCGACTATCGCCTGCGCTGGGACCCAAAAGACTACGAAGGCCTGTGGATATTGAGGGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027470.14 ENSMUST00000185763.7 ENSMUST00000186038.2 ENSMUST00000188796.7 |
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| CDS CAA 72 bp | ATGGCACCCTCAATATCCACAGGCCTTCGTAGTCTTTaGGGTCCCAGCGCAGGCGATAGTCGCACCATTGCA | + |
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Preference number: 6 (lower is better) Translates to: MAPSISTGLRSL*GPSAGDSRTIA Trigger: TGCAATGGTGCGACTATCGCCTGCGCTGGGACCCAAAAGACTACGAAGGCCTGTGGATATTGAGGGTGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027470.14 ENSMUST00000185763.7 ENSMUST00000186038.2 ENSMUST00000188796.7 |
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| CDS CAA 72 bp | TGGCCCTGTGTGATATCCATCATTCCCCGCCTCCTGTaGCTCACCAGGGAGATGAGGTTGGTCAAGGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: WPCVISIIPRLL*LTREMRLVKVS Trigger: GCTTACCTTGACCAACCTCATCTCCCTGGTGAGCAACAGGAGGCGGGGAATGATGGATATCACACAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185763.7 |
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| CDS CCA 72 bp | AGGAAGGTCAGGTACTTGCTGATGAGTGGCACTGCCTaGGAGGTCTCAGGCACCTTCTTAGCCACAAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: RKVRYLLMSGTA*EVSGTFLATRK Trigger: TTTCCTTGTGGCTAAGAAGGTGCCTGAGACCTCCCAGGCAGTGCCACTCATCAGCAAGTACCTGACCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CAA 72 bp | ATTCCCCGCCTCCTGTTGCTCACCAGGGAGATGAGGTaGGTCAAGGTAAGCTTCAGGCTGACATTGACCACA | + |
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Preference number: 6 (lower is better) Translates to: IPRLLLLTREMR*VKVSFRLTLTT Trigger: TGTGGTCAATGTCAGCCTGAAGCTTACCTTGACCAACCTCATCTCCCTGGTGAGCAACAGGAGGCGGGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185763.7 |
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| CDS GCA 72 bp | AAAGCCTCCGGGTCAATGAAGATCCACTCAATGGCTTaGCCATCCTCCTGGCTCAGCTGCAAGTTGATCTCA | + |
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Preference number: 6 (lower is better) Translates to: KASGSMKIHSMA*PSSWLSCKLIS Trigger: TGAGATCAACTTGCAGCTGAGCCAGGAGGATGGGCAAGCCATTGAGTGGATCTTCATTGACCCGGAGGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS GCA 72 bp | TCCAATACTGCCTGCACTAATCCATTGCGCTGCCTTTaGCTAAAGAGGAGTTCGCTTCGAGGCAGACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SNTACTNPLRCL*LKRSSLRGRQR Trigger: CCTCTGTCTGCCTCGAAGCGAACTCCTCTTTAGGCAAAGGCAGCGCAATGGATTAGTGCAGGCAGTATTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CCA 72 bp | CTCCAGGACGATATCTGGCCGCCAGACCATAGTAGATaGCACCCTCAATATCCACAGGCCTTCGTAGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LQDDIWPPDHSR*HPQYPQAFVVF Trigger: AAAGACTACGAAGGCCTGTGGATATTGAGGGTGCCATCTACTATGGTCTGGCGGCCAGATATCGTCCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027470.14 ENSMUST00000185763.7 ENSMUST00000186038.2 ENSMUST00000188796.7 |
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| CDS CAA 72 bp | GTGAGGGCCTCCTCTCGTTCATTCAGGGAGATGAGGTaGGTCAAGGTAAGCTTCAGGCTGACATTGACCACA | + |
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Preference number: 6 (lower is better) Translates to: VRASSRSFREMR*VKVSFRLTLTT Trigger: TGTGGTCAATGTCAGCCTGAAGCTTACCTTGACCAACCTCATCTCCCTGAATGAACGAGAGGAGGCCCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027470.14 ENSMUST00000186038.2 ENSMUST00000188796.7 |
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| CDS CAA 90 bp | ATTCTCTGTGAAAGCCTCCGGGTCAATGAAGATCCACTCAATGGCTaGCCCATCCTCCTGGCTCAGCTGCAAGTTGATCTCACTGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: ILCESLRVNEDPLNG*PILLAQLQVDLTGA Trigger: AGCACCAGTGAGATCAACTTGCAGCTGAGCCAGGAGGATGGGCAAGCCATTGAGTGGATCTTCATTGACCCGGAGGCTTTCACAGAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CAA 90 bp | ATATCCATCATTCCCCGCCTCCTGTTGCTCACCAGGGAGATGAGGTaGGTCAAGGTAAGCTTCAGGCTGACATTGACCACATCTGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: ISIIPRLLLLTREMR*VKVSFRLTLTTSES Trigger: CGACTCAGATGTGGTCAATGTCAGCCTGAAGCTTACCTTGACCAACCTCATCTCCCTGGTGAGCAACAGGAGGCGGGGAATGATGGATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185763.7 |
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| CDS CAA 90 bp | ACGTTAGTTGTGAGGGCCTCCTCTCGTTCATTCAGGGAGATGAGGTaGGTCAAGGTAAGCTTCAGGCTGACATTGACCACATCTGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: TLVVRASSRSFREMR*VKVSFRLTLTTSES Trigger: CGACTCAGATGTGGTCAATGTCAGCCTGAAGCTTACCTTGACCAACCTCATCTCCCTGAATGAACGAGAGGAGGCCCTCACAACTAACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027470.14 ENSMUST00000186038.2 ENSMUST00000188796.7 |
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| CDS CAA 90 bp | TCTGGACCATTCTCTAGCTTCTCCAATACTGCCTGCACTAATCCATaGCGCTGCCTTTGCCTAAAGAGGAGTTCGCTTCGAGGCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: SGPFSSFSNTACTNP*RCLCLKRSSLRGRQ Trigger: CTGTCTGCCTCGAAGCGAACTCCTCTTTAGGCAAAGGCAGCGCAATGGATTAGTGCAGGCAGTATTGGAGAAGCTAGAGAATGGTCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS GCA 72 bp | AGCTTCTCCAATACTGCCTGCACTAATCCATTGCGCTaGCTTTGCCTAAAGAGGAGTTCGCTTCGAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SFSNTACTNPLR*LCLKRSSLRGR Trigger: TCTGCCTCGAAGCGAACTCCTCTTTAGGCAAAGGCAGCGCAATGGATTAGTGCAGGCAGTATTGGAGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CCA 72 bp | GAAGACACCGTCCACATTGTTCTCCAGGACGATATCTaGCCGCCAGACCATAGTAGATGGCACCCTCAATAT | + |
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Preference number: 6 (lower is better) Translates to: EDTVHIVLQDDI*PPDHSRWHPQY Trigger: ATATTGAGGGTGCCATCTACTATGGTCTGGCGGCCAGATATCGTCCTGGAGAACAATGTGGACGGTGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027470.14 ENSMUST00000185763.7 ENSMUST00000186038.2 |
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| CDS CCA 72 bp | GCTGTAAGTCTGGGATTTGTTCTCCAGGACGATATCTaGCCGCCAGACCATAGTAGATGGCACCCTCAATAT | + |
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Preference number: 6 (lower is better) Translates to: AVSLGFVLQDDI*PPDHSRWHPQY Trigger: ATATTGAGGGTGCCATCTACTATGGTCTGGCGGCCAGATATCGTCCTGGAGAACAAATCCCAGACTTACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188796.7 |
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| CDS GCA 72 bp | ACTTCTGGACCATTCTCTAGCTTCTCCAATACTGCCTaGACTAATCCATTGCGCTGCCTTTGCCTAAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: TSGPFSSFSNTA*TNPLRCLCLKR Trigger: CCTCTTTAGGCAAAGGCAGCGCAATGGATTAGTGCAGGCAGTATTGGAGAAGCTAGAGAATGGTCCAGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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| CDS CAA 72 bp | TTCTCTAGCTTCTCCAATACTGCCTGCACTAATCCATaGCGCTGCCTTTGCCTAAAGAGGAGTTCGCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: FSSFSNTACTNP*RCLCLKRSSLR Trigger: TCGAAGCGAACTCCTCTTTAGGCAAAGGCAGCGCAATGGATTAGTGCAGGCAGTATTGGAGAAGCTAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027470.14 |
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