Pregenerated sensors for CHRNE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014609Ensembl transcript IDs: ENSMUST00000014753.9, ENSMUST00000102556.10
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGGGATCCTCTGGGGGTaGGCTCGAGCCCAGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: VHKPDLLSAACFQNLFLGGILWG*ARAQET Trigger: CGTCTCCTGGGCTCGAGCCCACCCCCAGAGGATCCC...CCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAAC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | TCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGGGCAGCACCCAGGTTCTaGCAGAGGGCTGCTGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQTRFIVSGLFSKSLSWGAAPRF*QRAAAV Trigger: GACCGCAGCAGCCCTCTGCCAGAACCTGGGTGCTGC...CCCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000014753.9 |
||
| CDS-3UTR GCA 90 bp | GTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGCCTCCACTGCGCAGGTaGTGCGGTAGATGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHKPDLLSAACFQNLFLGPPLRR*CGRWLG Trigger: CCCCAGCCATCTACCGCAGCACCTGCGCAGTGGAGG...CCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | GCAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTGGGATCCTCTGGGGGTaGGCTCGAGCCCAGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: ASSQTRFIVSGLFSKSLSGILWG*ARAQET Trigger: CGTCTCCTGGGCTCGAGCCCACCCCCAGAGGATCCC...AGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | TCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGGGCAGCACCCAGGTTCTaGCAGAGGGCTGCGGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQTRFIVSGLFSKSLSWGAAPRF*QRAAVQ Trigger: TTGGACCGCAGCCCTCTGCCAGAACCTGGGTGCTGC...CCCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102556.10 |
||
| CDS-3UTR TCA 90 bp | TTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGCCGTGCCGATGCCTCTaGCCCTCAAACACGAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FTNQIYCQRPVFKISFLGPCRCL*PSNTSS Trigger: CGAACTCGTGTTTGAGGGTCAGAGGCATCGGCACGG...CCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR GCA 90 bp | CAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTCCACTGCGCAGGTGCTaGGGTAGATGGCTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVHKPDLLSAACFQNLFLPLRRC*GRWLGA Trigger: TGCCCCCAGCCATCTACCGCAGCACCTGCGCAGTGG...AAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR GCA 90 bp | CAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTCCTCCACTGCGCAGGTaGTGCGGTAGATGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QVHKPDLLSAACFQNLFLPPLRR*CGRWLG Trigger: CCCCAGCCATCTACCGCAGCACCTGCGCAGTGGAGG...AAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR GCA 90 bp | AAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGCTGGCAGAGGGCTGCTaGGGTCCAAGTTCCGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KFTNQIYCQRPVFKISFLLAEGC*GPSSVP Trigger: CGGCACGGAACTTGGACCGCAGCAGCCCTCTGCCAG...CAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014753.9 |
||
| CDS-3UTR CCA 90 bp | TCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGGCTCCAGGACCTTCTGTaGAACCTCCCTCATAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQTRFIVSGLFSKSLSWGLQDLL*NLPHSG Trigger: GCCGCTATGAGGGAGGTTCCACAGAAGGTCCTGGAG...CCCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | AGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGAGACCGTGCATTTCTaGCCACCAGCCTGCGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSQTRFIVSGLFSKSLSWETVHF*PPACAG Trigger: GCCTGCGCAGGCTGGTGGCCAGAAATGCACGGTCTC...CCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR TCA 90 bp | TCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGGCGTCCTTGCTGTAGTTaGGCCGATAGTCGTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQTRFIVSGLFSKSLSWGRPCCS*ADSRAS Trigger: ACTGGCACGACTATCGGCTCAACTACAGCAAGGACG...CCCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR TCA 90 bp | GTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGCAAAGGGGAAATAGGTaGCCTCCACTGCGCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHKPDLLSAACFQNLFLGQRGNR*PPLRRC Trigger: GCACCTGCGCAGTGGAGGTCACCTATTTCCCCTTTG...CCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR TCA 90 bp | GCAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTCAAAGGGGAAATAGGTaGCCTCCACTGCGCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSQTRFIVSGLFSKSLSQRGNR*PPLRRC Trigger: GCACCTGCGCAGTGGAGGTCACCTATTTCCCCTTTG...AGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR TCA 90 bp | CAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTCCGTGCCGATGCCTCTaGCCCTCAAACACGAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QVHKPDLLSAACFQNLFLPCRCL*PSNTSS Trigger: CGAACTCGTGTTTGAGGGTCAGAGGCATCGGCACGG...AAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | GCAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTCTCCAGGACCTTCTGTaGAACCTCCCTCATAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSQTRFIVSGLFSKSLSLQDLL*NLPHSG Trigger: GCCGCTATGAGGGAGGTTCCACAGAAGGTCCTGGAG...AGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | AGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGACAGCAGCGGATTTCTaGGGCTGCAGCACCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSQTRFIVSGLFSKSLSWTAADF*GCSTQV Trigger: AACCTGGGTGCTGCAGCCCCAGAAATCCGCTGCTGT...CCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | GTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGTCTCCAGTGGCTTCCTaGTCTCTTGTGCTCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VHKPDLLSAACFQNLFLGSPVAS*SLVLSA Trigger: GGCTGAGAGCACAAGAGACCAGGAAGCCACTGGAGA...CCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR TCA 90 bp | GCAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTCGTCCTTGCTGTAGTTaGGCCGATAGTCGTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASSQTRFIVSGLFSKSLSRPCCS*ADSRAS Trigger: ACTGGCACGACTATCGGCTCAACTACAGCAAGGACG...AGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR TCA 90 bp | TCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGGTCTGGGAGCGAAAAATaGGAGAGCAGTTCTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQTRFIVSGLFSKSLSWGSGSEK*ESSSAS Trigger: ACTGGCAGAACTGCTCTCTCATTTTTCGCTCCCAGA...CCCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR GCA 90 bp | GTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGAGTCGTGCCAGTCAATaGCAATCCAGACACTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHKPDLLSAACFQNLFLGSRASQ*QSRHWW Trigger: CCACCAGTGTCTGGATTGGCATTGACTGGCACGACT...CCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR GCA 90 bp | AGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGATAGGTGACCTCCACTaGGCAGGTGCTGCGGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSQTRFIVSGLFSKSLSWIGDLH*AGAAVD Trigger: ATCTACCGCAGCACCTGCGCAGTGGAGGTCACCTAT...CCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR GCA 90 bp | GCAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTATAGGTGACCTCCACTaGGCAGGTGCTGCGGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASSQTRFIVSGLFSKSLSIGDLH*AGAAVD Trigger: ATCTACCGCAGCACCTGCGCAGTGGAGGTCACCTAT...AGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | AGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGATACCTGCCCAGCAGTaGCACGCTCAGAGAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSQTRFIVSGLFSKSLSWIPAQQ*HAQRSL Trigger: GAGACTTCTCTGAGCGTGCCACTGCTGGGCAGGTAT...CCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGACAGCAGCGGATTTCTaGGGCTGCAGCACCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KFTNQIYCQRPVFKISFLTAADF*GCSTQV Trigger: AACCTGGGTGCTGCAGCCCCAGAAATCCGCTGCTGT...CAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | GCAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTCTCCAGTGGCTTCCTaGTCTCTTGTGCTCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASSQTRFIVSGLFSKSLSSPVAS*SLVLSA Trigger: GGCTGAGAGCACAAGAGACCAGGAAGCCACTGGAGA...AGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | TTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGACAGTTCCTCTCCAGTaGCTTCCTGGTCTCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTNQIYCQRPVFKISFLGTVPLQ*LPGLLC Trigger: GCACAAGAGACCAGGAAGCCACTGGAGAGGAACTGT...CCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR TCA 90 bp | GCAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTCATCCACGGCAAAGATaGACTCCACCTCCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASSQTRFIVSGLFSKSLSHPRQR*TPPPQH Trigger: ATGCTGAGGAGGTGGAGTTCATCTTTGCCGTGGATG...AGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGATACCTGCCCAGCAGTaGCACGCTCAGAGAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KFTNQIYCQRPVFKISFLIPAQQ*HAQRSL Trigger: GAGACTTCTCTGAGCGTGCCACTGCTGGGCAGGTAT...CAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR TCA 90 bp | AAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGCATCCACGGCAAAGATaGACTCCACCTCCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KFTNQIYCQRPVFKISFLHPRQR*TPPPQH Trigger: ATGCTGAGGAGGTGGAGTTCATCTTTGCCGTGGATG...CAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR GCA 90 bp | GTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGTCTTTCCCTGGCTTCTaGCAAAGAGTGTCAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHKPDLLSAACFQNLFLGSFPGF*QRVSGE Trigger: TTCTCCTGACACTCTTTGGCAGAAGCCAGGGAAAGA...CCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR GCA 90 bp | AAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGAGTCGTGCCAGTCAATaGCAATCCAGACACTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KFTNQIYCQRPVFKISFLSRASQ*QSRHWW Trigger: CCACCAGTGTCTGGATTGGCATTGACTGGCACGACT...CAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGACAGTTCCTCTCCAGTaGCTTCCTGGTCTCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KFTNQIYCQRPVFKISFLTVPLQ*LPGLLC Trigger: GCACAAGAGACCAGGAAGCCACTGGAGAGGAACTGT...CAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR TCA 90 bp | AGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGATCAGGAACTTGGTTaGAGTAACCCCCAAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSQTRFIVSGLFSKSLSWDQELG*SNPQGR Trigger: TCTTCCTTGGGGGTTACTTCAACCAAGTTCCTGATC...CCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR GCA 90 bp | TTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGCATAGACTAGAACATTaGTGTCGTAGGCCACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FTNQIYCQRPVFKISFLGHRLEH*CRRPLQ Trigger: TTGGAGTGGCCTACGACAGCAATGTTCTAGTCTATG...CCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR GCA 90 bp | AGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGCTTCCTGGTCTCTTGTaGTCTCAGCCACAAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSQTRFIVSGLFSKSLSWLPGLL*SQPQSS Trigger: TGAACTTTGTGGCTGAGAGCACAAGAGACCAGGAAG...CCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR TCA 90 bp | AAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGATCAGGAACTTGGTTaGAGTAACCCCCAAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KFTNQIYCQRPVFKISFLDQELG*SNPQGR Trigger: TCTTCCTTGGGGGTTACTTCAACCAAGTTCCTGATC...CAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR GCA 90 bp | AAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGCTTCCTGGTCTCTTGTaGTCTCAGCCACAAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KFTNQIYCQRPVFKISFLLPGLL*SQPQSS Trigger: TGAACTTTGTGGCTGAGAGCACAAGAGACCAGGAAG...CAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR GCA 90 bp | AAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGCATAGACTAGAACATTaGTGTCGTAGGCCACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KFTNQIYCQRPVFKISFLHRLEH*CRRPLQ Trigger: TTGGAGTGGCCTACGACAGCAATGTTCTAGTCTATG...CAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGTGCCAATCCAGACACTaGTGGTCAGAGTTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KFTNQIYCQRPVFKISFLCQSRH*WSEFLL Trigger: AAGAAGAAACTCTGACCACCAGTGTCTGGATTGGCA...CAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CCA 90 bp | CAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTTGCCAATCCAGACACTaGTGGTCAGAGTTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVHKPDLLSAACFQNLFLCQSRH*WSEFLL Trigger: AAGAAGAAACTCTGACCACCAGTGTCTGGATTGGCA...AAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS TCA 90 bp | CTCCGCTCTGAGCAGAATGCCCACAGACGAGGCACGCCTCGCTGGTaGGGCAGTTCGGGGATCCTCTGGGGGTGGGCTCGAGCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRSEQNAHRRGTPRW*GSSGILWGWARAQE Trigger: CTCCTGGGCTCGAGCCCACCCCCAGAGGATCCCCGAACTGCCTCACCAGCGAGGCGTGCCTCGTCTGTGGGCATTCTGCTCAGAGCGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS GCA 90 bp | GCGGATTTCTGGGGCTGCAGCACCCAGGTTCTGGCAGAGGGCTGCTaGGGTCCAAGTTCCGTGCCGATGCCTCTGACCCTCAAACACGAG | + |
|
Preference number: 5 (lower is better) Translates to: ADFWGCSTQVLAEGC*GPSSVPMPLTLKHE Trigger: CTCGTGTTTGAGGGTCAGAGGCATCGGCACGGAACTTGGACCGCAGCAGCCCTCTGCCAGAACCTGGGTGCTGCAGCCCCAGAAATCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014753.9 |
||
| CDS GCA 90 bp | GCAGCGGATTTCTGGGGCTGCAGCACCCAGGTTCTGGCAGAGGGCTaGTGCGGTCCAAGTTCCGTGCCGATGCCTCTGACCCTCAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: AADFWGCSTQVLAEG*CGPSSVPMPLTLKH Trigger: GTGTTTGAGGGTCAGAGGCATCGGCACGGAACTTGGACCGCAGCAGCCCTCTGCCAGAACCTGGGTGCTGCAGCCCCAGAAATCCGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014753.9 |
||
| CDS GCA 90 bp | GCAGCGGATTTCTGGGGCTGCAGCACCCAGGTTCTGGCAGAGGGCTaGGGTCCAAGTTCCGTGCCGATGCCTCTGACCCTCAAACACGAG | + |
|
Preference number: 5 (lower is better) Translates to: AADFWGCSTQVLAEG*GPSSVPMPLTLKHE Trigger: CTCGTGTTTGAGGGTCAGAGGCATCGGCACGGAACTTGGACCGCAGCCCTCTGCCAGAACCTGGGTGCTGCAGCCCCAGAAATCCGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102556.10 |
||
| CDS CCA 90 bp | GCTCTCAGCCACAAAGTTCACAGCATCCACACAGCAGCGGATTTCTaGGGCTGCAGCACCCAGGTTCTGGCAGAGGGCTGCTGCGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALSHKVHSIHTAADF*GCSTQVLAEGCCGP Trigger: TGGACCGCAGCAGCCCTCTGCCAGAACCTGGGTGCTGCAGCCCCAGAAATCCGCTGCTGTGTGGATGCTGTGAACTTTGTGGCTGAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014753.9 |
||
| CDS GCA 90 bp | AGCCACAAAGTTCACAGCATCCACACAGCAGCGGATTTCTGGGGCTaGAGCACCCAGGTTCTGGCAGAGGGCTGCTGCGGTCCAAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHKVHSIHTAADFWG*STQVLAEGCCGPSS Trigger: GGAACTTGGACCGCAGCAGCCCTCTGCCAGAACCTGGGTGCTGCAGCCCCAGAAATCCGCTGCTGTGTGGATGCTGTGAACTTTGTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014753.9 |
||
| CDS GCA 90 bp | AGCCACAAAGTTCACAGCATCCACACAGCAGCGGATTTCTGGGGCTaGAGCACCCAGGTTCTGGCAGAGGGCTGCGGTCCAAGTTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SHKVHSIHTAADFWG*STQVLAEGCGPSSV Trigger: CACGGAACTTGGACCGCAGCCCTCTGCCAGAACCTGGGTGCTGCAGCCCCAGAAATCCGCTGCTGTGTGGATGCTGTGAACTTTGTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102556.10 |
||
| CDS CCA 90 bp | GCTCTCAGCCACAAAGTTCACAGCATCCACACAGCAGCGGATTTCTaGGGCTGCAGCACCCAGGTTCTGGCAGAGGGCTGCGGTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALSHKVHSIHTAADF*GCSTQVLAEGCGPS Trigger: ACTTGGACCGCAGCCCTCTGCCAGAACCTGGGTGCTGCAGCCCCAGAAATCCGCTGCTGTGTGGATGCTGTGAACTTTGTGGCTGAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102556.10 |
||
| CDS TCA 90 bp | TTCTGGCAGAGGGCTGCTGCGGTCCAAGTTCCGTGCCGATGCCTCTaGCCCTCAAACACGAGTTCGCTCCGCGGCTTTTTCAAGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FWQRAAAVQVPCRCL*PSNTSSLRGFFKMS Trigger: GCTCATCTTGAAAAAGCCGCGGAGCGAACTCGTGTTTGAGGGTCAGAGGCATCGGCACGGAACTTGGACCGCAGCAGCCCTCTGCCAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014753.9 |
||
| CDS TCA 90 bp | AGGTTCTGGCAGAGGGCTGCGGTCCAAGTTCCGTGCCGATGCCTCTaGCCCTCAAACACGAGTTCGCTCCGCGGCTTTTTCAAGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFWQRAAVQVPCRCL*PSNTSSLRGFFKMS Trigger: GCTCATCTTGAAAAAGCCGCGGAGCGAACTCGTGTTTGAGGGTCAGAGGCATCGGCACGGAACTTGGACCGCAGCCCTCTGCCAGAACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102556.10 |
||
| CDS CCA 90 bp | CCAGGGCCTTCCCCATACGCACCCAGTCGGACAGTTCCTCTCCAGTaGCTTCCTGGTCTCTTGTGCTCTCAGCCACAAAGTTCACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGPSPYAPSRTVPLQ*LPGLLCSQPQSSQH Trigger: ATGCTGTGAACTTTGTGGCTGAGAGCACAAGAGACCAGGAAGCCACTGGAGAGGAACTGTCCGACTGGGTGCGTATGGGGAAGGCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS GCA 90 bp | GCACCCAGTCGGACAGTTCCTCTCCAGTGGCTTCCTGGTCTCTTGTaGTCTCAGCCACAAAGTTCACAGCATCCACACAGCAGCGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: APSRTVPLQWLPGLL*SQPQSSQHPHSSGF Trigger: AAATCCGCTGCTGTGTGGATGCTGTGAACTTTGTGGCTGAGAGCACAAGAGACCAGGAAGCCACTGGAGAGGAACTGTCCGACTGGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS TCA 90 bp | GGACCCGGAGGATTCCTACACCTGCAAAATCGTCCTTGCTGTAGTTaGGCCGATAGTCGTGCCAGTCAATGCCAATCCAGACACTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGGFLHLQNRPCCS*ADSRASQCQSRHWW Trigger: CCACCAGTGTCTGGATTGGCATTGACTGGCACGACTATCGGCTCAACTACAGCAAGGACGATTTTGCAGGTGTAGGAATCCTCCGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS TCA 90 bp | GGCAGCAGCTCTAATAAAATCTGGCGCAGCCGAGGGGATGTAGCATaGGTCGTTGGCGTCCTCAAAGATACGTTGAGCACGATGACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSSSNKIWRSRGDVA*VVGVLKDTLSTMTQ Trigger: TTGCGTCATCGTGCTCAACGTATCTTTGAGGACGCCAACGACTCATGCTACATCCCCTCGGCTGCGCCAGATTTTATTAGAGCTGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS GCA 90 bp | CCCAAGGAAGATGAGAGTAGAACCAACGCTGAAGAGCACCAAAGCTaGCCAAAAACAGACATTGTCCAGGGCCTTCCCCATACGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PKEDESRTNAEEHQS*PKTDIVQGLPHTHP Trigger: TGGGTGCGTATGGGGAAGGCCCTGGACAATGTCTGTTTTTGGGCAGCTTTGGTGCTCTTCAGCGTTGGTTCTACTCTCATCTTCCTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS GCA 90 bp | GCCTGGGCAGTAGTCTATGGCCCATTCTCCATTCTCGGTAAAAGCTaGCGTGTCAATGTCAATCTTGTTGATGGTATTGCCGTCGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: AWAVVYGPFSILGKS*RVNVNLVDGIAVVI Trigger: GATGACGACGGCAATACCATCAACAAGATTGACATTGACACGGCAGCTTTTACCGAGAATGGAGAATGGGCCATAGACTACTGCCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS CCA 90 bp | GGTGATGGTGACAGTGTCCTCAGGTCTCCTAACTGGCCGGCATTCTaGATCATAATTGTCGAAGAGATGGTGATACAGGCTAAGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GDGDSVLRSPNWPAF*IIIVEEMVIQAKLF Trigger: GAAGAGCTTAGCCTGTATCACCATCTCTTCGACAATTATGATCCAGAATGCCGGCCAGTTAGGAGACCTGAGGACACTGTCACCATCACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS GCA 90 bp | CTGGGGGCAACCAGCTCACATAGCCTCCCTCATAGACTAGAACATTaGTGTCGTAGGCCACTCCAAACTGCCCATCAATATTGTTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LGATSSHSLPHRLEH*CRRPLQTAHQYCFL Trigger: TAGAAAACAATATTGATGGGCAGTTTGGAGTGGCCTACGACAGCAATGTTCTAGTCTATGAGGGAGGCTATGTGAGCTGGTTGCCCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | TCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGGTGGCTTCCTGGTCTCTaGTGCTCTCAGCCACAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQTRFIVSGLFSKSLSWGWLPGL*CSQPQS Trigger: ACTTTGTGGCTGAGAGCACAAGAGACCAGGAAGCCA...CCCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | TCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGGGCCCAAAAACAGACATaGTCCAGGGCCTTCCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: SQTRFIVSGLFSKSLSWGAQKQT*SRAFPI Trigger: TATGGGGAAGGCCCTGGACAATGTCTGTTTTTGGGC...CCCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | TCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGGATCTTGTTGATGGTATaGCCGTCGTCATCCACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SQTRFIVSGLFSKSLSWGILLMV*PSSSTA Trigger: TGCCGTGGATGACGACGGCAATACCATCAACAAGAT...CCCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | GTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGTGGGCTAGCAGGACGTaGATAGAGACCGTGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: VHKPDLLSAACFQNLFLGWASRT*IETVHF Trigger: GAAATGCACGGTCTCTATCAACGTCCTGCTAGCCCA...CCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | TTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGTTCAGTGAGATGAGGTaGGTTAGGGTGACCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FTNQIYCQRPVFKISFLGFSEMR*VRVTLR Trigger: CCTCAAGGTCACCCTAACCAACCTCATCTCACTGAA...CCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | GCAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGCTAGCAGGACGTaGATAGAGACCGTGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASSQTRFIVSGLFSKSLSWASRT*IETVHF Trigger: GAAATGCACGGTCTCTATCAACGTCCTGCTAGCCCA...AGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | GCAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTGCCCAAAAACAGACATaGTCCAGGGCCTTCCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: ASSQTRFIVSGLFSKSLSAQKQT*SRAFPI Trigger: TATGGGGAAGGCCCTGGACAATGTCTGTTTTTGGGC...AGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | TTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGAGGGAGATCAGGAACTaGGTTGAAGTAACCCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTNQIYCQRPVFKISFLGREIRN*VEVTPK Trigger: CTTGGGGGTTACTTCAACCAAGTTCCTGATCTCCCT...CCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | GTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGAGGGAGATCAGGAACTaGGTTGAAGTAACCCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VHKPDLLSAACFQNLFLGREIRN*VEVTPK Trigger: CTTGGGGGTTACTTCAACCAAGTTCCTGATCTCCCT...CCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | AGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGATCTTGTTGATGGTATaGCCGTCGTCATCCACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSQTRFIVSGLFSKSLSWILLMV*PSSSTA Trigger: TGCCGTGGATGACGACGGCAATACCATCAACAAGAT...CCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | TCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGGGTGTCAATGTCAATCTaGTTGATGGTATTGCCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SQTRFIVSGLFSKSLSWGVSMSI*LMVLPS Trigger: CGACGGCAATACCATCAACAAGATTGACATTGACAC...CCCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | TTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGGTCCTCAAAGATACGTaGAGCACGATGACGCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: FTNQIYCQRPVFKISFLGVLKDT*STMTQF Trigger: GAATTGCGTCATCGTGCTCAACGTATCTTTGAGGAC...CCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | CAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTTGGCTTCCTGGTCTCTaGTGCTCTCAGCCACAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QVHKPDLLSAACFQNLFLWLPGL*CSQPQS Trigger: ACTTTGTGGCTGAGAGCACAAGAGACCAGGAAGCCA...AAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | AAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGTTCAGTGAGATGAGGTaGGTTAGGGTGACCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KFTNQIYCQRPVFKISFLFSEMR*VRVTLR Trigger: CCTCAAGGTCACCCTAACCAACCTCATCTCACTGAA...CAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | TCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGGTCAATGTCAATCTTGTaGATGGTATTGCCGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQTRFIVSGLFSKSLSWGSMSIL*MVLPSS Trigger: TGACGACGGCAATACCATCAACAAGATTGACATTGA...CCCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | TTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGGGGGTGTCAATGTCAATCTaGTTGATGGTATTGCCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FTNQIYCQRPVFKISFLGVSMSI*LMVLPS Trigger: CGACGGCAATACCATCAACAAGATTGACATTGACAC...CCCCAAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS-3UTR CAA 90 bp | CAAGTTCACAAACCAGATTTATTGTCAGCGGCCTGTTTTCAAAATCTCTTTCTTGTCCTCAAAGATACGTaGAGCACGATGACGCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: QVHKPDLLSAACFQNLFLVLKDT*STMTQF Trigger: GAATTGCGTCATCGTGCTCAACGTATCTTTGAGGAC...AAGAAAGAGATTTTGAAAACAGGCCGCTGACAATAAATCTGGTTTGTGAACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS GCA 72 bp | TGGGGCTGCAGCACCCAGGTTCTGGCAGAGGGCTGCTaGGGTCCAAGTTCCGTGCCGATGCCTCTGACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WGCSTQVLAEGC*GPSSVPMPLTL Trigger: GAGGGTCAGAGGCATCGGCACGGAACTTGGACCGCAGCAGCCCTCTGCCAGAACCTGGGTGCTGCAGCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014753.9 |
||
| CDS GCA 72 bp | TTCTGGGGCTGCAGCACCCAGGTTCTGGCAGAGGGCTaGTGCGGTCCAAGTTCCGTGCCGATGCCTCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: FWGCSTQVLAEG*CGPSSVPMPLT Trigger: GGTCAGAGGCATCGGCACGGAACTTGGACCGCAGCAGCCCTCTGCCAGAACCTGGGTGCTGCAGCCCCAGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014753.9 |
||
| CDS CCA 72 bp | CAGCAGCGGATTTCTGGGGCTGCAGCACCCAGGTTCTaGCAGAGGGCTGCTGCGGTCCAAGTTCCGTGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: QQRISGAAAPRF*QRAAAVQVPCR Trigger: TCGGCACGGAACTTGGACCGCAGCAGCCCTCTGCCAGAACCTGGGTGCTGCAGCCCCAGAAATCCGCTGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014753.9 |
||
| CDS CCA 72 bp | CAGCAGCGGATTTCTGGGGCTGCAGCACCCAGGTTCTaGCAGAGGGCTGCGGTCCAAGTTCCGTGCCGATGC | + |
|
Preference number: 6 (lower is better) Translates to: QQRISGAAAPRF*QRAAVQVPCRC Trigger: GCATCGGCACGGAACTTGGACCGCAGCCCTCTGCCAGAACCTGGGTGCTGCAGCCCCAGAAATCCGCTGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102556.10 |
||
| CDS CCA 72 bp | GGTGACCTCCACTGCGCAGGTGCTGCGGTAGATGGCTaGGGGCAACCAGCTCACATAGCCTCCCTCATAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GDLHCAGAAVDG*GQPAHIASLID Trigger: GTCTATGAGGGAGGCTATGTGAGCTGGTTGCCCCCAGCCATCTACCGCAGCACCTGCGCAGTGGAGGTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS TCA 72 bp | AGGGCTGCTGCGGTCCAAGTTCCGTGCCGATGCCTCTaGCCCTCAAACACGAGTTCGCTCCGCGGCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RAAAVQVPCRCL*PSNTSSLRGFF Trigger: GAAAAAGCCGCGGAGCGAACTCGTGTTTGAGGGTCAGAGGCATCGGCACGGAACTTGGACCGCAGCAGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014753.9 |
||
| CDS TCA 72 bp | CAGAGGGCTGCGGTCCAAGTTCCGTGCCGATGCCTCTaGCCCTCAAACACGAGTTCGCTCCGCGGCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: QRAAVQVPCRCL*PSNTSSLRGFF Trigger: GAAAAAGCCGCGGAGCGAACTCGTGTTTGAGGGTCAGAGGCATCGGCACGGAACTTGGACCGCAGCCCTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102556.10 |
||
| CDS CCA 72 bp | CACAAAGTTCACAGCATCCACACAGCAGCGGATTTCTaGGGCTGCAGCACCCAGGTTCTGGCAGAGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HKVHSIHTAADF*GCSTQVLAEGC Trigger: GCAGCCCTCTGCCAGAACCTGGGTGCTGCAGCCCCAGAAATCCGCTGCTGTGTGGATGCTGTGAACTTTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS CAA 72 bp | ACGCTGAAGAGCACCAAAGCTGCCCAAAAACAGACATaGTCCAGGGCCTTCCCCATACGCACCCAGTCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TLKSTKAAQKQT*SRAFPIRTQSD Trigger: GTCCGACTGGGTGCGTATGGGGAAGGCCCTGGACAATGTCTGTTTTTGGGCAGCTTTGGTGCTCTTCAGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS CCA 72 bp | AATCTGGCGCAGCCGAGGGGATGTAGCATGAGTCGTTaGCGTCCTCAAAGATACGTTGAGCACGATGACGCA | + |
|
Preference number: 6 (lower is better) Translates to: NLAQPRGCSMSR*RPQRYVEHDDA Trigger: TGCGTCATCGTGCTCAACGTATCTTTGAGGACGCCAACGACTCATGCTACATCCCCTCGGCTGCGCCAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS CAA 90 bp | GTAGAACCAACGCTGAAGAGCACCAAAGCTGCCCAAAAACAGACATaGTCCAGGGCCTTCCCCATACGCACCCAGTCGGACAGTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VEPTLKSTKAAQKQT*SRAFPIRTQSDSSS Trigger: AGAGGAACTGTCCGACTGGGTGCGTATGGGGAAGGCCCTGGACAATGTCTGTTTTTGGGCAGCTTTGGTGCTCTTCAGCGTTGGTTCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS TCA 72 bp | TCTAATAAAATCTGGCGCAGCCGAGGGGATGTAGCATaGGTCGTTGGCGTCCTCAAAGATACGTTGAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: SNKIWRSRGDVA*VVGVLKDTLST Trigger: CGTGCTCAACGTATCTTTGAGGACGCCAACGACTCATGCTACATCCCCTCGGCTGCGCCAGATTTTATTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS GCA 72 bp | GATGAGAGTAGAACCAACGCTGAAGAGCACCAAAGCTaGCCAAAAACAGACATTGTCCAGGGCCTTCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: DESRTNAEEHQS*PKTDIVQGLPH Trigger: ATGGGGAAGGCCCTGGACAATGTCTGTTTTTGGGCAGCTTTGGTGCTCTTCAGCGTTGGTTCTACTCTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS CCA 72 bp | GAGGGTGATGGTGACAGTGTCCTCAGGTCTCCTAACTaGCCGGCATTCTGGATCATAATTGTCGAAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: EGDGDSVLRSPN*PAFWIIIVEEM Trigger: CATCTCTTCGACAATTATGATCCAGAATGCCGGCCAGTTAGGAGACCTGAGGACACTGTCACCATCACCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS TCA 72 bp | GGATTCCTACACCTGCAAAATCGTCCTTGCTGTAGTTaGGCCGATAGTCGTGCCAGTCAATGCCAATCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GFLHLQNRPCCS*ADSRASQCQSR Trigger: TCTGGATTGGCATTGACTGGCACGACTATCGGCTCAACTACAGCAAGGACGATTTTGCAGGTGTAGGAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS CCA 72 bp | GACAGTGTCCTCAGGTCTCCTAACTGGCCGGCATTCTaGATCATAATTGTCGAAGAGATGGTGATACAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DSVLRSPNWPAF*IIIVEEMVIQA Trigger: AGCCTGTATCACCATCTCTTCGACAATTATGATCCAGAATGCCGGCCAGTTAGGAGACCTGAGGACACTGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS CCA 72 bp | AACCACCATGACGAATATAAGATACCTGCCCAGCAGTaGCACGCTCAGAGAAGTCTCTGGAATTTTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NHHDEYKIPAQQ*HAQRSLWNFLG Trigger: GCCCAGAAAATTCCAGAGACTTCTCTGAGCGTGCCACTGCTGGGCAGGTATCTTATATTCGTCATGGTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS CAA 72 bp | TGGTTGGATGCACGGTGGGTAAGGGAGATCAGGAACTaGGTTGAAGTAACCCCCAAGGAAGATGAGAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: WLDARWVREIRN*VEVTPKEDESR Trigger: TCTACTCTCATCTTCCTTGGGGGTTACTTCAACCAAGTTCCTGATCTCCCTTACCCACCGTGCATCCAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS CAA 90 bp | TTCTCGGTAAAAGCTGCCGTGTCAATGTCAATCTTGTTGATGGTATaGCCGTCGTCATCCACGGCAAAGATGAACTCCACCTCCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FSVKAAVSMSILLMV*PSSSTAKMNSTSSA Trigger: TGCTGAGGAGGTGGAGTTCATCTTTGCCGTGGATGACGACGGCAATACCATCAACAAGATTGACATTGACACGGCAGCTTTTACCGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS GCA 72 bp | ACCAGCTCACATAGCCTCCCTCATAGACTAGAACATTaGTGTCGTAGGCCACTCCAAACTGCCCATCAATAT | + |
|
Preference number: 6 (lower is better) Translates to: TSSHSLPHRLEH*CRRPLQTAHQY Trigger: ATATTGATGGGCAGTTTGGAGTGGCCTACGACAGCAATGTTCTAGTCTATGAGGGAGGCTATGTGAGCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS CAA 72 bp | AAAGCTGCCGTGTCAATGTCAATCTTGTTGATGGTATaGCCGTCGTCATCCACGGCAAAGATGAACTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: KAAVSMSILLMV*PSSSTAKMNST Trigger: GGTGGAGTTCATCTTTGCCGTGGATGACGACGGCAATACCATCAACAAGATTGACATTGACACGGCAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS CAA 90 bp | CATTCTCCATTCTCGGTAAAAGCTGCCGTGTCAATGTCAATCTTGTaGATGGTATTGCCGTCGTCATCCACGGCAAAGATGAACTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: HSPFSVKAAVSMSIL*MVLPSSSTAKMNST Trigger: GGTGGAGTTCATCTTTGCCGTGGATGACGACGGCAATACCATCAACAAGATTGACATTGACACGGCAGCTTTTACCGAGAATGGAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||
| CDS GCA 72 bp | GTAGTCTATGGCCCATTCTCCATTCTCGGTAAAAGCTaGCGTGTCAATGTCAATCTTGTTGATGGTATTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VVYGPFSILGKS*RVNVNLVDGIA Trigger: GGCAATACCATCAACAAGATTGACATTGACACGGCAGCTTTTACCGAGAATGGAGAATGGGCCATAGACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014753.9 ENSMUST00000102556.10 |
||