Pregenerated sensors for CHRND (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026251Ensembl transcript IDs: ENSMUST00000073252.9, ENSMUST00000186373.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGCCAGTCCCAAGGTCACCTCTCTGGCCCCCTGAGCAAGGCCCCTaGTTCTCCTCACAACCCTGGAGCCTCCCTCTCCACCACGTCCAC | + |
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Preference number: 1 (lower is better) Translates to: KPVPRSPLWPPEQGP*FSSQPWSLPLHHVH Trigger: GTGGACGTGGTGGAGAGGGAGGCTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCCAGAGAGGTGACCTTGGGACTGGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR TCA 90 bp | GACTGTTCCCAGGAAGCCAGTCCCAAGGTCACCTCTCTGGCCCCCTaGGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAGCCTCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: DCSQEASPKVTSLAP*ARPLLLLTTLEPPS Trigger: AGAGGGAGGCTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCCAGAGAGGTGACCTTGGGACTGGCTTCCTGGGAACAGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR CCA 90 bp | TCTCACAGGACTGTTCCCAGGAAGCCAGTCCCAAGGTCACCTCTCTaGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: SHRTVPRKPVPRSPL*PPEQGPCFSSQPWS Trigger: GCTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCCAGAGAGGTGACCTTGGGACTGGCTTCCTGGGAACAGTCCTGTGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR GCA 90 bp | GCCACACAGCACCCGCTAGGCACAAGCTCAAGGGCAGGAACTACGTaGCGTTCTCAGACTGCTGTCTGCCTGGCTGTCTACTCATGCCTG | + |
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Preference number: 1 (lower is better) Translates to: ATQHPLGTSSRAGTT*RSQTAVCLAVYSCL Trigger: CAGGCATGAGTAGACAGCCAGGCAGACAGCAGTCTGAGAACGGCACGTAGTTCCTGCCCTTGAGCTTGTGCCTAGCGGGTGCTGTGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR CCA 90 bp | TCTGACCTGCTCTGGAAGACAGTCAGGCGGAGGAGCAGCTCAGGTTaGGGGATCTCTCACAGGACTGTTCCCAGGAAGCCAGTCCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: SDLLWKTVRRRSSSG*GISHRTVPRKPVPR Trigger: CCTTGGGACTGGCTTCCTGGGAACAGTCCTGTGAGAGATCCCCCAACCTGAGCTGCTCCTCCGCCTGACTGTCTTCCAGAGCAGGTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGCAACCCAGGCTGGTCTCATCTGTTTaGTCCGGCTTCTTAAGTGCTGGGGTTATAGGTGTGCGCCATTAC | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVQPRLVSSV*SGFLSAGVIGVRHY Trigger: GTAATGGCGCACACCTATAACCCCAGCACTTAAGAAGCCGGAGCAAACAGATGAGACCAGCCTGGGTTGCACACACACACACACACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR CCA 90 bp | CCAGGTACAGAGAGCAGGGACTGTCTCAAGACACGATTTGAGAGGTaGGCTTTGCAGGCTACACTAAGACCTAGTCTCCTTGCTCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: PGTESRDCLKTRFER*ALQATLRPSLLAPV Trigger: CACAGGAGCAAGGAGACTAGGTCTTAGTGTAGCCTGCAAAGCCCACCTCTCAAATCGTGTCTTGAGACAGTCCCTGCTCTCTGTACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR GCA 90 bp | CTCCGGCTTCTTAAGTGCTGGGGTTATAGGTGTGCGCCATTACTCTaGAGGAGCAGCCATCTCAGAAGCTGTTCTTTGAAGGAGCATAGC | + |
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Preference number: 1 (lower is better) Translates to: LRLLKCWGYRCAPLL*RSSHLRSCSLKEHS Trigger: GCTATGCTCCTTCAAAGAACAGCTTCTGAGATGGCTGCTCCTGCAGAGTAATGGCGCACACCTATAACCCCAGCACTTAAGAAGCCGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR CCA 90 bp | AAAGACCCCCTTTCTAGTCTACCTGCCTGTGTGGCTCTTGATAGGTaGACCCTTTTACAGAGTCTCAGCAGTGTGGCTGACTTCCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: KDPLSSLPACVALDR*TLLQSLSSVADFQR Trigger: TCTTTGGAAGTCAGCCACACTGCTGAGACTCTGTAAAAGGGTCCACCTATCAAGAGCCACACAGGCAGGTAGACTAGAAAGGGGGTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAGCCTCCCTCTCCAGACTGCTGTCTGCCTaGCTGTCTACTCATGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: GPLSKAPASPHNPGASLSRLLSA*LSTHAC Trigger: GCAGGCATGAGTAGACAGCCAGGCAGACAGCAGTCT...GGAGAGGGAGGCTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGTCACCTCTCTGGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTCTCAGACTGCTGTCTaGCTGGCTGTCTACTCATGC | + |
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Preference number: 2 (lower is better) Translates to: PRSPLWPPEQGPCFSSQPSQTAV*LAVYSC Trigger: GCATGAGTAGACAGCCAGGCAGACAGCAGTCTGAGA...GGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCCAGAGAGGTGACCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGTGTCATCCTCCCACACCAGTCCCCCGCTTCTCAGAAGGACTCAGACAGTTCTCCTCACAACCCTaGAGCCTCCCTCTCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: AKCHPPTPVPRFSEGLRQFSSQP*SLPLHH Trigger: GTGGTGGAGAGGGAGGCTCCAGGGTTGTGAGGAGAA...CTGTCTGAGTCCTTCTGAGAAGCGGGGGACTGGTGTGGGAGGATGACACTTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGAGAGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTTCTCCTCACAACCCTaGAGCCTCCCTCTCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: RVGEWKGEAAVLCVCVCVFSSQP*SLPLHH Trigger: GTGGTGGAGAGGGAGGCTCCAGGGTTGTGAGGAGAA...CACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACTCTCCCACTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCCTGAACAGCTCTCATCTAGAGGTCCTCCCAGGGTAGAAAGACCCCCTTTCCCTGAGCAAGGCCCCTaGTTCTCCTCACAACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GPEQLSSRGPPRVERPPFPEQGP*FSSQPW Trigger: CCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGG...GAAAGGGGGTCTTTCTACCCTGGGAGGACCTCTAGATGAGAGCTGTTCAGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGTGTCATCCTCCCACACCAGTCCCCCGCTTCTCAGAAGGACTCAGACAGAGACTGCTGTCTGCCTaGCTGTCTACTCATGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: AKCHPPTPVPRFSEGLRQRLLSA*LSTHAC Trigger: GCAGGCATGAGTAGACAGCCAGGCAGACAGCAGTCT...CTGTCTGAGTCCTTCTGAGAAGCGGGGGACTGGTGTGGGAGGATGACACTTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGAGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTGTGGGAAGGGACTCAATGTaGGGGTCTCTTAGAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: WESGRERPQCCVCVCVCVGRDSM*GSLRGA Trigger: AGCCCCTCTAAGAGACCCCCACATTGAGTCCCTTCC...CACACACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACTCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGAGAGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGGTGTGCAACCCAGGCTaGTCTCATCTGTTTGCTCCG | + |
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Preference number: 2 (lower is better) Translates to: RVGEWKGEAAVLCVCVCVVCNPG*SHLFAP Trigger: CGGAGCAAACAGATGAGACCAGCCTGGGTTGCACAC...CACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACTCTCCCACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR TCA 90 bp | GGTAGAAAGACCCCCTTTCTAGTCTACCTGCCTGTGTGGCTCTTGATAGGTGGATCGGGGGCTGACAGATaGCAACCTGGACAGCCCACC | + |
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Preference number: 2 (lower is better) Translates to: GRKTPFLVYLPVWLLIGGSGADR*QPGQPT Trigger: GGTGGGCTGTCCAGGTTGTCATCTGTCAGCCCCCGA...TCCACCTATCAAGAGCCACACAGGCAGGTAGACTAGAAAGGGGGTCTTTCTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGGGAGAGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTCTCAGACTGCTGTCTaGCTGGCTGTCTACTCATGC | + |
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Preference number: 2 (lower is better) Translates to: RVGEWKGEAAVLCVCVCVSQTAV*LAVYSC Trigger: GCATGAGTAGACAGCCAGGCAGACAGCAGTCTGAGA...CACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACTCTCCCACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCAAGGAAATTGCAAGTTCAGAATTCTGACCTGCTCTGGAAGACAGTCAGGCACCTCTCTGGCCCCCTaGGCAAGGCCCCTGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: RQGNCKFRILTCSGRQSGTSLAP*ARPLLL Trigger: GAGAAGCAGGGGCCTTGCTCAGGGGGCCAGAGAGGT...GCCTGACTGTCTTCCAGAGCAGGTCAGAATTCTGAACTTGCAATTTCCTTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCCATTACTCTaGAGGAGCAGCCATCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SGRERPQCCVCVCVCVCVCAPLL*RSSHLR Trigger: TCTGAGATGGCTGCTCCTGCAGAGTAATGGCGCACA...CACACACACACACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR CAA 90 bp | CCCTTAGCCCATCTCAAGTGTCTCCCTCCTTTATTTAGAAAGGAATaGTTTCCGGAAGGGAGCTCTCCCGACCATGGCCTCTGCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: PLAHLKCLPPLFRKE*FPEGSSPDHGLCPA Trigger: GGCTGGGCAGAGGCCATGGTCGGGAGAGCTCCCTTCCGGAAACAATTCCTTTCTAAATAAAGGAGGGAGACACTTGAGATGGGCTAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCCGCTTCTCAGAAGGACTCAGACAGAACGACCAAGGCATCGGGGGCTGACAGGAAGGCAAGGAAATTaGAAGTTCAGAATTCTGACC | + |
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Preference number: 2 (lower is better) Translates to: PPLLRRTQTERPRHRGLTGRQGN*KFRILT Trigger: GGTCAGAATTCTGAACTTGCAATTTCCTTGCCTTCC...TGTCAGCCCCCGATGCCTTGGTCGTTCTGTCTGAGTCCTTCTGAGAAGCGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGCAACCCAGGCTGGTCTCATCTGTTaGCTCCGGCTTCTTAAGTGCTGGGGTTATAGGTGTGCGCCATTA | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCATQAGLIC*LRLLKCWGYRCAPL Trigger: TAATGGCGCACACCTATAACCCCAGCACTTAAGAAGCCGGAGCAAACAGATGAGACCAGCCTGGGTTGCACACACACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR TCA 90 bp | GGTAGAAAGACCCCCTTTCTAGTCTACCTGCCTGTGTGGCTCTTGATAGGTGGATCTCAAGACACGATTTaGGAGGTGGGCTTTGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GRKTPFLVYLPVWLLIGGSQDTI*EVGFAG Trigger: GCCTGCAAAGCCCACCTCTCAAATCGTGTCTTGAGA...TCCACCTATCAAGAGCCACACAGGCAGGTAGACTAGAAAGGGGGTCTTTCTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CCA 90 bp | GGTAGAAAGACCCCCTTTCTAGTCTACCTGCCTGTGTGGCTCTTGATAGGTGGAGTAAACCTCCTTCCCTaGGGAATGGAGAGTAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: GRKTPFLVYLPVWLLIGGVNLLP*GMESSH Trigger: GTGACTACTCTCCATTCCCCAGGGAAGGAGGTTTAC...TCCACCTATCAAGAGCCACACAGGCAGGTAGACTAGAAAGGGGGTCTTTCTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR CAA 90 bp | ACAGAGAGCAGGGACTGTCTCAAGACACGATTTGAGAGGTGGGCTTaGCAGGCTACACTAAGACCTAGTCTCCTTGCTCCTGTGATTGAT | + |
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Preference number: 2 (lower is better) Translates to: TESRDCLKTRFERWA*QATLRPSLLAPVID Trigger: ATCAATCACAGGAGCAAGGAGACTAGGTCTTAGTGTAGCCTGCAAAGCCCACCTCTCAAATCGTGTCTTGAGACAGTCCCTGCTCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTAAGTGCTGGGGTTATAGGTGTGCGCCATTACTCTGCAGGAGCAGCCATCGTCTCCTTGCTCCTGTaGTTGATAGGACTCAGGATA | + |
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Preference number: 2 (lower is better) Translates to: FLSAGVIGVRHYSAGAAIVSLLL*LIGLRI Trigger: TATCCTGAGTCCTATCAATCACAGGAGCAAGGAGAC...GATGGCTGCTCCTGCAGAGTAATGGCGCACACCTATAACCCCAGCACTTAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR TCA 72 bp | CAGGAAGCCAGTCCCAAGGTCACCTCTCTGGCCCCCTaGGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: QEASPKVTSLAP*ARPLLLLTTLE Trigger: CTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCCAGAGAGGTGACCTTGGGACTGGCTTCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR CCA 72 bp | ACTGTTCCCAGGAAGCCAGTCCCAAGGTCACCTCTCTaGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAA | + |
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Preference number: 3 (lower is better) Translates to: TVPRKPVPRSPL*PPEQGPCFSSQ Trigger: TTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCCAGAGAGGTGACCTTGGGACTGGCTTCCTGGGAACAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR CCA 72 bp | CCTGGACAGCCCACCATCCCAGTAAACCTCCTTCCCTaGGGAATGGAGAGTAGTCACCCTCTCTGGGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: PGQPTIPVNLLP*GMESSHPLWAP Trigger: TGGGGCCCAGAGAGGGTGACTACTCTCCATTCCCCAGGGAAGGAGGTTTACTGGGATGGTGGGCTGTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGTGGGAGAGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGGAGGAGCAGCTCAGGTaGGGGGATCTCTCACAGGAC | + |
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Preference number: 3 (lower is better) Translates to: RVGEWKGEAAVLCVCVCVEEQLR*GDLSQD Trigger: GTCCTGTGAGAGATCCCCCAACCTGAGCTGCTCCTC...CACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACTCTCCCACTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGAGAGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTGTGCTAGGCAACCCTGGTTaGGAGAGCCTGGGGCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: WESGRERPQCCVCVCVCVLGNPG*ESLGLG Trigger: TCCTAGCCCCAGGCTCTCCAAACCAGGGTTGCCTAG...CACACACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACTCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR GCA 72 bp | CACCCGCTAGGCACAAGCTCAAGGGCAGGAACTACGTaGCGTTCTCAGACTGCTGTCTGCCTGGCTGTCTAC | + |
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Preference number: 3 (lower is better) Translates to: HPLGTSSRAGTT*RSQTAVCLAVY Trigger: GTAGACAGCCAGGCAGACAGCAGTCTGAGAACGGCACGTAGTTCCTGCCCTTGAGCTTGTGCCTAGCGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGAACCCAGGCTGGTCTCATCTGTTTGCTCCGGCT | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVCVCV*NPGWSHLFAPA Trigger: AGCCGGAGCAAACAGATGAGACCAGCCTGGGTTGCACACACACACACACACACACACACACACACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR TCA 72 bp | GGGAAGGAAGGCAAGGAAATTGCAAGTTCAGAATTCTaGCCTGCTCTGGAAGACAGTCAGGCGGAGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: GKEGKEIASSEF*PALEDSQAEEQ Trigger: CTGCTCCTCCGCCTGACTGTCTTCCAGAGCAGGTCAGAATTCTGAACTTGCAATTTCCTTGCCTTCCTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR GCA 72 bp | GGAAGGCAAGGAAATTGCAAGTTCAGAATTCTGACCTaGTCTGGAAGACAGTCAGGCGGAGGAGCAGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: GRQGNCKFRILT*SGRQSGGGAAQ Trigger: CTGAGCTGCTCCTCCGCCTGACTGTCTTCCAGAGCAGGTCAGAATTCTGAACTTGCAATTTCCTTGCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR CCA 72 bp | GCAAGGAAATTGCAAGTTCAGAATTCTGACCTGCTCTaGAAGACAGTCAGGCGGAGGAGCAGCTCAGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: ARKLQVQNSDLL*KTVRRRSSSGW Trigger: CCAACCTGAGCTGCTCCTCCGCCTGACTGTCTTCCAGAGCAGGTCAGAATTCTGAACTTGCAATTTCCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CAA 90 bp | GGTAGAAAGACCCCCTTTCTAGTCTACCTGCCTGTGTGGCTCTTGATAGGTGGAGTCTCAAGACACGATTaGAGAGGTGGGCTTTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GRKTPFLVYLPVWLLIGGVSRHD*RGGLCR Trigger: CCTGCAAAGCCCACCTCTCAAATCGTGTCTTGAGAC...TCCACCTATCAAGAGCCACACAGGCAGGTAGACTAGAAAGGGGGTCTTTCTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAAGTGTCATCCTCCCACACCAGTCCCCCGCTTCTCAGAAGGACTCAGACAGTTATTTAGAAAGGAATaGTTTCCGGAAGGGAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: AKCHPPTPVPRFSEGLRQLFRKE*FPEGSS Trigger: AGAGCTCCCTTCCGGAAACAATTCCTTTCTAAATAA...CTGTCTGAGTCCTTCTGAGAAGCGGGGGACTGGTGTGGGAGGATGACACTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CAA 90 bp | ACACCAGTCCCCCGCTTCTCAGAAGGACTCAGACAGAACGACCAAGGCATCGGGTTATTTAGAAAGGAATaGTTTCCGGAAGGGAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: TPVPRFSEGLRQNDQGIGLFRKE*FPEGSS Trigger: AGAGCTCCCTTCCGGAAACAATTCCTTTCTAAATAA...CCCGATGCCTTGGTCGTTCTGTCTGAGTCCTTCTGAGAAGCGGGGGACTGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR CCA 72 bp | TTGATAGGTGGACCCTTTTACAGAGTCTCAGCAGTGTaGCTGACTTCCAAAGAGAGTGGGAGAGTGGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: LIGGPFYRVSAV*LTSKESGRVEG Trigger: CCCTTCCACTCTCCCACTCTCTTTGGAAGTCAGCCACACTGCTGAGACTCTGTAAAAGGGTCCACCTATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCTATTGGTTACTCTGAACTGCCAGGTACAGAGAGCAGGGACTGTCTCAAGATTTGAGAGGTGGGCTTaGCAGGCTACACTAAGACCT | + |
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Preference number: 3 (lower is better) Translates to: ILLVTLNCQVQRAGTVSRFERWA*QATLRP Trigger: AGGTCTTAGTGTAGCCTGCAAAGCCCACCTCTCAAA...TCTTGAGACAGTCCCTGCTCTCTGTACCTGGCAGTTCAGAGTAACCAATAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR TCA 72 bp | CATAGCATCATTTCTACCTCATTCTATTGGTTACTCTaGACTGCCAGGTACAGAGAGCAGGGACTGTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: HSIISTSFYWLL*TARYREQGLSQ Trigger: TTGAGACAGTCCCTGCTCTCTGTACCTGGCAGTTCAGAGTAACCAATAGAATGAGGTAGAAATGATGCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGCATCATTTCTACCTCATTCTATTGGTTACTCTGAACTGCCAGGTACAGAGAGGAAGGCAAGGAAATaGCAAGTTCAGAATTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: IASFLPHSIGYSELPGTERKARK*QVQNSD Trigger: GTCAGAATTCTGAACTTGCAATTTCCTTGCCTTCCT...CTCTGTACCTGGCAGTTCAGAGTAACCAATAGAATGAGGTAGAAATGATGCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| 3UTR TCA 72 bp | AGAACACTGGGTGCACATTTAAATTTGAGCTTCAGATaGACGACGGATAAATCTTTATCCCAAGTGTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: RTLGAHLNLSFR*TTDKSLSQVYL Trigger: GAGGTACACTTGGGATAAAGATTTATCCGTCGTTCATCTGAAGCTCAAATTTAAATGTGCACCCAGTGTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAGCCTCCCTCTCCGCTGGGCGGGACATGTaGAGGAGCTTGGGCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPLSKAPASPHNPGASLSAGRDM*RSLGRV Trigger: GACCCTGCCCAAGCTCCTGCACATGTCCCGCCCAGC...GGAGAGGGAGGCTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAGCCTCCCTCTCCTGGGTCTTCCTCTGCTaGGCGGGACATGTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPLSKAPASPHNPGASLSWVFLC*AGHVQE Trigger: CTCCTGCACATGTCCCGCCCAGCAGAGGAAGACCCA...GGAGAGGGAGGCTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGGTCACCTCTCTGGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCCGCCGGGCCAGCCCATaGCGCTCTGATTGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRSPLWPPEQGPCFSSQPRRASP*RSDCFS Trigger: TGAGAAGCAATCAGAGCGGCATGGGCTGGCCCGGCG...GGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCCAGAGAGGTGACCTTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAGCCTCCCTCTCCACAGCACATGGGTGCTaGGCGTCCGGAAGTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GPLSKAPASPHNPGASLSTAHGC*ASGSGC Trigger: ACATCCACTTCCGGACGCCCAGCACCCATGTGCTGT...GGAGAGGGAGGCTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | CCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAGCCTCCCTCTCCACAGCTCCTGTTGGACCTaGTCAGAGCTTGCTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPEQGPCFSSQPWSLPLHSSCWT*SELAGG Trigger: GCCTCCAGCAAGCTCTGAGCAGGTCCAACAGGAGCT...GTGGAGAGGGAGGCTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGGTCACCTCTCTGGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCGGATGGCCATGGAAGTaGCCGGCAGCCTCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRSPLWPPEQGPCFSSQPGWPWK*PAASWR Trigger: TCTCCAAGAGGCTGCCGGCCACTTCCATGGCCATCC...GGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCCAGAGAGGTGACCTTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGAATTGTTTCCGGAAGGGAGCTCTCCCGACCATGGCCTCTGCCCAGCCACGAGAGCCCTGGGGCCTaGGTCTTCCTCTGCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KGIVSGRELSRPWPLPSHESPGA*VFLCWA Trigger: CGCCCAGCAGAGGAAGACCCAGGCCCCAGGGCTCTC...GTGGCTGGGCAGAGGCCATGGTCGGGAGAGCTCCCTTCCGGAAACAATTCCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAGCCTCCCTCTCCACACTGTGCGGGCCACCTaGTTCCAGTTGTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPEQGPCFSSQPWSLPLHTVRAT*FQLSFS Trigger: GGAGAAGGACAACTGGAACCAGGTGGCCCGCACAGT...GTGGAGAGGGAGGCTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | GGTCACCTCTCTGGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTGGACCAGGAGCACTGAGATaGCCACGGAGGTCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHLSGPLSKAPASPHNPGPGALR*PRRSSL Trigger: GAGAGAAGACCTCCGTGGCCATCTCAGTGCTCCTGG...TCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCCAGAGAGGTGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR TCA 90 bp | CCCCCGCTTCTCAGAAGGACTCAGACAGAACGACCAAGGCATCGGGGGCTGACATTGGGCCAGGAGCACTaGGATGGCCACGGAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPLLRRTQTERPRHRGLTLGQEH*DGHGGL Trigger: AAGACCTCCGTGGCCATCTCAGTGCTCCTGGCCCAA...TGTCAGCCCCCGATGCCTTGGTCGTTCTGTCTGAGTCCTTCTGAGAAGCGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCAAGGGCAGGAACTACGTGCCGTTCTCAGACTGCTGTCTGCCTGGCTGTCGCCTGGGTCTTCCTCTaGTGGGCGGGACATGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSRAGTTCRSQTAVCLAVAWVFL*WAGHVQ Trigger: CTGCACATGTCCCGCCCAGCAGAGGAAGACCCAGGC...GACAGCCAGGCAGACAGCAGTCTGAGAACGGCACGTAGTTCCTGCCCTTGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | CCCCCGCTTCTCAGAAGGACTCAGACAGAACGACCAAGGCATCGGGGGCTGACAAGAGACGGTCCACTGTaGGGGCCACCTGGTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPLLRRTQTERPRHRGLTRDGPL*GPPGSS Trigger: ACTGGAACCAGGTGGCCCGCACAGTGGACCGTCTCT...TGTCAGCCCCCGATGCCTTGGTCGTTCTGTCTGAGTCCTTCTGAGAAGCGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAGAGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTGTGCCAAGGGGATGGCCATaGAAGTGGCCGGCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WESGRERPQCCVCVCVCVPRGWP*KWPAAS Trigger: AGAGGCTGCCGGCCACTTCCATGGCCATCCCCTTGG...CACACACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACTCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | GCCAAGTGTCATCCTCCCACACCAGTCCCCCGCTTCTCAGAAGGACTCAGACAGCTGCTCAGAGCTTGCTaGAGGCCTGCGGGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AKCHPPTPVPRFSEGLRQLLRAC*RPAGCG Trigger: ACCACAGCCCGCAGGCCTCCAGCAAGCTCTGAGCAG...CTGTCTGAGTCCTTCTGAGAAGCGGGGGACTGGTGTGGGAGGATGACACTTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR TCA 90 bp | ACACCAGTCCCCCGCTTCTCAGAAGGACTCAGACAGAACGACCAAGGCATCGGGTTGGGCCAGGAGCACTaGGATGGCCACGGAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPVPRFSEGLRQNDQGIGLGQEH*DGHGGL Trigger: AAGACCTCCGTGGCCATCTCAGTGCTCCTGGCCCAA...CCCGATGCCTTGGTCGTTCTGTCTGAGTCCTTCTGAGAAGCGGGGGACTGGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAGCCTCCCTCTCCCCATGCCGCTCTGATTaGTTCTCAAACATGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPLSKAPASPHNPGASLSPCRSD*FSNMRS Trigger: TGACCTCATGTTTGAGAAGCAATCAGAGCGGCATGG...GGAGAGGGAGGCTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCAAGGGCAGGAACTACGTGCCGTTCTCAGACTGCTGTCTGCCTGGCTGTCCAGGCCCCAACTGCCTaGGAGGGCACACACAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSRAGTTCRSQTAVCLAVQAPTA*EGTHNK Trigger: CTTGTTGTGTGTGCCCTCCCAGGCAGTTGGGGCCTG...GACAGCCAGGCAGACAGCAGTCTGAGAACGGCACGTAGTTCCTGCCCTTGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073252.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGAGAGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGAGCTTGGCTGCCCGATaGACTATCTCCCACTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RVGEWKGEAAVLCVCVCVSLAAR*TISHSP Trigger: CGGTGAGTGGGAGATAGTGCATCGGGCAGCCAAGCT...CACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACTCTCCCACTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | GGACAGCCCACCATCCCAGTAAACCTCCTTCCCTGGGGAATGGAGAGTAGTCACCAGACAGCACATGGGTaGTGGGCGTCCGGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQPTIPVNLLPWGMESSHQTAHG*WASGSG Trigger: TCCACTTCCGGACGCCCAGCACCCATGTGCTGTCTG...GTGACTACTCTCCATTCCCCAGGGAAGGAGGTTTACTGGGATGGTGGGCTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGACGGTCCACTGTaGGGGCCACCTGGTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGRERPQCCVCVCVCVCVRDGPL*GPPGSS Trigger: ACTGGAACCAGGTGGCCCGCACAGTGGACCGTCTCT...CACACACACACACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCTGAACAGCTCTCATCTAGAGGTCCTCCCAGGGTAGAAAGACCCCCTTTCCTGCTCAGAGCTTGCTaGAGGCCTGCGGGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPEQLSSRGPPRVERPPFLLRAC*RPAGCG Trigger: ACCACAGCCCGCAGGCCTCCAGCAAGCTCTGAGCAG...GAAAGGGGGTCTTTCTACCCTGGGAGGACCTCTAGATGAGAGCTGTTCAGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGCTTGGCTGCCCGATaGACTATCTCCCACTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SGRERPQCCVCVCVCVCVSLAAR*TISHSP Trigger: CGGTGAGTGGGAGATAGTGCATCGGGCAGCCAAGCT...CACACACACACACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | GGACAGCCCACCATCCCAGTAAACCTCCTTCCCTGGGGAATGGAGAGTAGTCACCCAGGAGCACTGAGATaGCCACGGAGGTCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQPTIPVNLLPWGMESSHPGALR*PRRSSL Trigger: GAGAGAAGACCTCCGTGGCCATCTCAGTGCTCCTGG...GTGACTACTCTCCATTCCCCAGGGAAGGAGGTTTACTGGGATGGTGGGCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR TCA 90 bp | GGTCACCTCTCTGGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAACTGCGGGACTTAAGTaGGAAATACTCCTCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GHLSGPLSKAPASPHNPGTAGLK*EILLCF Trigger: AAAGCAGAGGAGTATTTCTCACTTAAGTCCCGCAGT...TCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCCAGAGAGGTGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | GGTAGAAAGACCCCCTTTCTAGTCTACCTGCCTGTGTGGCTCTTGATAGGTGGAGCCTGGGTCTTCCTCTaGTGGGCGGGACATGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRKTPFLVYLPVWLLIGGAWVFL*WAGHVQ Trigger: CTGCACATGTCCCGCCCAGCAGAGGAAGACCCAGGC...TCCACCTATCAAGAGCCACACAGGCAGGTAGACTAGAAAGGGGGTCTTTCTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGTAGGTAAGGGAAGGAAGGCAAGGAAATTGCAAGTTCAGAATTCTGACGAGAGCCCTGGGGCCTaGGTCTTCCTCTGCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PQVGKGRKARKLQVQNSDESPGA*VFLCWA Trigger: CGCCCAGCAGAGGAAGACCCAGGCCCCAGGGCTCTC...GTCAGAATTCTGAACTTGCAATTTCCTTGCCTTCCTTCCCTTACCTACCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGCCCATGCCGCTCTaGTTGCTTCTCAAACATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGRERPQCCVCVCVCVCVQPMPL*LLLKHE Trigger: CTCATGTTTGAGAAGCAATCAGAGCGGCATGGGCTG...CACACACACACACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | GGTAGAAAGACCCCCTTTCTAGTCTACCTGCCTGTGTGGCTCTTGATAGGTGGACAGACAGCACATGGGTaGTGGGCGTCCGGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRKTPFLVYLPVWLLIGGQTAHG*WASGSG Trigger: TCCACTTCCGGACGCCCAGCACCCATGTGCTGTCTG...TCCACCTATCAAGAGCCACACAGGCAGGTAGACTAGAAAGGGGGTCTTTCTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | CCCCCGCTTCTCAGAAGGACTCAGACAGAACGACCAAGGCATCGGGGGCTGACACCATGCCGCTCTGATTaGTTCTCAAACATGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLLRRTQTERPRHRGLTPCRSD*FSNMRS Trigger: TGACCTCATGTTTGAGAAGCAATCAGAGCGGCATGG...TGTCAGCCCCCGATGCCTTGGTCGTTCTGTCTGAGTCCTTCTGAGAAGCGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGAATTGTTTCCGGAAGGGAGCTCTCCCGACCATGGCCTCTGCCCAGCCACGTTGACGATGAAGTTTaGCCCATCCACAGCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGIVSGRELSRPWPLPSHVDDEV*PIHSWL Trigger: AAGCCAGCTGTGGATGGGGCAAACTTCATCGTCAAC...GTGGCTGGGCAGAGGCCATGGTCGGGAGAGCTCCCTTCCGGAAACAATTCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAGAGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTGTGTGCCCCATCCACAGCTaGCTTCATCTCATTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WESGRERPQCCVCVCVCVCPIHS*LHLIEE Trigger: CTCTTCAATGAGATGAAGCCAGCTGTGGATGGGGCA...CACACACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACTCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR TCA 90 bp | CCCCCGCTTCTCAGAAGGACTCAGACAGAACGACCAAGGCATCGGGGGCTGACAGGCTGTATACTTGAGTaGACTGAATTTGAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLLRRTQTERPRHRGLTGCILE*TEFEGA Trigger: TGCTCCCTCAAATTCAGTTCACTCAAGTATACAGCC...TGTCAGCCCCCGATGCCTTGGTCGTTCTGTCTGAGTCCTTCTGAGAAGCGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGTAGGTAAGGGAAGGAAGGCAAGGAAATTGCAAGTTCAGAATTCTGACCGCCGGGCCAGCCCATaGCGCTCTGATTGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQVGKGRKARKLQVQNSDRRASP*RSDCFS Trigger: TGAGAAGCAATCAGAGCGGCATGGGCTGGCCCGGCG...GTCAGAATTCTGAACTTGCAATTTCCTTGCCTTCCTTCCCTTACCTACCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGCGCCATTACTCTGCAGGAGCAGCCATCTCAGAAGCTGTTCTTTGAAGACAGCACATGGGTGCTaGGCGTCCGGAAGTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RCAPLLCRSSHLRSCSLKTAHGC*ASGSGC Trigger: ACATCCACTTCCGGACGCCCAGCACCCATGTGCTGT...CTTCAAAGAACAGCTTCTGAGATGGCTGCTCCTGCAGAGTAATGGCGCACACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGGAAATTGCAAGTTCAGAATTCTGACCTGCTCTGGAAGACAGTCAGGCCCCTCAGACAGCACATaGGTGCTGGGCGTCCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQGNCKFRILTCSGRQSGPSDST*VLGVRK Trigger: CTTCCGGACGCCCAGCACCCATGTGCTGTCTGAGGG...GCCTGACTGTCTTCCAGAGCAGGTCAGAATTCTGAACTTGCAATTTCCTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGTAGGTAAGGGAAGGAAGGCAAGGAAATTGCAAGTTCAGAATTCTGACCCCTCAGACAGCACATaGGTGCTGGGCGTCCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQVGKGRKARKLQVQNSDPSDST*VLGVRK Trigger: CTTCCGGACGCCCAGCACCCATGTGCTGTCTGAGGG...GTCAGAATTCTGAACTTGCAATTTCCTTGCCTTCCTTCCCTTACCTACCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGGTCACCTCTCTGGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTTTTGGTCTCTCATATaGTTGACGATGAAGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRSPLWPPEQGPCFSSQPFWSLI*LTMKFA Trigger: GGCAAACTTCATCGTCAACCATATGAGAGACCAAAA...GGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCCAGAGAGGTGACCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTAAGTGCTGGGGTTATAGGTGTGCGCCATTACTCTGCAGGAGCAGCCATCACTGTGCGGGCCACCTaGTTCCAGTTGTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLSAGVIGVRHYSAGAAITVRAT*FQLSFS Trigger: GGAGAAGGACAACTGGAACCAGGTGGCCCGCACAGT...GATGGCTGCTCCTGCAGAGTAATGGCGCACACCTATAACCCCAGCACTTAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGGAAATTGCAAGTTCAGAATTCTGACCTGCTCTGGAAGACAGTCAGGCTGGGTCTTCCTCTGCTaGGCGGGACATGTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQGNCKFRILTCSGRQSGWVFLC*AGHVQE Trigger: CTCCTGCACATGTCCCGCCCAGCAGAGGAAGACCCA...GCCTGACTGTCTTCCAGAGCAGGTCAGAATTCTGAACTTGCAATTTCCTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGTGCGCCATTACTCTGCAGGAGCAGCCATCTCAGAAGCTGTTCTTTGAAGCAGCCCATGCCGCTCTaGTTGCTTCTCAAACATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RCAPLLCRSSHLRSCSLKQPMPL*LLLKHE Trigger: CTCATGTTTGAGAAGCAATCAGAGCGGCATGGGCTG...CTTCAAAGAACAGCTTCTGAGATGGCTGCTCCTGCAGAGTAATGGCGCACACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGGAAATTGCAAGTTCAGAATTCTGACCTGCTCTGGAAGACAGTCAGGCCATTCAGGCCCCAACTaGCTGGGAGGGCACACACAA | + |
|
Preference number: 4 (lower is better) Translates to: RQGNCKFRILTCSGRQSGHSGPN*LGGHTQ Trigger: TTGTGTGTGCCCTCCCAGGCAGTTGGGGCCTGAATG...GCCTGACTGTCTTCCAGAGCAGGTCAGAATTCTGAACTTGCAATTTCCTTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073252.9 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGGAAATTGCAAGTTCAGAATTCTGACCTGCTCTGGAAGACAGTCAGGCAGCTCCTGTTGGACCTaGTCAGAGCTTGCTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQGNCKFRILTCSGRQSGSSCWT*SELAGG Trigger: GCCTCCAGCAAGCTCTGAGCAGGTCCAACAGGAGCT...GCCTGACTGTCTTCCAGAGCAGGTCAGAATTCTGAACTTGCAATTTCCTTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGGAAATTGCAAGTTCAGAATTCTGACCTGCTCTGGAAGACAGTCAGGCAGGGAAAGGCTGGAGTaGGGGCTGGTTGTAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: RQGNCKFRILTCSGRQSGRERLE*GLVVDT Trigger: GGTGTCTACAACCAGCCCCCACTCCAGCCTTTCCCT...GCCTGACTGTCTTCCAGAGCAGGTCAGAATTCTGAACTTGCAATTTCCTTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR TCA 90 bp | GGTCCTGAACAGCTCTCATCTAGAGGTCCTCCCAGGGTAGAAAGACCCCCTTTCGGCTGTATACTTGAGTaGACTGAATTTGAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPEQLSSRGPPRVERPPFGCILE*TEFEGA Trigger: TGCTCCCTCAAATTCAGTTCACTCAAGTATACAGCC...GAAAGGGGGTCTTTCTACCCTGGGAGGACCTCTAGATGAGAGCTGTTCAGGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAGTGCTGGGGTTATAGGTGTGCGCCATTACTCTGCAGGAGCAGCCATCCTGGCTTCATCTCATTaGAGAGCTCCTGTTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: FLSAGVIGVRHYSAGAAILASSH*RAPVGP Trigger: AGGTCCAACAGGAGCTCTTCAATGAGATGAAGCCAG...GATGGCTGCTCCTGCAGAGTAATGGCGCACACCTATAACCCCAGCACTTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | ATAGCATCATTTCTACCTCATTCTATTGGTTACTCTGAACTGCCAGGTACAGAGGCTGGGCGGGACATGTaGAGGAGCTTGGGCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IASFLPHSIGYSELPGTEAGRDM*RSLGRV Trigger: GACCCTGCCCAAGCTCCTGCACATGTCCCGCCCAGC...CTCTGTACCTGGCAGTTCAGAGTAACCAATAGAATGAGGTAGAAATGATGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGCGCCATTACTCTGCAGGAGCAGCCATCTCAGAAGCTGTTCTTTGAAGTGCCCCATCCACAGCTaGCTTCATCTCATTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RCAPLLCRSSHLRSCSLKCPIHS*LHLIEE Trigger: CTCTTCAATGAGATGAAGCCAGCTGTGGATGGGGCA...CTTCAAAGAACAGCTTCTGAGATGGCTGCTCCTGCAGAGTAATGGCGCACACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| 3UTR CAA 72 bp | AGGGACTGTCTCAAGACACGATTTGAGAGGTGGGCTTaGCAGGCTACACTAAGACCTAGTCTCCTTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RDCLKTRFERWA*QATLRPSLLAP Trigger: AGGAGCAAGGAGACTAGGTCTTAGTGTAGCCTGCAAAGCCCACCTCTCAAATCGTGTCTTGAGACAGTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| 3UTR CAA 72 bp | AAGACCCCCTTTCTAGTCTACCTGCCTGTGTGGCTCTaGATAGGTGGACCCTTTTACAGAGTCTCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KTPFLVYLPVWL*IGGPFYRVSAV Trigger: CACTGCTGAGACTCTGTAAAAGGGTCCACCTATCAAGAGCCACACAGGCAGGTAGACTAGAAAGGGGGTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCTGAACAGCTCTCATCTAGAGGTCCTCCCAGGGTAGAAAGACCCCCTTTCTCATTGAATAGGTGCTaGATCAGCCTTTGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPEQLSSRGPPRVERPPFSLNRC*ISLCSS Trigger: TGAGGAACAAAGGCTGATCCAGCACCTATTCAATGA...GAAAGGGGGTCTTTCTACCCTGGGAGGACCTCTAGATGAGAGCTGTTCAGGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073252.9 |
||
| CDS-3UTR CCA 90 bp | ATAGCATCATTTCTACCTCATTCTATTGGTTACTCTGAACTGCCAGGTACAGAGCCAAGGGGATGGCCATaGAAGTGGCCGGCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IASFLPHSIGYSELPGTEPRGWP*KWPAAS Trigger: AGAGGCTGCCGGCCACTTCCATGGCCATCCCCTTGG...CTCTGTACCTGGCAGTTCAGAGTAACCAATAGAATGAGGTAGAAATGATGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| 3UTR CAA 72 bp | CATCTCAAGTGTCTCCCTCCTTTATTTAGAAAGGAATaGTTTCCGGAAGGGAGCTCTCCCGACCATGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLKCLPPLFRKE*FPEGSSPDHGL Trigger: GAGGCCATGGTCGGGAGAGCTCCCTTCCGGAAACAATTCCTTTCTAAATAAAGGAGGGAGACACTTGAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR TCA 90 bp | CCCCAGGTAGGTAAGGGAAGGAAGGCAAGGAAATTGCAAGTTCAGAATTCTGACCTGGCTTCATCTCATTaGAGAGCTCCTGTTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: PQVGKGRKARKLQVQNSDLASSH*RAPVGP Trigger: AGGTCCAACAGGAGCTCTTCAATGAGATGAAGCCAG...GTCAGAATTCTGAACTTGCAATTTCCTTGCCTTCCTTCCCTTACCTACCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGTAGGTAAGGGAAGGAAGGCAAGGAAATTGCAAGTTCAGAATTCTGACTTGAAGAGCTCCTGTTaGACCTGCTCAGAGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQVGKGRKARKLQVQNSDLKSSC*TCSELA Trigger: AGCAAGCTCTGAGCAGGTCCAACAGGAGCTCTTCAA...GTCAGAATTCTGAACTTGCAATTTCCTTGCCTTCCTTCCCTTACCTACCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | ATTCTATTGGTTACTCTGAACTGCCAGGTACAGAGAGCAGGGACTGTCTCAAGAGTTGACGATGAAGTTTaGCCCATCCACAGCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILLVTLNCQVQRAGTVSRVDDEV*PIHSWL Trigger: AAGCCAGCTGTGGATGGGGCAAACTTCATCGTCAAC...TCTTGAGACAGTCCCTGCTCTCTGTACCTGGCAGTTCAGAGTAACCAATAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | ATAGCATCATTTCTACCTCATTCTATTGGTTACTCTGAACTGCCAGGTACAGAGAGGGAAAGGCTGGAGTaGGGGCTGGTTGTAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: IASFLPHSIGYSELPGTERERLE*GLVVDT Trigger: GGTGTCTACAACCAGCCCCCACTCCAGCCTTTCCCT...CTCTGTACCTGGCAGTTCAGAGTAACCAATAGAATGAGGTAGAAATGATGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGGAAATTGCAAGTTCAGAATTCTGACCTGCTCTGGAAGACAGTCAGGCAATACTCCTCTGCTTTaGAGATGTATCCCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQGNCKFRILTCSGRQSGNTPLL*RCIPES Trigger: GCTCTCTGGGATACATCTGCAAAGCAGAGGAGTATT...GCCTGACTGTCTTCCAGAGCAGGTCAGAATTCTGAACTTGCAATTTCCTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGCGCCATTACTCTGCAGGAGCAGCCATCTCAGAAGCTGTTCTTTGAAGTTTTGGTCTCTCATATaGTTGACGATGAAGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RCAPLLCRSSHLRSCSLKFWSLI*LTMKFA Trigger: GGCAAACTTCATCGTCAACCATATGAGAGACCAAAA...CTTCAAAGAACAGCTTCTGAGATGGCTGCTCCTGCAGAGTAATGGCGCACACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CCA 90 bp | ATAGCATCATTTCTACCTCATTCTATTGGTTACTCTGAACTGCCAGGTACAGAGTTGAAGAGCTCCTGTTaGACCTGCTCAGAGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IASFLPHSIGYSELPGTELKSSC*TCSELA Trigger: AGCAAGCTCTGAGCAGGTCCAACAGGAGCTCTTCAA...CTCTGTACCTGGCAGTTCAGAGTAACCAATAGAATGAGGTAGAAATGATGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| 3UTR CAA 72 bp | AGGATAGTTCTGAATGTGCCTTCCTTTAGGATAGGGTaGAAGACCAGACTCAATAAGAACACTGGGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RIVLNVPSFRIG*KTRLNKNTGCT Trigger: TGTGCACCCAGTGTTCTTATTGAGTCTGGTCTTCAACCCTATCCTAAAGGAAGGCACATTCAGAACTATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| 3UTR CAA 72 bp | TTACTCTGCAGGAGCAGCCATCTCAGAAGCTGTTCTTaGAAGGAGCATAGCATCATTTCTACCTCATTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLCRSSHLRSCS*KEHSIISTSFY Trigger: ATAGAATGAGGTAGAAATGATGCTATGCTCCTTCAAAGAACAGCTTCTGAGATGGCTGCTCCTGCAGAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR GCA 90 bp | ATAGCATCATTTCTACCTCATTCTATTGGTTACTCTGAACTGCCAGGTACAGAGAATACTCCTCTGCTTTaGAGATGTATCCCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IASFLPHSIGYSELPGTENTPLL*RCIPES Trigger: GCTCTCTGGGATACATCTGCAAAGCAGAGGAGTATT...CTCTGTACCTGGCAGTTCAGAGTAACCAATAGAATGAGGTAGAAATGATGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS CCA 90 bp | GATGTATCCCAGAGAGCTGCTTCTCCGGATGAGAGCCCTGGGGCCTaGGTCTTCCTCTGCTGGGCGGGACATGTGCAGGAGCTTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DVSQRAASPDESPGA*VFLCWAGHVQELGQ Trigger: CTGCCCAAGCTCCTGCACATGTCCCGCCCAGCAGAGGAAGACCCAGGCCCCAGGGCTCTCATCCGGAGAAGCAGCTCTCTGGGATACATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS GCA 90 bp | CCATCCACAGCTGGCTTCATCTCATTGAAGAGCTCCTGTTGGACCTaGTCAGAGCTTGCTGGAGGCCTGCGGGCTGTGGTGAGGCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSTAGFISLKSSCWT*SELAGGLRAVVRRR Trigger: CCGGCGCCTCACCACAGCCCGCAGGCCTCCAGCAAGCTCTGAGCAGGTCCAACAGGAGCTCTTCAATGAGATGAAGCCAGCTGTGGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS TCA 90 bp | GGTTGTAGACACCCTGCAGGAAGATCCAGGCTGTGCCCACCACCATaGCGGGTGTCACCACAAACAGGCAGAGACGGTCCACTGTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GCRHPAGRSRLCPPP*RVSPQTGRDGPLCG Trigger: CCCGCACAGTGGACCGTCTCTGCCTGTTTGTGGTGACACCCGTCATGGTGGTGGGCACAGCCTGGATCTTCCTGCAGGGTGTCTACAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCTGAACAGCTCTCATCTAGAGGTCCTCCCAGGGTAGAAAGACCCCCTTTCGGACCTGCTCAGAGCTaGCTGGAGGCCTGCGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPEQLSSRGPPRVERPPFGPAQS*LEACGL Trigger: CAGCCCGCAGGCCTCCAGCAAGCTCTGAGCAGGTCC...GAAAGGGGGTCTTTCTACCCTGGGAGGACCTCTAGATGAGAGCTGTTCAGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS TCA 90 bp | ACTCCTCTGCTTTGCAGATGTATCCCAGAGAGCTGCTTCTCCGGATaGGAGCCCTGGGGCCTGGGTCTTCCTCTGCTGGGCGGGACATGT | + |
|
Preference number: 5 (lower is better) Translates to: TPLLCRCIPESCFSG*EPWGLGLPLLGGTC Trigger: ACATGTCCCGCCCAGCAGAGGAAGACCCAGGCCCCAGGGCTCTCATCCGGAGAAGCAGCTCTCTGGGATACATCTGCAAAGCAGAGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGGTCACCTCTCTGGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCGCTGGCTTCATCTCATaGAAGAGCTCCTGTTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: PRSPLWPPEQGPCFSSQPAGFIS*KSSCWT Trigger: GGTCCAACAGGAGCTCTTCAATGAGATGAAGCCAGC...GGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCCAGAGAGGTGACCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAGCCTCCCTCTCCTGGTCTCTCATATGGTaGACGATGAAGTTTGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPLSKAPASPHNPGASLSWSLIW*TMKFAP Trigger: TGGGGCAAACTTCATCGTCAACCATATGAGAGACCA...GGAGAGGGAGGCTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS GCA 90 bp | CTGCGGGCTGTGGTGAGGCGCCGGGCCAGCCCATGCCGCTCTGATTaGTTCTCAAACATGAGGTCACTGCGGGACTTAAGTGAGAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: LRAVVRRRASPCRSD*FSNMRSLRDLSEKY Trigger: GTATTTCTCACTTAAGTCCCGCAGTGACCTCATGTTTGAGAAGCAATCAGAGCGGCATGGGCTGGCCCGGCGCCTCACCACAGCCCGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS CCA 90 bp | TTTGCCCCATCCACAGCTGGCTTCATCTCATTGAAGAGCTCCTGTTaGACCTGCTCAGAGCTTGCTGGAGGCCTGCGGGCTGTGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FAPSTAGFISLKSSC*TCSELAGGLRAVVR Trigger: CCTCACCACAGCCCGCAGGCCTCCAGCAAGCTCTGAGCAGGTCCAACAGGAGCTCTTCAATGAGATGAAGCCAGCTGTGGATGGGGCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS TCA 90 bp | CAATCTCTGGTAGCCACACCATGTCAGGGGGCAGGCGCAGGACAGTaGTGTTCCCGAAGTCGTTGGCATCCCACTGTAGACGGCTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: QSLVATPCQGAGAGQ*CSRSRWHPTVDGCL Trigger: TAGACAGCCGTCTACAGTGGGATGCCAACGACTTCGGGAACATCACTGTCCTGCGCCTGCCCCCTGACATGGTGTGGCTACCAGAGATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073252.9 |
||
| CDS TCA 90 bp | CATCTTGGTGGTTGGTGCTGTCCATCGGGACACTGGGGTCCACATTaGGCTTGGCTGCCCGATGCACTATCTCCCACTCACCGTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLGGWCCPSGHWGPH*AWLPDALSPTHRSL Trigger: CAGAGAACGGTGAGTGGGAGATAGTGCATCGGGCAGCCAAGCTCAATGTGGACCCCAGTGTCCCGATGGACAGCACCAACCACCAAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAGCCTCCCTCTCCAACGAGCCATCATTGTaGTTCTCCAGTACAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPLSKAPASPHNPGASLSNEPSL*FSSTIS Trigger: AGAGATTGTACTGGAGAACAACAATGATGGCTCGTT...GGAGAGGGAGGCTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCCCTGAGCAAGGCCCCTGCTTCTCCTCACAACCCTGGAGCCTCCCTCTCCTCCTTGGCTGTATACTaGAGTGAACTGAATTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPLSKAPASPHNPGASLSSLAVY*SELNLR Trigger: CCTCAAATTCAGTTCACTCAAGTATACAGCCAAGGA...GGAGAGGGAGGCTCCAGGGTTGTGAGGAGAAGCAGGGGCCTTGCTCAGGGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS GCA 90 bp | CTGTCCATCGGGACACTGGGGTCCACATTGAGCTTGGCTGCCCGATaGACTATCTCCCACTCACCGTTCTCTGTGAAACCTTCAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSIGTLGSTLSLAAR*TISHSPFSVKPSGS Trigger: TGACCCTGAAGGTTTCACAGAGAACGGTGAGTGGGAGATAGTGCATCGGGCAGCCAAGCTCAATGTGGACCCCAGTGTCCCGATGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS CCA 90 bp | GGCAGGGTCTCCAGGAAGAACTTCTTGACTCCCTCAGACAGCACATaGGTGCTGGGCGTCCGGAAGTGGATGTTCAGTACGATGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: GRVSRKNFLTPSDST*VLGVRKWMFSTMTQ Trigger: CTGTGTCATCGTACTGAACATCCACTTCCGGACGCCCAGCACCCATGTGCTGTCTGAGGGAGTCAAGAAGTTCTTCCTGGAGACCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCAAGGGCAGGAACTACGTGCCGTTCTCAGACTGCTGTCTGCCTGGCTGTCGCTGGCTTCATCTCATaGAAGAGCTCCTGTTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SSRAGTTCRSQTAVCLAVAGFIS*KSSCWT Trigger: GGTCCAACAGGAGCTCTTCAATGAGATGAAGCCAGC...GACAGCCAGGCAGACAGCAGTCTGAGAACGGCACGTAGTTCCTGCCCTTGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS TCA 90 bp | CCTTTCGAGCCACCGGCCGCAGGTCTTTGTCGTAGCCCTTCTCATTaGATAGGTGCTGGATCAGCCTTTGTTCCTCATTCAGGCCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PFEPPAAGLCRSPSH*IGAGSAFVPHSGPN Trigger: GTTGGGGCCTGAATGAGGAACAAAGGCTGATCCAGCACCTATTCAATGAGAAGGGCTACGACAAAGACCTGCGGCCGGTGGCTCGAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073252.9 |
||
| CDS CCA 90 bp | TTCTTGACTCCCTCAGACAGCACATGGGTGCTGGGCGTCCGGAAGTaGATGTTCAGTACGATGACACAGATCACCACCACCATGGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: FLTPSDSTWVLGVRK*MFSTMTQITTTMVT Trigger: GGTCACCATGGTGGTGGTGATCTGTGTCATCGTACTGAACATCCACTTCCGGACGCCCAGCACCCATGTGCTGTCTGAGGGAGTCAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CAA 90 bp | AGAGTGGGAGAGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTCCAGGAAGAACTTCTaGACTCCCTCAGACAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RVGEWKGEAAVLCVCVCVSRKNF*TPSDST Trigger: TGTGCTGTCTGAGGGAGTCAAGAAGTTCTTCCTGGA...CACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACTCTCCCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTATTGGTTACTCTGAACTGCCAGGTACAGAGAGCAGGGACTGTCTCAAGAGGACCTGCTCAGAGCTaGCTGGAGGCCTGCGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILLVTLNCQVQRAGTVSRGPAQS*LEACGL Trigger: CAGCCCGCAGGCCTCCAGCAAGCTCTGAGCAGGTCC...TCTTGAGACAGTCCCTGCTCTCTGTACCTGGCAGTTCAGAGTAACCAATAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CAA 90 bp | GCTCAAGGGCAGGAACTACGTGCCGTTCTCAGACTGCTGTCTGCCTGGCTGTCTTGGTCTCTCATATGGTaGACGATGAAGTTTGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AQGQELRAVLRLLSAWLSWSLIW*TMKFAP Trigger: TGGGGCAAACTTCATCGTCAACCATATGAGAGACCA...AGACAGCCAGGCAGACAGCAGTCTGAGAACGGCACGTAGTTCCTGCCCTTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS GCA 90 bp | CGGGCGGCAGCCAGGTCACATAGCCCGAGTCATAGACAAGCACATTaGAGGCATAAGAAATCTGGAACGAGCCATCATTGTTGTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RAAARSHSPSHRQAH*RHKKSGTSHHCCSP Trigger: TGGAGAACAACAATGATGGCTCGTTCCAGATTTCTTATGCCTGCAATGTGCTTGTCTATGACTCGGGCTATGTGACCTGGCTGCCGCCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAACGAGCCATCATaGTTGTTCTCCAGTACAATC | + |
|
Preference number: 5 (lower is better) Translates to: SGRERPQCCVCVCVCVCVWNEPS*LFSSTI Trigger: GATTGTACTGGAGAACAACAATGATGGCTCGTTCCA...CACACACACACACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCAAGGGCAGGAACTACGTGCCGTTCTCAGACTGCTGTCTGCCTGGCTGTCTCCTTGGCTGTATACTaGAGTGAACTGAATTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRAGTTCRSQTAVCLAVSLAVY*SELNLR Trigger: CCTCAAATTCAGTTCACTCAAGTATACAGCCAAGGA...GACAGCCAGGCAGACAGCAGTCTGAGAACGGCACGTAGTTCCTGCCCTTGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGAATTGTTTCCGGAAGGGAGCTCTCCCGACCATGGCCTCTGCCCAGCCACCTAAGTGTGATCTCCTaGGCTGTATACTTGAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KGIVSGRELSRPWPLPSHLSVIS*AVYLSE Trigger: TTCACTCAAGTATACAGCCAAGGAGATCACACTTAG...GTGGCTGGGCAGAGGCCATGGTCGGGAGAGCTCCCTTCCGGAAACAATTCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS-3UTR CAA 90 bp | GGACAGCCCACCATCCCAGTAAACCTCCTTCCCTGGGGAATGGAGAGTAGTCACAAATACTCCTCTGCTTaGCAGATGTATCCCAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: GQPTIPVNLLPWGMESSHKYSSA*QMYPRE Trigger: CTCTCTGGGATACATCTGCAAAGCAGAGGAGTATTT...GTGACTACTCTCCATTCCCCAGGGAAGGAGGTTTACTGGGATGGTGGGCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS-3UTR CAA 90 bp | AGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACGAGCCATCATTGTaGTTCTCCAGTACAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: SGRERPQCCVCVCVCVCVNEPSL*FSSTIS Trigger: AGAGATTGTACTGGAGAACAACAATGATGGCTCGTT...CACACACACACACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS-3UTR CAA 90 bp | TTCTTAAGTGCTGGGGTTATAGGTGTGCGCCATTACTCTGCAGGAGCAGCCATCTTGAGTGAACTGAATTaGAGGGAGCAGTTCTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: FLSAGVIGVRHYSAGAAILSELN*REQFCQ Trigger: CTGGCAGAACTGCTCCCTCAAATTCAGTTCACTCAA...GATGGCTGCTCCTGCAGAGTAATGGCGCACACCTATAACCCCAGCACTTAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS-3UTR CAA 90 bp | GGACAGCCCACCATCCCAGTAAACCTCCTTCCCTGGGGAATGGAGAGTAGTCACCTCATTGTAACTGTTTaGGTCTCTCATATGGTTGAC | + |
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Preference number: 5 (lower is better) Translates to: GQPTIPVNLLPWGMESSHLIVTV*VSHMVD Trigger: GTCAACCATATGAGAGACCAAAACAGTTACAATGAG...GTGACTACTCTCCATTCCCCAGGGAAGGAGGTTTACTGGGATGGTGGGCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS-3UTR CAA 90 bp | AGTGGAAGGGAGAGGCCGCAGTGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCATTGTAACTGTTTaGGTCTCTCATATGGTTGAC | + |
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Preference number: 5 (lower is better) Translates to: SGRERPQCCVCVCVCVCVLIVTV*VSHMVD Trigger: GTCAACCATATGAGAGACCAAAACAGTTACAATGAG...CACACACACACACACACACACACACACACAGCACTGCGGCCTCTCCCTTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS-3UTR CAA 90 bp | TTCTTAAGTGCTGGGGTTATAGGTGTGCGCCATTACTCTGCAGGAGCAGCCATCAAATACTCCTCTGCTTaGCAGATGTATCCCAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: FLSAGVIGVRHYSAGAAIKYSSA*QMYPRE Trigger: CTCTCTGGGATACATCTGCAAAGCAGAGGAGTATTT...GATGGCTGCTCCTGCAGAGTAATGGCGCACACCTATAACCCCAGCACTTAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS-3UTR CAA 90 bp | ATTCTATTGGTTACTCTGAACTGCCAGGTACAGAGAGCAGGGACTGTCTCAAGATCCAGGAAGAACTTCTaGACTCCCTCAGACAGCACA | + |
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Preference number: 5 (lower is better) Translates to: ILLVTLNCQVQRAGTVSRSRKNF*TPSDST Trigger: TGTGCTGTCTGAGGGAGTCAAGAAGTTCTTCCTGGA...TCTTGAGACAGTCCCTGCTCTCTGTACCTGGCAGTTCAGAGTAACCAATAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS-3UTR CAA 90 bp | AGGCAAGGAAATTGCAAGTTCAGAATTCTGACCTGCTCTGGAAGACAGTCAGGCTGGAACGAGCCATCATaGTTGTTCTCCAGTACAATC | + |
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Preference number: 5 (lower is better) Translates to: RQGNCKFRILTCSGRQSGWNEPS*LFSSTI Trigger: GATTGTACTGGAGAACAACAATGATGGCTCGTTCCA...GCCTGACTGTCTTCCAGAGCAGGTCAGAATTCTGAACTTGCAATTTCCTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS GCA 90 bp | CTCATTGTAACTGTTTTGGTCTCTCATATGGTTGACGATGAAGTTTaGCCCATCCACAGCTGGCTTCATCTCATTGAAGAGCTCCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: LIVTVLVSHMVDDEV*PIHSWLHLIEELLL Trigger: CAACAGGAGCTCTTCAATGAGATGAAGCCAGCTGTGGATGGGGCAAACTTCATCGTCAACCATATGAGAGACCAAAACAGTTACAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS-3UTR CAA 90 bp | CCCCAGGTAGGTAAGGGAAGGAAGGCAAGGAAATTGCAAGTTCAGAATTCTGACCTAAGTGTGATCTCCTaGGCTGTATACTTGAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: PQVGKGRKARKLQVQNSDLSVIS*AVYLSE Trigger: TTCACTCAAGTATACAGCCAAGGAGATCACACTTAG...GTCAGAATTCTGAACTTGCAATTTCCTTGCCTTCCTTCCCTTACCTACCTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS CCA 72 bp | CCGGATGAGAGCCCTGGGGCCTGGGTCTTCCTCTGCTaGGCGGGACATGTGCAGGAGCTTGGGCAGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PDESPGAWVFLC*AGHVQELGQGL Trigger: GAGACCCTGCCCAAGCTCCTGCACATGTCCCGCCCAGCAGAGGAAGACCCAGGCCCCAGGGCTCTCATCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS GCA 72 bp | TCTCCGGATGAGAGCCCTGGGGCCTGGGTCTTCCTCTaGTGGGCGGGACATGTGCAGGAGCTTGGGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: SPDESPGAWVFL*WAGHVQELGQG Trigger: ACCCTGCCCAAGCTCCTGCACATGTCCCGCCCAGCAGAGGAAGACCCAGGCCCCAGGGCTCTCATCCGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS TCA 72 bp | GGCTGTGGTGAGGCGCCGGGCCAGCCCATGCCGCTCTaGTTGCTTCTCAAACATGAGGTCACTGCGGGACTT | + |
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Preference number: 6 (lower is better) Translates to: GCGEAPGQPMPL*LLLKHEVTAGL Trigger: AAGTCCCGCAGTGACCTCATGTTTGAGAAGCAATCAGAGCGGCATGGGCTGGCCCGGCGCCTCACCACAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS CAA 72 bp | GGGGGCAGGCGCAGGACAGTGATGTTCCCGAAGTCGTaGGCATCCCACTGTAGACGGCTGTCTACCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: GGRRRTVMFPKS*ASHCRRLSTQA Trigger: TGCCTGGGTAGACAGCCGTCTACAGTGGGATGCCAACGACTTCGGGAACATCACTGTCCTGCGCCTGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073252.9 |
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| CDS TCA 72 bp | GTAGCCACACCATGTCAGGGGGCAGGCGCAGGACAGTaGTGTTCCCGAAGTCGTTGGCATCCCACTGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: VATPCQGAGAGQ*CSRSRWHPTVD Trigger: GTCTACAGTGGGATGCCAACGACTTCGGGAACATCACTGTCCTGCGCCTGCCCCCTGACATGGTGTGGCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073252.9 |
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| CDS TCA 72 bp | GGTTGGTGCTGTCCATCGGGACACTGGGGTCCACATTaGGCTTGGCTGCCCGATGCACTATCTCCCACTCAC | + |
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Preference number: 6 (lower is better) Translates to: GWCCPSGHWGPH*AWLPDALSPTH Trigger: GTGAGTGGGAGATAGTGCATCGGGCAGCCAAGCTCAATGTGGACCCCAGTGTCCCGATGGACAGCACCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS GCA 72 bp | GTGGTGAGGCGCCGGGCCAGCCCATGCCGCTCTGATTaGTTCTCAAACATGAGGTCACTGCGGGACTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: VVRRRASPCRSD*FSNMRSLRDLS Trigger: ACTTAAGTCCCGCAGTGACCTCATGTTTGAGAAGCAATCAGAGCGGCATGGGCTGGCCCGGCGCCTCACCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS GCA 72 bp | GCTGGCTTCATCTCATTGAAGAGCTCCTGTTGGACCTaGTCAGAGCTTGCTGGAGGCCTGCGGGCTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: AGFISLKSSCWT*SELAGGLRAVV Trigger: CACCACAGCCCGCAGGCCTCCAGCAAGCTCTGAGCAGGTCCAACAGGAGCTCTTCAATGAGATGAAGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS GCA 72 bp | CGGGTGTCACCACAAACAGGCAGAGACGGTCCACTGTaGGGGCCACCTGGTTCCAGTTGTCCTTCTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: RVSPQTGRDGPL*GPPGSSCPSPH Trigger: ATGAGGAGAAGGACAACTGGAACCAGGTGGCCCGCACAGTGGACCGTCTCTGCCTGTTTGTGGTGACACCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS CAA 72 bp | GTGCTGTCCATCGGGACACTGGGGTCCACATTGAGCTaGGCTGCCCGATGCACTATCTCCCACTCACCGTTC | + |
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Preference number: 6 (lower is better) Translates to: VLSIGTLGSTLS*AARCTISHSPF Trigger: GAACGGTGAGTGGGAGATAGTGCATCGGGCAGCCAAGCTCAATGTGGACCCCAGTGTCCCGATGGACAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS CCA 72 bp | CCCTCAGACAGCACATGGGTGCTGGGCGTCCGGAAGTaGATGTTCAGTACGATGACACAGATCACCACCACC | + |
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Preference number: 6 (lower is better) Translates to: PSDSTWVLGVRK*MFSTMTQITTT Trigger: GGTGGTGGTGATCTGTGTCATCGTACTGAACATCCACTTCCGGACGCCCAGCACCCATGTGCTGTCTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS CAA 72 bp | AGGTTGGAGAGGGTGAGACTTAGGGCGACATCCACTTaGTCCTCCTTTCGAGCCACCGGCCGCAGGTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: RLERVRLRATST*SSFRATGRRSL Trigger: CAAAGACCTGCGGCCGGTGGCTCGAAAGGAGGACAAAGTGGATGTCGCCCTAAGTCTCACCCTCTCCAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073252.9 |
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| CDS CAA 72 bp | TGGTTGGTGCTGTCCATCGGGACACTGGGGTCCACATaGAGCTTGGCTGCCCGATGCACTATCTCCCACTCA | + |
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Preference number: 6 (lower is better) Translates to: WLVLSIGTLGST*SLAARCTISHS Trigger: TGAGTGGGAGATAGTGCATCGGGCAGCCAAGCTCAATGTGGACCCCAGTGTCCCGATGGACAGCACCAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS CAA 90 bp | TGGTGGTTGGTGCTGTCCATCGGGACACTGGGGTCCACATTGAGCTaGGCTGCCCGATGCACTATCTCCCACTCACCGTTCTCTGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: WWLVLSIGTLGSTLS*AARCTISHSPFSVK Trigger: TTTCACAGAGAACGGTGAGTGGGAGATAGTGCATCGGGCAGCCAAGCTCAATGTGGACCCCAGTGTCCCGATGGACAGCACCAACCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS CAA 90 bp | ACATCTTGGTGGTTGGTGCTGTCCATCGGGACACTGGGGTCCACATaGAGCTTGGCTGCCCGATGCACTATCTCCCACTCACCGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TSWWLVLSIGTLGST*SLAARCTISHSPFS Trigger: AGAGAACGGTGAGTGGGAGATAGTGCATCGGGCAGCCAAGCTCAATGTGGACCCCAGTGTCCCGATGGACAGCACCAACCACCAAGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS GCA 72 bp | GGGACACTGGGGTCCACATTGAGCTTGGCTGCCCGATaGACTATCTCCCACTCACCGTTCTCTGTGAAACCT | + |
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Preference number: 6 (lower is better) Translates to: GTLGSTLSLAAR*TISHSPFSVKP Trigger: AGGTTTCACAGAGAACGGTGAGTGGGAGATAGTGCATCGGGCAGCCAAGCTCAATGTGGACCCCAGTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS CCA 72 bp | TCCAGGAAGAACTTCTTGACTCCCTCAGACAGCACATaGGTGCTGGGCGTCCGGAAGTGGATGTTCAGTACG | + |
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Preference number: 6 (lower is better) Translates to: SRKNFLTPSDST*VLGVRKWMFST Trigger: CGTACTGAACATCCACTTCCGGACGCCCAGCACCCATGTGCTGTCTGAGGGAGTCAAGAAGTTCTTCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS TCA 72 bp | CCACCGGCCGCAGGTCTTTGTCGTAGCCCTTCTCATTaGATAGGTGCTGGATCAGCCTTTGTTCCTCATTCA | + |
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Preference number: 6 (lower is better) Translates to: PPAAGLCRSPSH*IGAGSAFVPHS Trigger: TGAATGAGGAACAAAGGCTGATCCAGCACCTATTCAATGAGAAGGGCTACGACAAAGACCTGCGGCCGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073252.9 |
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| CDS CAA 90 bp | AACATGAGGTCACTGCGGGACTTAAGTGAGAAATACTCCTCTGCTTaGCAGATGTATCCCAGAGAGCTGCTTCTCCGGATGAGAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: NMRSLRDLSEKYSSA*QMYPRELLLRMRAL Trigger: CAGGGCTCTCATCCGGAGAAGCAGCTCTCTGGGATACATCTGCAAAGCAGAGGAGTATTTCTCACTTAAGTCCCGCAGTGACCTCATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS CAA 72 bp | TCACTGCGGGACTTAAGTGAGAAATACTCCTCTGCTTaGCAGATGTATCCCAGAGAGCTGCTTCTCCGGATG | + |
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Preference number: 6 (lower is better) Translates to: SLRDLSEKYSSA*QMYPRELLLRM Trigger: CATCCGGAGAAGCAGCTCTCTGGGATACATCTGCAAAGCAGAGGAGTATTTCTCACTTAAGTCCCGCAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS CAA 90 bp | GAGCGGTTGTTTTCCTCCTCCTGCTTCAGGCTAAGTGTGATCTCCTaGGCTGTATACTTGAGTGAACTGAATTTGAGGGAGCAGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ERLFSSSCFRLSVIS*AVYLSELNLREQFC Trigger: GCAGAACTGCTCCCTCAAATTCAGTTCACTCAAGTATACAGCCAAGGAGATCACACTTAGCCTGAAGCAGGAGGAGGAAAACAACCGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS TCA 72 bp | TTGCTTCTCAAACATGAGGTCACTGCGGGACTTAAGTaGGAAATACTCCTCTGCTTTGCAGATGTATCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LLLKHEVTAGLK*EILLCFADVSQ Trigger: CTGGGATACATCTGCAAAGCAGAGGAGTATTTCTCACTTAAGTCCCGCAGTGACCTCATGTTTGAGAAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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| CDS CAA 72 bp | TTTTCCTCCTCCTGCTTCAGGCTAAGTGTGATCTCCTaGGCTGTATACTTGAGTGAACTGAATTTGAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: FSSSCFRLSVIS*AVYLSELNLRE Trigger: CTCCCTCAAATTCAGTTCACTCAAGTATACAGCCAAGGAGATCACACTTAGCCTGAAGCAGGAGGAGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073252.9 ENSMUST00000186373.2 |
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