Pregenerated sensors for CHRNA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035594Ensembl transcript IDs: ENSMUST00000093844.5, ENSMUST00000213960.2, ENSMUST00000217408.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TACTCCAAAGATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGTCCTAAGAGCTGCTTaGCTGCTCACTAAGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: YSKDALRHWLQVSRICQDVLRAA*LLTKSS Trigger: ACTGGACTTAGTGAGCAGTCAAGCAGCTCTTAGGAC...ATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATCTTTGGAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000217408.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTTGAAGAAAGTGTGTCACAGGAGGTGGGTTCTGAGGTTTCAGAAGCTCAAGGTCCTAAGAGCTGCTTaGCTGCTCACTAAGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LLKKVCHRRWVLRFQKLKVLRAA*LLTKSS Trigger: ACTGGACTTAGTGAGCAGTCAAGCAGCTCTTAGGAC...CTTGAGCTTCTGAAACCTCAGAACCCACCTCCTGTGACACACTTTCTTCAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| 3UTR CAA 90 bp | TCACTCTCTCTTCTTGCTGCCAGCCAATCCAGATGTAGAAAACTCTaGTCTTCAACATTATGTCTGCCTGTATGCTGCCATGCTTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SLSLLAASQSRCRKL*SSTLCLPVCCHASA Trigger: GGCAGAAGCATGGCAGCATACAGGCAGACATAATGTTGAAGACAAGAGTTTTCTACATCTGGATTGGCTGGCAGCAAGAAGAGAGAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| 3UTR CAA 90 bp | AGGTTTCAGAAGCTCAAGTCATGTCCAGTGGGTCACTCTCTCTTCTaGCTGCCAGCCAATCCAGATGTAGAAAACTCTTGTCTTCAACAT | + |
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Preference number: 2 (lower is better) Translates to: RFQKLKSCPVGHSLF*LPANPDVENSCLQH Trigger: ATGTTGAAGACAAGAGTTTTCTACATCTGGATTGGCTGGCAGCAAGAAGAGAGAGTGACCCACTGGACATGACTTGAGCTTCTGAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGTACTCAAGGCTATTACTACAGTTCTAATGGACAACATTAAGCCAATGTCAGTCCTAAGAGCTGCTTaGCTGCTCACTAAGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LVLKAITTVLMDNIKPMSVLRAA*LLTKSS Trigger: ACTGGACTTAGTGAGCAGTCAAGCAGCTCTTAGGAC...TGACATTGGCTTAATGTTGTCCATTAGAACTGTAGTAATAGCCTTGAGTACCAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| 3UTR CCA 72 bp | TGCATTTTCCAGTACTCCAAAGATGCCCTTCGTCACTaGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATG | + |
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Preference number: 3 (lower is better) Translates to: CIFQYSKDALRH*LQVSRICQDAM Trigger: CATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATCTTTGGAGTACTGGAAAATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000217408.2 |
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| 3UTR-3UTR CAA 90 bp | TATGATGTGTTTTATATCCATGAATACAGAACAGGGCAAAATGGAGCACACCCAGCCCTTCGTCACTGGTaGCAAGTTAGTAGGATTTGC | + |
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Preference number: 3 (lower is better) Translates to: YDVFYIHEYRTGQNGAHPALRHW*QVSRIC Trigger: GCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC...TGGGTGTGCTCCATTTTGCCCTGTTCTGTATTCATGGATATAAAACACATCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| 3UTR GCA 72 bp | TTCAACATTATGTCTGCCTGTATGCTGCCATGCTTCTaGCATGACAATAATGGACTAAACCTCAGAACCAGT | + |
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Preference number: 3 (lower is better) Translates to: FNIMSACMLPCF*HDNNGLNLRTS Trigger: ACTGGTTCTGAGGTTTAGTCCATTATTGTCATGGCAGAAGCATGGCAGCATACAGGCAGACATAATGTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| 3UTR GCA 72 bp | CTTGTCTTCAACATTATGTCTGCCTGTATGCTGCCATaGTTCTGCCATGACAATAATGGACTAAACCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LVFNIMSACMLP*FCHDNNGLNLR Trigger: TCTGAGGTTTAGTCCATTATTGTCATGGCAGAAGCATGGCAGCATACAGGCAGACATAATGTTGAAGACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| 3UTR GCA 72 bp | GCTGCAAAGTTAGTTAGCACAAAAGCCATTCCATATTaGCATATGAAGAATAAAGTAGACTTAAGGAGTTTC | + |
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Preference number: 3 (lower is better) Translates to: AAKLVSTKAIPY*HMKNKVDLRSF Trigger: GAAACTCCTTAAGTCTACTTTATTCTTCATATGGCAATATGGAATGGCTTTTGTGCTAACTAACTTTGCAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| CDS-3UTR CCA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCCAACTGTTTTCGTACTaGCCCCTTCGAAACGTCCGT | + |
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Preference number: 4 (lower is better) Translates to: ALRHWLQVSRICQDAMVGQLFSY*PLRNVR Trigger: ACGGACGTTTCGAAGGGGCCAGTACGAAAACAGTTG...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS-3UTR TCA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCCAGTGCCATTGTACCTaGCAACTGTTTTCGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: ALRHWLQVSRICQDAMVGQCHCT*QLFSYW Trigger: CCAGTACGAAAACAGTTGTCAGGTACAATGGCACTG...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS-3UTR CCA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCGAAGAAGAGCGGTGGTaGATGTTGATGGCAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: ALRHWLQVSRICQDAMVGEEERW*MLMAKT Trigger: TGTCTTTGCCATCAACATCCACCACCGCTCTTCTTC...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS-3UTR CCA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCGCTTCAACCAGACGTTaGTGGTCATTAGCTGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: ALRHWLQVSRICQDAMVGASTRR*WSLAGF Trigger: AAAACCAGCTAATGACCACCAACGTCTGGTTGAAGC...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 |
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| CDS-3UTR CCA 90 bp | GATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGTGGAAGAAGAGCGGTaGTGGATGTTGATGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DALRHWLQVSRICQDAMVVEEER*WMLMAK Trigger: CTTTGCCATCAACATCCACCACCGCTCTTCTTCCAC...TACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS-3UTR TCA 90 bp | GATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTATCCACGTCCACTAACTaGGATATTGCAAGGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: DALRHWLQVSRICQDAMVSTSTN*DIARPN Trigger: GTTTGGCCTTGCAATATCTCAGTTAGTGGACGTGGA...TACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 |
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| CDS-3UTR TCA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCCTTTTCACCTTCGTTTaGAGGGAGATAGAAGACAAC | + |
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Preference number: 4 (lower is better) Translates to: ALRHWLQVSRICQDAMVGLFTFV*REIEDN Trigger: GTTGTCTTCTATCTCCCTTCAAACGAAGGTGAAAAG...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS-3UTR CCA 90 bp | TCCAGTACTCCAAAGATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCCAACTGTTTTCGTACTaGCCCCTTCGAAACGTCCGT | + |
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Preference number: 4 (lower is better) Translates to: SSTPKMPFVTGCKLVGFAQLFSY*PLRNVR Trigger: ACGGACGTTTCGAAGGGGCCAGTACGAAAACAGTTG...GGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATCTTTGGAGTACTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000217408.2 |
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| CDS-3UTR CCA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCAGGATTATATCGACCTaGGATCCATCATACGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: ALRHWLQVSRICQDAMVGRIIST*DPSYVH Trigger: ATGGACGTATGATGGATCCCAGGTCGATATAATCCT...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS-3UTR CCA 90 bp | GCCTTGTTGAAGAAAGTGTGTCACAGGAGGTGGGTTCTGAGGTTTCAGAAGCTCGAAGAAGAGCGGTGGTaGATGTTGATGGCAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: ALLKKVCHRRWVLRFQKLEEERW*MLMAKT Trigger: TGTCTTTGCCATCAACATCCACCACCGCTCTTCTTC...GAGCTTCTGAAACCTCAGAACCCACCTCCTGTGACACACTTTCTTCAACAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| CDS-3UTR TCA 90 bp | TCCAGTACTCCAAAGATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCTCCACGTCCACTAACTaGGATATTGCAAGGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SSTPKMPFVTGCKLVGFASTSTN*DIARPN Trigger: GTTTGGCCTTGCAATATCTCAGTTAGTGGACGTGGA...GGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATCTTTGGAGTACTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093844.5 |
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| CDS-3UTR TCA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCCGAGAACTTGGGCTATaGATTTCCAATCTTCAACAA | + |
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Preference number: 4 (lower is better) Translates to: ALRHWLQVSRICQDAMVGRELGL*ISNLQQ Trigger: TTGTTGAAGATTGGAAATTCATAGCCCAAGTTCTCG...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS-3UTR GCA 90 bp | GATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAACATCTATCCATTCCTaGTTCAACCAGACGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: DALRHWLQVSRICQDAMVTSIHS*FNQTLV Trigger: CACCAACGTCTGGTTGAAGCAGGAATGGATAGATGT...TACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 |
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| CDS-3UTR CCA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCAGTTTGGGAAGCTTGTaGAGAAATATCTTACGAACC | + |
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Preference number: 4 (lower is better) Translates to: ALRHWLQVSRICQDAMVGSLGSL*RNILRT Trigger: GGTTCGTAAGATATTTCTCCACAAGCTTCCCAAACT...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS-3UTR CCA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCATCCGATCGAGAACTTaGGCTATGAATTTCCAATCT | + |
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Preference number: 4 (lower is better) Translates to: ALRHWLQVSRICQDAMVGIRSRT*AMNFQS Trigger: AGATTGGAAATTCATAGCCCAAGTTCTCGATCGGAT...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS-3UTR TCA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCTTGCAAGGCCAAACTTaGTTTTTATCTTGTCACTCA | + |
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Preference number: 4 (lower is better) Translates to: ALRHWLQVSRICQDAMVGLQGQT*FLSCHS Trigger: TGAGTGACAAGATAAAAATCAAGTTTGGCCTTGCAA...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 |
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| CDS-3UTR CCA 90 bp | GATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAAGGATTATATCGACCTaGGATCCATCATACGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: DALRHWLQVSRICQDAMVRIIST*DPSYVH Trigger: ATGGACGTATGATGGATCCCAGGTCGATATAATCCT...TACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| 3UTR CAA 72 bp | AAGCTCAAGTCATGTCCAGTGGGTCACTCTCTCTTCTaGCTGCCAGCCAATCCAGATGTAGAAAACTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: KLKSCPVGHSLF*LPANPDVENSC Trigger: ACAAGAGTTTTCTACATCTGGATTGGCTGGCAGCAAGAAGAGAGAGTGACCCACTGGACATGACTTGAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| CDS-3UTR TCA 90 bp | GATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGATCCACAGAGAGTCTaGAGGAACACGTATAATTTT | + |
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Preference number: 4 (lower is better) Translates to: DALRHWLQVSRICQDAMVDPQRV*RNTYNF Trigger: AAAATTATACGTGTTCCTTCAGACTCTCTGTGGATC...TACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 |
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| CDS-3UTR CCA 90 bp | GATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAAGTTTGGGAAGCTTGTaGAGAAATATCTTACGAACC | + |
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Preference number: 4 (lower is better) Translates to: DALRHWLQVSRICQDAMVSLGSL*RNILRT Trigger: GGTTCGTAAGATATTTCTCCACAAGCTTCCCAAACT...TACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS-3UTR TCA 90 bp | TCCAGTACTCCAAAGATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCCGAGAACTTGGGCTATaGATTTCCAATCTTCAACAA | + |
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Preference number: 4 (lower is better) Translates to: SSTPKMPFVTGCKLVGFARELGL*ISNLQQ Trigger: TTGTTGAAGATTGGAAATTCATAGCCCAAGTTCTCG...GGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATCTTTGGAGTACTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000217408.2 |
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| 3UTR CAA 72 bp | CTTCTTGCTGCCAGCCAATCCAGATGTAGAAAACTCTaGTCTTCAACATTATGTCTGCCTGTATGCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LLAASQSRCRKL*SSTLCLPVCCH Trigger: ATGGCAGCATACAGGCAGACATAATGTTGAAGACAAGAGTTTTCTACATCTGGATTGGCTGGCAGCAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| CDS-3UTR CCA 90 bp | TATGATGTGTTTTATATCCATGAATACAGAACAGGGCAAAATGGAGCACACCCAGTGGAAGAAGAGCGGTaGTGGATGTTGATGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: YDVFYIHEYRTGQNGAHPVEEER*WMLMAK Trigger: CTTTGCCATCAACATCCACCACCGCTCTTCTTCCAC...TGGGTGTGCTCCATTTTGCCCTGTTCTGTATTCATGGATATAAAACACATCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| CDS-3UTR CCA 90 bp | TCCATGAATACAGAACAGGGCAAAATGGAGCACACCCATAGTCCTAGCTACTCAATCCGATCGAGAACTTaGGCTATGAATTTCCAATCT | + |
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Preference number: 4 (lower is better) Translates to: SMNTEQGKMEHTHSPSYSIRSRT*AMNFQS Trigger: AGATTGGAAATTCATAGCCCAAGTTCTCGATCGGAT...TGAGTAGCTAGGACTATGGGTGTGCTCCATTTTGCCCTGTTCTGTATTCATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| CDS-3UTR TCA 90 bp | GAATGTCTGCAGGAGATGCCTGTTATATGTTTTCAGTGGACAGTAAGCTGCAAACTTTTCACCTTCGTTTaGAGGGAGATAGAAGACAAC | + |
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Preference number: 4 (lower is better) Translates to: ECLQEMPVICFQWTVSCKLFTFV*REIEDN Trigger: GTTGTCTTCTATCTCCCTTCAAACGAAGGTGAAAAG...TTTGCAGCTTACTGTCCACTGAAAACATATAACAGGCATCTCCTGCAGACATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| CDS-3UTR GCA 90 bp | ACAGTCTTCAAATATAGTTGCATTTTCCAGTACTCCAAAGATGCCCTTCGTCACACATCTATCCATTCCTaGTTCAACCAGACGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: TVFKYSCIFQYSKDALRHTSIHS*FNQTLV Trigger: CACCAACGTCTGGTTGAAGCAGGAATGGATAGATGT...GTGACGAAGGGCATCTTTGGAGTACTGGAAAATGCAACTATATTTGAAGACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093844.5 |
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| CDS-3UTR CCA 90 bp | TCCATGAATACAGAACAGGGCAAAATGGAGCACACCCATAGTCCTAGCTACTCAATGAGCCGAATTTCATaGAGCAATTTTGGAGATCAA | + |
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Preference number: 4 (lower is better) Translates to: SMNTEQGKMEHTHSPSYSMSRIS*SNFGDQ Trigger: TTGATCTCCAAAATTGCTCCATGAAATTCGGCTCAT...TGAGTAGCTAGGACTATGGGTGTGCTCCATTTTGCCCTGTTCTGTATTCATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| CDS-3UTR CCA 90 bp | TTTATATCCATGAATACAGAACAGGGCAAAATGGAGCACACCCATAGTCCTAGCAGGATTATATCGACCTaGGATCCATCATACGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: FISMNTEQGKMEHTHSPSRIIST*DPSYVH Trigger: ATGGACGTATGATGGATCCCAGGTCGATATAATCCT...GCTAGGACTATGGGTGTGCTCCATTTTGCCCTGTTCTGTATTCATGGATATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
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| CDS-3UTR TCA 90 bp | TTGGTACTCAAGGCTATTACTACAGTTCTAATGGACAACATTAAGCCAATGTCACAGTGCCATTGTACCTaGCAACTGTTTTCGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: LVLKAITTVLMDNIKPMSQCHCT*QLFSYW Trigger: CCAGTACGAAAACAGTTGTCAGGTACAATGGCACTG...TGACATTGGCTTAATGTTGTCCATTAGAACTGTAGTAATAGCCTTGAGTACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS-3UTR TCA 90 bp | TTGGTACTCAAGGCTATTACTACAGTTCTAATGGACAACATTAAGCCAATGTCAAAGTACCTATCGGCATaGCTTCTCATGCAGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LVLKAITTVLMDNIKPMSKYLSA*LLMQSS Trigger: ACTGCTCTGCATGAGAAGTCATGCCGATAGGTACTT...TGACATTGGCTTAATGTTGTCCATTAGAACTGTAGTAATAGCCTTGAGTACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS-3UTR CCA 90 bp | TTGGTACTCAAGGCTATTACTACAGTTCTAATGGACAACATTAAGCCAATGTCAGAAGAAGAGCGGTGGTaGATGTTGATGGCAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: LVLKAITTVLMDNIKPMSEEERW*MLMAKT Trigger: TGTCTTTGCCATCAACATCCACCACCGCTCTTCTTC...TGACATTGGCTTAATGTTGTCCATTAGAACTGTAGTAATAGCCTTGAGTACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS-3UTR CCA 90 bp | TTTAAACAGTCTTCAAATATAGTTGCATTTTCCAGTACTCCAAAGATGCCCTTCGTGGAAGAAGAGCGGTaGTGGATGTTGATGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: FKQSSNIVAFSSTPKMPFVEEER*WMLMAK Trigger: CTTTGCCATCAACATCCACCACCGCTCTTCTTCCAC...GAAGGGCATCTTTGGAGTACTGGAAAATGCAACTATATTTGAAGACTGTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000217408.2 |
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| CDS-3UTR TCA 90 bp | TTTAAACAGTCTTCAAATATAGTTGCATTTTCCAGTACTCCAAAGATGCCCTTCCAGTGCCATTGTACCTaGCAACTGTTTTCGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: FKQSSNIVAFSSTPKMPFQCHCT*QLFSYW Trigger: CCAGTACGAAAACAGTTGTCAGGTACAATGGCACTG...GAAGGGCATCTTTGGAGTACTGGAAAATGCAACTATATTTGAAGACTGTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000217408.2 |
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| CDS-3UTR TCA 90 bp | GTTAGCACAAAAGCCATTCCATATTGCCATATGAAGAATAAAGTAGACTTAAGGAAGTACCTATCGGCATaGCTTCTCATGCAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSTKAIPYCHMKNKVDLRKYLSA*LLMQSS Trigger: ACTGCTCTGCATGAGAAGTCATGCCGATAGGTACTT...CCTTAAGTCTACTTTATTCTTCATATGGCAATATGGAATGGCTTTTGTGCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTCTTCAAATATAGTTGCATTTTCCAGTACTCCAAAGATGCCCTTCGTCACCGAGAACTTGGGCTATaGATTTCCAATCTTCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: TVFKYSCIFQYSKDALRHRELGL*ISNLQQ Trigger: TTGTTGAAGATTGGAAATTCATAGCCCAAGTTCTCG...GTGACGAAGGGCATCTTTGGAGTACTGGAAAATGCAACTATATTTGAAGACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000217408.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTACTCAAGGCTATTACTACAGTTCTAATGGACAACATTAAGCCAATGTCAACTTTTGTAGTTTGCTaGCTGCGTCCAAGTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLKAITTVLMDNIKPMSTFVVC*LRPSDS Trigger: ACTGTCACTTGGACGCAGCCAGCAAACTACAAAAGT...TGACATTGGCTTAATGTTGTCCATTAGAACTGTAGTAATAGCCTTGAGTACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTCTTCAAATATAGTTGCATTTTCCAGTACTCCAAAGATGCCCTTCGTCACTTGCAAGGCCAAACTTaGTTTTTATCTTGTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVFKYSCIFQYSKDALRHLQGQT*FLSCHS Trigger: TGAGTGACAAGATAAAAATCAAGTTTGGCCTTGCAA...GTGACGAAGGGCATCTTTGGAGTACTGGAAAATGCAACTATATTTGAAGACTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093844.5 |
||
| CDS-3UTR CCA 90 bp | TTTAAACAGTCTTCAAATATAGTTGCATTTTCCAGTACTCCAAAGATGCCCTTCGCTTCAACCAGACGTTaGTGGTCATTAGCTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FKQSSNIVAFSSTPKMPFASTRR*WSLAGF Trigger: AAAACCAGCTAATGACCACCAACGTCTGGTTGAAGC...GAAGGGCATCTTTGGAGTACTGGAAAATGCAACTATATTTGAAGACTGTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093844.5 |
||
| CDS-3UTR CCA 90 bp | TTGGTACTCAAGGCTATTACTACAGTTCTAATGGACAACATTAAGCCAATGTCAATGAGCCGAATTTCATaGAGCAATTTTGGAGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVLKAITTVLMDNIKPMSMSRIS*SNFGDQ Trigger: TTGATCTCCAAAATTGCTCCATGAAATTCGGCTCAT...TGACATTGGCTTAATGTTGTCCATTAGAACTGTAGTAATAGCCTTGAGTACCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS-3UTR CCA 90 bp | GTTAGCACAAAAGCCATTCCATATTGCCATATGAAGAATAAAGTAGACTTAAGGAGTTTGGGAAGCTTGTaGAGAAATATCTTACGAACC | + |
|
Preference number: 4 (lower is better) Translates to: VSTKAIPYCHMKNKVDLRSLGSL*RNILRT Trigger: GGTTCGTAAGATATTTCTCCACAAGCTTCCCAAACT...CCTTAAGTCTACTTTATTCTTCATATGGCAATATGGAATGGCTTTTGTGCTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAACAGTCTTCAAATATAGTTGCATTTTCCAGTACTCCAAAGATGCCCTTCATCCGATCGAGAACTTaGGCTATGAATTTCCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FKQSSNIVAFSSTPKMPFIRSRT*AMNFQS Trigger: AGATTGGAAATTCATAGCCCAAGTTCTCGATCGGAT...GAAGGGCATCTTTGGAGTACTGGAAAATGCAACTATATTTGAAGACTGTTTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000217408.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAACAGTCTTCAAATATAGTTGCATTTTCCAGTACTCCAAAGATGCCCTTCATGAGCCGAATTTCATaGAGCAATTTTGGAGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FKQSSNIVAFSSTPKMPFMSRIS*SNFGDQ Trigger: TTGATCTCCAAAATTGCTCCATGAAATTCGGCTCAT...GAAGGGCATCTTTGGAGTACTGGAAAATGCAACTATATTTGAAGACTGTTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | GATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTATCCGTCCGGTTCCCCTaGCTCCCCATTGCGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: DALRHWLQVSRICQDAMVSVRFP*LPIALM Trigger: CATGAGCGCAATGGGGAGCAAGGGGAACCGGACGGA...TACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCGAGCGGTGGTGGATGTaGATGGCAAAGACAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: ALRHWLQVSRICQDAMVGERWWM*MAKTVT Trigger: GGTGACTGTCTTTGCCATCAACATCCACCACCGCTC...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS CCA 90 bp | CGAACCCACGGCGCCATAGCATTGTGTGTGGAAGAAGAGCGGTGGTaGATGTTGATGGCAAAGACAGTCACCATAATGGATAGGGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: RTHGAIALCVEEERW*MLMAKTVTIMDRVT Trigger: CGTGACCCTATCCATTATGGTGACTGTCTTTGCCATCAACATCCACCACCGCTCTTCTTCCACACACAATGCTATGGCGCCGTGGGTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | AAACTCTTGTCTTCAACATTATGTCTGCCTGTATGCTGCCATGCTTCTGCCATGTCCGTCCGGTTCCCCTaGCTCCCCATTGCGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: KLLSSTLCLPVCCHASAMSVRFP*LPIALM Trigger: CATGAGCGCAATGGGGAGCAAGGGGAACCGGACGGA...CATGGCAGAAGCATGGCAGCATACAGGCAGACATAATGTTGAAGACAAGAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
||
| CDS CCA 90 bp | TTACGAACCCACGGCGCCATAGCATTGTGTGTGGAAGAAGAGCGGTaGTGGATGTTGATGGCAAAGACAGTCACCATAATGGATAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRTHGAIALCVEEER*WMLMAKTVTIMDRV Trigger: GACCCTATCCATTATGGTGACTGTCTTTGCCATCAACATCCACCACCGCTCTTCTTCCACACACAATGCTATGGCGCCGTGGGTTCGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGTACTCCAAAGATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCGAGCGGTGGTGGATGTaGATGGCAAAGACAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SSTPKMPFVTGCKLVGFAERWWM*MAKTVT Trigger: GGTGACTGTCTTTGCCATCAACATCCACCACCGCTC...GGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATCTTTGGAGTACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCAACTGTCTTCATGTTTaGCAGCAGAGGATAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALRHWLQVSRICQDAMVGNCLHV*QQRIAQ Trigger: CTGAGCTATCCTCTGCTGCAAAACATGAAGACAGTT...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 |
||
| CDS-3UTR CAA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCCATCCGATCGAGAACTaGGGCTATGAATTTCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: ALRHWLQVSRICQDAMVGHPIEN*GYEFPI Trigger: GATTGGAAATTCATAGCCCAAGTTCTCGATCGGATG...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS TCA 90 bp | AGAGACCAGCACGGAAGTGCACAGGCTAATCTTTTCACCTTCGTTTaGAGGGAGATAGAAGACAACCACAGTCAGAAACGAGAGCCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: RDQHGSAQANLFTFV*REIEDNHSQKREPD Trigger: ATCGGGCTCTCGTTTCTGACTGTGGTTGTCTTCTATCTCCCTTCAAACGAAGGTGAAAAGATTAGCCTGTGCACTTCCGTGCTGGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | GTCATGTCCAGTGGGTCACTCTCTCTTCTTGCTGCCAGCCAATCCAGATGTAGACAAGTGACAGTGCCATaGTACCTGACAACTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VMSSGSLSLLAASQSRCRQVTVP*YLTTVF Trigger: GAAAACAGTTGTCAGGTACAATGGCACTGTCACTTG...TCTACATCTGGATTGGCTGGCAGCAAGAAGAGAGAGTGACCCACTGGACATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | GATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTACAAGTGACAGTGCCATaGTACCTGACAACTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DALRHWLQVSRICQDAMVQVTVP*YLTTVF Trigger: GAAAACAGTTGTCAGGTACAATGGCACTGTCACTTG...TACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | GCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATGCGATGGTAGGCTCTTTTCACCTTCGTTaGAAGGGAGATAGAAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: ALRHWLQVSRICQDAMVGSFHLR*KGDRRQ Trigger: TTGTCTTCTATCTCCCTTCAAACGAAGGTGAAAAGA...GCCTACCATCGCATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | GATGTAGAAAACTCTTGTCTTCAACATTATGTCTGCCTGTATGCTGCCATGCTTGAGCGGTGGTGGATGTaGATGGCAAAGACAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: DVENSCLQHYVCLYAAMLERWWM*MAKTVT Trigger: GGTGACTGTCTTTGCCATCAACATCCACCACCGCTC...AAGCATGGCAGCATACAGGCAGACATAATGTTGAAGACAAGAGTTTTCTACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
||
| CDS TCA 90 bp | CCAGAAGAAACGTCCATAGAAACATCCGATCGAGAACTTGGGCTATaGATTTCCAATCTTCAACAACCTCGCGGACGTCGTTCTCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PEETSIETSDRELGL*ISNLQQPRGRRSLS Trigger: TGAAAGAGAACGACGTCCGCGAGGTTGTTGAAGATTGGAAATTCATAGCCCAAGTTCTCGATCGGATGTTTCTATGGACGTTTCTTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | TACTCCAAAGATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATAACTGTCTTCATGTTTaGCAGCAGAGGATAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YSKDALRHWLQVSRICQDNCLHV*QQRIAQ Trigger: CTGAGCTATCCTCTGCTGCAAAACATGAAGACAGTT...ATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATCTTTGGAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093844.5 |
||
| CDS-3UTR CAA 90 bp | TACTCCAAAGATGCCCTTCGTCACTGGTTGCAAGTTAGTAGGATTTGCCAGGATCATCCGATCGAGAACTaGGGCTATGAATTTCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: YSKDALRHWLQVSRICQDHPIEN*GYEFPI Trigger: GATTGGAAATTCATAGCCCAAGTTCTCGATCGGATG...ATCCTGGCAAATCCTACTAACTTGCAACCAGTGACGAAGGGCATCTTTGGAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000217408.2 |
||
| CDS CCA 90 bp | ATTGAAACCAGAAGAAACGTCCATAGAAACATCCGATCGAGAACTTaGGCTATGAATTTCCAATCTTCAACAACCTCGCGGACGTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IETRRNVHRNIRSRT*AMNFQSSTTSRTSF Trigger: GAACGACGTCCGCGAGGTTGTTGAAGATTGGAAATTCATAGCCCAAGTTCTCGATCGGATGTTTCTATGGACGTTTCTTCTGGTTTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS TCA 90 bp | TTTTCTCATCCACGTCCACTAACTGAGATATTGCAAGGCCAAACTTaGTTTTTATCTTGTCACTCAGGTGTTCCACAGGACGAACCCACT | + |
|
Preference number: 5 (lower is better) Translates to: FSHPRPLTEILQGQT*FLSCHSGVPQDEPT Trigger: AGTGGGTTCGTCCTGTGGAACACCTGAGTGACAAGATAAAAATCAAGTTTGGCCTTGCAATATCTCAGTTAGTGGACGTGGATGAGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTCTTCAAATATAGTTGCATTTTCCAGTACTCCAAAGATGCCCTTCGTCACCAAGTGACAGTGCCATaGTACCTGACAACTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVFKYSCIFQYSKDALRHQVTVP*YLTTVF Trigger: GAAAACAGTTGTCAGGTACAATGGCACTGTCACTTG...GTGACGAAGGGCATCTTTGGAGTACTGGAAAATGCAACTATATTTGAAGACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | AAACTCTTGTCTTCAACATTATGTCTGCCTGTATGCTGCCATGCTTCTGCCATGTCTTTTCACCTTCGTTaGAAGGGAGATAGAAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: KLLSSTLCLPVCCHASAMSFHLR*KGDRRQ Trigger: TTGTCTTCTATCTCCCTTCAAACGAAGGTGAAAAGA...CATGGCAGAAGCATGGCAGCATACAGGCAGACATAATGTTGAAGACAAGAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTACTCAAGGCTATTACTACAGTTCTAATGGACAACATTAAGCCAATGTCATGCTTCAACCAGACGTaGGTGGTCATTAGCTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVLKAITTVLMDNIKPMSCFNQT*VVISWF Trigger: AAACCAGCTAATGACCACCAACGTCTGGTTGAAGCA...TGACATTGGCTTAATGTTGTCCATTAGAACTGTAGTAATAGCCTTGAGTACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAACAGTCTTCAAATATAGTTGCATTTTCCAGTACTCCAAAGATGCCCTTCTGCTTCAACCAGACGTaGGTGGTCATTAGCTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FKQSSNIVAFSSTPKMPFCFNQT*VVISWF Trigger: AAACCAGCTAATGACCACCAACGTCTGGTTGAAGCA...GAAGGGCATCTTTGGAGTACTGGAAAATGCAACTATATTTGAAGACTGTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093844.5 |
||
| CDS-3UTR CAA 90 bp | ACAGTCTTCAAATATAGTTGCATTTTCCAGTACTCCAAAGATGCCCTTCGTCACAACTTGATTTTTATCTaGTCACTCAGGTGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TVFKYSCIFQYSKDALRHNLIFI*SLRCST Trigger: TGTGGAACACCTGAGTGACAAGATAAAAATCAAGTT...GTGACGAAGGGCATCTTTGGAGTACTGGAAAATGCAACTATATTTGAAGACTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093844.5 |
||
| CDS-3UTR CAA 90 bp | GTTAGCACAAAAGCCATTCCATATTGCCATATGAAGAATAAAGTAGACTTAAGGCATCCGATCGAGAACTaGGGCTATGAATTTCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: VSTKAIPYCHMKNKVDLRHPIEN*GYEFPI Trigger: GATTGGAAATTCATAGCCCAAGTTCTCGATCGGATG...CCTTAAGTCTACTTTATTCTTCATATGGCAATATGGAATGGCTTTTGTGCTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | TATGATGTGTTTTATATCCATGAATACAGAACAGGGCAAAATGGAGCACACCCAATCAGAGGTATGACTTaGGAAGATGACGGTATAATT | + |
|
Preference number: 5 (lower is better) Translates to: YDVFYIHEYRTGQNGAHPIRGMT*EDDGII Trigger: AATTATACCGTCATCTTCCAAAGTCATACCTCTGAT...TGGGTGTGCTCCATTTTGCCCTGTTCTGTATTCATGGATATAAAACACATCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTACTCAAGGCTATTACTACAGTTCTAATGGACAACATTAAGCCAATGTCAAACTTGATTTTTATCTaGTCACTCAGGTGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LVLKAITTVLMDNIKPMSNLIFI*SLRCST Trigger: TGTGGAACACCTGAGTGACAAGATAAAAATCAAGTT...TGACATTGGCTTAATGTTGTCCATTAGAACTGTAGTAATAGCCTTGAGTACCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTACTCAAGGCTATTACTACAGTTCTAATGGACAACATTAAGCCAATGTCAATCAGAGGTATGACTTaGGAAGATGACGGTATAATT | + |
|
Preference number: 5 (lower is better) Translates to: LVLKAITTVLMDNIKPMSIRGMT*EDDGII Trigger: AATTATACCGTCATCTTCCAAAGTCATACCTCTGAT...TGACATTGGCTTAATGTTGTCCATTAGAACTGTAGTAATAGCCTTGAGTACCAA 37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAACAGTCTTCAAATATAGTTGCATTTTCCAGTACTCCAAAGATGCCCTTCATTGCAAGGCCAAACTaGATTTTTATCTTGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: FKQSSNIVAFSSTPKMPFIARPN*IFILSL Trigger: GAGTGACAAGATAAAAATCAAGTTTGGCCTTGCAAT...GAAGGGCATCTTTGGAGTACTGGAAAATGCAACTATATTTGAAGACTGTTTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093844.5 |
||
| CDS-3UTR CAA 90 bp | TTTAAACAGTCTTCAAATATAGTTGCATTTTCCAGTACTCCAAAGATGCCCTTCATCAGAGGTATGACTTaGGAAGATGACGGTATAATT | + |
|
Preference number: 5 (lower is better) Translates to: FKQSSNIVAFSSTPKMPFIRGMT*EDDGII Trigger: AATTATACCGTCATCTTCCAAAGTCATACCTCTGAT...GAAGGGCATCTTTGGAGTACTGGAAAATGCAACTATATTTGAAGACTGTTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000217408.2 |
||
| CDS CCA 72 bp | CACGGCGCCATAGCATTGTGTGTGGAAGAAGAGCGGTaGTGGATGTTGATGGCAAAGACAGTCACCATAATG | + |
|
Preference number: 6 (lower is better) Translates to: HGAIALCVEEER*WMLMAKTVTIM Trigger: CATTATGGTGACTGTCTTTGCCATCAACATCCACCACCGCTCTTCTTCCACACACAATGCTATGGCGCCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS CCA 72 bp | GGCGCCATAGCATTGTGTGTGGAAGAAGAGCGGTGGTaGATGTTGATGGCAAAGACAGTCACCATAATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GAIALCVEEERW*MLMAKTVTIMD Trigger: ATCCATTATGGTGACTGTCTTTGCCATCAACATCCACCACCGCTCTTCTTCCACACACAATGCTATGGCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS TCA 72 bp | ACGTCCATAGAAACATCCGATCGAGAACTTGGGCTATaGATTTCCAATCTTCAACAACCTCGCGGACGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: TSIETSDRELGL*ISNLQQPRGRR Trigger: ACGACGTCCGCGAGGTTGTTGAAGATTGGAAATTCATAGCCCAAGTTCTCGATCGGATGTTTCTATGGACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS CCA 72 bp | GGTCACATCTATAGTGCAAGAACTTTTGTAGTTTGCTaGCTGCGTCCAAGTGACAGTGCCATTGTACCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GHIYSARTFVVC*LRPSDSAIVPD Trigger: GTCAGGTACAATGGCACTGTCACTTGGACGCAGCCAGCAAACTACAAAAGTTCTTGCACTATAGATGTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS CCA 72 bp | CTGTCGACATCTTGGTCCTCTAGGATTATATCGACCTaGGATCCATCATACGTCCATGAGCCGAATTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: LSTSWSSRIIST*DPSYVHEPNFM Trigger: CATGAAATTCGGCTCATGGACGTATGATGGATCCCAGGTCGATATAATCCTAGAGGACCAAGATGTCGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
||
| CDS CCA 72 bp | AGTACCTATCGGCATGACTTCTCATGCAGAGCAGTTTaGGAAGCTTGTGGAGAAATATCTTACGAACCCACG | + |
|
Preference number: 6 (lower is better) Translates to: STYRHDFSCRAV*EACGEISYEPT Trigger: CGTGGGTTCGTAAGATATTTCTCCACAAGCTTCCCAAACTGCTCTGCATGAGAAGTCATGCCGATAGGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS TCA 72 bp | CACGGAAGTGCACAGGCTAATCTTTTCACCTTCGTTTaGAGGGAGATAGAAGACAACCACAGTCAGAAACGA | + |
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Preference number: 6 (lower is better) Translates to: HGSAQANLFTFV*REIEDNHSQKR Trigger: TCGTTTCTGACTGTGGTTGTCTTCTATCTCCCTTCAAACGAAGGTGAAAAGATTAGCCTGTGCACTTCCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS CAA 72 bp | GTGAACACCAAGTACTCCCCGATCAGAGGTATGACTTaGGAAGATGACGGTATAATTTCCTCAATCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: VNTKYSPIRGMT*EDDGIISSITS Trigger: GCTGGTGATTGAGGAAATTATACCGTCATCTTCCAAAGTCATACCTCTGATCGGGGAGTACTTGGTGTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS GCA 72 bp | AAAGGTCACATCTATAGTGCAAGAACTTTTGTAGTTTaGTGGCTGCGTCCAAGTGACAGTGCCATTGTACCT | + |
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Preference number: 6 (lower is better) Translates to: KGHIYSARTFVV*WLRPSDSAIVP Trigger: AGGTACAATGGCACTGTCACTTGGACGCAGCCAGCAAACTACAAAAGTTCTTGCACTATAGATGTGACCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS CCA 72 bp | AGAAGAAACGTCCATAGAAACATCCGATCGAGAACTTaGGCTATGAATTTCCAATCTTCAACAACCTCGCGG | + |
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Preference number: 6 (lower is better) Translates to: RRNVHRNIRSRT*AMNFQSSTTSR Trigger: CCGCGAGGTTGTTGAAGATTGGAAATTCATAGCCCAAGTTCTCGATCGGATGTTTCTATGGACGTTTCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 ENSMUST00000217408.2 |
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| CDS TCA 72 bp | GTCATTAGCTGGTTTTTCTCATCCACGTCCACTAACTaGGATATTGCAAGGCCAAACTTGATTTTTATCTTG | + |
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Preference number: 6 (lower is better) Translates to: VISWFFSSTSTN*DIARPNLIFIL Trigger: CAAGATAAAAATCAAGTTTGGCCTTGCAATATCTCAGTTAGTGGACGTGGATGAGAAAAACCAGCTAATGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 |
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| CDS TCA 72 bp | ATCAAACAAAACGATGTCTGGGATCCACAGAGAGTCTaGAGGAACACGTATAATTTTTATTCCACCATAGTC | + |
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Preference number: 6 (lower is better) Translates to: IKQNDVWDPQRV*RNTYNFYSTIV Trigger: GACTATGGTGGAATAAAAATTATACGTGTTCCTTCAGACTCTCTGTGGATCCCAGACATCGTTTTGTTTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093844.5 ENSMUST00000213960.2 |
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