Pregenerated sensors for CHRNA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032303Ensembl transcript IDs: ENSMUST00000034851.7, ENSMUST00000214204.3, ENSMUST00000238862.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGCAGGACTGCCTGCGCCCTTGAGATTTCACATACTGCCACTGTaGGCGCCAGAGGCCAGATGTCTGCCCTGCTTAGTTTTGCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: GAGLPAPLRFHILPL*APEARCLPCLVLLL Trigger: CAAGAGCAAAACTAAGCAGGGCAGACATCTGGCCTCTGGCGCCCACAGTGGCAGTATGTGAAATCTCAAGGGCGCAGGCAGTCCTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR GCA 90 bp | CCTACCGTGCAATGCTGTTTGGGAGGTCATGAGGTCATGAGGGCATaGCTTGACAAAGGGAACCAAGATTCCAGAAACACTCGCCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: PTVQCCLGGHEVMRA*LDKGNQDSRNTRPF Trigger: GAAAGGGCGAGTGTTTCTGGAATCTTGGTTCCCTTTGTCAAGGCATGCCCTCATGACCTCATGACCTCCCAAACAGCATTGCACGGTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
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| 3UTR TCA 90 bp | CGTGTGAACCTACCGTGCAATGCTGTTTGGGAGGTCATGAGGTCATaGGGGCATGCCTTGACAAAGGGAACCAAGATTCCAGAAACACTC | + |
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Preference number: 1 (lower is better) Translates to: RVNLPCNAVWEVMRS*GHALTKGTKIPETL Trigger: GAGTGTTTCTGGAATCTTGGTTCCCTTTGTCAAGGCATGCCCTCATGACCTCATGACCTCCCAAACAGCATTGCACGGTAGGTTCACACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
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| 3UTR CCA 90 bp | CTACTCAGAGGTGTGGAACCTCTAAGAAGAAAGGAGCTTGGTCATTaGGAGTGCGTCCTTCTTGGAAAAACAGGAGCCCAGCTTCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: LLRGVEPLRRKELGH*ECVLLGKTGAQLLP Trigger: GGGAAGAAGCTGGGCTCCTGTTTTTCCAAGAAGGACGCACTCCCAATGACCAAGCTCCTTTCTTCTTAGAGGTTCCACACCTCTGAGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR GCA 90 bp | AGAGGTGTGGAACCTCTAAGAAGAAAGGAGCTTGGTCATTGGGAGTaGGTCCTTCTTGGAAAAACAGGAGCCCAGCTTCTTCCCCATTCT | + |
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Preference number: 1 (lower is better) Translates to: RGVEPLRRKELGHWE*VLLGKTGAQLLPHS Trigger: AGAATGGGGAAGAAGCTGGGCTCCTGTTTTTCCAAGAAGGACGCACTCCCAATGACCAAGCTCCTTTCTTCTTAGAGGTTCCACACCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR CCA 90 bp | ACCTCTAAGAAGAAAGGAGCTTGGTCATTGGGAGTGCGTCCTTCTTaGAAAAACAGGAGCCCAGCTTCTTCCCCATTCTTTCTGCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: TSKKKGAWSLGVRPS*KNRSPASSPFFLLP Trigger: TGGAAGCAGAAAGAATGGGGAAGAAGCTGGGCTCCTGTTTTTCCAAGAAGGACGCACTCCCAATGACCAAGCTCCTTTCTTCTTAGAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR TCA 90 bp | GGCCTGGAATTCACAGAGATCCAACCTGCCTCTGACTCTACCTCTTaGGTGCTGGGATTAAAAAGTCTTTCAGGGCTCTATGGGATGTTT | + |
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Preference number: 1 (lower is better) Translates to: GLEFTEIQPASDSTS*VLGLKSLSGLYGMF Trigger: AAACATCCCATAGAGCCCTGAAAGACTTTTTAATCCCAGCACTCAAGAGGTAGAGTCAGAGGCAGGTTGGATCTCTGTGAATTCCAGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
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| 3UTR TCA 90 bp | GCGCCAGAGGCCAGATGTCTGCCCTGCTTAGTTTTGCTCTTGCTTTaGTCTGATCTTTTCTACACATCTGTGCTCCTTTGTGGAATAGAA | + |
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Preference number: 1 (lower is better) Translates to: APEARCLPCLVLLLL*SDLFYTSVLLCGIE Trigger: TTCTATTCCACAAAGGAGCACAGATGTGTAGAAAAGATCAGATCAAAGCAAGAGCAAAACTAAGCAGGGCAGACATCTGGCCTCTGGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR TCA 90 bp | ACAAGATACAATGACACAGTCCTGGAATCCCACTACAGAGGAAGCTaGGACAGTATAATTGTGAGTTCAAGGCCAGCCTGGACTACAAGT | + |
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Preference number: 1 (lower is better) Translates to: TRYNDTVLESHYRGS*DSIIVSSRPAWTTS Trigger: ACTTGTAGTCCAGGCTGGCCTTGAACTCACAATTATACTGTCTCAGCTTCCTCTGTAGTGGGATTCCAGGACTGTGTCATTGTATCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
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| 3UTR TCA 90 bp | TTAAAGGGGAAGTCAAGTGCTTGGCACCAGGTTAATACAATACTGTaGAGGTGCCTCAAGAATTATTCAGACTTGTGCCTGTGCAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: LKGKSSAWHQVNTIL*RCLKNYSDLCLCKL Trigger: GAGCTTGCACAGGCACAAGTCTGAATAATTCTTGAGGCACCTTCACAGTATTGTATTAACCTGGTGCCAAGCACTTGACTTCCCCTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR CCA 90 bp | GAAGTATTGTCTCATCACAAGCCCAAAAGGAATAGACCACATGAGTaGCTGTGGACTGAAACCATGAGCCCAAATACACATTTCCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: EVLSHHKPKRNRPHE*LWTETMSPNTHFLL Trigger: AAGGAGGAAATGTGTATTTGGGCTCATGGTTTCAGTCCACAGCCACTCATGTGGTCTATTCCTTTTGGGCTTGTGATGAGACAATACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR TCA 90 bp | GCCCAGCTTCTTCCCCATTCTTTCTGCTTCCAGGCTGCTTTGAGGTaGATGTCATTGATGAATCAGACACTTCTTACTATGAAGTATTGT | + |
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Preference number: 1 (lower is better) Translates to: AQLLPHSFCFQAALR*MSLMNQTLLTMKYC Trigger: ACAATACTTCATAGTAAGAAGTGTCTGATTCATCAATGACATTCACCTCAAAGCAGCCTGGAAGCAGAAAGAATGGGGAAGAAGCTGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR GCA 90 bp | AAAAACAGGAGCCCAGCTTCTTCCCCATTCTTTCTGCTTCCAGGCTaGTTTGAGGTGAATGTCATTGATGAATCAGACACTTCTTACTAT | + |
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Preference number: 1 (lower is better) Translates to: KNRSPASSPFFLLPG*FEVNVIDESDTSYY Trigger: ATAGTAAGAAGTGTCTGATTCATCAATGACATTCACCTCAAAGCAGCCTGGAAGCAGAAAGAATGGGGAAGAAGCTGGGCTCCTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR TCA 90 bp | AGCCCAAAAGGAATAGACCACATGAGTGGCTGTGGACTGAAACCATaGGCCCAAATACACATTTCCTCCTTTAAAATTTATTATCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: SPKGIDHMSGCGLKP*AQIHISSFKIYYLR Trigger: CCTGAGATAATAAATTTTAAAGGAGGAAATGTGTATTTGGGCTCATGGTTTCAGTCCACAGCCACTCATGTGGTCTATTCCTTTTGGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR TCA 90 bp | TTCACCATTATAAGCTTGAGTAAATGTGTCCTTTTGGTGACACCATaGAGTCACAGTTGTGGCCAAGTTAGAATCCTAATGCCCTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: FTIISLSKCVLLVTP*SHSCGQVRILMPCL Trigger: CAAACAGGGCATTAGGATTCTAACTTGGCCACAACTGTGACTTCATGGTGTCACCAAAAGGACACATTTACTCAAGCTTATAATGGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
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| 3UTR CCA 90 bp | CCACAAAGATTTCAGAGGTTATCAGCTCTCAAACTGGCAATATGTTaGAAACAAGAGTGTGAAGCTGAATCTAAAATGGAGACCCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: PQRFQRLSALKLAIC*KQECEAESKMETPE Trigger: TTCTGGGGTCTCCATTTTAGATTCAGCTTCACACTCTTGTTTCCAACATATTGCCAGTTTGAGAGCTGATAACCTCTGAAATCTTTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR CCA 90 bp | AATGCCGATTTTACAGACATGCAAAGTGAAAGAGTTGTGGAGTCCTaGAGTTTTCCACAAAGATTTCAGAGGTTATCAGCTCTCAAACTG | + |
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Preference number: 1 (lower is better) Translates to: NADFTDMQSERVVES*SFPQRFQRLSALKL Trigger: CAGTTTGAGAGCTGATAACCTCTGAAATCTTTGTGGAAAACTCCAGGACTCCACAACTCTTTCACTTTGCATGTCTGTAAAATCGGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR CCA 90 bp | ATCCACATAATGCCGATTTTACAGACATGCAAAGTGAAAGAGTTGTaGAGTCCTGGAGTTTTCCACAAAGATTTCAGAGGTTATCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: IHIMPILQTCKVKEL*SPGVFHKDFRGYQL Trigger: GAGCTGATAACCTCTGAAATCTTTGTGGAAAACTCCAGGACTCCACAACTCTTTCACTTTGCATGTCTGTAAAATCGGCATTATGTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR CAA 90 bp | CTGCATGCAGTCAGCGAGTCTGTAGGAGCAGGACTGCCTGCGCCCTaGAGATTTCACATACTGCCACTGTGGGCGCCAGAGGCCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: LHAVSESVGAGLPAP*RFHILPLWAPEARC Trigger: ACATCTGGCCTCTGGCGCCCACAGTGGCAGTATGTGAAATCTCAAGGGCGCAGGCAGTCCTGCTCCTACAGACTCGCTGACTGCATGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR GCA 90 bp | CCACTACAGAGGAAGCTGAGACAGTATAATTGTGAGTTCAAGGCCAGCCTGGACGCAAGTCCCCTTAATTaGTGGGCAATCTGCCCCACC | + |
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Preference number: 2 (lower is better) Translates to: PLQRKLRQYNCEFKASLDASPLN*WAICPT Trigger: GGTGGGGCAGATTGCCCAGCAATTAAGGGGACTTGC...GTCCAGGCTGGCCTTGAACTCACAATTATACTGTCTCAGCTTCCTCTGTAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
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| 3UTR CAA 90 bp | GCTACTCAGAGGTGTGGAACCTCTAAGAAGAAAGGAGCTTGGTCATaGGGAGTGCGTCCTTCTTGGAAAAACAGGAGCCCAGCTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: ATQRCGTSKKKGAWS*GVRPSWKNRSPASS Trigger: GGAAGAAGCTGGGCTCCTGTTTTTCCAAGAAGGACGCACTCCCAATGACCAAGCTCCTTTCTTCTTAGAGGTTCCACACCTCTGAGTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR TCA 90 bp | CAGACATGCAAAGTGAAAGAGTTGTGGAGTCCTGGAGTTTTCCACAAAGATTTCCTGTGGAGTGCCTGCTaGGGAGAGCTGTGTGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: QTCKVKELWSPGVFHKDFLWSAC*GELCEV Trigger: TACCTCACACAGCTCTCCTCAGCAGGCACTCCACAG...GAAATCTTTGTGGAAAACTCCAGGACTCCACAACTCTTTCACTTTGCATGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR TCA 90 bp | CAATACTGTGAAGGTGCCTCAAGAATTATTCAGACTTGTGCCTGTGCAAGCTCACCAGAAAGCAAGGGGTaGCAAACTGTGGAGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QYCEGASRIIQTCACASSPESKG*QTVECL Trigger: CAGGCACTCCACAGTTTGTCACCCCTTGCTTTCTGG...TGAGCTTGCACAGGCACAAGTCTGAATAATTCTTGAGGCACCTTCACAGTATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR GCA 90 bp | AGAAAATGTTGCCCTGAAGCTCCTTCCTCATCTGCAGATACTCGGGTAGGCCATGCCAGATGTCTGCCCTaGTTAGTTTTGCTCTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: RKCCPEAPSSSADTRVGHARCLP*LVLLLL Trigger: AAGCAAGAGCAAAACTAAGCAGGGCAGACATCTGGC...ATGGCCTACCCGAGTATCTGCAGATGAGGAAGGAGCTTCAGGGCAACATTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR CCA 90 bp | AGAAAATGTTGCCCTGAAGCTCCTTCCTCATCTGCAGATACTCGGGTAGGCCATAGTGTATCAAAGGTTTaGTCACCAGCCTACTCGGTG | + |
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Preference number: 2 (lower is better) Translates to: RKCCPEAPSSSADTRVGHSVSKV*SPAYSV Trigger: CACCGAGTAGGCTGGTGACCAAACCTTTGATACACT...ATGGCCTACCCGAGTATCTGCAGATGAGGAAGGAGCTTCAGGGCAACATTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR GCA 90 bp | CAATACTGTGAAGGTGCCTCAAGAATTATTCAGACTTGTGCCTGTGCAAGCTCAAGGAGCAGGACTGCCTaGGCCCTTGAGATTTCACAT | + |
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Preference number: 2 (lower is better) Translates to: QYCEGASRIIQTCACASSRSRTA*ALEISH Trigger: ATGTGAAATCTCAAGGGCGCAGGCAGTCCTGCTCCT...TGAGCTTGCACAGGCACAAGTCTGAATAATTCTTGAGGCACCTTCACAGTATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGGAACCAAGATTCCAGAAACACTCGCCCTTTCAGCCACGTGGTGACGCATCAGGGTATGATATGTaGGGTTTAGCAGCAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: QREPRFQKHSPFQPRGDASGYDM*GLAATK Trigger: TTTTGTTGCTGCTAAACCCCACATATCATACCCTGA...TGCGTCACCACGTGGCTGAAAGGGCGAGTGTTTCTGGAATCTTGGTTCCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTGGAAAAACAGGAGCCCAGCTTCTTCCCCATTCTTTCTGCTTCCAGGCTGACGCACTGGAAGGTATaGTTTATGAAGAAGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: FLEKQEPSFFPILSASRLTHWKV*FMKKTP Trigger: AGGAGTCTTCTTCATAAAGCATACCTTCCAGTGCGT...CAGCCTGGAAGCAGAAAGAATGGGGAAGAAGCTGGGCTCCTGTTTTTCCAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR CCA 90 bp | GGTCATGAGGTCATGAGGGCATGCCTTGACAAAGGGAACCAAGATTCCAGAAACGTTGTCCAGTGTTTGTaGTCTTGTGGTTTTGAGACA | + |
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Preference number: 2 (lower is better) Translates to: GHEVMRACLDKGNQDSRNVVQCL*SCGFET Trigger: TGTCTCAAAACCACAAGACCACAAACACTGGACAAC...GTTTCTGGAATCTTGGTTCCCTTTGTCAAGGCATGCCCTCATGACCTCATGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
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| 3UTR-3UTR CCA 90 bp | CACATAATGCCGATTTTACAGACATGCAAAGTGAAAGAGTTGTGGAGTCCTGGAGGAGTGCGTCCTTCTTaGAAAAACAGGAGCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: HIMPILQTCKVKELWSPGGVRPS*KNRSPA Trigger: AGCTGGGCTCCTGTTTTTCCAAGAAGGACGCACTCC...TCCAGGACTCCACAACTCTTTCACTTTGCATGTCTGTAAAATCGGCATTATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR CCA 90 bp | AGAAAATGTTGCCCTGAAGCTCCTTCCTCATCTGCAGATACTCGGGTAGGCCATAAAGTGAAAGAGTTGTaGAGTCCTGGAGTTTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: RKCCPEAPSSSADTRVGHKVKEL*SPGVFH Trigger: GTGGAAAACTCCAGGACTCCACAACTCTTTCACTTT...ATGGCCTACCCGAGTATCTGCAGATGAGGAAGGAGCTTCAGGGCAACATTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCATCTCTTATATCTCAATCACTGTTGAGATATTTGTAAGCCAACAAACTATCCTAGGGTCTGGATaGCTCCCTGCAGCTCGCGTG | + |
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Preference number: 2 (lower is better) Translates to: SLISYISITVEIFVSQQTILGSG*LPAARV Trigger: CACGCGAGCTGCAGGGAGTCATCCAGACCCTAGGAT...AGTTTGTTGGCTTACAAATATCTCAACAGTGATTGAGATATAAGAGATGAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTGGAGTCCTGGAGTTTTCCACAAAGATTTCAGAGGTTATCAGCTCTCAAACTTGAGAAAGTGCCCTTaGATCAGCACAGGTGAGCGA | + |
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Preference number: 2 (lower is better) Translates to: LWSPGVFHKDFRGYQLSNLRKCP*ISTGER Trigger: TCGCTCACCTGTGCTGATGCAAGGGCACTTTCTCAA...GTTTGAGAGCTGATAACCTCTGAAATCTTTGTGGAAAACTCCAGGACTCCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGGAACCAAGATTCCAGAAACACTCGCCCTTTCAGCCACGTGGTGACGCAACTTCAAGTAGTTTATaGGCTGAACAAATGAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: QREPRFQKHSPFQPRGDATSSSL*AEQMSS Trigger: AGAACTCATTTGTTCAGCCCATAAACTACTTGAAGT...TGCGTCACCACGTGGCTGAAAGGGCGAGTGTTTCTGGAATCTTGGTTCCCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCATGAGGTCATGAGGGCATGCCTTGACAAAGGGAACCAAGATTCCAGAAACTCAGGGTATGATATGTaGGGTTTAGCAGCAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: GHEVMRACLDKGNQDSRNSGYDM*GLAATK Trigger: TTTTGTTGCTGCTAAACCCCACATATCATACCCTGA...GTTTCTGGAATCTTGGTTCCCTTTGTCAAGGCATGCCCTCATGACCTCATGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
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| 3UTR-3UTR TCA 90 bp | CACATAATGCCGATTTTACAGACATGCAAAGTGAAAGAGTTGTGGAGTCCTGGAGTGGTCTTGTGGTTTTaGGACAGTGTTTCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: HIMPILQTCKVKELWSPGVVLWF*DSVSLC Trigger: GCAGAGTGAAACACTGTCTCAAAACCACAAGACCAC...TCCAGGACTCCACAACTCTTTCACTTTGCATGTCTGTAAAATCGGCATTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR TCA 90 bp | TCAAATAGCTTCTCAAGCATAACTAATTTTGACAACGTCCTGCATTCTGGGTGCCATGAGGGCATGCCTTaGCAAAGGGAACCAAGATTC | + |
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Preference number: 2 (lower is better) Translates to: SNSFSSITNFDNVLHSGCHEGMP*QREPRF Trigger: GAATCTTGGTTCCCTTTGTCAAGGCATGCCCTCATG...GCACCCAGAATGCAGGACGTTGTCAAAATTAGTTATGCTTGAGAAGCTATTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
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| 3UTR-3UTR TCA 90 bp | CAATACTGTGAAGGTGCCTCAAGAATTATTCAGACTTGTGCCTGTGCAAGCTCATGTGGACTGAAACCATaGGCCCAAATACACATTTCC | + |
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Preference number: 2 (lower is better) Translates to: QYCEGASRIIQTCACASSCGLKP*AQIHIS Trigger: GGAAATGTGTATTTGGGCTCATGGTTTCAGTCCACA...TGAGCTTGCACAGGCACAAGTCTGAATAATTCTTGAGGCACCTTCACAGTATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR TCA 90 bp | AGAAAATGTTGCCCTGAAGCTCCTTCCTCATCTGCAGATACTCGGGTAGGCCATGTTTTGCTCTTGCTTTaGTCTGATCTTTTCTACACA | + |
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Preference number: 2 (lower is better) Translates to: RKCCPEAPSSSADTRVGHVLLLL*SDLFYT Trigger: TGTGTAGAAAAGATCAGATCAAAGCAAGAGCAAAAC...ATGGCCTACCCGAGTATCTGCAGATGAGGAAGGAGCTTCAGGGCAACATTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR TCA 90 bp | CAGACATGCAAAGTGAAAGAGTTGTGGAGTCCTGGAGTTTTCCACAAAGATTTCCTTCTCTGCCGAGTTTaGCATGGACTATGGAACAAT | + |
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Preference number: 2 (lower is better) Translates to: QTCKVKELWSPGVFHKDFLLCRV*HGLWNN Trigger: ATTGTTCCATAGTCCATGTCAAACTCGGCAGAGAAG...GAAATCTTTGTGGAAAACTCCAGGACTCCACAACTCTTTCACTTTGCATGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGGTTGCTTCAGCAGACTCCTTGATGTCAATACTTTTAATATCAATGCTGACAATGACACAGTCCTaGAATCCCACTACAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LRVASADSLMSILLISMLTMTQS*NPTTEE Trigger: TTCCTCTGTAGTGGGATTCCAGGACTGTGTCATTGT...CAGCATTGATATTAAAAGTATTGACATCAAGGAGTCTGCTGAAGCAACCCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
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| 3UTR CAA 90 bp | GAGGTGAATGTCATTGATGAATCAGACACTTCTTACTATGAAGTATaGTCTCATCACAAGCCCAAAAGGAATAGACCACATGAGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: EVNVIDESDTSYYEV*SHHKPKRNRPHEWL Trigger: CAGCCACTCATGTGGTCTATTCCTTTTGGGCTTGTGATGAGACAATACTTCATAGTAAGAAGTGTCTGATTCATCAATGACATTCACCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR TCA 90 bp | TCAAATAGCTTCTCAAGCATAACTAATTTTGACAACGTCCTGCATTCTGGGTGCTCTGACTCTACCTCTTaGGTGCTGGGATTAAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: SNSFSSITNFDNVLHSGCSDSTS*VLGLKS Trigger: ACTTTTTAATCCCAGCACTCAAGAGGTAGAGTCAGA...GCACCCAGAATGCAGGACGTTGTCAAAATTAGTTATGCTTGAGAAGCTATTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGGTTGCTTCAGCAGACTCCTTGATGTCAATACTTTTAATATCAATGCTGCACTACAGAGGAAGCTaGGACAGTATAATTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LRVASADSLMSILLISMLHYRGS*DSIIVS Trigger: ACTCACAATTATACTGTCTCAGCTTCCTCTGTAGTG...CAGCATTGATATTAAAAGTATTGACATCAAGGAGTCTGCTGAAGCAACCCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
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| 3UTR CAA 90 bp | ATCATCCACATAATGCCGATTTTACAGACATGCAAAGTGAAAGAGTaGTGGAGTCCTGGAGTTTTCCACAAAGATTTCAGAGGTTATCAG | + |
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Preference number: 2 (lower is better) Translates to: IIHIMPILQTCKVKE*WSPGVFHKDFRGYQ Trigger: CTGATAACCTCTGAAATCTTTGTGGAAAACTCCAGGACTCCACAACTCTTTCACTTTGCATGTCTGTAAAATCGGCATTATGTGGATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCATCTCTTATATCTCAATCACTGTTGAGATATTTGTAAGCCAACAAACTTCACATCTCAGGGTATaGTATGTGGGGTTTAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLISYISITVEIFVSQQTSHLRV*YVGFSS Trigger: GCTGCTAAACCCCACATATCATACCCTGAGATGTGA...AGTTTGTTGGCTTACAAATATCTCAACAGTGATTGAGATATAAGAGATGAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTCATCTCTTATATCTCAATCACTGTTGAGATATTTGTAAGCCAACAAACTGTGGTCTTGTGGTTTTaGGACAGTGTTTCACTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLISYISITVEIFVSQQTVVLWF*DSVSLC Trigger: GCAGAGTGAAACACTGTCTCAAAACCACAAGACCAC...AGTTTGTTGGCTTACAAATATCTCAACAGTGATTGAGATATAAGAGATGAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTCAATTCGTTCAAATAGCTTCTCAAGCATAACTAATTTTGACAACGTCCTGTCTGACTCTACCTCTTaGGTGCTGGGATTAAAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NSIRSNSFSSITNFDNVLSDSTS*VLGLKS Trigger: ACTTTTTAATCCCAGCACTCAAGAGGTAGAGTCAGA...CAGGACGTTGTCAAAATTAGTTATGCTTGAGAAGCTATTTGAACGAATTGAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| 3UTR-3UTR GCA 90 bp | AACTCAATTCGTTCAAATAGCTTCTCAAGCATAACTAATTTTGACAACGTCCTGACGCACTGGAAGGTATaGTTTATGAAGAAGACTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NSIRSNSFSSITNFDNVLTHWKV*FMKKTP Trigger: AGGAGTCTTCTTCATAAAGCATACCTTCCAGTGCGT...CAGGACGTTGTCAAAATTAGTTATGCTTGAGAAGCTATTTGAACGAATTGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCAAACTGGCAATATGTTGGAAACAAGAGTGTGAAGCTGAATCTAAAATGGACTTCAAGTAGTTTATaGGCTGAACAAATGAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LSNWQYVGNKSVKLNLKWTSSSL*AEQMSS Trigger: AGAACTCATTTGTTCAGCCCATAAACTACTTGAAGT...CCATTTTAGATTCAGCTTCACACTCTTGTTTCCAACATATTGCCAGTTTGAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR CCA 72 bp | CTGCCTGCGCCCTTGAGATTTCACATACTGCCACTGTaGGCGCCAGAGGCCAGATGTCTGCCCTGCTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LPAPLRFHILPL*APEARCLPCLV Trigger: AACTAAGCAGGGCAGACATCTGGCCTCTGGCGCCCACAGTGGCAGTATGTGAAATCTCAAGGGCGCAGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR TCA 72 bp | CAGAAAGCAAGGGGTGACAAACTGTGGAGTGCCTGCTaGGGAGAGCTGTGTGAGGTAAGTTCAGCCAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: QKARGDKLWSAC*GELCEVSSASP Trigger: AGGGCTGGCTGAACTTACCTCACACAGCTCTCCTCAGCAGGCACTCCACAGTTTGTCACCCCTTGCTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR GCA 72 bp | CGCCCTTTCAGCCACGTGGTGACGCACTGGAAGGTATaGTTTATGAAGAAGACTCCTCCCCAGATAGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: RPFSHVVTHWKV*FMKKTPPQIVL Trigger: CAAGACTATCTGGGGAGGAGTCTTCTTCATAAAGCATACCTTCCAGTGCGTCACCACGTGGCTGAAAGGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| 3UTR CCA 72 bp | TTGAGACAGTGTTTCACTCTGCAGCCATGGTTGGGCTaGGGCTCACTAACTAAACCAGGCTGGCCTGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: LRQCFTLQPWLG*GSLTKPGWPGI Trigger: AATTCCAGGCCAGCCTGGTTTAGTTAGTGAGCCCCAGCCCAACCATGGCTGCAGAGTGAAACACTGTCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| 3UTR TCA 72 bp | CTACCGTGCAATGCTGTTTGGGAGGTCATGAGGTCATaGGGGCATGCCTTGACAAAGGGAACCAAGATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPCNAVWEVMRS*GHALTKGTKIP Trigger: TGGAATCTTGGTTCCCTTTGTCAAGGCATGCCCTCATGACCTCATGACCTCCCAAACAGCATTGCACGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| 3UTR CCA 72 bp | GGTGTGGAACCTCTAAGAAGAAAGGAGCTTGGTCATTaGGAGTGCGTCCTTCTTGGAAAAACAGGAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GVEPLRRKELGH*ECVLLGKTGAQ Trigger: CTGGGCTCCTGTTTTTCCAAGAAGGACGCACTCCCAATGACCAAGCTCCTTTCTTCTTAGAGGTTCCACACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR-3UTR CAA 90 bp | GGAATCCCACTACAGAGGAAGCTGAGACAGTATAATTGTGAGTTCAAGGCCAGCGACCAAAGGAGGGTGTaGGATTCCCCAGAAGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GIPLQRKLRQYNCEFKASDQRRV*DSPEVE Trigger: CTCTACTTCTGGGGAATCCAACACCCTCCTTTGGTC...GCTGGCCTTGAACTCACAATTATACTGTCTCAGCTTCCTCTGTAGTGGGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| 3UTR GCA 72 bp | GGACAGCCTCCTTCCATAAGGCAATCTAGAAAATGTTaGCCTGAAGCTCCTTCCTCATCTGCAGATACTCGG | + |
|
Preference number: 3 (lower is better) Translates to: GQPPSIRQSRKC*PEAPSSSADTR Trigger: CCGAGTATCTGCAGATGAGGAAGGAGCTTCAGGGCAACATTTTCTAGATTGCCTTATGGAAGGAGGCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR TCA 72 bp | TACCCAAGGGCATCTAACTGGTCTGAACACAGCTTCTaGCTCAAGGCTAATCTCTCTCTCTCTCTCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: YPRASNWSEHSF*LKANLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGATTAGCCTTGAGTCAGAAGCTGTGTTCAGACCAGTTAGATGCCCTTGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| 3UTR TCA 72 bp | AATGACACAGTCCTGGAATCCCACTACAGAGGAAGCTaGGACAGTATAATTGTGAGTTCAAGGCCAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NDTVLESHYRGS*DSIIVSSRPAW Trigger: CCAGGCTGGCCTTGAACTCACAATTATACTGTCTCAGCTTCCTCTGTAGTGGGATTCCAGGACTGTGTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| 3UTR GCA 72 bp | CAATGCTGTTTGGGAGGTCATGAGGTCATGAGGGCATaGCTTGACAAAGGGAACCAAGATTCCAGAAACACT | + |
|
Preference number: 3 (lower is better) Translates to: QCCLGGHEVMRA*LDKGNQDSRNT Trigger: AGTGTTTCTGGAATCTTGGTTCCCTTTGTCAAGGCATGCCCTCATGACCTCATGACCTCCCAAACAGCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| 3UTR GCA 72 bp | GAACCTCTAAGAAGAAAGGAGCTTGGTCATTGGGAGTaGGTCCTTCTTGGAAAAACAGGAGCCCAGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: EPLRRKELGHWE*VLLGKTGAQLL Trigger: AAGAAGCTGGGCTCCTGTTTTTCCAAGAAGGACGCACTCCCAATGACCAAGCTCCTTTCTTCTTAGAGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR CCA 72 bp | ACTCAGAGGTGTGGAACCTCTAAGAAGAAAGGAGCTTaGTCATTGGGAGTGCGTCCTTCTTGGAAAAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: TQRCGTSKKKGA*SLGVRPSWKNR Trigger: CCTGTTTTTCCAAGAAGGACGCACTCCCAATGACCAAGCTCCTTTCTTCTTAGAGGTTCCACACCTCTGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR-3UTR CAA 90 bp | CATCTGAAAAATGGGGGTAAAGACAGTGCAGTCTCAGGGTTGCTTCAGCAGACTTGTGTGTGTGTTCATTaGAGGAGACCAAAGGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: HLKNGGKDSAVSGLLQQTCVCVH*RRPKEG Trigger: ACCCTCCTTTGGTCTCCTCAAATGAACACACACACA...AGTCTGCTGAAGCAACCCTGAGACTGCACTGTCTTTACCCCCATTTTTCAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCAAACTGGCAATATGTTGGAAACAAGAGTGTGAAGCTGAATCTAAAATGGACTCTGCAGCCATGGTaGGGCTGGGGCTCACTAACT | + |
|
Preference number: 3 (lower is better) Translates to: LSNWQYVGNKSVKLNLKWTLQPW*GWGSLT Trigger: AGTTAGTGAGCCCCAGCCCAACCATGGCTGCAGAGT...CCATTTTAGATTCAGCTTCACACTCTTGTTTCCAACATATTGCCAGTTTGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR GCA 72 bp | ATAAGTCTTTGGAAGCCAGGCCACATTCTGAGTAAGTaGCAAAGGCCAGTGTATCAAAGGTTTGGTCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: ISLWKPGHILSK*QRPVYQRFGHQ Trigger: CTGGTGACCAAACCTTTGATACACTGGCCTTTGGCACTTACTCAGAATGTGGCCTGGCTTCCAAAGACTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR CCA 72 bp | CACAAGCCCAAAAGGAATAGACCACATGAGTGGCTGTaGACTGAAACCATGAGCCCAAATACACATTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HKPKRNRPHEWL*TETMSPNTHFL Trigger: GAGGAAATGTGTATTTGGGCTCATGGTTTCAGTCCACAGCCACTCATGTGGTCTATTCCTTTTGGGCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR TCA 72 bp | TTCACAGAGATCCAACCTGCCTCTGACTCTACCTCTTaGGTGCTGGGATTAAAAAGTCTTTCAGGGCTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FTEIQPASDSTS*VLGLKSLSGLY Trigger: ATAGAGCCCTGAAAGACTTTTTAATCCCAGCACTCAAGAGGTAGAGTCAGAGGCAGGTTGGATCTCTGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| 3UTR CCA 72 bp | TCTCATCACAAGCCCAAAAGGAATAGACCACATGAGTaGCTGTGGACTGAAACCATGAGCCCAAATACACAT | + |
|
Preference number: 3 (lower is better) Translates to: SHHKPKRNRPHE*LWTETMSPNTH Trigger: ATGTGTATTTGGGCTCATGGTTTCAGTCCACAGCCACTCATGTGGTCTATTCCTTTTGGGCTTGTGATGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR TCA 72 bp | GCCAGATGTCTGCCCTGCTTAGTTTTGCTCTTGCTTTaGTCTGATCTTTTCTACACATCTGTGCTCCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ARCLPCLVLLLL*SDLFYTSVLLC Trigger: ACAAAGGAGCACAGATGTGTAGAAAAGATCAGATCAAAGCAAGAGCAAAACTAAGCAGGGCAGACATCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR TCA 72 bp | GCAAATTTCATCTCCCTTGGTATCAATGTCCTCATCTaGAAAATGGGGGTAAAGACAGTGCAGTCTCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ANFISLGINVLI*KMGVKTVQSQG Trigger: ACCCTGAGACTGCACTGTCTTTACCCCCATTTTTCAGATGAGGACATTGATACCAAGGGAGATGAAATTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| 3UTR TCA 72 bp | CTTCCCCATTCTTTCTGCTTCCAGGCTGCTTTGAGGTaGATGTCATTGATGAATCAGACACTTCTTACTATG | + |
|
Preference number: 3 (lower is better) Translates to: LPHSFCFQAALR*MSLMNQTLLTM Trigger: CATAGTAAGAAGTGTCTGATTCATCAATGACATTCACCTCAAAGCAGCCTGGAAGCAGAAAGAATGGGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR TCA 72 bp | AAGTCAAGTGCTTGGCACCAGGTTAATACAATACTGTaGAGGTGCCTCAAGAATTATTCAGACTTGTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KSSAWHQVNTIL*RCLKNYSDLCL Trigger: CAGGCACAAGTCTGAATAATTCTTGAGGCACCTTCACAGTATTGTATTAACCTGGTGCCAAGCACTTGACTT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCTACCTCTTGAGTGCTGGGATTAAAAAGTCTTTCAGGGCTCTATGGGATGTTTTAGCAGCAACAAAATaGAGGTGGAAGCCTTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LYLLSAGIKKSFRALWDVLAATK*RWKPLK Trigger: TTTCAAAGGCTTCCACCTCAATTTTGTTGCTGCTAA...AACATCCCATAGAGCCCTGAAAGACTTTTTAATCCCAGCACTCAAGAGGTAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| 3UTR CCA 72 bp | ATGCCGATTTTACAGACATGCAAAGTGAAAGAGTTGTaGAGTCCTGGAGTTTTCCACAAAGATTTCAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: MPILQTCKVKEL*SPGVFHKDFRG Trigger: ACCTCTGAAATCTTTGTGGAAAACTCCAGGACTCCACAACTCTTTCACTTTGCATGTCTGTAAAATCGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR TCA 72 bp | ACTTTAGTTTTAATCAAGCCCTGCTCCTTTCTAGTCTaGGCAAATTTCATCTCCCTTGGTATCAATGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TLVLIKPCSFLV*ANFISLGINVL Trigger: GAGGACATTGATACCAAGGGAGATGAAATTTGCTCAGACTAGAAAGGAGCAGGGCTTGATTAAAACTAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| 3UTR TCA 72 bp | ATAAGCTTGAGTAAATGTGTCCTTTTGGTGACACCATaGAGTCACAGTTGTGGCCAAGTTAGAATCCTAATG | + |
|
Preference number: 3 (lower is better) Translates to: ISLSKCVLLVTP*SHSCGQVRILM Trigger: CATTAGGATTCTAACTTGGCCACAACTGTGACTTCATGGTGTCACCAAAAGGACACATTTACTCAAGCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| 3UTR CCA 72 bp | TTTCAGAGGTTATCAGCTCTCAAACTGGCAATATGTTaGAAACAAGAGTGTGAAGCTGAATCTAAAATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: FQRLSALKLAIC*KQECEAESKME Trigger: CTCCATTTTAGATTCAGCTTCACACTCTTGTTTCCAACATATTGCCAGTTTGAGAGCTGATAACCTCTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR CCA 72 bp | TTCCACAAAGATTTCAGAGGTTATCAGCTCTCAAACTaGCAATATGTTGGAAACAAGAGTGTGAAGCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FHKDFRGYQLSN*QYVGNKSVKLN Trigger: ATTCAGCTTCACACTCTTGTTTCCAACATATTGCCAGTTTGAGAGCTGATAACCTCTGAAATCTTTGTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR TCA 72 bp | CAGGGCTCTATGGGATGTTTTTCTAAATTAGCAACTTaGACAGACTATGGTAGTTTACTAACAATGAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QGSMGCFSKLAT*TDYGSLLTMSV Trigger: CACACTCATTGTTAGTAAACTACCATAGTCTGTTCAAGTTGCTAATTTAGAAAAACATCCCATAGAGCCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| 3UTR TCA 72 bp | GCATTTATAATCTTTTTACAGCTTCTCTGCCGAGTTTaGCATGGACTATGGAACAATTCTGAAGCAGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: AFIIFLQLLCRV*HGLWNNSEAVK Trigger: CTTAACTGCTTCAGAATTGTTCCATAGTCCATGTCAAACTCGGCAGAGAAGCTGTAAAAAGATTATAAATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTCATCTCTTATATCTCAATCACTGTTGAGATATTTGTAAGCCAACAAACTATGAGCCACAGTGAATaGCAATTGTCAGGTTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: SLISYISITVEIFVSQQTMSHSE*QLSGFI Trigger: AATAAAACCTGACAATTGCAATTCACTGTGGCTCAT...AGTTTGTTGGCTTACAAATATCTCAACAGTGATTGAGATATAAGAGATGAGGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGGCTATTGAGAAAGTGCCCTTGCATCAGCACAGGTGAGCGAGCCTTGGCGGCACCAGCATCAGCATaGACAGCGGCGGCGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGLLRKCPCISTGERALAAPASA*TAAAGA Trigger: TGCCCCCGCCGCCGCTGTCCATGCTGATGCTGGTGC...CGCCAAGGCTCGCTCACCTGTGCTGATGCAAGGGCACTTTCTCAATAGCCCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CCA 90 bp | GGTCATGAGGTCATGAGGGCATGCCTTGACAAAGGGAACCAAGATTCCAGAAACGCACCAGCATCAGCATaGACAGCGGCGGCGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GHEVMRACLDKGNQDSRNAPASA*TAAAGA Trigger: TGCCCCCGCCGCCGCTGTCCATGCTGATGCTGGTGC...GTTTCTGGAATCTTGGTTCCCTTTGTCAAGGCATGCCCTCATGACCTCATGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGAAAAATGGGGGTAAAGACAGTGCAGTCTCAGGGTTGCTTCAGCAGACTCGAGGCGCTGGCCACTaGCAGCAGCATCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLKNGGKDSAVSGLLQQTRGAGH*QQHQHQ Trigger: CTGGTGCTGATGCTGCTGCCAGTGGCCAGCGCCTCG...AGTCTGCTGAAGCAACCCTGAGACTGCACTGTCTTTACCCCCATTTTTCAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR TCA 90 bp | GTGGGGCTATTGAGAAAGTGCCCTTGCATCAGCACAGGTGAGCGAGCCTTGGCGCACATCGATTTTGCATaGGCTCTTAAAGATGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VGLLRKCPCISTGERALAHIDFA*ALKDGR Trigger: CCGGCCATCTTTAAGAGCTCATGCAAAATCGATGTG...CGCCAAGGCTCGCTCACCTGTGCTGATGCAAGGGCACTTTCTCAATAGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR GCA 90 bp | CCACTACAGAGGAAGCTGAGACAGTATAATTGTGAGTTCAAGGCCAGCCTGGACAGAGGAGCACGGAGATaGAGAGCGTCACCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLQRKLRQYNCEFKASLDRGARR*RASPSP Trigger: GGGAGAAGGTGACGCTCTGCATCTCCGTGCTCCTCT...GTCCAGGCTGGCCTTGAACTCACAATTATACTGTCTCAGCTTCCTCTGTAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR TCA 90 bp | AAAGGGAACCAAGATTCCAGAAACACTCGCCCTTTCAGCCACGTGGTGACGCACTCCACCTTCACCAGCTaGGACATAGACACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KGNQDSRNTRPFSHVVTHSTFTS*DIDTSN Trigger: GTTTGAGGTGTCTATGTCTCAGCTGGTGAAGGTGGA...GTGCGTCACCACGTGGCTGAAAGGGCGAGTGTTTCTGGAATCTTGGTTCCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR TCA 90 bp | GGTCATGAGGTCATGAGGGCATGCCTTGACAAAGGGAACCAAGATTCCAGAAACAAGGGATGGTCTCGGTaGTCACGAGGAGAAAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: GHEVMRACLDKGNQDSRNKGWSR*SRGERP Trigger: CGGTCTTTCTCCTCGTGATCACCGAGACCATCCCTT...GTTTCTGGAATCTTGGTTCCCTTTGTCAAGGCATGCCCTCATGACCTCATGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR TCA 90 bp | GGAATCCCACTACAGAGGAAGCTGAGACAGTATAATTGTGAGTTCAAGGCCAGCAAGGGATGGTCTCGGTaGTCACGAGGAGAAAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: GIPLQRKLRQYNCEFKASKGWSR*SRGERP Trigger: CGGTCTTTCTCCTCGTGATCACCGAGACCATCCCTT...GCTGGCCTTGAACTCACAATTATACTGTCTCAGCTTCCTCTGTAGTGGGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR GCA 90 bp | AAAGGGAACCAAGATTCCAGAAACACTCGCCCTTTCAGCCACGTGGTGACGCACTTTCCAGATCTTCTCTaGAGGGACTCGCATGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: KGNQDSRNTRPFSHVVTHFPDLL*RDSHEL Trigger: GAGTTCATGCGAGTCCCTGCAGAGAAGATCTGGAAA...GTGCGTCACCACGTGGCTGAAAGGGCGAGTGTTTCTGGAATCTTGGTTCCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR GCA 90 bp | GGTCATGAGGTCATGAGGGCATGCCTTGACAAAGGGAACCAAGATTCCAGAAACAGGGGTAGCCTTCCTTaGAGCTTTTGGAGTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GHEVMRACLDKGNQDSRNRGSLP*SFWSLH Trigger: GTGCAGACTCCAAAAGCTGCAAGGAAGGCTACCCCT...GTTTCTGGAATCTTGGTTCCCTTTGTCAAGGCATGCCCTCATGACCTCATGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAATGTTGCCCTGAAGCTCCTTCCTCATCTGCAGATACTCGGGTAGGCCATTGGGCATCGTGTGTGTaGTCGGAGTTCTGTAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKCCPEAPSSSADTRVGHWASCV*SEFCSA Trigger: TGCACTACAGAACTCCGACCACACACACGATGCCCA...ATGGCCTACCCGAGTATCTGCAGATGAGGAAGGAGCTTCAGGGCAACATTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR CCA 90 bp | CAAAGGGAACCAAGATTCCAGAAACACTCGCCCTTTCAGCCACGTGGTGACGCAGTAAAGCACGATGTCTaGTTTCCAGATCTTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QREPRFQKHSPFQPRGDAVKHDV*FPDLLC Trigger: GCAGAGAAGATCTGGAAACCAGACATCGTGCTTTAC...TGCGTCACCACGTGGCTGAAAGGGCGAGTGTTTCTGGAATCTTGGTTCCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGGAACCAAGATTCCAGAAACACTCGCCCTTTCAGCCACGTGGTGACGCACAGGAGCCGAACTTCATaGTGCAGTTTTGGTAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KGNQDSRNTRPFSHVVTHRSRTS*CSFGSQ Trigger: TTGACTACCAAAACTGCACCATGAAGTTCGGCTCCT...GTGCGTCACCACGTGGCTGAAAGGGCGAGTGTTTCTGGAATCTTGGTTCCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| 3UTR CAA 72 bp | GAAGAAAGGAGCTTGGTCATTGGGAGTGCGTCCTTCTaGGAAAAACAGGAGCCCAGCTTCTTCCCCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EERSLVIGSASF*EKQEPSFFPIL Trigger: AAGAATGGGGAAGAAGCTGGGCTCCTGTTTTTCCAAGAAGGACGCACTCCCAATGACCAAGCTCCTTTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR CAA 72 bp | AGGTGTGGAACCTCTAAGAAGAAAGGAGCTTGGTCATaGGGAGTGCGTCCTTCTTGGAAAAACAGGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RCGTSKKKGAWS*GVRPSWKNRSP Trigger: TGGGCTCCTGTTTTTCCAAGAAGGACGCACTCCCAATGACCAAGCTCCTTTCTTCTTAGAGGTTCCACACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| 3UTR CAA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATTaGAGGAGACCAAAGGAGGGTGTTGGATTCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVH*RRPKEGVGFPR Trigger: TCTGGGGAATCCAACACCCTCCTTTGGTCTCCTCAAATGAACACACACACACACACACACACACACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR TCA 90 bp | AAAATGGGGGTAAAGACAGTGCAGTCTCAGGGTTGCTTCAGCAGACTCCTTGATTCCACCTTCACCAGCTaGGACATAGACACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KMGVKTVQSQGCFSRLLDSTFTS*DIDTSN Trigger: GTTTGAGGTGTCTATGTCTCAGCTGGTGAAGGTGGA...ATCAAGGAGTCTGCTGAAGCAACCCTGAGACTGCACTGTCTTTACCCCCATTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR TCA 90 bp | GCTACTCAGAGGTGTGGAACCTCTAAGAAGAAAGGAGCTTGGTCATTGGGAGTGTTTCCCAATAGTCCTTaGGGTTCATGGAGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ATQRCGTSKKKGAWSLGVFPNSP*GSWRSQ Trigger: TTGGCTCCTCCATGAACCTCAAGGACTATTGGGAAA...CACTCCCAATGACCAAGCTCCTTTCTTCTTAGAGGTTCCACACCTCTGAGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR GCA 90 bp | CACATAATGCCGATTTTACAGACATGCAAAGTGAAAGAGTTGTGGAGTCCTGGAAGAGGAGCACGGAGATaGAGAGCGTCACCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HIMPILQTCKVKELWSPGRGARR*RASPSP Trigger: GGGAGAAGGTGACGCTCTGCATCTCCGTGCTCCTCT...TCCAGGACTCCACAACTCTTTCACTTTGCATGTCTGTAAAATCGGCATTATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATTTGAGGAGACCAAAAGGGGTAGCCTTCCTTaGAGCTTTTGGAGTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCSFEETKRGSLP*SFWSLH Trigger: GTGCAGACTCCAAAAGCTGCAAGGAAGGCTACCCCT...TTTGGTCTCCTCAAATGAACACACACACACACACACACACACACACACACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CCA 90 bp | GGTTGCTTCAGCAGACTCCTTGATGTCAATACTTTTAATATCAATGCTGATTTAGCACCAGCATCAGCATaGACAGCGGCGGCGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCFSRLLDVNTFNINADLAPASA*TAAAGA Trigger: TGCCCCCGCCGCCGCTGTCCATGCTGATGCTGGTGC...TAAATCAGCATTGATATTAAAAGTATTGACATCAAGGAGTCTGCTGAAGCAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR TCA 90 bp | AAAATGGGGGTAAAGACAGTGCAGTCTCAGGGTTGCTTCAGCAGACTCCTTGATCACATCGATTTTGCATaGGCTCTTAAAGATGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KMGVKTVQSQGCFSRLLDHIDFA*ALKDGR Trigger: CCGGCCATCTTTAAGAGCTCATGCAAAATCGATGTG...ATCAAGGAGTCTGCTGAAGCAACCCTGAGACTGCACTGTCTTTACCCCCATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR TCA 90 bp | GGAATCCCACTACAGAGGAAGCTGAGACAGTATAATTGTGAGTTCAAGGCCAGCTTTCCCAATAGTCCTTaGGGTTCATGGAGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GIPLQRKLRQYNCEFKASFPNSP*GSWRSQ Trigger: TTGGCTCCTCCATGAACCTCAAGGACTATTGGGAAA...GCTGGCCTTGAACTCACAATTATACTGTCTCAGCTTCCTCTGTAGTGGGATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR TCA 90 bp | GGTCATGAGGTCATGAGGGCATGCCTTGACAAAGGGAACCAAGATTCCAGAAACTGTATAGCGAGTACGTaGTGTCTTGGTAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHEVMRACLDKGNQDSRNCIAST*CLGRSP Trigger: AGGAGATCTACCAAGACATCACGTACTCGCTATACA...GTTTCTGGAATCTTGGTTCCCTTTGTCAAGGCATGCCCTCATGACCTCATGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR TCA 90 bp | CAGACATGCAAAGTGAAAGAGTTGTGGAGTCCTGGAGTTTTCCACAAAGATTTCAAGGGATGGTCTCGGTaGTCACGAGGAGAAAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: QTCKVKELWSPGVFHKDFKGWSR*SRGERP Trigger: CGGTCTTTCTCCTCGTGATCACCGAGACCATCCCTT...GAAATCTTTGTGGAAAACTCCAGGACTCCACAACTCTTTCACTTTGCATGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR TCA 90 bp | GTAAAGACAGTGCAGTCTCAGGGTTGCTTCAGCAGACTCCTTGATGTCAATACTGAAGCAGTTCAGGTTTaGGAGCTCAGCACCGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKTVQSQGCFSRLLDVNTEAVQV*ELSTVE Trigger: TTCTACGGTGCTGAGCTCTCAAACCTGAACTGCTTC...AGTATTGACATCAAGGAGTCTGCTGAAGCAACCCTGAGACTGCACTGTCTTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CCA 90 bp | TCCCTCATCTCTTATATCTCAATCACTGTTGAGATATTTGTAAGCCAACAAACTCGAGGCGCTGGCCACTaGCAGCAGCATCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLISYISITVEIFVSQQTRGAGH*QQHQHQ Trigger: CTGGTGCTGATGCTGCTGCCAGTGGCCAGCGCCTCG...AGTTTGTTGGCTTACAAATATCTCAACAGTGATTGAGATATAAGAGATGAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAATGTTGCCCTGAAGCTCCTTCCTCATCTGCAGATACTCGGGTAGGCCATCTTCTCCTGTGTACTTaGGTAGAGCTTTGGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKCCPEAPSSSADTRVGHLLLCT*VELWFC Trigger: ACAAAACCAAAGCTCTACTCAAGTACACAGGAGAAG...ATGGCCTACCCGAGTATCTGCAGATGAGGAAGGAGCTTCAGGGCAACATTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR TCA 90 bp | CCACTACAGAGGAAGCTGAGACAGTATAATTGTGAGTTCAAGGCCAGCCTGGACCTTCTCCTGTGTACTTaGGTAGAGCTTTGGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLQRKLRQYNCEFKASLDLLLCT*VELWFC Trigger: ACAAAACCAAAGCTCTACTCAAGTACACAGGAGAAG...GTCCAGGCTGGCCTTGAACTCACAATTATACTGTCTCAGCTTCCTCTGTAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR TCA 90 bp | GGAATCCCACTACAGAGGAAGCTGAGACAGTATAATTGTGAGTTCAAGGCCAGCTTCTTTGATTTCTGGTaGCAGAGCAGACAGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: GIPLQRKLRQYNCEFKASFFDFW*QSRQGQ Trigger: TTGTCCCTGTCTGCTCTGTCACCAGAAATCAAAGAA...GCTGGCCTTGAACTCACAATTATACTGTCTCAGCTTCCTCTGTAGTGGGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR GCA 90 bp | AAACTAGTGAGAATACTCAAAATGGTCTCTGTGGACTCTAGGAGTTGTGGTTTAAGAGGAGCACGGAGATaGAGAGCGTCACCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLVRILKMVSVDSRSCGLRGARR*RASPSP Trigger: GGGAGAAGGTGACGCTCTGCATCTCCGTGCTCCTCT...TAAACCACAACTCCTAGAGTCCACAGAGACCATTTTGAGTATTCTCACTAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CCA 90 bp | CAATACTGTGAAGGTGCCTCAAGAATTATTCAGACTTGTGCCTGTGCAAGCTCATCTTCAAACAGGTACTaGAACAGGCGGTGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QYCEGASRIIQTCACASSSSNRY*NRRCSA Trigger: AGCTGAGCACCGCCTGTTCCAGTACCTGTTTGAAGA...TGAGCTTGCACAGGCACAAGTCTGAATAATTCTTGAGGCACCTTCACAGTATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR TCA 90 bp | TTGTGGAGTCCTGGAGTTTTCCACAAAGATTTCAGAGGTTATCAGCTCTCAAACTCCACCTTCACCAGCTaGGACATAGACACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LWSPGVFHKDFRGYQLSNSTFTS*DIDTSN Trigger: GTTTGAGGTGTCTATGTCTCAGCTGGTGAAGGTGGA...GTTTGAGAGCTGATAACCTCTGAAATCTTTGTGGAAAACTCCAGGACTCCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR TCA 90 bp | CTCTACCTCTTGAGTGCTGGGATTAAAAAGTCTTTCAGGGCTCTATGGGATGTTCACATCGATTTTGCATaGGCTCTTAAAGATGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LYLLSAGIKKSFRALWDVHIDFA*ALKDGR Trigger: CCGGCCATCTTTAAGAGCTCATGCAAAATCGATGTG...AACATCCCATAGAGCCCTGAAAGACTTTTTAATCCCAGCACTCAAGAGGTAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR TCA 90 bp | CTCTACCTCTTGAGTGCTGGGATTAAAAAGTCTTTCAGGGCTCTATGGGATGTTTTTCCCAATAGTCCTTaGGGTTCATGGAGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LYLLSAGIKKSFRALWDVFPNSP*GSWRSQ Trigger: TTGGCTCCTCCATGAACCTCAAGGACTATTGGGAAA...AACATCCCATAGAGCCCTGAAAGACTTTTTAATCCCAGCACTCAAGAGGTAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATTTGAGGAGACCAAATGTATAGCGAGTACGTaGTGTCTTGGTAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCSFEETKCIAST*CLGRSP Trigger: AGGAGATCTACCAAGACATCACGTACTCGCTATACA...TTTGGTCTCCTCAAATGAACACACACACACACACACACACACACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR TCA 90 bp | AAAATGGGGGTAAAGACAGTGCAGTCTCAGGGTTGCTTCAGCAGACTCCTTGATGTTGGCACTGAAATTTaGGATTTTTACCCTACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KMGVKTVQSQGCFSRLLDVGTEI*DFYPTV Trigger: CACCGTAGGGTAAAAATCTCAAATTTCAGTGCCAAC...ATCAAGGAGTCTGCTGAAGCAACCCTGAGACTGCACTGTCTTTACCCCCATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATTTGAGGAGACCAAAAGCCGAACTTCATGGTaGAGTTTTGGTAGTCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCSFEETKSRTSW*SFGSQT Trigger: CGTTTGACTACCAAAACTGCACCATGAAGTTCGGCT...TTTGGTCTCCTCAAATGAACACACACACACACACACACACACACACACACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CCA 90 bp | GTAAAGACAGTGCAGTCTCAGGGTTGCTTCAGCAGACTCCTTGATGTCAATACTATAGACACCTCAAACTaGATGATGACAGGATGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VKTVQSQGCFSRLLDVNTIDTSN*MMTGWD Trigger: GTCCCATCCTGTCATCATCCAGTTTGAGGTGTCTAT...AGTATTGACATCAAGGAGTCTGCTGAAGCAACCCTGAGACTGCACTGTCTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CCA 90 bp | TCAAATAGCTTCTCAAGCATAACTAATTTTGACAACGTCCTGCATTCTGGGTGCTGGGCATCGTGTGTGTaGTCGGAGTTCTGTAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNSFSSITNFDNVLHSGCWASCV*SEFCSA Trigger: TGCACTACAGAACTCCGACCACACACACGATGCCCA...GCACCCAGAATGCAGGACGTTGTCAAAATTAGTTATGCTTGAGAAGCTATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR TCA 90 bp | TCAAATAGCTTCTCAAGCATAACTAATTTTGACAACGTCCTGCATTCTGGGTGCGAAGCAGTTCAGGTTTaGGAGCTCAGCACCGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNSFSSITNFDNVLHSGCEAVQV*ELSTVE Trigger: TTCTACGGTGCTGAGCTCTCAAACCTGAACTGCTTC...GCACCCAGAATGCAGGACGTTGTCAAAATTAGTTATGCTTGAGAAGCTATTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR GCA 90 bp | CACATAATGCCGATTTTACAGACATGCAAAGTGAAAGAGTTGTGGAGTCCTGGATTTCCAGATCTTCTCTaGAGGGACTCGCATGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: HIMPILQTCKVKELWSPGFPDLL*RDSHEL Trigger: GAGTTCATGCGAGTCCCTGCAGAGAAGATCTGGAAA...TCCAGGACTCCACAACTCTTTCACTTTGCATGTCTGTAAAATCGGCATTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR GCA 90 bp | GTGCAGTCTCAGGGTTGCTTCAGCAGACTCCTTGATGTCAATACTTTTAATATCTTTCCAGATCTTCTCTaGAGGGACTCGCATGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: VQSQGCFSRLLDVNTFNIFPDLL*RDSHEL Trigger: GAGTTCATGCGAGTCCCTGCAGAGAAGATCTGGAAA...GATATTAAAAGTATTGACATCAAGGAGTCTGCTGAAGCAACCCTGAGACTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR TCA 90 bp | CAATACTGTGAAGGTGCCTCAAGAATTATTCAGACTTGTGCCTGTGCAAGCTCAGTTGGCACTGAAATTTaGGATTTTTACCCTACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QYCEGASRIIQTCACASSVGTEI*DFYPTV Trigger: CACCGTAGGGTAAAAATCTCAAATTTCAGTGCCAAC...TGAGCTTGCACAGGCACAAGTCTGAATAATTCTTGAGGCACCTTCACAGTATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR TCA 90 bp | CTCTACCTCTTGAGTGCTGGGATTAAAAAGTCTTTCAGGGCTCTATGGGATGTTGTTGGCACTGAAATTTaGGATTTTTACCCTACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYLLSAGIKKSFRALWDVVGTEI*DFYPTV Trigger: CACCGTAGGGTAAAAATCTCAAATTTCAGTGCCAAC...AACATCCCATAGAGCCCTGAAAGACTTTTTAATCCCAGCACTCAAGAGGTAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CCA 90 bp | CACATAATGCCGATTTTACAGACATGCAAAGTGAAAGAGTTGTGGAGTCCTGGAATAGACACCTCAAACTaGATGATGACAGGATGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HIMPILQTCKVKELWSPGIDTSN*MMTGWD Trigger: GTCCCATCCTGTCATCATCCAGTTTGAGGTGTCTAT...TCCAGGACTCCACAACTCTTTCACTTTGCATGTCTGTAAAATCGGCATTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR CCA 90 bp | CACATAATGCCGATTTTACAGACATGCAAAGTGAAAGAGTTGTGGAGTCCTGGAAGGAGCCGAACTTCATaGTGCAGTTTTGGTAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HIMPILQTCKVKELWSPGRSRTS*CSFGSQ Trigger: TTGACTACCAAAACTGCACCATGAAGTTCGGCTCCT...TCCAGGACTCCACAACTCTTTCACTTTGCATGTCTGTAAAATCGGCATTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR TCA 90 bp | CTCAGGGTTGCTTCAGCAGACTCCTTGATGTCAATACTTTTAATATCAATGCTGTTTGGATGGCTTCTTTaGTTTCTGGTGACAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRVASADSLMSILLISMLFGWLL*FLVTEQ Trigger: CTGCTCTGTCACCAGAAATCAAAGAAGCCATCCAAA...CAGCATTGATATTAAAAGTATTGACATCAAGGAGTCTGCTGAAGCAACCCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR TCA 90 bp | TCAAATAGCTTCTCAAGCATAACTAATTTTGACAACGTCCTGCATTCTGGGTGCTTTGGATGGCTTCTTTaGTTTCTGGTGACAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNSFSSITNFDNVLHSGCFGWLL*FLVTEQ Trigger: CTGCTCTGTCACCAGAAATCAAAGAAGCCATCCAAA...GCACCCAGAATGCAGGACGTTGTCAAAATTAGTTATGCTTGAGAAGCTATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTCATCTCTTATATCTCAATCACTGTTGAGATATTTGTAAGCCAACAAACTAGGGGTAGCCTTCCTTaGAGCTTTTGGAGTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLISYISITVEIFVSQQTRGSLP*SFWSLH Trigger: GTGCAGACTCCAAAAGCTGCAAGGAAGGCTACCCCT...AGTTTGTTGGCTTACAAATATCTCAACAGTGATTGAGATATAAGAGATGAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CCA 90 bp | TCAAATAGCTTCTCAAGCATAACTAATTTTGACAACGTCCTGCATTCTGGGTGCATAGACACCTCAAACTaGATGATGACAGGATGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SNSFSSITNFDNVLHSGCIDTSN*MMTGWD Trigger: GTCCCATCCTGTCATCATCCAGTTTGAGGTGTCTAT...GCACCCAGAATGCAGGACGTTGTCAAAATTAGTTATGCTTGAGAAGCTATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGGGTTGCTTCAGCAGACTCCTTGATGTCAATACTTTTAATATCAATGCTGGTAAAGCACGATGTCTaGTTTCCAGATCTTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRVASADSLMSILLISMLVKHDV*FPDLLC Trigger: GCAGAGAAGATCTGGAAACCAGACATCGTGCTTTAC...CAGCATTGATATTAAAAGTATTGACATCAAGGAGTCTGCTGAAGCAACCCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CCA 90 bp | CTCAGGGTTGCTTCAGCAGACTCCTTGATGTCAATACTTTTAATATCAATGCTGAGGAGCCGAACTTCATaGTGCAGTTTTGGTAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRVASADSLMSILLISMLRSRTS*CSFGSQ Trigger: TTGACTACCAAAACTGCACCATGAAGTTCGGCTCCT...CAGCATTGATATTAAAAGTATTGACATCAAGGAGTCTGCTGAAGCAACCCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CCA 90 bp | GGTTGCTTCAGCAGACTCCTTGATGTCAATACTTTTAATATCAATGCTGATTTATGGGCATCGTGTGTGTaGTCGGAGTTCTGTAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCFSRLLDVNTFNINADLWASCV*SEFCSA Trigger: TGCACTACAGAACTCCGACCACACACACGATGCCCA...TAAATCAGCATTGATATTAAAAGTATTGACATCAAGGAGTCTGCTGAAGCAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CCA 90 bp | ACAAACTTTAGTTTTAATCAAGCCCTGCTCCTTTCTAGTCTGAGCAAATTTCATTCTTCAAACAGGTACTaGAACAGGCGGTGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TNFSFNQALLLSSLSKFHSSNRY*NRRCSA Trigger: AGCTGAGCACCGCCTGTTCCAGTACCTGTTTGAAGA...ATGAAATTTGCTCAGACTAGAAAGGAGCAGGGCTTGATTAAAACTAAAGTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CCA 90 bp | TCCCTCATCTCTTATATCTCAATCACTGTTGAGATATTTGTAAGCCAACAAACTTCTTCAAACAGGTACTaGAACAGGCGGTGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLISYISITVEIFVSQQTSSNRY*NRRCSA Trigger: AGCTGAGCACCGCCTGTTCCAGTACCTGTTTGAAGA...AGTTTGTTGGCTTACAAATATCTCAACAGTGATTGAGATATAAGAGATGAGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR TCA 90 bp | AACTCAATTCGTTCAAATAGCTTCTCAAGCATAACTAATTTTGACAACGTCCTGTGTATAGCGAGTACGTaGTGTCTTGGTAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSIRSNSFSSITNFDNVLCIAST*CLGRSP Trigger: AGGAGATCTACCAAGACATCACGTACTCGCTATACA...CAGGACGTTGTCAAAATTAGTTATGCTTGAGAAGCTATTTGAACGAATTGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTCATCTCTTATATCTCAATCACTGTTGAGATATTTGTAAGCCAACAAACTTTCTTTGATTTCTGGTaGCAGAGCAGACAGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SLISYISITVEIFVSQQTFFDFW*QSRQGQ Trigger: TTGTCCCTGTCTGCTCTGTCACCAGAAATCAAAGAA...AGTTTGTTGGCTTACAAATATCTCAACAGTGATTGAGATATAAGAGATGAGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTCATCTCTTATATCTCAATCACTGTTGAGATATTTGTAAGCCAACAAACTTTTGGATGGCTTCTTTaGTTTCTGGTGACAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLISYISITVEIFVSQQTFGWLL*FLVTEQ Trigger: CTGCTCTGTCACCAGAAATCAAAGAAGCCATCCAAA...AGTTTGTTGGCTTACAAATATCTCAACAGTGATTGAGATATAAGAGATGAGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR TCA 90 bp | TCAAATAGCTTCTCAAGCATAACTAATTTTGACAACGTCCTGCATTCTGGGTGCTACTTCCAATCATCTTaGATCTCTTTGGCTACATTC | + |
|
Preference number: 4 (lower is better) Translates to: SNSFSSITNFDNVLHSGCYFQSS*ISLATF Trigger: GAATGTAGCCAAAGAGATTCAAGATGATTGGAAGTA...GCACCCAGAATGCAGGACGTTGTCAAAATTAGTTATGCTTGAGAAGCTATTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTCATCTCTTATATCTCAATCACTGTTGAGATATTTGTAAGCCAACAAACTAGCCGAACTTCATGGTaGAGTTTTGGTAGTCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: SLISYISITVEIFVSQQTSRTSW*SFGSQT Trigger: CGTTTGACTACCAAAACTGCACCATGAAGTTCGGCT...AGTTTGTTGGCTTACAAATATCTCAACAGTGATTGAGATATAAGAGATGAGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTCATCTCTTATATCTCAATCACTGTTGAGATATTTGTAAGCCAACAAACTGTAAAGCACGATGTCTaGTTTCCAGATCTTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLISYISITVEIFVSQQTVKHDV*FPDLLC Trigger: GCAGAGAAGATCTGGAAACCAGACATCGTGCTTTAC...AGTTTGTTGGCTTACAAATATCTCAACAGTGATTGAGATATAAGAGATGAGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| 3UTR CAA 72 bp | GTCATTGATGAATCAGACACTTCTTACTATGAAGTATaGTCTCATCACAAGCCCAAAAGGAATAGACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VIDESDTSYYEV*SHHKPKRNRPH Trigger: ATGTGGTCTATTCCTTTTGGGCTTGTGATGAGACAATACTTCATAGTAAGAAGTGTCTGATTCATCAATGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR CCA 90 bp | TCCCTCATCTCTTATATCTCAATCACTGTTGAGATATTTGTAAGCCAACAAACTCATCTTGAATCTCTTTaGCTACATTCTGTGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLISYISITVEIFVSQQTHLESL*LHSVLS Trigger: TGAAAGCACAGAATGTAGCCAAAGAGATTCAAGATG...AGTTTGTTGGCTTACAAATATCTCAACAGTGATTGAGATATAAGAGATGAGGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS TCA 90 bp | CTTGGCAGGGGTAGCCTTCCTTGCAGCTTTTGGAGTCTGCACGGCTaGAGCAGTTCAGGTTTGAGAGCTCAGCACCGTAGAAGTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGRGSLPCSFWSLHG*SSSGLRAQHRRSSS Trigger: CGAGGAACTTCTACGGTGCTGAGCTCTCAAACCTGAACTGCTTCAGCCGTGCAGACTCCAAAAGCTGCAAGGAAGGCTACCCCTGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGGGAACCAAGATTCCAGAAACACTCGCCCTTTCAGCCACGTGGTGACGCACCTTCCTTGCAGCTTTaGGAGTCTGCACGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QREPRFQKHSPFQPRGDAPSLQL*ESARLK Trigger: CTTCAGCCGTGCAGACTCCAAAAGCTGCAAGGAAGG...TGCGTCACCACGTGGCTGAAAGGGCGAGTGTTTCTGGAATCTTGGTTCCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS TCA 90 bp | TTCCTTGCAGCTTTTGGAGTCTGCACGGCTGAAGCAGTTCAGGTTTaGGAGCTCAGCACCGTAGAAGTTCCTCGTCTTTGGGGCGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLAAFGVCTAEAVQV*ELSTVEVPRLWGVF Trigger: GAAGACGCCCCAAAGACGAGGAACTTCTACGGTGCTGAGCTCTCAAACCTGAACTGCTTCAGCCGTGCAGACTCCAAAAGCTGCAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTGGAAAAACAGGAGCCCAGCTTCTTCCCCATTCTTTCTGCTTCCAGGCTGGCCACATGTCCCATCTaGGCAGGGGTAGCCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FLEKQEPSFFPILSASRLATCPI*AGVAFL Trigger: AAGGAAGGCTACCCCTGCCAAGATGGGACATGTGGC...CAGCCTGGAAGCAGAAAGAATGGGGAAGAAGCTGGGCTCCTGTTTTTCCAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR CAA 90 bp | GTGGGGCTATTGAGAAAGTGCCCTTGCATCAGCACAGGTGAGCGAGCCTTGGCGAGTAGAGCTTTGGTTTaGTCATCCACTTGGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: VGLLRKCPCISTGERALASRALV*SSTWKS Trigger: GGATTTCCAAGTGGATGACAAAACCAAAGCTCTACT...CGCCAAGGCTCGCTCACCTGTGCTGATGCAAGGGCACTTTCTCAATAGCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGGCTATTGAGAAAGTGCCCTTGCATCAGCACAGGTGAGCGAGCCTTGGCGACTTCTCCTGTGTACTaGAGTAGAGCTTTGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VGLLRKCPCISTGERALATSPVY*SRALVL Trigger: CAAAACCAAAGCTCTACTCAAGTACACAGGAGAAGT...CGCCAAGGCTCGCTCACCTGTGCTGATGCAAGGGCACTTTCTCAATAGCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGGGAACCAAGATTCCAGAAACACTCGCCCTTTCAGCCACGTGGTGACGCACGAGTACGTGATGTCTaGGTAGATCTCCTCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QREPRFQKHSPFQPRGDARVRDV*VDLLTA Trigger: TGCTGTGAGGAGATCTACCAAGACATCACGTACTCG...TGCGTCACCACGTGGCTGAAAGGGCGAGTGTTTCTGGAATCTTGGTTCCCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CAA 90 bp | GGAATCCCACTACAGAGGAAGCTGAGACAGTATAATTGTGAGTTCAAGGCCAGCGCCACATGTCCCATCTaGGCAGGGGTAGCCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GIPLQRKLRQYNCEFKASATCPI*AGVAFL Trigger: AAGGAAGGCTACCCCTGCCAAGATGGGACATGTGGC...GCTGGCCTTGAACTCACAATTATACTGTCTCAGCTTCCTCTGTAGTGGGATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CAA 90 bp | GTGGGGCTATTGAGAAAGTGCCCTTGCATCAGCACAGGTGAGCGAGCCTTGGCGGAGCTTCTTGTGAGGTaGGCACTGAAATTTGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: VGLLRKCPCISTGERALAELLVR*ALKFEI Trigger: AATCTCAAATTTCAGTGCCAACCTCACAAGAAGCTC...CGCCAAGGCTCGCTCACCTGTGCTGATGCAAGGGCACTTTCTCAATAGCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CAA 90 bp | GGAATCCCACTACAGAGGAAGCTGAGACAGTATAATTGTGAGTTCAAGGCCAGCCCTTCCTTGCAGCTTTaGGAGTCTGCACGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GIPLQRKLRQYNCEFKASPSLQL*ESARLK Trigger: CTTCAGCCGTGCAGACTCCAAAAGCTGCAAGGAAGG...GCTGGCCTTGAACTCACAATTATACTGTCTCAGCTTCCTCTGTAGTGGGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CAA 90 bp | GGTCATGAGGTCATGAGGGCATGCCTTGACAAAGGGAACCAAGATTCCAGAAACCGAGTACGTGATGTCTaGGTAGATCTCCTCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GHEVMRACLDKGNQDSRNRVRDV*VDLLTA Trigger: TGCTGTGAGGAGATCTACCAAGACATCACGTACTCG...GTTTCTGGAATCTTGGTTCCCTTTGTCAAGGCATGCCCTCATGACCTCATGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CAA 90 bp | AAAATGGGGGTAAAGACAGTGCAGTCTCAGGGTTGCTTCAGCAGACTCCTTGATGGTTTTGTCATCCACTaGGAAATCCCCATCGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: KMGVKTVQSQGCFSRLLDGFVIH*EIPIGV Trigger: AACGCCGATGGGGATTTCCAAGTGGATGACAAAACC...ATCAAGGAGTCTGCTGAAGCAACCCTGAGACTGCACTGTCTTTACCCCCATTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CAA 90 bp | AAAGGGAACCAAGATTCCAGAAACACTCGCCCTTTCAGCCACGTGGTGACGCACACTTCTCCTGTGTACTaGAGTAGAGCTTTGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGNQDSRNTRPFSHVVTHTSPVY*SRALVL Trigger: CAAAACCAAAGCTCTACTCAAGTACACAGGAGAAGT...GTGCGTCACCACGTGGCTGAAAGGGCGAGTGTTTCTGGAATCTTGGTTCCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGGGAACCAAGATTCCAGAAACACTCGCCCTTTCAGCCACGTGGTGACGCAGAGCTTCTTGTGAGGTaGGCACTGAAATTTGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: QREPRFQKHSPFQPRGDAELLVR*ALKFEI Trigger: AATCTCAAATTTCAGTGCCAACCTCACAAGAAGCTC...TGCGTCACCACGTGGCTGAAAGGGCGAGTGTTTCTGGAATCTTGGTTCCCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
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| CDS-3UTR CAA 90 bp | CACATAATGCCGATTTTACAGACATGCAAAGTGAAAGAGTTGTGGAGTCCTGGACCTTCCTTGCAGCTTTaGGAGTCTGCACGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HIMPILQTCKVKELWSPGPSLQL*ESARLK Trigger: CTTCAGCCGTGCAGACTCCAAAAGCTGCAAGGAAGG...TCCAGGACTCCACAACTCTTTCACTTTGCATGTCTGTAAAATCGGCATTATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS TCA 90 bp | AACAGACTCAGAACTGGAGCTTCTTGTGAGGTTGGCACTGAAATTTaGGATTTTTACCCTACGGTGGTGGCAATAGCCACATGTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: NRLRTGASCEVGTEI*DFYPTVVAIATCPI Trigger: GATGGGACATGTGGCTATTGCCACCACCGTAGGGTAAAAATCTCAAATTTCAGTGCCAACCTCACAAGAAGCTCCAGTTCTGAGTCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
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| CDS-3UTR CAA 90 bp | AAACTAGTGAGAATACTCAAAATGGTCTCTGTGGACTCTAGGAGTTGTGGTTTAGCCACATGTCCCATCTaGGCAGGGGTAGCCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KLVRILKMVSVDSRSCGLATCPI*AGVAFL Trigger: AAGGAAGGCTACCCCTGCCAAGATGGGACATGTGGC...TAAACCACAACTCCTAGAGTCCACAGAGACCATTTTGAGTATTCTCACTAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
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| CDS-3UTR CAA 90 bp | CACATAATGCCGATTTTACAGACATGCAAAGTGAAAGAGTTGTGGAGTCCTGGAGTAGTCATTCCAGATTaGCTTCAGCCACAGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HIMPILQTCKVKELWSPGVVIPD*LQPQVG Trigger: ACCAACCTGTGGCTGAAGCAAATCTGGAATGACTAC...TCCAGGACTCCACAACTCTTTCACTTTGCATGTCTGTAAAATCGGCATTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATTTGAGGAGACCAAAACTTCTCCTGTGTACTaGAGTAGAGCTTTGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCVCSFEETKTSPVY*SRALVL Trigger: CAAAACCAAAGCTCTACTCAAGTACACAGGAGAAGT...TTTGGTCTCCTCAAATGAACACACACACACACACACACACACACACACACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
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| CDS-3UTR CAA 90 bp | GTAAAGACAGTGCAGTCTCAGGGTTGCTTCAGCAGACTCCTTGATGTCAATACTGAGCTTCTTGTGAGGTaGGCACTGAAATTTGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: VKTVQSQGCFSRLLDVNTELLVR*ALKFEI Trigger: AATCTCAAATTTCAGTGCCAACCTCACAAGAAGCTC...AGTATTGACATCAAGGAGTCTGCTGAAGCAACCCTGAGACTGCACTGTCTTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS TCA 90 bp | TTCAGCAATATACTTCACACTTTGGATGGCTTCTTTGATTTCTGGTaGCAGAGCAGACAGGGACAACACAGCATCAACAGACTCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: FSNILHTLDGFFDFW*QSRQGQHSINRLRT Trigger: AGTTCTGAGTCTGTTGATGCTGTGTTGTCCCTGTCTGCTCTGTCACCAGAAATCAAAGAAGCCATCCAAAGTGTGAAGTATATTGCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
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| CDS-3UTR CAA 90 bp | TCAAATAGCTTCTCAAGCATAACTAATTTTGACAACGTCCTGCATTCTGGGTGCGTAGTCATTCCAGATTaGCTTCAGCCACAGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SNSFSSITNFDNVLHSGCVVIPD*LQPQVG Trigger: ACCAACCTGTGGCTGAAGCAAATCTGGAATGACTAC...GCACCCAGAATGCAGGACGTTGTCAAAATTAGTTATGCTTGAGAAGCTATTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
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| CDS-3UTR CAA 90 bp | CTCTCAAACTGGCAATATGTTGGAAACAAGAGTGTGAAGCTGAATCTAAAATGGGGTTTTGTCATCCACTaGGAAATCCCCATCGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSNWQYVGNKSVKLNLKWGFVIH*EIPIGV Trigger: AACGCCGATGGGGATTTCCAAGTGGATGACAAAACC...CCATTTTAGATTCAGCTTCACACTCTTGTTTCCAACATATTGCCAGTTTGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
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| CDS-3UTR CAA 90 bp | GTAAAGACAGTGCAGTCTCAGGGTTGCTTCAGCAGACTCCTTGATGTCAATACTACCATATTTACCTCTTaGGCTACATTCTGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VKTVQSQGCFSRLLDVNTTIFTS*ATFCAF Trigger: GAAAGCACAGAATGTAGCCAAAGAGGTAAATATGGT...AGTATTGACATCAAGGAGTCTGCTGAAGCAACCCTGAGACTGCACTGTCTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CAA 90 bp | CACATAATGCCGATTTTACAGACATGCAAAGTGAAAGAGTTGTGGAGTCCTGGAAGTAGAGCTTTGGTTTaGTCATCCACTTGGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: HIMPILQTCKVKELWSPGSRALV*SSTWKS Trigger: GGATTTCCAAGTGGATGACAAAACCAAAGCTCTACT...TCCAGGACTCCACAACTCTTTCACTTTGCATGTCTGTAAAATCGGCATTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR CAA 90 bp | TTGTGGAGTCCTGGAGTTTTCCACAAAGATTTCAGAGGTTATCAGCTCTCAAACATCTCCTCACAGCAGTaGTACTTGATTTCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LWSPGVFHKDFRGYQLSNISSQQ*YLISCL Trigger: CAAACATGAAATCAAGTACAACTGCTGTGAGGAGAT...GTTTGAGAGCTGATAACCTCTGAAATCTTTGTGGAAAACTCCAGGACTCCACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034851.7 |
||
| CDS-3UTR CAA 90 bp | GGTTGCTTCAGCAGACTCCTTGATGTCAATACTTTTAATATCAATGCTGATTTACGAGTACGTGATGTCTaGGTAGATCTCCTCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GCFSRLLDVNTFNINADLRVRDV*VDLLTA Trigger: TGCTGTGAGGAGATCTACCAAGACATCACGTACTCG...TAAATCAGCATTGATATTAAAAGTATTGACATCAAGGAGTCTGCTGAAGCAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CAA 90 bp | GGTTGCTTCAGCAGACTCCTTGATGTCAATACTTTTAATATCAATGCTGATTTAGTAGTCATTCCAGATTaGCTTCAGCCACAGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GCFSRLLDVNTFNINADLVVIPD*LQPQVG Trigger: ACCAACCTGTGGCTGAAGCAAATCTGGAATGACTAC...TAAATCAGCATTGATATTAAAAGTATTGACATCAAGGAGTCTGCTGAAGCAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CAA 90 bp | GGTTGCTTCAGCAGACTCCTTGATGTCAATACTTTTAATATCAATGCTGATTTAAGTAGAGCTTTGGTTTaGTCATCCACTTGGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: GCFSRLLDVNTFNINADLSRALV*SSTWKS Trigger: GGATTTCCAAGTGGATGACAAAACCAAAGCTCTACT...TAAATCAGCATTGATATTAAAAGTATTGACATCAAGGAGTCTGCTGAAGCAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CAA 90 bp | GGTTGCTTCAGCAGACTCCTTGATGTCAATACTTTTAATATCAATGCTGATTTAATCTCCTCACAGCAGTaGTACTTGATTTCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GCFSRLLDVNTFNINADLISSQQ*YLISCL Trigger: CAAACATGAAATCAAGTACAACTGCTGTGAGGAGAT...TAAATCAGCATTGATATTAAAAGTATTGACATCAAGGAGTCTGCTGAAGCAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214204.3 |
||
| CDS-3UTR CAA 90 bp | AACTCAATTCGTTCAAATAGCTTCTCAAGCATAACTAATTTTGACAACGTCCTGATCTCCTCACAGCAGTaGTACTTGATTTCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSIRSNSFSSITNFDNVLISSQQ*YLISCL Trigger: CAAACATGAAATCAAGTACAACTGCTGTGAGGAGAT...CAGGACGTTGTCAAAATTAGTTATGCTTGAGAAGCTATTTGAACGAATTGAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034851.7 ENSMUST00000238862.2 |
||
| CDS CCA 72 bp | GGTACTGGAACAGGCGGTGCTCAGCTTCCGAGGCGCTaGCCACTGGCAGCAGCATCAGCACCAGCATCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GTGTGGAQLPRR*PLAAASAPASA Trigger: TGCTGATGCTGGTGCTGATGCTGCTGCCAGTGGCCAGCGCCTCGGAAGCTGAGCACCGCCTGTTCCAGTACC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
||
| CDS CAA 72 bp | TACCCTACGGTGGTGGCAATAGCCACATGTCCCATCTaGGCAGGGGTAGCCTTCCTTGCAGCTTTTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: YPTVVAIATCPI*AGVAFLAAFGV Trigger: GACTCCAAAAGCTGCAAGGAAGGCTACCCCTGCCAAGATGGGACATGTGGCTATTGCCACCACCGTAGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
||
| CDS TCA 72 bp | GGTAGCCTTCCTTGCAGCTTTTGGAGTCTGCACGGCTaGAGCAGTTCAGGTTTGAGAGCTCAGCACCGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: GSLPCSFWSLHG*SSSGLRAQHRR Trigger: TCTACGGTGCTGAGCTCTCAAACCTGAACTGCTTCAGCCGTGCAGACTCCAAAAGCTGCAAGGAAGGCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
||
| CDS TCA 72 bp | GCTTTTGGAGTCTGCACGGCTGAAGCAGTTCAGGTTTaGGAGCTCAGCACCGTAGAAGTTCCTCGTCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AFGVCTAEAVQV*ELSTVEVPRLW Trigger: CCAAAGACGAGGAACTTCTACGGTGCTGAGCTCTCAAACCTGAACTGCTTCAGCCGTGCAGACTCCAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
||
| CDS CAA 72 bp | GATCTTCTCTGCAGGGACTCGCATGAACTCCACCCCTaGGTAGTCAGAGGGTTTCCATTTCAGCTTGTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: DLLCRDSHELHP*VVRGFPFQLVV Trigger: GACTACAAGCTGAAATGGAAACCCTCTGACTACCAAGGGGTGGAGTTCATGCGAGTCCCTGCAGAGAAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
||
| CDS CAA 90 bp | TGGTTTCCAGATCTTCTCTGCAGGGACTCGCATGAACTCCACCCCTaGGTAGTCAGAGGGTTTCCATTTCAGCTTGTAGTCATTCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: WFPDLLCRDSHELHP*VVRGFPFQLVVIPD Trigger: ATCTGGAATGACTACAAGCTGAAATGGAAACCCTCTGACTACCAAGGGGTGGAGTTCATGCGAGTCCCTGCAGAGAAGATCTGGAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
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| CDS CAA 72 bp | GTCACTTCTCCTGTGTACTTGAGTAGAGCTTTGGTTTaGTCATCCACTTGGAAATCCCCATCGGCGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: VTSPVYLSRALV*SSTWKSPSALL Trigger: CAACAACGCCGATGGGGATTTCCAAGTGGATGACAAAACCAAAGCTCTACTCAAGTACACAGGAGAAGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
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| CDS TCA 72 bp | TCCATGATCTGGTTTACTTCATCCACCTTCACCAGCTaGGACATAGACACCTCAAACTGGATGATGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: SMIWFTSSTFTS*DIDTSNWMMTG Trigger: TCCTGTCATCATCCAGTTTGAGGTGTCTATGTCTCAGCTGGTGAAGGTGGATGAAGTAAACCAGATCATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
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| CDS TCA 72 bp | AGAACTGGAGCTTCTTGTGAGGTTGGCACTGAAATTTaGGATTTTTACCCTACGGTGGTGGCAATAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: RTGASCEVGTEI*DFYPTVVAIAT Trigger: TGTGGCTATTGCCACCACCGTAGGGTAAAAATCTCAAATTTCAGTGCCAACCTCACAAGAAGCTCCAGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
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| CDS CAA 72 bp | GCATCAACAGACTCAGAACTGGAGCTTCTTGTGAGGTaGGCACTGAAATTTGAGATTTTTACCCTACGGTGG | + |
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Preference number: 6 (lower is better) Translates to: ASTDSELELLVR*ALKFEIFTLRW Trigger: CCACCGTAGGGTAAAAATCTCAAATTTCAGTGCCAACCTCACAAGAAGCTCCAGTTCTGAGTCTGTTGATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
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| CDS CAA 90 bp | GCTTTCATATTTTCAGCAATATACTTCACACTTTGGATGGCTTCTTaGATTTCTGGTGACAGAGCAGACAGGGACAACACAGCATCAACA | + |
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Preference number: 6 (lower is better) Translates to: AFIFSAIYFTLWMAS*ISGDRADRDNTAST Trigger: TGTTGATGCTGTGTTGTCCCTGTCTGCTCTGTCACCAGAAATCAAAGAAGCCATCCAAAGTGTGAAGTATATTGCTGAAAATATGAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034851.7 ENSMUST00000214204.3 ENSMUST00000238862.2 |
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