Pregenerated sensors for CHRNB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031492Ensembl transcript IDs: ENSMUST00000060943.5, ENSMUST00000079463.12, ENSMUST00000211104.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCGCCATGGGCAGTGAGGGGTTCATGCAGGCTGCTTGCCAGGGTTaGAAGCATGATGCTGGTAGTCTGAGCGCAGAGTCTCCCGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: PAMGSEGFMQAACQG*KHDAGSLSAESPAV Trigger: CACAGCGGGAGACTCTGCGCTCAGACTACCAGCATCATGCTTCCAACCCTGGCAAGCAGCCTGCATGAACCCCTCACTGCCCATGGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR GCA 90 bp | AGGGCTGACCCCGCCATGGGCAGTGAGGGGTTCATGCAGGCTGCTTaGCAGGGTTGGAAGCATGATGCTGGTAGTCTGAGCGCAGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: RADPAMGSEGFMQAA*QGWKHDAGSLSAES Trigger: AGACTCTGCGCTCAGACTACCAGCATCATGCTTCCAACCCTGGCAAGCAGCCTGCATGAACCCCTCACTGCCCATGGCGGGGTCAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR GCA 90 bp | GCAGAGTCTCCCGCTGTGCTATCAGCAAGAGCTCCTACCCTCCCTTaGTCACACAGACTGATACAGCTAGAGAGGAACCAGCTGCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: AESPAVLSARAPTLP*SHRLIQLERNQLQS Trigger: ACTCTGCAGCTGGTTCCTCTCTAGCTGTATCAGTCTGTGTGAGCAAGGGAGGGTAGGAGCTCTTGCTGATAGCACAGCGGGAGACTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR CCA 90 bp | TGGTTGCCTAACAAGCGCCAAGTCTCTGGGTTTAGTCCTCAGCTCTaGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGGAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: WLPNKRQVSGFSPQL*RERERERERERGRG Trigger: CCCTCTCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGAGCTGAGGACTAAACCCAGAGACTTGGCGCTTGTTAGGCAACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| 3UTR CCA 90 bp | TGCTCACACAGACTGATACAGCTAGAGAGGAACCAGCTGCAGAGTTaGGACCAAAGGCTGGGACCACACCGGAGTATGCAGGCAACACAA | + |
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Preference number: 1 (lower is better) Translates to: CSHRLIQLERNQLQS*DQRLGPHRSMQATQ Trigger: TTGTGTTGCCTGCATACTCCGGTGTGGTCCCAGCCTTTGGTCCCAACTCTGCAGCTGGTTCCTCTCTAGCTGTATCAGTCTGTGTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR TCA 90 bp | GGGGCTCACCTTTCAAGGGACAGAGTACAGTTTCTGCACCTGGTCTaGAGCTGGAGGAAGGAGAGATCCTTCTGTGTTCTAGGGACACAG | + |
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Preference number: 1 (lower is better) Translates to: GAHLSRDRVQFLHLV*SWRKERSFCVLGTQ Trigger: CTGTGTCCCTAGAACACAGAAGGATCTCTCCTTCCTCCAGCTTCAGACCAGGTGCAGAAACTGTACTCTGTCCCTTGAAAGGTGAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| 3UTR TCA 90 bp | GGACTCAGAAGCAACGGCAGCAAAGTAAATCTGATAAACACTTCCTaGCTGTCCTGGAGGAGCATGGGGTGGGATGAGGAAAGGAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: GLRSNGSKVNLINTS*LSWRSMGWDEERRE Trigger: CTCCCTCCTTTCCTCATCCCACCCCATGCTCCTCCAGGACAGTCAGGAAGTGTTTATCAGATTTACTTTGCTGCCGTTGCTTCTGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR CCA 90 bp | GGCGATCTAAAGAACCTGAAGCAGAGATTCTCCTTCGACTGGCTGTaGTTGGACTCAGTGGGAACTCCAGATCAGGGTTTACAGCATTCC | + |
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Preference number: 1 (lower is better) Translates to: GDLKNLKQRFSFDWL*LDSVGTPDQGLQHS Trigger: GGAATGCTGTAAACCCTGATCTGGAGTTCCCACTGAGTCCAACCACAGCCAGTCGAAGGAGAATCTCTGCTTCAGGTTCTTTAGATCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR CCA 90 bp | GTGCAAGGCGATCTAAAGAACCTGAAGCAGAGATTCTCCTTCGACTaGCTGTGGTTGGACTCAGTGGGAACTCCAGATCAGGGTTTACAG | + |
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Preference number: 1 (lower is better) Translates to: VQGDLKNLKQRFSFD*LWLDSVGTPDQGLQ Trigger: CTGTAAACCCTGATCTGGAGTTCCCACTGAGTCCAACCACAGCCAGTCGAAGGAGAATCTCTGCTTCAGGTTCTTTAGATCGCCTTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR CCA 90 bp | GTTCCACTGTGTTTATCCATTTCTTTAAAAATCCATCTCGTGTGCTaGATCTTGTGGGCACACTATTGGCAGCGAGGTGGGAGAGCCGTG | + |
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Preference number: 1 (lower is better) Translates to: VPLCLSISLKIHLVC*ILWAHYWQRGGRAV Trigger: CACGGCTCTCCCACCTCGCTGCCAATAGTGTGCCCACAAGATCCAGCACACGAGATGGATTTTTAAAGAAATGGATAAACACAGTGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR CCA 90 bp | CAGGAAATAGAAAGCCATGGGCTGAGAAAATCTGTGAAAGAAGCATaGGGGCTCACCTTTCAAGGGACAGAGTACAGTTTCTGCACCTGG | + |
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Preference number: 1 (lower is better) Translates to: QEIESHGLRKSVKEA*GLTFQGTEYSFCTW Trigger: CCAGGTGCAGAAACTGTACTCTGTCCCTTGAAAGGTGAGCCCCCATGCTTCTTTCACAGATTTTCTCAGCCCATGGCTTTCTATTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| 3UTR GCA 90 bp | CTTGTTCCACTGTGTTTATCCATTTCTTTAAAAATCCATCTCGTGTaGTGGATCTTGTGGGCACACTATTGGCAGCGAGGTGGGAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: LVPLCLSISLKIHLV*WILWAHYWQRGGRA Trigger: GGCTCTCCCACCTCGCTGCCAATAGTGTGCCCACAAGATCCAGCACACGAGATGGATTTTTAAAGAAATGGATAAACACAGTGGAACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR GCA 90 bp | CAAAAGATAGAGTACAGGACTGAGGAGAACTTCAAAGGTCACGAATaGTCACCTCGTTCTGCTGACCCACAAGCTAAAAAGTCCTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: QKIEYRTEENFKGHE*SPRSADPQAKKSSG Trigger: CCCTGAGGACTTTTTAGCTTGTGGGTCAGCAGAACGAGGTGAGCATTCGTGACCTTTGAAGTTCTCCTCAGTCCTGTACTCTATCTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR TCA 90 bp | AGGGATAGGCAAATGGAGCATTTCGGAGCCTCCCACACAACAACATaGCATGGAGACTTCTCTGAATTGCCCAAATACATCTCTAATGGC | + |
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Preference number: 1 (lower is better) Translates to: RDRQMEHFGASHTTT*HGDFSELPKYISNG Trigger: GCCATTAGAGATGTATTTGGGCAATTCAGAGAAGTCTCCATGTCATGTTGTTGTGTGGGAGGCTCCGAAATGCTCCATTTGCCTATCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
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| 3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGCCCAGGCTaGACCTCTGAAGACACAGTAAATAGTAAAGCATGCTTTTTCATA | + |
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Preference number: 1 (lower is better) Translates to: RERERERERERASPG*TSEDTVNSKACFFI Trigger: TATGAAAAAGCATGCTTTACTATTTACTGTGTCTTCAGAGGTTCAGCCTGGGCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| 3UTR TCA 90 bp | CGTTCTTTTATCCACAGTATCATTCAGGAAGTCATAGCTAAGCCTTaGTTTTTATCACAATGTCTACCCTCAGGGAGCCACAGAGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: RSFIHSIIQEVIAKP*FLSQCLPSGSHRAD Trigger: GTCTGCTCTGTGGCTCCCTGAGGGTAGACATTGTGATAAAAATCAAGGCTTAGCTATGACTTCCTGAATGATACTGTGGATAAAAGAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR-3UTR CCA 90 bp | CTGACCCCGCCATGGGCAGTGAGGGGTTCATGCAGGCTGCTTGCCAGGGTTGGATGTCCTGGAGGAGCATaGGGTGGGATGAGGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LTPPWAVRGSCRLLARVGCPGGA*GGMRKG Trigger: TCCTTTCCTCATCCCACCCCATGCTCCTCCAGGACA...TCCAACCCTGGCAAGCAGCCTGCATGAACCCCTCACTGCCCATGGCGGGGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR-3UTR TCA 90 bp | CTGACCCCGCCATGGGCAGTGAGGGGTTCATGCAGGCTGCTTGCCAGGGTTGGACTAAACCTCTGCACCTaGCCTGTTGCCATGGTTACA | + |
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Preference number: 2 (lower is better) Translates to: LTPPWAVRGSCRLLARVGLNLCT*PVAMVT Trigger: TGTAACCATGGCAACAGGTCAGGTGCAGAGGTTTAG...TCCAACCCTGGCAAGCAGCCTGCATGAACCCCTCACTGCCCATGGCGGGGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR CAA 90 bp | CGCAGAGTCTCCCGCTGTGCTATCAGCAAGAGCTCCTACCCTCCCTaGCTCACACAGACTGATACAGCTAGAGAGGAACCAGCTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: RRVSRCAISKSSYPP*LTQTDTAREEPAAE Trigger: CTCTGCAGCTGGTTCCTCTCTAGCTGTATCAGTCTGTGTGAGCAAGGGAGGGTAGGAGCTCTTGCTGATAGCACAGCGGGAGACTCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGGAGCCACAGAGCAGACCACACACACCCTTCAACACTACCTGCCCAGCATGCAACTCCTTTCTGTaGACACACCAGCAGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LREPQSRPHTPFNTTCPACNSFL*THQQPS Trigger: TGAGGGCTGCTGGTGTGTTCACAGAAAGGAGTTGCA...TGCTGGGCAGGTAGTGTTGAAGGGTGTGTGTGGTCTGCTCTGTGGCTCCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR-3UTR GCA 90 bp | GAGGAAGGAGAGATCCTTCTGTGTTCTAGGGACACAGGGTACCATCTTCCCAGGACAGAACACCAGGCCTaGCCACTCACAGGAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: EEGEILLCSRDTGYHLPRTEHQA*PLTGGR Trigger: CCTCCCTCCTGTGAGTGGGCAGGCCTGGTGTTCTGT...CCTGGGAAGATGGTACCCTGTGTCCCTAGAACACAGAAGGATCTCTCCTTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGGAGCCACAGAGCAGACCACACACACCCTTCAACACTACCTGCCCAGCATCCTTCGACTGGCTGTaGTTGGACTCAGTGGGAACT | + |
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Preference number: 2 (lower is better) Translates to: LREPQSRPHTPFNTTCPASFDWL*LDSVGT Trigger: AGTTCCCACTGAGTCCAACCACAGCCAGTCGAAGGA...TGCTGGGCAGGTAGTGTTGAAGGGTGTGTGTGGTCTGCTCTGTGGCTCCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR CAA 90 bp | CCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCACCACAACTGTaGCATGCAACTCCTTTCTGTGAACACACCAGCAGCCCTCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: PVTEGSQDKARAPQL*HATPFCEHTSSPQF Trigger: GAACTGAGGGCTGCTGGTGTGTTCACAGAAAGGAGTTGCATGCAACAGTTGTGGTGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
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| 3UTR-3UTR TCA 90 bp | CTGACCCCGCCATGGGCAGTGAGGGGTTCATGCAGGCTGCTTGCCAGGGTTGGAACATGGAGACTTCTCTaGATTGCCCAAATACATCTC | + |
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Preference number: 2 (lower is better) Translates to: LTPPWAVRGSCRLLARVGTWRLL*IAQIHL Trigger: GAGATGTATTTGGGCAATTCAGAGAAGTCTCCATGT...TCCAACCCTGGCAAGCAGCCTGCATGAACCCCTCACTGCCCATGGCGGGGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR-3UTR CCA 90 bp | GAGTTGGGACCAAAGGCTGGGACCACACCGGAGTATGCAGGCAACACAAATTGGACTGGGGGTGTGCTTTaGGGTTTCAAAAGCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: ELGPKAGTTPEYAGNTNWTGGVL*GFKSPH Trigger: GTGTGGGCTTTTGAAACCCCAAAGCACACCCCCAGT...CCAATTTGTGTTGCCTGCATACTCCGGTGTGGTCCCAGCCTTTGGTCCCAACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTACCCTCCCTTGCTCACACAGACTGATACAGCTAGAGAGGAACCAGCTGCTGATAAACACTTCCTaGCTGTCCTGGAGGAGCATG | + |
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Preference number: 2 (lower is better) Translates to: APTLPCSHRLIQLERNQLLINTS*LSWRSM Trigger: CATGCTCCTCCAGGACAGTCAGGAAGTGTTTATCAG...CAGCTGGTTCCTCTCTAGCTGTATCAGTCTGTGTGAGCAAGGGAGGGTAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGGAACTCCTAATCAGTCAGTGTGCTCAGTATCTCCAACTGCGGTGCCTGATAGAGATAGGTCTGTaGTCAGAACCGCGGTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SGELLISQCAQYLQLRCLIEIGL*SEPRCL Trigger: GAGGCACCGCGGTTCTGAGCACAGACCTATCTCTAT...CAGGCACCGCAGTTGGAGATACTGAGCACACTGACTGATTAGGAGTTCCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTTTCCTCCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCACCACAACGCCCTCAGTTCTAGGTaGGATTCTCTCTATGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LSFLQSQKAPRTRQGHHNALSSR*DSLYVC Trigger: ACACACATAGAGAGAATCCCACCTAGAACTGAGGGC...GTTGTGGTGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGGAGGAAACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
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| 3UTR-3UTR GCA 90 bp | AGTCTCCCGCTGTGCTATCAGCAAGAGCTCCTACCCTCCCTTGCTCACACAGACCACCAGTCTCTCTCTTaGTGTAAAACTCTAGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: SLPLCYQQELLPSLAHTDHQSLS*CKTLGY Trigger: GTAGCCTAGAGTTTTACAGCAAGAGAGAGACTGGTG...GTCTGTGTGAGCAAGGGAGGGTAGGAGCTCTTGCTGATAGCACAGCGGGAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR-3UTR CCA 90 bp | CTGACCCACAAGCTAAAAAGTCCTCAGGGAGACAGCGTGTGTAAGGCCCACTGCCCTGACCTGTTGCCATaGTTACAGTGTCTCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: LTHKLKSPQGDSVCKAHCPDLLP*LQCLFT Trigger: TGTGAAGAGACACTGTAACCATGGCAACAGGTCAGG...GCAGTGGGCCTTACACACGCTGTCTCCCTGAGGACTTTTTAGCTTGTGGGTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR-3UTR CCA 90 bp | CAGAACCGCGGTGCCTCTAAACCTGGTTTTGAAACAGACTCTCGATCCATGAACCTGATCTCAAACTGCTaGCACCCCCAGCTTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: QNRGASKPGFETDSRSMNLISNC*HPQLPE Trigger: CTCAGGAAGCTGGGGGTGCCAGCAGTTTGAGATCAG...GTTCATGGATCGAGAGTCTGTTTCAAAACCAGGTTTAGAGGCACCGCGGTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| 3UTR CAA 90 bp | GATCTAAAGAACCTGAAGCAGAGATTCTCCTTCGACTGGCTGTGGTaGGACTCAGTGGGAACTCCAGATCAGGGTTTACAGCATTCCCGC | + |
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Preference number: 2 (lower is better) Translates to: DLKNLKQRFSFDWLW*DSVGTPDQGLQHSR Trigger: GCGGGAATGCTGTAAACCCTGATCTGGAGTTCCCACTGAGTCCAACCACAGCCAGTCGAAGGAGAATCTCTGCTTCAGGTTCTTTAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR-3UTR GCA 90 bp | GAGGAAGGAGAGATCCTTCTGTGTTCTAGGGACACAGGGTACCATCTTCCCAGGCCTAATCAGTCAGTGTaGTCAGTATCTCCAACTGCG | + |
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Preference number: 2 (lower is better) Translates to: EEGEILLCSRDTGYHLPRPNQSV*SVSPTA Trigger: CGCAGTTGGAGATACTGAGCACACTGACTGATTAGG...CCTGGGAAGATGGTACCCTGTGTCCCTAGAACACAGAAGGATCTCTCCTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGAAGGAGAGATCCTTCTGTGTTCTAGGGACACAGGGTACCATCTTCCCAGGTGTTCCGCTTGTCTTTaGGTTTCCCAAAGTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: EEGEILLCSRDTGYHLPRCSACL*VSQSLC Trigger: ACACAGACTTTGGGAAACTCAAAGACAAGCGGAACA...CCTGGGAAGATGGTACCCTGTGTCCCTAGAACACAGAAGGATCTCTCCTTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCTCCCGCTGTGCTATCAGCAAGAGCTCCTACCCTCCCTTGCTCACACAGACGTACAGGCCCAACAATaGCAAGAAATTTTATCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SLPLCYQQELLPSLAHTDVQAQQ*QEILSE Trigger: TTCTGATAAAATTTCTTGTCATTGTTGGGCCTGTAC...GTCTGTGTGAGCAAGGGAGGGTAGGAGCTCTTGCTGATAGCACAGCGGGAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR-3UTR TCA 90 bp | CCCTTAGGTAATGGGATTATTAATGGTTGTGTTCCGCTTGTCTTTGAGTTTCCCAGAGCGAGCCCAGGCTaGACCTCTGAAGACACAGTA | + |
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Preference number: 2 (lower is better) Translates to: PLGNGIINGCVPLVFEFPRASPG*TSEDTV Trigger: TACTGTGTCTTCAGAGGTTCAGCCTGGGCTCGCTCT...GGGAAACTCAAAGACAAGCGGAACACAACCATTAATAATCCCATTACCTAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGTCATCTTCAATGACCCTATTTATGGGACATTTGTTGACAAGTGGCATCTGCAACTCCTTTCTGTaGACACACCAGCAGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SRSSSMTLFMGHLLTSGICNSFL*THQQPS Trigger: TGAGGGCTGCTGGTGTGTTCACAGAAAGGAGTTGCA...GATGCCACTTGTCAACAAATGTCCCATAAATAGGGTCATTGAAGATGACCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTCTAGGGACACAGGGTACCATCTTCCCAGGAATCTCACAACTGTATGAGAGGATGCTTTTGTTGTaGCTTCATCATCATGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: CVLGTQGTIFPGISQLYERMLLL*LHHHAP Trigger: AGGAGCATGATGATGAAGCCACAACAAAAGCATCCT...CTCATACAGTTGTGAGATTCCTGGGAAGATGGTACCCTGTGTCCCTAGAACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| 3UTR GCA 72 bp | CAAGGGCTGACCCCGCCATGGGCAGTGAGGGGTTCATaGAGGCTGCTTGCCAGGGTTGGAAGCATGATGCTG | + |
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Preference number: 3 (lower is better) Translates to: QGLTPPWAVRGS*RLLARVGSMML Trigger: CAGCATCATGCTTCCAACCCTGGCAAGCAGCCTGCATGAACCCCTCACTGCCCATGGCGGGGTCAGCCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR-3UTR CAA 90 bp | CAAGGGCTGACCCCGCCATGGGCAGTGAGGGGTTCATGCAGGCTGCTTGCCAGGTCTGCACCTGACCTGTaGCCATGGTTACAGTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: QGLTPPWAVRGSCRLLARSAPDL*PWLQCL Trigger: GAGACACTGTAACCATGGCAACAGGTCAGGTGCAGA...CCTGGCAAGCAGCCTGCATGAACCCCTCACTGCCCATGGCGGGGTCAGCCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR GCA 72 bp | CCCGCCATGGGCAGTGAGGGGTTCATGCAGGCTGCTTaGCAGGGTTGGAAGCATGATGCTGGTAGTCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: PAMGSEGFMQAA*QGWKHDAGSLS Trigger: GCTCAGACTACCAGCATCATGCTTCCAACCCTGGCAAGCAGCCTGCATGAACCCCTCACTGCCCATGGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR CCA 72 bp | GGCAGTGAGGGGTTCATGCAGGCTGCTTGCCAGGGTTaGAAGCATGATGCTGGTAGTCTGAGCGCAGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: GSEGFMQAACQG*KHDAGSLSAES Trigger: AGACTCTGCGCTCAGACTACCAGCATCATGCTTCCAACCCTGGCAAGCAGCCTGCATGAACCCCTCACTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR-3UTR CAA 90 bp | CCTCAGGGAGCCACAGAGCAGACCACACACACCCTTCAACACTACCTGCCCAGCAGGGCACCACAACTGTaGCATGCAACTCCTTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: PQGATEQTTHTLQHYLPSRAPQL*HATPFC Trigger: ACAGAAAGGAGTTGCATGCAACAGTTGTGGTGCCCT...GCTGGGCAGGTAGTGTTGAAGGGTGTGTGTGGTCTGCTCTGTGGCTCCCTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR TCA 72 bp | CTGCTTGCCAGGGTTGGAAGCATGATGCTGGTAGTCTaGGCGCAGAGTCTCCCGCTGTGCTATCAGCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LLARVGSMMLVV*AQSLPLCYQQE Trigger: CTCTTGCTGATAGCACAGCGGGAGACTCTGCGCTCAGACTACCAGCATCATGCTTCCAACCCTGGCAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR CCA 72 bp | GGAGACAGCGTGTGTAAGGCCCACTGCTCACACCACTaGTTAGCCACAGAGCTAGGACCAGCAATCTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: GDSVCKAHCSHH*LATELGPAICV Trigger: CACACAGATTGCTGGTCCTAGCTCTGTGGCTAACCAGTGGTGTGAGCAGTGGGCCTTACACACGCTGTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| 3UTR GCA 72 bp | AAGGCTCCCAGGACAAGGCAAGGGCACCACAACTGTTaGATGCAACTCCTTTCTGTGAACACACCAGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: KAPRTRQGHHNC*MQLLSVNTPAA Trigger: GGCTGCTGGTGTGTTCACAGAAAGGAGTTGCATGCAACAGTTGTGGTGCCCTTGCCTTGTCCTGGGAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
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| 3UTR GCA 72 bp | CCCGCTGTGCTATCAGCAAGAGCTCCTACCCTCCCTTaGTCACACAGACTGATACAGCTAGAGAGGAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: PAVLSARAPTLP*SHRLIQLERNQ Trigger: CTGGTTCCTCTCTAGCTGTATCAGTCTGTGTGAGCAAGGGAGGGTAGGAGCTCTTGCTGATAGCACAGCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR GCA 72 bp | AAAAGTCCTCAGGGAGACAGCGTGTGTAAGGCCCACTaGTCACACCACTGGTTAGCCACAGAGCTAGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: KSPQGDSVCKAH*SHHWLATELGP Trigger: TGGTCCTAGCTCTGTGGCTAACCAGTGGTGTGAGCAGTGGGCCTTACACACGCTGTCTCCCTGAGGACTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR CCA 72 bp | AGACTGATACAGCTAGAGAGGAACCAGCTGCAGAGTTaGGACCAAAGGCTGGGACCACACCGGAGTATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLIQLERNQLQS*DQRLGPHRSMQ Trigger: CTGCATACTCCGGTGTGGTCCCAGCCTTTGGTCCCAACTCTGCAGCTGGTTCCTCTCTAGCTGTATCAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR CCA 72 bp | GTGCTGGATCTTGTGGGCACACTATTGGCAGCGAGGTaGGAGAGCCGTGTAGTCTGTGCAAGGCGATCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VLDLVGTLLAAR*ESRVVCARRSK Trigger: TTTAGATCGCCTTGCACAGACTACACGGCTCTCCCACCTCGCTGCCAATAGTGTGCCCACAAGATCCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGGCTGACCCCGCCATGGGCAGTGAGGGGTTCATGCAGGCTGCTTGCCAGGCTATTTATGGGACATTaGTTGACAAGTGGCATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QGLTPPWAVRGSCRLLARLFMGH*LTSGIF Trigger: AAAGATGCCACTTGTCAACAAATGTCCCATAAATAG...CCTGGCAAGCAGCCTGCATGAACCCCTCACTGCCCATGGCGGGGTCAGCCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR GCA 72 bp | TGGGGGCTCACCTTTCAAGGGACAGAGTACAGTTTCTaGACCTGGTCTGAAGCTGGAGGAAGGAGAGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: WGLTFQGTEYSF*TWSEAGGRRDP Trigger: AGGATCTCTCCTTCCTCCAGCTTCAGACCAGGTGCAGAAACTGTACTCTGTCCCTTGAAAGGTGAGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR CCA 72 bp | AACAAGCGCCAAGTCTCTGGGTTTAGTCCTCAGCTCTaGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NKRQVSGFSPQL*RERERERERER Trigger: CCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGAGCTGAGGACTAAACCCAGAGACTTGGCGCTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR TCA 72 bp | AAGGGCACCACAACTGTTGCATGCAACTCCTTTCTGTaGACACACCAGCAGCCCTCAGTTCTAGGTGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: KGTTTVACNSFL*THQQPSVLGGI Trigger: AATCCCACCTAGAACTGAGGGCTGCTGGTGTGTTCACAGAAAGGAGTTGCATGCAACAGTTGTGGTGCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| 3UTR CCA 72 bp | AAAGACAGGGGGTGGGGATTTAGCTCAGTGGTAGAGTaGTTGCCTAACAAGCGCCAAGTCTCTGGGTTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: KDRGWGFSSVVE*LPNKRQVSGFS Trigger: ACTAAACCCAGAGACTTGGCGCTTGTTAGGCAACCACTCTACCACTGAGCTAAATCCCCACCCCCTGTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR CCA 72 bp | CTCACCTTTCAAGGGACAGAGTACAGTTTCTGCACCTaGTCTGAAGCTGGAGGAAGGAGAGATCCTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LTFQGTEYSFCT*SEAGGRRDPSV Trigger: CACAGAAGGATCTCTCCTTCCTCCAGCTTCAGACCAGGTGCAGAAACTGTACTCTGTCCCTTGAAAGGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGGGAACTCCTAATCAGTCAGTGTGCTCAGTATCTCCAACTGCGGTGCCTGCCTCTAAACCTGGTTTaGAAACAGACTCTCGATCCA | + |
|
Preference number: 3 (lower is better) Translates to: SGELLISQCAQYLQLRCLPLNLV*KQTLDP Trigger: TGGATCGAGAGTCTGTTTCAAAACCAGGTTTAGAGG...CAGGCACCGCAGTTGGAGATACTGAGCACACTGACTGATTAGGAGTTCCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR TCA 72 bp | AGCAACGGCAGCAAAGTAAATCTGATAAACACTTCCTaGCTGTCCTGGAGGAGCATGGGGTGGGATGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SNGSKVNLINTS*LSWRSMGWDEE Trigger: TTCCTCATCCCACCCCATGCTCCTCCAGGACAGTCAGGAAGTGTTTATCAGATTTACTTTGCTGCCGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR TCA 72 bp | CCTCTAAACCTGGTTTTGAAACAGACTCTCGATCCATaGACCTTGCTGATCTCAAACTGCTGGCACCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PLNLVLKQTLDP*TLLISNCWHPQ Trigger: CTGGGGGTGCCAGCAGTTTGAGATCAGCAAGGTTCATGGATCGAGAGTCTGTTTCAAAACCAGGTTTAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR TCA 72 bp | GAGAGAGAGAGAGAGAGAGAGAGAGCGAGCCCAGGCTaGACCTCTGAAGACACAGTAAATAGTAAAGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: ERERERERASPG*TSEDTVNSKAC Trigger: GCATGCTTTACTATTTACTGTGTCTTCAGAGGTTCAGCCTGGGCTCGCTCTCTCTCTCTCTCTCTCTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR CCA 72 bp | GATCTAAAGAACCTGAAGCAGAGATTCTCCTTCGACTaGCTGTGGTTGGACTCAGTGGGAACTCCAGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLKNLKQRFSFD*LWLDSVGTPDQ Trigger: CTGATCTGGAGTTCCCACTGAGTCCAACCACAGCCAGTCGAAGGAGAATCTCTGCTTCAGGTTCTTTAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR TCA 72 bp | GAACAATGCGACTGTGAGGACCATGGGGTTGAACACTaGGGAAGCTCCATAGCAAACCTCCAAAAGATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: EQCDCEDHGVEH*GSSIANLQKIE Trigger: CTCTATCTTTTGGAGGTTTGCTATGGAGCTTCCTCAGTGTTCAACCCCATGGTCCTCACAGTCGCATTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR TCA 72 bp | ACAGGGTACCATCTTCCCAGGAATCTCACAACTGTATaGGCAGCAGATCCCCTGAGCCTCATGAAACCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TGYHLPRNLTTV*AADPLSLMKPK Trigger: TTTTGGTTTCATGAGGCTCAGGGGATCTGCTGCTCATACAGTTGTGAGATTCCTGGGAAGATGGTACCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR TCA 72 bp | CTTTCAAGGGACAGAGTACAGTTTCTGCACCTGGTCTaGAGCTGGAGGAAGGAGAGATCCTTCTGTGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LSRDRVQFLHLV*SWRKERSFCVL Trigger: TAGAACACAGAAGGATCTCTCCTTCCTCCAGCTTCAGACCAGGTGCAGAAACTGTACTCTGTCCCTTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR GCA 72 bp | AAGAATCTGCATAGCTTGAAGACACTAGTCATCGCGTaGAGAGAGAAGGAGATGGCAGAGAGGAGAGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KNLHSLKTLVIA*REKEMAERRGE Trigger: TTCTCCTCTCCTCTCTGCCATCTCCTTCTCTCTGCACGCGATGACTAGTGTCTTCAAGCTATGCAGATTCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR GCA 72 bp | GAGTACAGGACTGAGGAGAACTTCAAAGGTCACGAATaGTCACCTCGTTCTGCTGACCCACAAGCTAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: EYRTEENFKGHE*SPRSADPQAKK Trigger: CTTTTTAGCTTGTGGGTCAGCAGAACGAGGTGAGCATTCGTGACCTTTGAAGTTCTCCTCAGTCCTGTACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR GCA 72 bp | CAAAACTCTGTCTGGGGAACTCCTAATCAGTCAGTGTaGTCAGTATCTCCAACTGCGGTGCCTGTAAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: QNSVWGTPNQSV*SVSPTAVPVNK Trigger: CTTGTTTACAGGCACCGCAGTTGGAGATACTGAGCACACTGACTGATTAGGAGTTCCCCAGACAGAGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR CCA 72 bp | CTTTCTGTGAACACACCAGCAGCCCTCAGTTCTAGGTaGGATTCTCTCTATGTGTGTCTTCTACATGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: LSVNTPAALSSR*DSLYVCLLHGS Trigger: GGATCCATGTAGAAGACACACATAGAGAGAATCCCACCTAGAACTGAGGGCTGCTGGTGTGTTCACAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| 3UTR CCA 72 bp | GAAAGCCATGGGCTGAGAAAATCTGTGAAAGAAGCATaGGGGCTCACCTTTCAAGGGACAGAGTACAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ESHGLRKSVKEA*GLTFQGTEYSF Trigger: GAAACTGTACTCTGTCCCTTGAAAGGTGAGCCCCCATGCTTCTTTCACAGATTTTCTCAGCCCATGGCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR TCA 72 bp | CTCCATAGCAAACCTCCAAAAGATAGAGTACAGGACTaGGGAGAACTTCAAAGGTCACGAATGCTCACCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LHSKPPKDRVQD*GELQRSRMLTS Trigger: CGAGGTGAGCATTCGTGACCTTTGAAGTTCTCCTCAGTCCTGTACTCTATCTTTTGGAGGTTTGCTATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR GCA 72 bp | TGTAAAACTCTAGGCTACCTCTCCCAACACCATATCTaGCAGAGTGCCACCATGTTTCCCACCGTAATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CKTLGYLSQHHI*QSATMFPTVMK Trigger: TTTCATTACGGTGGGAAACATGGTGGCACTCTGGCAGATATGGTGTTGGGAGAGGTAGCCTAGAGTTTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR CCA 72 bp | ATGCTCCTCAAGGTAGGCTCCAGAAAAACAAAGGTCTaGCAAAGTAACCTGTCCCACGGAATAGAGATAGGT | + |
|
Preference number: 3 (lower is better) Translates to: MLLKVGSRKTKV*QSNLSHGIEIG Trigger: ACCTATCTCTATTCCGTGGGACAGGTTACTTTGCCAGACCTTTGTTTTTCTGGAGCCTACCTTGAGGAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR CCA 72 bp | TGTTTATCCATTTCTTTAAAAATCCATCTCGTGTGCTaGATCTTGTGGGCACACTATTGGCAGCGAGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CLSISLKIHLVC*ILWAHYWQRGG Trigger: CCCACCTCGCTGCCAATAGTGTGCCCACAAGATCCAGCACACGAGATGGATTTTTAAAGAAATGGATAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR TCA 72 bp | CGTGTCTCAAATAAAACAGAGCACATGGGGTTTCACTaGGGTGGAAGAACAAACTCCTTTAACAAAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RVSNKTEHMGFH*GGRTNSFNKAQ Trigger: CTGGGCTTTGTTAAAGGAGTTTGTTCTTCCACCTCAGTGAAACCCCATGTGCTCTGTTTTATTTGAGACACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR GCA 72 bp | CTGTGTTTATCCATTTCTTTAAAAATCCATCTCGTGTaGTGGATCTTGTGGGCACACTATTGGCAGCGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LCLSISLKIHLV*WILWAHYWQRG Trigger: ACCTCGCTGCCAATAGTGTGCCCACAAGATCCAGCACACGAGATGGATTTTTAAAGAAATGGATAAACACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR CCA 72 bp | AAATATGATGAACAGTTAAGAGAGAAAGACAGGGGGTaGGGATTTAGCTCAGTGGTAGAGTGGTTGCCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: KYDEQLREKDRG*GFSSVVEWLPN Trigger: GTTAGGCAACCACTCTACCACTGAGCTAAATCCCCACCCCCTGTCTTTCTCTCTTAACTGTTCATCATATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCGCTACAAAGGCACTTAAACACCATTGGAAGAGTCCAAACAAAAGACTAGTTAAGAATCTGCATAGCTaGAAGACACTAGTCATCGCG | + |
|
Preference number: 3 (lower is better) Translates to: PATKALKHHWKSPNKRLVKNLHS*KTLVIA Trigger: CGCGATGACTAGTGTCTTCAAGCTATGCAGATTCTT...AACTAGTCTTTTGTTTGGACTCTTCCAATGGTGTTTAAGTGCCTTTGTAGCGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTAGGTAATGGGATTATTAATGGTTGTGTTCCGCTTGTCTTTGAGTTTCCCGCCTGTGTGAGAACCTaGGCCAATTTTTCAAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: PLGNGIINGCVPLVFEFPACVRT*ANFSRI Trigger: AATTCTTGAAAAATTGGCCAAGGTTCTCACACAGGC...GGGAAACTCAAAGACAAGCGGAACACAACCATTAATAATCCCATTACCTAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR CCA 72 bp | CTTAGAAGAACCGTGTCTCAAATAAAACAGAGCACATaGGGTTTCACTGAGGTGGAAGAACAAACTCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LRRTVSQIKQST*GFTEVEEQTPL Trigger: TAAAGGAGTTTGTTCTTCCACCTCAGTGAAACCCCATGTGCTCTGTTTTATTTGAGACACGGTTCTTCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGTGACCTAGCTCTTGTTCCACTGTGTTTATCCATTTCTTTAAAAATCCATTCCAGAGGTGTAGATTaGTTGGGGGAAGTATGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LCDLALVPLCLSISLKIHSRGVD*LGEVCH Trigger: GTGACATACTTCCCCCAACAAATCTACACCTCTGGA...ATGGATTTTTAAAGAAATGGATAAACACAGTGGAACAAGAGCTAGGTCACACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAAGCACTTGTAATTAACTGTCATGGGATTTTCCTCCTACTCCACAAGTGGGGTGCAATTGAGTTCTaGAAAACAGATCTGAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: FKALVINCHGIFLLLHKWGAIEF*KTDLRD Trigger: ATCCCTCAGATCTGTTTTCAAGAACTCAATTGCACC...CCACTTGTGGAGTAGGAGGAAAATCCCATGACAGTTAATTACAAGTGCTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR CCA 72 bp | CAACAGAAAATATTTGTTGTGGGAAATGGTTCGTGCTaGTATTTTTCCAAATGTAAAGCTAAGCTCAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: QQKIFVVGNGSC*YFSKCKAKLRS Trigger: GGATCTGAGCTTAGCTTTACATTTGGAAAAATACCAGCACGAACCATTTCCCACAACAAATATTTTCTGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGAATGCAGTTCTAATAGCTAATGGCTATTTTTCTGGTGTAGTTCCTACCTGTCTATTTATGGGACATTaGTTGACAAGTGGCATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: MNAVLIANGYFSGVVPTCLFMGH*LTSGIF Trigger: AAAGATGCCACTTGTCAACAAATGTCCCATAAATAG...ACAGGTAGGAACTACACCAGAAAAATAGCCATTAGCTATTAGAACTGCATTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| 3UTR TCA 72 bp | TTGAAAACAGATCTGAGGGATTATGATGAACAGCGCTaGATCTGTAACTGCTTGTTTTTAGTCATTATACTT | + |
|
Preference number: 3 (lower is better) Translates to: LKTDLRDYDEQR*ICNCLFLVIIL Trigger: AAGTATAATGACTAAAAACAAGCAGTTACAGATTCAGCGCTGTTCATCATAATCCCTCAGATCTGTTTTCAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR GCA 72 bp | ATTCAACAGAAAATATTTGTTGTGGGAAATGGTTCGTaGTGGTATTTTTCCAAATGTAAAGCTAAGCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: IQQKIFVVGNGS*WYFSKCKAKLR Trigger: TCTGAGCTTAGCTTTACATTTGGAAAAATACCAGCACGAACCATTTCCCACAACAAATATTTTCTGTTGAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| CDS-3UTR CCA 90 bp | GCTGGCACCCCCAGCTTCCTGAGTAGCCAGGATCCCAGGATCGAATCACTCAGCCAGGGGGCCATGGGATaGTACGTTGAGGAAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGTPSFLSSQDPRIESLSQGAMG*YVEEDL Trigger: CAGATCTTCCTCAACGTACCATCCCATGGCCCCCTG...GCTGAGTGATTCGATCCTGGGATCCTGGCTACTCAGGAAGCTGGGGGTGCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGTTTCCTCCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCACCACAACAGTCACCCAGGAACCTaGGAGAGTGGCACTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQSQKAPRTRQGHHNSHPGT*ESGTES Trigger: GCTCTCAGTGCCACTCTCTCAGGTTCCTGGGTGACT...GTTGTGGTGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGGAGGAAACTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR TCA 90 bp | CTCAGTTTCCTCCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCACCACAACTTCATGTTCAGCCACTaGGCTGAGTCCCGCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQSQKAPRTRQGHHNFMFSH*AESRSG Trigger: GCCACTGCGGGACTCAGCTCAGTGGCTGAACATGAA...GTTGTGGTGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGGAGGAAACTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR TCA 90 bp | CTGACCCCGCCATGGGCAGTGAGGGGTTCATGCAGGCTGCTTGCCAGGGTTGGACTTGGAACAAATGTCTaGGGAGTGCGTCTTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTPPWAVRGSCRLLARVGLGTNV*GVRLHV Trigger: AACATGAAGACGCACTCCTCAGACATTTGTTCCAAG...TCCAACCCTGGCAAGCAGCCTGCATGAACCCCTCACTGCCCATGGCGGGGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| CDS-3UTR CCA 90 bp | CTCAGTTTCCTCCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCACCACAACCAGGGGGCCATGGGATaGTACGTTGAGGAAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQSQKAPRTRQGHHNQGAMG*YVEEDL Trigger: CAGATCTTCCTCAACGTACCATCCCATGGCCCCCTG...GTTGTGGTGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGGAGGAAACTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR GCA 90 bp | TTTCTCAGTTTCCTCCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCACCACCCCTGGGGTCCTTCATaGAAAGCCATCTCGGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLSFLQSQKAPRTRQGHHPWGPS*KAISGV Trigger: AACTCCCGAGATGGCTTTGCATGAAGGACCCCAGGG...GTGGTGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGGAGGAAACTGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| 3UTR CAA 72 bp | GAAGGCTCCCAGGACAAGGCAAGGGCACCACAACTGTaGCATGCAACTCCTTTCTGTGAACACACCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGSQDKARAPQL*HATPFCEHTSS Trigger: GCTGCTGGTGTGTTCACAGAAAGGAGTTGCATGCAACAGTTGTGGTGCCCTTGCCTTGTCCTGGGAGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| 3UTR CAA 72 bp | AATCCATCTCGTGTGCTGGATCTTGTGGGCACACTATaGGCAGCGAGGTGGGAGAGCCGTGTAGTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NPSRVLDLVGTL*AARWESRVVCA Trigger: TGCACAGACTACACGGCTCTCCCACCTCGCTGCCAATAGTGTGCCCACAAGATCCAGCACACGAGATGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGGAGCAGCAGGTCCAGGAAATAGAAAGCCATGGGCTGAGAAAATCTGTAGTCACCCAGGAACCTaGGAGAGTGGCACTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPGAAGPGNRKPWAEKICSHPGT*ESGTES Trigger: GCTCTCAGTGCCACTCTCTCAGGTTCCTGGGTGACT...ACAGATTTTCTCAGCCCATGGCTTTCTATTTCCTGGACCTGCTGCTCCAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTCAGTTTCCTCCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCACCACCAATGGCCTTGGTCATaGGAGAGCCCTCAAAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSFLQSQKAPRTRQGHHQWPWS*ESPQNV Trigger: GACGTTTTGAGGGCTCTCTCATGACCAAGGCCATTG...GTGGTGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGGAGGAAACTGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR TCA 90 bp | CTCAGTTTCCTCCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCACCACAACATGCGGTCAAGAACCTaGGCCACGAATTTCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQSQKAPRTRQGHHNMRSRT*ATNFQS Trigger: AGACTGGAAATTCGTGGCTCAGGTTCTTGACCGCAT...GTTGTGGTGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGGAGGAAACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR GCA 90 bp | CGTTTTCTCAGTTTCCTCCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCACAGAGCCAGAGGAAGATaGGGTCAAGAACCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RFLSFLQSQKAPRTRQGHRARGR*GQEPEP Trigger: TGGCTCAGGTTCTTGACCGCATCTTCCTCTGGCTCT...GTGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGGAGGAAACTGAGAAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR CCA 90 bp | AAGGCAAGGGCACCACAACTGTTGCATGCAACTCCTTTCTGTGAACACACCAGCTCACCCAGGGGGCCATaGGATGGTACGTTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KARAPQLLHATPFCEHTSSPRGP*DGTLRK Trigger: CTTCCTCAACGTACCATCCCATGGCCCCCTGGGTGA...GCTGGTGTGTTCACAGAAAGGAGTTGCATGCAACAGTTGTGGTGCCCTTGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| 3UTR CAA 72 bp | GACAGGGGGTGGGGATTTAGCTCAGTGGTAGAGTGGTaGCCTAACAAGCGCCAAGTCTCTGGGTTTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRGWGFSSVVEW*PNKRQVSGFSP Trigger: AGGACTAAACCCAGAGACTTGGCGCTTGTTAGGCAACCACTCTACCACTGAGCTAAATCCCCACCCCCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAGGACTTAGTAAAGGTGGAACAGAACACCAGGCCTGCCCACTCACAGGAAGAACACCAGGACCGTaGGAAAAGACAGCCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQGLSKGGTEHQACPLTGRTPGP*EKTAPG Trigger: GCCTGGGGCTGTCTTTTCTCACGGTCCTGGTGTTCT...TCCTGTGAGTGGGCAGGCCTGGTGTTCTGTTCCACCTTTACTAAGTCCTTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTGGGACCAAAGGCTGGGACCACACCGGAGTATGCAGGCAACACAAATTGGATGCGGTCAAGAACCTaGGCCACGAATTTCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELGPKAGTTPEYAGNTNWMRSRT*ATNFQS Trigger: AGACTGGAAATTCGTGGCTCAGGTTCTTGACCGCAT...CCAATTTGTGTTGCCTGCATACTCCGGTGTGGTCCCAGCCTTTGGTCCCAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| CDS-3UTR TCA 90 bp | AACACACCAGCAGCCCTCAGTTCTAGGTGGGATTCTCTCTATGTGTGTCTTCTAAGTCACCCAGGAACCTaGGAGAGTGGCACTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTPAALSSRWDSLYVCLLSHPGT*ESGTES Trigger: GCTCTCAGTGCCACTCTCTCAGGTTCCTGGGTGACT...TAGAAGACACACATAGAGAGAATCCCACCTAGAACTGAGGGCTGCTGGTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR TCA 90 bp | AACACACCAGCAGCCCTCAGTTCTAGGTGGGATTCTCTCTATGTGTGTCTTCTATTCATGTTCAGCCACTaGGCTGAGTCCCGCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTPAALSSRWDSLYVCLLFMFSH*AESRSG Trigger: GCCACTGCGGGACTCAGCTCAGTGGCTGAACATGAA...TAGAAGACACACATAGAGAGAATCCCACCTAGAACTGAGGGCTGCTGGTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR TCA 90 bp | CCACAACTGTTGCATGCAACTCCTTTCTGTGAACACACCAGCAGCCCTCAGTTCCAATGGCCTTGGTCATaGGAGAGCCCTCAAAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQLLHATPFCEHTSSPQFQWPWS*ESPQNV Trigger: GACGTTTTGAGGGCTCTCTCATGACCAAGGCCATTG...GAACTGAGGGCTGCTGGTGTGTTCACAGAAAGGAGTTGCATGCAACAGTTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR TCA 90 bp | ACCATCACACTAGCTCAAACCCACGTTTTCTCAGTTTCCTCCAGTCACAGAAGGAGAACACCAGGACCGTaGGAAAAGACAGCCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TITLAQTHVFSVSSSHRRRTPGP*EKTAPG Trigger: GCCTGGGGCTGTCTTTTCTCACGGTCCTGGTGTTCT...CCTTCTGTGACTGGAGGAAACTGAGAAAACGTGGGTTTGAGCTAGTGTGATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR GCA 90 bp | AAGGCAAGGGCACCACAACTGTTGCATGCAACTCCTTTCTGTGAACACACCAGCAGAGCCAGAGGAAGATaGGGTCAAGAACCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KARAPQLLHATPFCEHTSRARGR*GQEPEP Trigger: TGGCTCAGGTTCTTGACCGCATCTTCCTCTGGCTCT...GCTGGTGTGTTCACAGAAAGGAGTTGCATGCAACAGTTGTGGTGCCCTTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR CCA 90 bp | ACCATCACACTAGCTCAAACCCACGTTTTCTCAGTTTCCTCCAGTCACAGAAGGTCACCCAGGGGGCCATaGGATGGTACGTTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TITLAQTHVFSVSSSHRRSPRGP*DGTLRK Trigger: CTTCCTCAACGTACCATCCCATGGCCCCCTGGGTGA...CCTTCTGTGACTGGAGGAAACTGAGAAAACGTGGGTTTGAGCTAGTGTGATGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR TCA 90 bp | AAACAAGGACTTAGTAAAGGTGGAACAGAACACCAGGCCTGCCCACTCACAGGACAATGGCCTTGGTCATaGGAGAGCCCTCAAAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQGLSKGGTEHQACPLTGQWPWS*ESPQNV Trigger: GACGTTTTGAGGGCTCTCTCATGACCAAGGCCATTG...TCCTGTGAGTGGGCAGGCCTGGTGTTCTGTTCCACCTTTACTAAGTCCTTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR TCA 90 bp | ACACACCAGCAGCCCTCAGTTCTAGGTGGGATTCTCTCTATGTGTGTCTTCTACCATGGGATGGTACGTTaGGGAAGATCTGTGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: THQQPSVLGGILSMCVFYHGMVR*GRSVVD Trigger: GTCCACCACAGATCTTCCTCAACGTACCATCCCATG...GTAGAAGACACACATAGAGAGAATCCCACCTAGAACTGAGGGCTGCTGGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR GCA 90 bp | ACCATCACACTAGCTCAAACCCACGTTTTCTCAGTTTCCTCCAGTCACAGAAGGCCCTGGGGTCCTTCATaGAAAGCCATCTCGGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TITLAQTHVFSVSSSHRRPWGPS*KAISGV Trigger: AACTCCCGAGATGGCTTTGCATGAAGGACCCCAGGG...CCTTCTGTGACTGGAGGAAACTGAGAAAACGTGGGTTTGAGCTAGTGTGATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR GCA 90 bp | CTCAGTTTCCTCCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCACCACAACTCACTGGTAGGAGTCTaGTTCTTTTTCCCTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQSQKAPRTRQGHHNSLVGV*FFFPGN Trigger: ATTTCCAGGGAAAAAGAAGCAGACTCCTACCAGTGA...GTTGTGGTGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGGAGGAAACTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR CCA 90 bp | GGTTTTGAAACAGACTCTCGATCCATGAACCTTGCTGATCTCAAACTGCTGGCATCACCCAGGGGGCCATaGGATGGTACGTTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GFETDSRSMNLADLKLLASPRGP*DGTLRK Trigger: CTTCCTCAACGTACCATCCCATGGCCCCCTGGGTGA...TGCCAGCAGTTTGAGATCAGCAAGGTTCATGGATCGAGAGTCTGTTTCAAAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGAACTCCTAATCAGTCAGTGTGCTCAGTATCTCCAACTGCGGTGCCTGCTGCTTCTTTTTCCCTaGAAATTTCCCCCTCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGELLISQCAQYLQLRCLLLLFP*KFPPHG Trigger: ACCGTGAGGGGGAAATTTCCAGGGAAAAAGAAGCAG...CAGGCACCGCAGTTGGAGATACTGAGCACACTGACTGATTAGGAGTTCCCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR TCA 90 bp | CATTTGTTGACAAGTGGCATCTTTGACCTGTGTGGCAAGAGTTGTACCTGTGTAAGAACACCAGGACCGTaGGAAAAGACAGCCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLLTSGIFDLCGKSCTCVRTPGP*EKTAPG Trigger: GCCTGGGGCTGTCTTTTCTCACGGTCCTGGTGTTCT...TACACAGGTACAACTCTTGCCACACAGGTCAAAGATGCCACTTGTCAACAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| 3UTR CAA 72 bp | TCCATTTCTTTAAAAATCCATCTCGTGTGCTGGATCTaGTGGGCACACTATTGGCAGCGAGGTGGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SISLKIHLVCWI*WAHYWQRGGRA Trigger: GGCTCTCCCACCTCGCTGCCAATAGTGTGCCCACAAGATCCAGCACACGAGATGGATTTTTAAAGAAATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| CDS-3UTR TCA 90 bp | AGTCTCCCGCTGTGCTATCAGCAAGAGCTCCTACCCTCCCTTGCTCACACAGACTTTGTTGTCATCAGCTaGTTCTTTTCATCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLCYQQELLPSLAHTDFVVIS*FFSSTS Trigger: AGATGTGGATGAAAAGAATCAGCTGATGACAACAAA...GTCTGTGTGAGCAAGGGAGGGTAGGAGCTCTTGCTGATAGCACAGCGGGAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| CDS-3UTR TCA 90 bp | GGTTTTGAAACAGACTCTCGATCCATGAACCTTGCTGATCTCAAACTGCTGGCACATGGGATGGTACGTTaGGGAAGATCTGTGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GFETDSRSMNLADLKLLAHGMVR*GRSVVD Trigger: GTCCACCACAGATCTTCCTCAACGTACCATCCCATG...TGCCAGCAGTTTGAGATCAGCAAGGTTCATGGATCGAGAGTCTGTTTCAAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR GCA 90 bp | CACAGGAGGGAGGCGTCACGCTGTCCTAAGGTTCCCAAGTCTAGAAACAAAACCTCACTGGTAGGAGTCTaGTTCTTTTTCCCTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HRREASRCPKVPKSRNKTSLVGV*FFFPGN Trigger: ATTTCCAGGGAAAAAGAAGCAGACTCCTACCAGTGA...GGTTTTGTTTCTAGACTTGGGAACCTTAGGACAGCGTGACGCCTCCCTCCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR CCA 90 bp | CATTTGTTGACAAGTGGCATCTTTGACCTGTGTGGCAAGAGTTGTACCTGTGTACAGGGGGCCATGGGATaGTACGTTGAGGAAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLLTSGIFDLCGKSCTCVQGAMG*YVEEDL Trigger: CAGATCTTCCTCAACGTACCATCCCATGGCCCCCTG...TACACAGGTACAACTCTTGCCACACAGGTCAAAGATGCCACTTGTCAACAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR TCA 90 bp | AGCTCAGTGGTAGAGTGGTTGCCTAACAAGCGCCAAGTCTCTGGGTTTAGTCCTGAGAGGGATGACTTTTaGAGAAGACGGGATTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSVVEWLPNKRQVSGFSPERDDF*RRRDYF Trigger: GAAATAATCCCGTCTTCTTCAAAAGTCATCCCTCTC...AGGACTAAACCCAGAGACTTGGCGCTTGTTAGGCAACCACTCTACCACTGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR GCA 90 bp | CGTTTTCTCAGTTTCCTCCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCACTTCATTGAGCAGTTCTaGTTATCGAACGGGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RFLSFLQSQKAPRTRQGHFIEQF*LSNGKN Trigger: ATTTTTCCCGTTCGATAAGCAGAACTGCTCAATGAA...GTGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGGAGGAAACTGAGAAAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR GCA 90 bp | GAGGAAGGAGAGATCCTTCTGTGTTCTAGGGACACAGGGTACCATCTTCCCAGGTTCATTGAGCAGTTCTaGTTATCGAACGGGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EEGEILLCSRDTGYHLPRFIEQF*LSNGKN Trigger: ATTTTTCCCGTTCGATAAGCAGAACTGCTCAATGAA...CCTGGGAAGATGGTACCCTGTGTCCCTAGAACACAGAAGGATCTCTCCTTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR CCA 90 bp | CCACAACTGTTGCATGCAACTCCTTTCTGTGAACACACCAGCAGCCCTCAGTTCCCACATCTTCAAGGCTaGAATAAAAATCAGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQLLHATPFCEHTSSPQFPHLQG*NKNQDR Trigger: TCTGTCCTGATTTTTATTCCAGCCTTGAAGATGTGG...GAACTGAGGGCTGCTGGTGTGTTCACAGAAAGGAGTTGCATGCAACAGTTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR CCA 90 bp | ACGTTTTCTCAGTTTCCTCCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCATTCCATCGTAATTTTTaGTCTGTCCATTCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: TFSQFPPVTEGSQDKARAFHRNF*SVHSTS Trigger: AGATGTGGAATGGACAGACCAAAAATTACGATGGAA...TGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGGAGGAAACTGAGAAAACGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079463.12 |
||
| CDS-3UTR TCA 90 bp | ACCATCACACTAGCTCAAACCCACGTTTTCTCAGTTTCCTCCAGTCACAGAAGGGAGAGGGATGACTTTTaGAGAAGACGGGATTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TITLAQTHVFSVSSSHRRERDDF*RRRDYF Trigger: GAAATAATCCCGTCTTCTTCAAAAGTCATCCCTCTC...CCTTCTGTGACTGGAGGAAACTGAGAAAACGTGGGTTTGAGCTAGTGTGATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR TCA 90 bp | GTGTTTATCCATTTCTTTAAAAATCCATCTCGTGTGCTGGATCTTGTGGGCACACATGGGATGGTACGTTaGGGAAGATCTGTGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VFIHFFKNPSRVLDLVGTHGMVR*GRSVVD Trigger: GTCCACCACAGATCTTCCTCAACGTACCATCCCATG...TGTGCCCACAAGATCCAGCACACGAGATGGATTTTTAAAGAAATGGATAAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| CDS-3UTR TCA 90 bp | CATTTGTTGACAAGTGGCATCTTTGACCTGTGTGGCAAGAGTTGTACCTGTGTAGAGAGGGATGACTTTTaGAGAAGACGGGATTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLLTSGIFDLCGKSCTCVERDDF*RRRDYF Trigger: GAAATAATCCCGTCTTCTTCAAAAGTCATCCCTCTC...TACACAGGTACAACTCTTGCCACACAGGTCAAAGATGCCACTTGTCAACAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| 3UTR CAA 72 bp | AGGTCATCTTCAATGACCCTATTTATGGGACATTTGTaGACAAGTGGCATCTTTGACCTGTGTGGCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSSSMTLFMGHL*TSGIFDLCGKS Trigger: ACTCTTGCCACACAGGTCAAAGATGCCACTTGTCAACAAATGTCCCATAAATAGGGTCATTGAAGATGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR TCA 90 bp | TCAAGGTCATCTTCAATGACCCTATTTATGGGACATTTGTTGACAAGTGGCATCCTTGGAACAAATGTCTaGGGAGTGCGTCTTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRSSSMTLFMGHLLTSGILGTNV*GVRLHV Trigger: AACATGAAGACGCACTCCTCAGACATTTGTTCCAAG...GATGCCACTTGTCAACAAATGTCCCATAAATAGGGTCATTGAAGATGACCTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGTAATTCCTGAAACTGTTGTCAAAACGTGTTCAACCACACTGCTAGAGTCACTGGTAGGAGTCTaGTTCTTTTTCCCTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TCVIPETVVKTCSTTLLESLVGV*FFFPGN Trigger: ATTTCCAGGGAAAAAGAAGCAGACTCCTACCAGTGA...CTCTAGCAGTGTGGTTGAACACGTTTTGACAACAGTTTCAGGAATTACACAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR CCA 90 bp | TTCAAGGTCATCTTCAATGACCCTATTTATGGGACATTTGTTGACAAGTGGCATCTGCTTCTTTTTCCCTaGAAATTTCCCCCTCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKVIFNDPIYGTFVDKWHLLLFP*KFPPHG Trigger: ACCGTGAGGGGGAAATTTCCAGGGAAAAAGAAGCAG...ATGCCACTTGTCAACAAATGTCCCATAAATAGGGTCATTGAAGATGACCTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR GCA 90 bp | CATTTGTTGACAAGTGGCATCTTTGACCTGTGTGGCAAGAGTTGTACCTGTGTATTCATTGAGCAGTTCTaGTTATCGAACGGGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLLTSGIFDLCGKSCTCVFIEQF*LSNGKN Trigger: ATTTTTCCCGTTCGATAAGCAGAACTGCTCAATGAA...TACACAGGTACAACTCTTGCCACACAGGTCAAAGATGCCACTTGTCAACAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS-3UTR CCA 90 bp | CCCACACAACAACATGACATGGAGACTTCTCTGAATTGCCCAAATACATCTCTATTCCATCGTAATTTTTaGTCTGTCCATTCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTQQHDMETSLNCPNTSLFHRNF*SVHSCF Trigger: GAAGCAGGAATGGACAGACCAAAAATTACGATGGAA...TAGAGATGTATTTGGGCAATTCAGAGAAGTCTCCATGTCATGTTGTTGTGTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
||
| CDS-3UTR TCA 90 bp | AATGTCTTTAAAGCACTTGTAATTAACTGTCATGGGATTTTCCTCCTACTCCACCTTGGAACAAATGTCTaGGGAGTGCGTCTTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: NVFKALVINCHGIFLLLHLGTNV*GVRLHV Trigger: AACATGAAGACGCACTCCTCAGACATTTGTTCCAAG...GTGGAGTAGGAGGAAAATCCCATGACAGTTAATTACAAGTGCTTTAAAGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAAGCACTTGTAATTAACTGTCATGGGATTTTCCTCCTACTCCACAAGTGGTTCCATCGTAATTTTTaGTCTGTCCATTCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FKALVINCHGIFLLLHKWFHRNF*SVHSCF Trigger: GAAGCAGGAATGGACAGACCAAAAATTACGATGGAA...CCACTTGTGGAGTAGGAGGAAAATCCCATGACAGTTAATTACAAGTGCTTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| 3UTR CAA 72 bp | GTAATGGGATTATTAATGGTTGTGTTCCGCTTGTCTTaGAGTTTCCCAAAGTCTGTGTCCTGGTCATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VMGLLMVVFRLS*SFPKSVSWSYF Trigger: AAAATATGACCAGGACACAGACTTTGGGAAACTCAAAGACAAGCGGAACACAACCATTAATAATCCCATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAAGCACTTGTAATTAACTGTCATGGGATTTTCCTCCTACTCCACAAGTGGTTTGTTGTCATCAGCTaGTTCTTTTCATCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: FKALVINCHGIFLLLHKWFVVIS*FFSSTS Trigger: AGATGTGGATGAAAAGAATCAGCTGATGACAACAAA...CCACTTGTGGAGTAGGAGGAAAATCCCATGACAGTTAATTACAAGTGCTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGTTTCCTCCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCACCACAACCCATGGGATGGTACGTaGAGGAAGATCTGTGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSFLQSQKAPRTRQGHHNPWDGT*RKICGG Trigger: TCCACCACAGATCTTCCTCAACGTACCATCCCATGG...GTTGTGGTGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGGAGGAAACTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
||
| CDS CCA 90 bp | CGGTTCCCTTACTCTCCGTTCCATCGGGGAAAGAGAAGCGGTCCCTaGGGTCCTTCATGCAAAGCCATCTCGGGAGTTTTTCCAGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: RFPYSPFHRGKRSGP*GPSCKAISGVFPET Trigger: TGTTTCTGGAAAAACTCCCGAGATGGCTTTGCATGAAGGACCCCAGGGACCGCTTCTCTTTCCCCGATGGAACGGAGAGTAAGGGAACCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
||
| CDS CCA 90 bp | CCGTCTGCTGTAACGCACACCTCCTTCAGTTACAGTCTTCCCACCTaGCAGAACACTCACCTGACTGATGAAGTGTTCCTTCTTCACATG | + |
|
Preference number: 5 (lower is better) Translates to: PSAVTHTSFSYSLPT*QNTHLTDEVFLLHM Trigger: CATGTGAAGAAGGAACACTTCATCAGTCAGGTGAGTGTTCTGCCAGGTGGGAAGACTGTAACTGAAGGAGGTGTGCGTTACAGCAGACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGTTTCCTCCAGTCACAGAAGGCTCCCAGGACAAGGCAAGGGCACCACAACTCAGCCACACGTTTGTaGTCATCAGCTGATTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSFLQSQKAPRTRQGHHNSATRL*SSADSF Trigger: AAAAGAATCAGCTGATGACAACAAACGTGTGGCTGA...GTTGTGGTGCCCTTGCCTTGTCCTGGGAGCCTTCTGTGACTGGAGGAAACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| CDS-3UTR CAA 90 bp | AAACAAGGACTTAGTAAAGGTGGAACAGAACACCAGGCCTGCCCACTCACAGGACCATGGGATGGTACGTaGAGGAAGATCTGTGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: KQGLSKGGTEHQACPLTGPWDGT*RKICGG Trigger: TCCACCACAGATCTTCCTCAACGTACCATCCCATGG...TCCTGTGAGTGGGCAGGCCTGGTGTTCTGTTCCACCTTTACTAAGTCCTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| CDS GCA 90 bp | TCCAGGAAAGCGACCAGAACTCTTTCTCCATCACTGGTAGGAGTCTaGTTCTTTTTCCCTGGAAATTTCCCCCTCACGGTTCCCTTACTC | + |
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Preference number: 5 (lower is better) Translates to: SRKATRTLSPSLVGV*FFFPGNFPLTVPLL Trigger: GAGTAAGGGAACCGTGAGGGGGAAATTTCCAGGGAAAAAGAAGCAGACTCCTACCAGTGATGGAGAAAGAGTTCTGGTCGCTTTCCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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| CDS-3UTR CAA 90 bp | CCACAACTGTTGCATGCAACTCCTTTCTGTGAACACACCAGCAGCCCTCAGTTCCGGTCAACGTTTTCATaGATCAGAATGAGGTCGACC | + |
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Preference number: 5 (lower is better) Translates to: PQLLHATPFCEHTSSPQFRSTFS*IRMRST Trigger: GGTCGACCTCATTCTGATCAATGAAAACGTTGACCG...GAACTGAGGGCTGCTGGTGTGTTCACAGAAAGGAGTTGCATGCAACAGTTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
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| CDS-3UTR CAA 90 bp | CCACAACTGTTGCATGCAACTCCTTTCTGTGAACACACCAGCAGCCCTCAGTTCTGCCCTTCATCCCCTTaGCATTTAGTATCTCCCACT | + |
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Preference number: 5 (lower is better) Translates to: PQLLHATPFCEHTSSPQFCPSSP*HLVSPT Trigger: AGTGGGAGATACTAAATGCAAAGGGGATGAAGGGCA...GAACTGAGGGCTGCTGGTGTGTTCACAGAAAGGAGTTGCATGCAACAGTTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
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| CDS-3UTR CAA 90 bp | CAGCCTGGAGCAGCAGGTCCAGGAAATAGAAAGCCATGGGCTGAGAAAATCTGTTGCCCTTCATCCCCTTaGCATTTAGTATCTCCCACT | + |
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Preference number: 5 (lower is better) Translates to: QPGAAGPGNRKPWAEKICCPSSP*HLVSPT Trigger: AGTGGGAGATACTAAATGCAAAGGGGATGAAGGGCA...ACAGATTTTCTCAGCCCATGGCTTTCTATTTCCTGGACCTGCTGCTCCAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| CDS-3UTR CAA 90 bp | AACACACCAGCAGCCCTCAGTTCTAGGTGGGATTCTCTCTATGTGTGTCTTCTACCATGGGATGGTACGTaGAGGAAGATCTGTGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: NTPAALSSRWDSLYVCLLPWDGT*RKICGG Trigger: TCCACCACAGATCTTCCTCAACGTACCATCCCATGG...TAGAAGACACACATAGAGAGAATCCCACCTAGAACTGAGGGCTGCTGGTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
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| CDS TCA 90 bp | ACACCTCCTTCAGTTACAGTCTTCCCACCTGGCAGAACACTCACCTaGCTGATGAAGTGTTCCTTCTTCACATGCCTCGAGATGTATCTG | + |
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Preference number: 5 (lower is better) Translates to: TPPSVTVFPPGRTLT*LMKCSFFTCLEMYL Trigger: CAGATACATCTCGAGGCATGTGAAGAAGGAACACTTCATCAGTCAGGTGAGTGTTCTGCCAGGTGGGAAGACTGTAACTGAAGGAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| CDS TCA 90 bp | TTCCAGAAACAGCCTCTTCACCCAGGGGGCCATGGGATGGTACGTTaGGGAAGATCTGTGGTGGACATTAATTACAAAAACCGTGACAAT | + |
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Preference number: 5 (lower is better) Translates to: FQKQPLHPGGHGMVR*GRSVVDINYKNRDN Trigger: ATTGTCACGGTTTTTGTAATTAATGTCCACCACAGATCTTCCTCAACGTACCATCCCATGGCCCCCTGGGTGAAGAGGCTGTTTCTGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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| CDS CCA 90 bp | CTCTTCACCCAGGGGGCCATGGGATGGTACGTTGAGGAAGATCTGTaGTGGACATTAATTACAAAAACCGTGACAATAATAGACAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: LFTQGAMGWYVEEDL*WTLITKTVTIIDSV Trigger: CACGCTGTCTATTATTGTCACGGTTTTTGTAATTAATGTCCACCACAGATCTTCCTCAACGTACCATCCCATGGCCCCCTGGGTGAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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| CDS-3UTR CAA 90 bp | CAGCCTGGAGCAGCAGGTCCAGGAAATAGAAAGCCATGGGCTGAGAAAATCTGTTCAGCCACACGTTTGTaGTCATCAGCTGATTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: QPGAAGPGNRKPWAEKICSATRL*SSADSF Trigger: AAAAGAATCAGCTGATGACAACAAACGTGTGGCTGA...ACAGATTTTCTCAGCCCATGGCTTTCTATTTCCTGGACCTGCTGCTCCAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| CDS CCA 90 bp | TTCACCCAGGGGGCCATGGGATGGTACGTTGAGGAAGATCTGTGGTaGACATTAATTACAAAAACCGTGACAATAATAGACAGCGTGACA | + |
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Preference number: 5 (lower is better) Translates to: FTQGAMGWYVEEDLW*TLITKTVTIIDSVT Trigger: TGTCACGCTGTCTATTATTGTCACGGTTTTTGTAATTAATGTCCACCACAGATCTTCCTCAACGTACCATCCCATGGCCCCCTGGGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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| CDS-3UTR CAA 90 bp | GTGTTTATCCATTTCTTTAAAAATCCATCTCGTGTGCTGGATCTTGTGGGCACAGCTTCAGCCACACGTTaGTTGTCATCAGCTGATTCT | + |
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Preference number: 5 (lower is better) Translates to: VFIHFFKNPSRVLDLVGTASATR*LSSADS Trigger: AGAATCAGCTGATGACAACAAACGTGTGGCTGAAGC...TGTGCCCACAAGATCCAGCACACGAGATGGATTTTTAAAGAAATGGATAAACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060943.5 |
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| CDS-3UTR CAA 90 bp | TCAAGGTCATCTTCAATGACCCTATTTATGGGACATTTGTTGACAAGTGGCATCTGCCCTTCATCCCCTTaGCATTTAGTATCTCCCACT | + |
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Preference number: 5 (lower is better) Translates to: SRSSSMTLFMGHLLTSGICPSSP*HLVSPT Trigger: AGTGGGAGATACTAAATGCAAAGGGGATGAAGGGCA...GATGCCACTTGTCAACAAATGTCCCATAAATAGGGTCATTGAAGATGACCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 |
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| CDS-3UTR CAA 90 bp | GGTATTGTAAGAAAGGGGTCTATGAATTATTTAGTTAGGCAGAGACATTGCAGGGCTTCAGCCACACGTTaGTTGTCATCAGCTGATTCT | + |
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Preference number: 5 (lower is better) Translates to: GIVRKGSMNYLVRQRHCRASATR*LSSADS Trigger: AGAATCAGCTGATGACAACAAACGTGTGGCTGAAGC...CCTGCAATGTCTCTGCCTAACTAAATAATTCATAGACCCCTTTCTTACAATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| CDS TCA 72 bp | CAAATGTCTGAGGAGTGCGTCTTCATGTTCAGCCACTaGGCTGAGTCCCGCAGTGGCTGTGAGAGTCACCCA | + |
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Preference number: 6 (lower is better) Translates to: QMSEECVFMFSH*AESRSGCESHP Trigger: TGGGTGACTCTCACAGCCACTGCGGGACTCAGCTCAGTGGCTGAACATGAAGACGCACTCCTCAGACATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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| CDS CCA 72 bp | TACTCTCCGTTCCATCGGGGAAAGAGAAGCGGTCCCTaGGGTCCTTCATGCAAAGCCATCTCGGGAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: YSPFHRGKRSGP*GPSCKAISGVF Trigger: AAAAACTCCCGAGATGGCTTTGCATGAAGGACCCCAGGGACCGCTTCTCTTTCCCCGATGGAACGGAGAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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| CDS CAA 72 bp | GTCCAACTGACGGTTCCGCTGGATTTCACAATGGCCTaGGTCATGAGAGAGCCCTCAAAACGTCCGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VQLTVPLDFTMA*VMREPSKRPSA Trigger: TGCTGACGGACGTTTTGAGGGCTCTCTCATGACCAAGGCCATTGTGAAATCCAGCGGAACCGTCAGTTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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| CDS CCA 72 bp | GTTTTTCCAGAAACAGCCTCTTCACCCAGGGGGCCATaGGATGGTACGTTGAGGAAGATCTGTGGTGGACAT | + |
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Preference number: 6 (lower is better) Translates to: VFPETASSPRGP*DGTLRKICGGH Trigger: ATGTCCACCACAGATCTTCCTCAACGTACCATCCCATGGCCCCCTGGGTGAAGAGGCTGTTTCTGGAAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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| CDS GCA 72 bp | GCGACCAGAACTCTTTCTCCATCACTGGTAGGAGTCTaGTTCTTTTTCCCTGGAAATTTCCCCCTCACGGTT | + |
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Preference number: 6 (lower is better) Translates to: ATRTLSPSLVGV*FFFPGNFPLTV Trigger: AACCGTGAGGGGGAAATTTCCAGGGAAAAAGAAGCAGACTCCTACCAGTGATGGAGAAAGAGTTCTGGTCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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| CDS CCA 72 bp | TTCTCCATCACTGGTAGGAGTCTGCTTCTTTTTCCCTaGAAATTTCCCCCTCACGGTTCCCTTACTCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: FSITGRSLLLFP*KFPPHGSLTLR Trigger: ACGGAGAGTAAGGGAACCGTGAGGGGGAAATTTCCAGGGAAAAAGAAGCAGACTCCTACCAGTGATGGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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| CDS CCA 72 bp | GTAACGCACACCTCCTTCAGTTACAGTCTTCCCACCTaGCAGAACACTCACCTGACTGATGAAGTGTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: VTHTSFSYSLPT*QNTHLTDEVFL Trigger: AAGGAACACTTCATCAGTCAGGTGAGTGTTCTGCCAGGTGGGAAGACTGTAACTGAAGGAGGTGTGCGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211104.2 |
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| CDS CCA 72 bp | AAAGAGAACTATGTCAGGCAGCCAGAGCGACTCCGATaGAACCTTTATCGAATTAATTCCACCATAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KENYVRQPERLR*NLYRINSTIVF Trigger: GAAGACTATGGTGGAATTAATTCGATAAAGGTTCCATCGGAGTCGCTCTGGCTGCCTGACATAGTTCTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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| CDS CCA 72 bp | GGGGCCATGGGATGGTACGTTGAGGAAGATCTGTGGTaGACATTAATTACAAAAACCGTGACAATAATAGAC | + |
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Preference number: 6 (lower is better) Translates to: GAMGWYVEEDLW*TLITKTVTIID Trigger: GTCTATTATTGTCACGGTTTTTGTAATTAATGTCCACCACAGATCTTCCTCAACGTACCATCCCATGGCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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| CDS CCA 72 bp | CAGGGGGCCATGGGATGGTACGTTGAGGAAGATCTGTaGTGGACATTAATTACAAAAACCGTGACAATAATA | + |
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Preference number: 6 (lower is better) Translates to: QGAMGWYVEEDL*WTLITKTVTII Trigger: TATTATTGTCACGGTTTTTGTAATTAATGTCCACCACAGATCTTCCTCAACGTACCATCCCATGGCCCCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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| CDS CAA 72 bp | TTTGGTCTGTCCATTCCTGCTTCAGCCACACGTTTGTaGTCATCAGCTGATTCTTTTCATCCACATCTACAA | + |
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Preference number: 6 (lower is better) Translates to: FGLSIPASATRL*SSADSFHPHLQ Trigger: TTGTAGATGTGGATGAAAAGAATCAGCTGATGACAACAAACGTGTGGCTGAAGCAGGAATGGACAGACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000211104.2 |
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| CDS CAA 72 bp | ATTTTTGGTCTGTCCATTCCTGCTTCAGCCACACGTTaGTTGTCATCAGCTGATTCTTTTCATCCACATCTA | + |
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Preference number: 6 (lower is better) Translates to: IFGLSIPASATR*LSSADSFHPHL Trigger: TAGATGTGGATGAAAAGAATCAGCTGATGACAACAAACGTGTGGCTGAAGCAGGAATGGACAGACCAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060943.5 ENSMUST00000211104.2 |
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| CDS CAA 72 bp | AGTAAAAGCCTTCTCTTCTGTTGCCCTTCATCCCCTTaGCATTTAGTATCTCCCACTCTCCGTTATCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: SKSLLFCCPSSP*HLVSPTLRYQK Trigger: TTTTTGATAACGGAGAGTGGGAGATACTAAATGCAAAGGGGATGAAGGGCAACAGAAGAGAAGGCTTTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060943.5 ENSMUST00000079463.12 ENSMUST00000211104.2 |
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