Pregenerated sensors for CHRNA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022041Ensembl transcript IDs: ENSMUST00000022620.11, ENSMUST00000206455.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTCCCAGCCTCCCCACCCCAGCTGGCTGTCCTCTCTGACATTCTaGATCCACAGTGTTGTGCAGAACTCTTCCACACCAGGCACTCCC | + |
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Preference number: 1 (lower is better) Translates to: ASQPPHPSWLSSLTF*IHSVVQNSSTPGTP Trigger: GGGAGTGCCTGGTGTGGAAGAGTTCTGCACAACACTGTGGATTCAGAATGTCAGAGAGGACAGCCAGCTGGGGTGGGGAGGCTGGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 90 bp | GGCCTCCGACAAGCAGATCTCCTAGGTCTGTCGAGGTGCTGTGTGTaGGGTTCGGAAGGAGAGCACCCCAAGACAGAGAACAAACTTGGT | + |
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Preference number: 1 (lower is better) Translates to: GLRQADLLGLSRCCV*GSEGEHPKTENKLG Trigger: ACCAAGTTTGTTCTCTGTCTTGGGGTGCTCTCCTTCCGAACCCCACACACAGCACCTCGACAGACCTAGGAGATCTGCTTGTCGGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 90 bp | CTGGAGCCTAAAGCTACCAGGTTGGTTTCTCTCCACTACTCACGATaGAGGGTCCAGCTACTGAGCTCTCTCACCCAGCTCAGGATGAGT | + |
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Preference number: 1 (lower is better) Translates to: LEPKATRLVSLHYSR*RVQLLSSLTQLRMS Trigger: ACTCATCCTGAGCTGGGTGAGAGAGCTCAGTAGCTGGACCCTCCATCGTGAGTAGTGGAGAGAAACCAACCTGGTAGCTTTAGGCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 90 bp | GGCTGCATTCAGTGGAGAAAGGGGGAGCCAAGGCCTGAGACTGAGTaGGTATCATTAGAACTGGTAACAGGAAGTCTGGGTAAGGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: GCIQWRKGEPRPETE*VSLELVTGSLGKAS Trigger: GGAGGCCTTACCCAGACTTCCTGTTACCAGTTCTAATGATACCCACTCAGTCTCAGGCCTTGGCTCCCCCTTTCTCCACTGAATGCAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR TCA 90 bp | ATGGAGGGTCCAGCTACTGAGCTCTCTCACCCAGCTCAGGATGAGTaGAAGCAACAAGAGCAGAGACTCTGCCCTGAAGGAGCACACAAT | + |
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Preference number: 1 (lower is better) Translates to: MEGPATELSHPAQDE*KQQEQRLCPEGAHN Trigger: ATTGTGTGCTCCTTCAGGGCAGAGTCTCTGCTCTTGTTGCTTTCACTCATCCTGAGCTGGGTGAGAGAGCTCAGTAGCTGGACCCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 90 bp | GTGACCCTGAATCTCATTGCTGTTAGCGTCTGGGACCTAATTCCTTaGGGACTGCAGAATGTTCTGAAAGGCCCAATCCGCTGGGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: VTLNLIAVSVWDLIP*GLQNVLKGPIRWAS Trigger: AGAAGCCCAGCGGATTGGGCCTTTCAGAACATTCTGCAGTCCCCAAGGAATTAGGTCCCAGACGCTAACAGCAATGAGATTCAGGGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR GCA 90 bp | ACTCCTTTGGGAAGTACCCCTGTCCCTCTGACATTTCCTGCAAAGTaGATAGAGACAGGTTCAGTGCAGACTCTGAGCTTCTTCTTGGGC | + |
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Preference number: 1 (lower is better) Translates to: TPLGSTPVPLTFPAK*IETGSVQTLSFFLG Trigger: GCCCAAGAAGAAGCTCAGAGTCTGCACTGAACCTGTCTCTATGCACTTTGCAGGAAATGTCAGAGGGACAGGGGTACTTCCCAAAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR GCA 90 bp | AACCCACGACACAGGTTGAAAGCCACTGCTCTAGAACTTTCTTTGTaGCCCACTCCTTTGGGAAGTACCCCTGTCCCTCTGACATTTCCT | + |
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Preference number: 1 (lower is better) Translates to: NPRHRLKATALELSL*PTPLGSTPVPLTFP Trigger: AGGAAATGTCAGAGGGACAGGGGTACTTCCCAAAGGAGTGGGGCACAAAGAAAGTTCTAGAGCAGTGGCTTTCAACCTGTGTCGTGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR TCA 90 bp | AGCACACAATTGAAAGAGCTTGATGCAAAGATCTCAGTTCCTATGTaGGGCATGCTGACAGAGCCAGGAATTGAGGACCAGGTCCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: STQLKELDAKISVPM*GMLTEPGIEDQVPV Trigger: CACAGGGACCTGGTCCTCAATTCCTGGCTCTGTCAGCATGCCTCACATAGGAACTGAGATCTTTGCATCAAGCTCTTTCAATTGTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR TCA 90 bp | TCATCCAACAAGCATCTCTGCATCAGGAAATCATGTCTTGGGGTTTaGCACAGAGAAAAGAGGTGCCGGCTGCATTCAGTGGAGAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: SSNKHLCIRKSCLGV*HREKRCRLHSVEKG Trigger: CCCTTTCTCCACTGAATGCAGCCGGCACCTCTTTTCTCTGTGTCAAACCCCAAGACATGATTTCCTGATGCAGAGATGCTTGTTGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 90 bp | GTAGGGATCATCCAACAAGCATCTCTGCATCAGGAAATCATGTCTTaGGGTTTGACACAGAGAAAAGAGGTGCCGGCTGCATTCAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: VGIIQQASLHQEIMS*GLTQRKEVPAAFSG Trigger: TCCACTGAATGCAGCCGGCACCTCTTTTCTCTGTGTCAAACCCCAAGACATGATTTCCTGATGCAGAGATGCTTGTTGGATGATCCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 90 bp | TGTGTGGGGTTCGGAAGGAGAGCACCCCAAGACAGAGAACAAACTTaGTCTCTATATCTCTTAGTGACCCTGAATCTCATTGCTGTTAGC | + |
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Preference number: 1 (lower is better) Translates to: CVGFGRRAPQDREQT*SLYLLVTLNLIAVS Trigger: GCTAACAGCAATGAGATTCAGGGTCACTAAGAGATATAGAGACCAAGTTTGTTCTCTGTCTTGGGGTGCTCTCCTTCCGAACCCCACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 90 bp | ACCTCTTCTAGTTCCTCAGCATCCCTAAATAGTTGTCATGTTGAGTaGTCTCAGTGCTTGTCACCGCAATGGCACCATGAACTGTTGACA | + |
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Preference number: 1 (lower is better) Translates to: TSSSSSASLNSCHVE*SQCLSPQWHHELLT Trigger: TGTCAACAGTTCATGGTGCCATTGCGGTGACAAGCACTGAGACCACTCAACATGACAACTATTTAGGGATGCTGAGGAACTAGAAGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 90 bp | TCTCTATATCTCTTAGTGACCCTGAATCTCATTGCTGTTAGCGTCTaGGACCTAATTCCTTGGGGACTGCAGAATGTTCTGAAAGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: SLYLLVTLNLIAVSV*DLIPWGLQNVLKGP Trigger: TGGGCCTTTCAGAACATTCTGCAGTCCCCAAGGAATTAGGTCCCAGACGCTAACAGCAATGAGATTCAGGGTCACTAAGAGATATAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CAA 90 bp | AACTCTTCCACACCAGGCACTCCCATTGTCCCCTTGTGCCCATCTTaGGGCCAGTGTTCTATTTCCCTTTGTCCTGGTCTGACCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: NSSTPGTPIVPLCPS*GQCSISLCPGLTPP Trigger: TGGAGGGGTCAGACCAGGACAAAGGGAAATAGAACACTGGCCCAAAGATGGGCACAAGGGGACAATGGGAGTGCCTGGTGTGGAAGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR-3UTR TCA 90 bp | CTCCACTACTCACGATGGAGGGTCCAGCTACTGAGCTCTCTCACCCAGCTCAGGGGCACCATGAACTGTTaGCAAGGAGGATATGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: LHYSRWRVQLLSSLTQLRGTMNC*QGGYEV Trigger: GACTTCATATCCTCCTTGTCAACAGTTCATGGTGCC...CCTGAGCTGGGTGAGAGAGCTCAGTAGCTGGACCCTCCATCGTGAGTAGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTACACAGGACAGTTCAGAGCAGGTTAGTCACCTGATGGGGCCCTGGGAAGTACCCCTGTCCCTCTaGCATTTCCTGCAAAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: QATQDSSEQVSHLMGPWEVPLSL*HFLQSA Trigger: TGCACTTTGCAGGAAATGTCAGAGGGACAGGGGTAC...TTCCCAGGGCCCCATCAGGTGACTAACCTGCTCTGAACTGTCCTGTGTAGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR-3UTR TCA 90 bp | AGCAGATCTCCTAGGTCTGTCGAGGTGCTGTGTGTGGGGTTCGGAAGGAGAGCATGTAGCATAGAACAGTaGGACATGACACTGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: SRSPRSVEVLCVGFGRRACSIEQ*DMTLRG Trigger: TCCCCTCAGTGTCATGTCTCACTGTTCTATGCTACA...TGCTCTCCTTCCGAACCCCACACACAGCACCTCGACAGACCTAGGAGATCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR-3UTR CCA 90 bp | AATTCCTTGGGGACTGCAGAATGTTCTGAAAGGCCCAATCCGCTGGGCTTCTATTGTGCCCCACTCCTTTaGGAAGTACCCCTGTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: NSLGTAECSERPNPLGFYCAPLL*EVPLSL Trigger: GAGGGACAGGGGTACTTCCCAAAGGAGTGGGGCACA...ATAGAAGCCCAGCGGATTGGGCCTTTCAGAACATTCTGCAGTCCCCAAGGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CAA 90 bp | AGTGTTGTGCAGAACTCTTCCACACCAGGCACTCCCATTGTCCCCTaGTGCCCATCTTTGGGCCAGTGTTCTATTTCCCTTTGTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: SVVQNSSTPGTPIVP*CPSLGQCSISLCPG Trigger: ACCAGGACAAAGGGAAATAGAACACTGGCCCAAAGATGGGCACAAGGGGACAATGGGAGTGCCTGGTGTGGAAGAGTTCTGCACAACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CAA 90 bp | GAATCCACAGTGTTGTGCAGAACTCTTCCACACCAGGCACTCCCATaGTCCCCTTGTGCCCATCTTTGGGCCAGTGTTCTATTTCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: ESTVLCRTLPHQALP*SPCAHLWASVLFPF Trigger: AAAGGGAAATAGAACACTGGCCCAAAGATGGGCACAAGGGGACAATGGGAGTGCCTGGTGTGGAAGAGTTCTGCACAACACTGTGGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CAA 90 bp | TGCAACCCACGACACAGGTTGAAAGCCACTGCTCTAGAACTTTCTTaGTGCCCCACTCCTTTGGGAAGTACCCCTGTCCCTCTGACATTT | + |
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Preference number: 2 (lower is better) Translates to: CNPRHRLKATALELS*CPTPLGSTPVPLTF Trigger: AAATGTCAGAGGGACAGGGGTACTTCCCAAAGGAGTGGGGCACAAAGAAAGTTCTAGAGCAGTGGCTTTCAACCTGTGTCGTGGGTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CAA 90 bp | AAAGGGTCGTTTGACTCCCTGAAGGGTTGCAACCCACGACACAGGTaGAAAGCCACTGCTCTAGAACTTTCTTTGTGCCCCACTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: KGSFDSLKGCNPRHR*KATALELSLCPTPL Trigger: CAAAGGAGTGGGGCACAAAGAAAGTTCTAGAGCAGTGGCTTTCAACCTGTGTCGTGGGTTGCAACCCTTCAGGGAGTCAAACGACCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CAA 90 bp | GAATTGAGGACCAGGTCCCTGTGGACAGCAAGAAGGGTGCCAACATaGGAGACTGCCTTCTTACTTTGTCCTCTTGATTTGAAGGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: ELRTRSLWTARRVPT*ETAFLLCPLDLKVA Trigger: GGCTACCTTCAAATCAAGAGGACAAAGTAAGAAGGCAGTCTCCAATGTTGGCACCCTTCTTGCTGTCCACAGGGACCTGGTCCTCAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CAA 90 bp | AGGTTGAAAGCCACTGCTCTAGAACTTTCTTTGTGCCCCACTCCTTaGGGAAGTACCCCTGTCCCTCTGACATTTCCTGCAAAGTGCATA | + |
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Preference number: 2 (lower is better) Translates to: RLKATALELSLCPTP*GSTPVPLTFPAKCI Trigger: TATGCACTTTGCAGGAAATGTCAGAGGGACAGGGGTACTTCCCAAAGGAGTGGGGCACAAAGAAAGTTCTAGAGCAGTGGCTTTCAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CAA 90 bp | AAGCTTTGGTATTATGTAGCAGTTCTGGAGCCTAAAGCTACCAGGTaGGTTTCTCTCCACTACTCACGATGGAGGGTCCAGCTACTGAGC | + |
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Preference number: 2 (lower is better) Translates to: KLWYYVAVLEPKATR*VSLHYSRWRVQLLS Trigger: GCTCAGTAGCTGGACCCTCCATCGTGAGTAGTGGAGAGAAACCAACCTGGTAGCTTTAGGCTCCAGAACTGCTACATAATACCAAAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CAA 90 bp | ATCATCCAACAAGCATCTCTGCATCAGGAAATCATGTCTTGGGGTTaGACACAGAGAAAAGAGGTGCCGGCTGCATTCAGTGGAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: IIQQASLHQEIMSWG*TQRKEVPAAFSGER Trigger: CCTTTCTCCACTGAATGCAGCCGGCACCTCTTTTCTCTGTGTCAAACCCCAAGACATGATTTCCTGATGCAGAGATGCTTGTTGGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR-3UTR CCA 90 bp | ATTGCTGTTAGCGTCTGGGACCTAATTCCTTGGGGACTGCAGAATGTTCTGAAATATTTCCCTTTGTCCTaGTCTGACCCCTCCATCCCT | + |
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Preference number: 2 (lower is better) Translates to: IAVSVWDLIPWGLQNVLKYFPLS*SDPSIP Trigger: AGGGATGGAGGGGTCAGACCAGGACAAAGGGAAATA...TTTCAGAACATTCTGCAGTCCCCAAGGAATTAGGTCCCAGACGCTAACAGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAACAAACTTGGTCTCTATATCTCTTAGTGACCCTGAATCTCATTGCTGTCCCTTTGTCCTGGTCTaGCCCCTCCATCCCTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: QRTNLVSISLSDPESHCCPFVLV*PLHPFV Trigger: AACAAAGGGATGGAGGGGTCAGACCAGGACAAAGGG...ACAGCAATGAGATTCAGGGTCACTAAGAGATATAGAGACCAAGTTTGTTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAACAAACTTGGTCTCTATATCTCTTAGTGACCCTGAATCTCATTGCTGTGCAGAGACTCTGCCCTaGAGGAGCACACAATTGAAA | + |
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Preference number: 2 (lower is better) Translates to: QRTNLVSISLSDPESHCCAETLP*RSTQLK Trigger: TTTCAATTGTGTGCTCCTTCAGGGCAGAGTCTCTGC...ACAGCAATGAGATTCAGGGTCACTAAGAGATATAGAGACCAAGTTTGTTCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CAA 90 bp | AGGGTGCCAACATTGGAGACTGCCTTCTTACTTTGTCCTCTTGATTaGAAGGTAGCCCTGATCCCTTGTAGAAATTGCTATACCTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: RVPTLETAFLLCPLD*KVALIPCRNCYTSF Trigger: AAAAGAGGTATAGCAATTTCTACAAGGGATCAGGGCTACCTTCAAATCAAGAGGACAAAGTAAGAAGGCAGTCTCCAATGTTGGCACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR-3UTR TCA 90 bp | TTCTATGCAATGAAGGGTCGTGGAATATTACAAGTAAAAGAACAAGCTACACAGTCACCCAGCTCAGGATaGGTGAAAGCAACAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: FYAMKGRGILQVKEQATQSPSSG*VKATRA Trigger: TGCTCTTGTTGCTTTCACTCATCCTGAGCTGGGTGA...CTGTGTAGCTTGTTCTTTTACTTGTAATATTCCACGACCCTTCATTGCATAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR-3UTR CAA 90 bp | CTCCACTACTCACGATGGAGGGTCCAGCTACTGAGCTCTCTCACCCAGCTCAGGCCCTTGTGCCCATCTTaGGGCCAGTGTTCTATTTCC | + |
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Preference number: 3 (lower is better) Translates to: LHYSRWRVQLLSSLTQLRPLCPS*GQCSIS Trigger: GGAAATAGAACACTGGCCCAAAGATGGGCACAAGGG...CCTGAGCTGGGTGAGAGAGCTCAGTAGCTGGACCCTCCATCGTGAGTAGTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR TCA 72 bp | AGTTCCTATGTGAGGCATGCTGACAGAGCCAGGAATTaGGGACCAGGTCCCTGTGGACAGCAAGAAGGGTGC | + |
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Preference number: 3 (lower is better) Translates to: SSYVRHADRARN*GPGPCGQQEGC Trigger: GCACCCTTCTTGCTGTCCACAGGGACCTGGTCCTCAATTCCTGGCTCTGTCAGCATGCCTCACATAGGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 72 bp | GAGCAGGTTAGTCACCTGATGGGGCCCTGGGAAGACTaGGGAAGAGTCCTCCCCCAAAGCTTTGGTATTATG | + |
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Preference number: 3 (lower is better) Translates to: EQVSHLMGPWED*GRVLPQSFGIM Trigger: CATAATACCAAAGCTTTGGGGGAGGACTCTTCCCCAGTCTTCCCAGGGCCCCATCAGGTGACTAACCTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR TCA 72 bp | CCAGCTACTGAGCTCTCTCACCCAGCTCAGGATGAGTaGAAGCAACAAGAGCAGAGACTCTGCCCTGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: PATELSHPAQDE*KQQEQRLCPEG Trigger: TCCTTCAGGGCAGAGTCTCTGCTCTTGTTGCTTTCACTCATCCTGAGCTGGGTGAGAGAGCTCAGTAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 72 bp | AAAGCTACCAGGTTGGTTTCTCTCCACTACTCACGATaGAGGGTCCAGCTACTGAGCTCTCTCACCCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: KATRLVSLHYSR*RVQLLSSLTQL Trigger: GAGCTGGGTGAGAGAGCTCAGTAGCTGGACCCTCCATCGTGAGTAGTGGAGAGAAACCAACCTGGTAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR GCA 72 bp | GAAGGGTTGCAACCCACGACACAGGTTGAAAGCCACTaGTCTAGAACTTTCTTTGTGCCCCACTCCTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: EGLQPTTQVESH*SRTFFVPHSFG Trigger: CCCAAAGGAGTGGGGCACAAAGAAAGTTCTAGAGCAGTGGCTTTCAACCTGTGTCGTGGGTTGCAACCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR TCA 72 bp | CTCAGTGCTTGTCACCGCAATGGCACCATGAACTGTTaGCAAGGAGGATATGAAGTCCAGGCTAGATCAGGG | + |
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Preference number: 3 (lower is better) Translates to: LSACHRNGTMNC*QGGYEVQARSG Trigger: CCCTGATCTAGCCTGGACTTCATATCCTCCTTGTCAACAGTTCATGGTGCCATTGCGGTGACAAGCACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 72 bp | CTGGGAAGACTGGGGAAGAGTCCTCCCCCAAAGCTTTaGTATTATGTAGCAGTTCTGGAGCCTAAAGCTACC | + |
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Preference number: 3 (lower is better) Translates to: LGRLGKSPPPKL*YYVAVLEPKAT Trigger: GGTAGCTTTAGGCTCCAGAACTGCTACATAATACCAAAGCTTTGGGGGAGGACTCTTCCCCAGTCTTCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR GCA 72 bp | TCCTTTGGGAAGTACCCCTGTCCCTCTGACATTTCCTaGAAAGTGCATAGAGACAGGTTCAGTGCAGACTCT | + |
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Preference number: 3 (lower is better) Translates to: SFGKYPCPSDIS*KVHRDRFSADS Trigger: AGAGTCTGCACTGAACCTGTCTCTATGCACTTTGCAGGAAATGTCAGAGGGACAGGGGTACTTCCCAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 72 bp | AATCTCATTGCTGTTAGCGTCTGGGACCTAATTCCTTaGGGACTGCAGAATGTTCTGAAAGGCCCAATCCGC | + |
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Preference number: 3 (lower is better) Translates to: NLIAVSVWDLIP*GLQNVLKGPIR Trigger: GCGGATTGGGCCTTTCAGAACATTCTGCAGTCCCCAAGGAATTAGGTCCCAGACGCTAACAGCAATGAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR-3UTR CAA 90 bp | AATTCCTTGGGGACTGCAGAATGTTCTGAAAGGCCCAATCCGCTGGGCTTCTATCCTAAAGCTACCAGGTaGGTTTCTCTCCACTACTCA | + |
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Preference number: 3 (lower is better) Translates to: NSLGTAECSERPNPLGFYPKATR*VSLHYS Trigger: TGAGTAGTGGAGAGAAACCAACCTGGTAGCTTTAGG...ATAGAAGCCCAGCGGATTGGGCCTTTCAGAACATTCTGCAGTCCCCAAGGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 72 bp | CTCTTAGTGACCCTGAATCTCATTGCTGTTAGCGTCTaGGACCTAATTCCTTGGGGACTGCAGAATGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LLVTLNLIAVSV*DLIPWGLQNVL Trigger: CAGAACATTCTGCAGTCCCCAAGGAATTAGGTCCCAGACGCTAACAGCAATGAGATTCAGGGTCACTAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CCA 72 bp | ATCCAACAAGCATCTCTGCATCAGGAAATCATGTCTTaGGGTTTGACACAGAGAAAAGAGGTGCCGGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: IQQASLHQEIMS*GLTQRKEVPAA Trigger: TGCAGCCGGCACCTCTTTTCTCTGTGTCAAACCCCAAGACATGATTTCCTGATGCAGAGATGCTTGTTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR-3UTR CAA 90 bp | ATTGCTGTTAGCGTCTGGGACCTAATTCCTTGGGGACTGCAGAATGTTCTGAAACATATCACCACCATGTaGTCATCACCTACAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: IAVSVWDLIPWGLQNVLKHITTM*SSPTEQ Trigger: CTGCTCTGTAGGTGATGACAACATGGTGGTGATATG...TTTCAGAACATTCTGCAGTCCCCAAGGAATTAGGTCCCAGACGCTAACAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR TCA 72 bp | CACCTAGATCAGTGGTTCTCAACCTTCCTAATGCTATaGCCCTTTACAGTTCCTCATGTTGTGACCCCAACC | + |
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Preference number: 3 (lower is better) Translates to: HLDQWFSTFLML*PFTVPHVVTPT Trigger: GGTTGGGGTCACAACATGAGGAACTGTAAAGGGTCATAGCATTAGGAAGGTTGAGAACCACTGATCTAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR TCA 72 bp | TTGAAAGAGCTTGATGCAAAGATCTCAGTTCCTATGTaGGGCATGCTGACAGAGCCAGGAATTGAGGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LKELDAKISVPM*GMLTEPGIEDQ Trigger: CTGGTCCTCAATTCCTGGCTCTGTCAGCATGCCTCACATAGGAACTGAGATCTTTGCATCAAGCTCTTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| 3UTR TCA 72 bp | GACTCTGCCCTGAAGGAGCACACAATTGAAAGAGCTTaGTGCAAAGATCTCAGTTCCTATGTGAGGCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: DSALKEHTIERA*CKDLSSYVRHA Trigger: AGCATGCCTCACATAGGAACTGAGATCTTTGCATCAAGCTCTTTCAATTGTGTGCTCCTTCAGGGCAGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| 3UTR GCA 72 bp | GCATCCCTAAATAGTTGTCATGTTGAGTGGTCTCAGTaGTTGTCACCGCAATGGCACCATGAACTGTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: ASLNSCHVEWSQ*LSPQWHHELLT Trigger: TGTCAACAGTTCATGGTGCCATTGCGGTGACAAGCACTGAGACCACTCAACATGACAACTATTTAGGGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| 3UTR CCA 72 bp | AGTTCCTCAGCATCCCTAAATAGTTGTCATGTTGAGTaGTCTCAGTGCTTGTCACCGCAATGGCACCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSSASLNSCHVE*SQCLSPQWHHE Trigger: TTCATGGTGCCATTGCGGTGACAAGCACTGAGACCACTCAACATGACAACTATTTAGGGATGCTGAGGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| 3UTR TCA 72 bp | CAAGAGCAGAGACTCTGCCCTGAAGGAGCACACAATTaGAAGAGCTTGATGCAAAGATCTCAGTTCCTATGT | + |
|
Preference number: 3 (lower is better) Translates to: QEQRLCPEGAHN*KSLMQRSQFLC Trigger: ACATAGGAACTGAGATCTTTGCATCAAGCTCTTTCAATTGTGTGCTCCTTCAGGGCAGAGTCTCTGCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| 3UTR CCA 72 bp | GCCCAATCCGCTGGGCTTCTATGCAATGAAGGGTCGTaGAATATTACAAGTAAAAGAACAAGCTACACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: AQSAGLLCNEGS*NITSKRTSYTG Trigger: TCCTGTGTAGCTTGTTCTTTTACTTGTAATATTCCACGACCCTTCATTGCATAGAAGCCCAGCGGATTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| 3UTR-3UTR CAA 90 bp | GGTCGTGGAATATTACAAGTAAAAGAACAAGCTACACAGGACAGTTCAGAGCAGCTTTGTCCTCTTGATTaGAAGGTAGCCCTGATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GRGILQVKEQATQDSSEQLCPLD*KVALIP Trigger: AGGGATCAGGGCTACCTTCAAATCAAGAGGACAAAG...CTGCTCTGAACTGTCCTGTGTAGCTTGTTCTTTTACTTGTAATATTCCACGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| 3UTR CCA 72 bp | TTCGGAAGGAGAGCACCCCAAGACAGAGAACAAACTTaGTCTCTATATCTCTTAGTGACCCTGAATCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: FGRRAPQDREQT*SLYLLVTLNLI Trigger: AATGAGATTCAGGGTCACTAAGAGATATAGAGACCAAGTTTGTTCTCTGTCTTGGGGTGCTCTCCTTCCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| 3UTR-3UTR CAA 90 bp | GGAATATTACAAGTAAAAGAACAAGCTACACAGGACAGTTCAGAGCAGGTTAGTGACACTGAGGGGAACTaGAAGGCTCCAAAGTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GILQVKEQATQDSSEQVSDTEGN*KAPKCF Trigger: AAAGCACTTTGGAGCCTTCAAGTTCCCCTCAGTGTC...ACTAACCTGCTCTGAACTGTCCTGTGTAGCTTGTTCTTTTACTTGTAATATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| CDS-3UTR GCA 90 bp | GATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCCTCCTCGGCATGGGTGTaGGAGCCTTGCTGGGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DGSSHRRAEDGCPGHLGASSAWV*EPCWAN Trigger: GTTGGCCCAGCAAGGCTCGCACACCCATGCCGAGGA...GGCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCCACCTGGGATGGAGTCTTaGCCTCAGGCCCCATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MAPVTEEQKMVVQATLEPPGMES*PQAPWP Trigger: GGGCCATGGGGCCTGAGGCCAAGACTCCATCCCAGG...TGGCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | AGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCCCTGGGATGGAGTCTTaGCCTCAGGCCCCATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RWLQSQKSRRWLSRPPWSPGMES*PQAPWP Trigger: GGGCCATGGGGCCTGAGGCCAAGACTCCATCCCAGG...GCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | CTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGTGGCCTCAGGCCCCATaGCCCTCAGATGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEMAPVTEEQKMVVQATLWPQAP*PSDAGC Trigger: GCAGCCTGCATCTGAGGGCCATGGGGCCTGAGGCCA...CAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCCCTCAGATGCAGGCTaGCATGGCCATAGAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: EMAPVTEEQKMVVQATLEPSDAG*HGHRGH Trigger: GTGTCCTCTATGGCCATGGCAGCCTGCATCTGAGGG...CTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCCAACATGGTGTGCGAGCCTTGCTaGGCCAACACTGCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SSHRRAEDGCPGHLGANMVCEPC*ANTAGI Trigger: GATGCCAGCAGTGTTGGCCCAGCAAGGCTCGCACAC...CATGTTGGCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR TCA 90 bp | GAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGGTCCAAAGCGCACGATaGCCACATCGGAAGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EMAPVTEEQKMVVQATLEVQSAR*PHRKCW Trigger: CCAACACTTCCGATGTGGTCATCGTGCGCTTTGGAC...CTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | CTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGCCCGTGAAGAAGAGGTaGGCCTTGGTCATGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LEMAPVTEEQKMVVQATLPVKKR*ALVMWV Trigger: GACCCACATGACCAAGGCCCACCTCTTCTTCACGGG...CAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | AGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCTCTTGTAGATGGCTaGGGGCACCCAGTGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDGSSHRRAEDGCPGHLGALVDG*GHPVHS Trigger: ACTGTGCACTGGGTGCCCCCAGCCATCTACAAGAGC...TCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCCAACGAGTGGGATGACCAGTaGGGTGGATGGGATAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSHRRAEDGCPGHLGANEWDDQ*GGWDNF Trigger: GAAATTATCCCATCCACCTCACTGGTCATCCCACTC...GTTGGCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR TCA 90 bp | GATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCCGAGTGGGATGACCAGTaGGGTGGATGGGATAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: DGSSHRRAEDGCPGHLGAEWDDQ*GGWDNF Trigger: GAAATTATCCCATCCACCTCACTGGTCATCCCACTC...GGCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR GCA 90 bp | GTGCAGACTCTGAGCTTCTTCTTGGGCCTGGGTCAAAAATATCCCAACTTGCCTACCGTCCGCTCCATCTaGTCCAGGTCGATCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQTLSFFLGLGQKYPNLPTVRSI*SRSILA Trigger: GGCCAAGATCGACCTGGAGCAGATGGAGCGGACGGT...AGGCAAGTTGGGATATTTTTGACCCAGGCCCAAGAAGAAGCTCAGAGTCTGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| CDS-3UTR GCA 90 bp | GCTATTCTGCCTCAAGCATCCACCAGGGCACCTAGATCAGTGGTTCTCAACCTTCCCTCAGATGCAGGCTaGCATGGCCATAGAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: AILPQASTRAPRSVVLNLPSDAG*HGHRGH Trigger: GTGTCCTCTATGGCCATGGCAGCCTGCATCTGAGGG...AAGGTTGAGAACCACTGATCTAGGTGCCCTGGTGGATGCTTGAGGCAGAATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| CDS-3UTR CCA 90 bp | GGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCCAACAGATGTATCCAGAACTaGAAAGCAGGATGGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSHRRAEDGCPGHLGANRCIQN*KAGWEG Trigger: CCCCTCCCATCCTGCTTTCCAGTTCTGGATACATCT...GTTGGCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | AATTCCTTGGGGACTGCAGAATGTTCTGAAAGGCCCAATCCGCTGGGCTTCTATGTGTGCGAGCCTTGCTaGGCCAACACTGCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: NSLGTAECSERPNPLGFYVCEPC*ANTAGI Trigger: GATGCCAGCAGTGTTGGCCCAGCAAGGCTCGCACAC...ATAGAAGCCCAGCGGATTGGGCCTTTCAGAACATTCTGCAGTCCCCAAGGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| 3UTR CAA 72 bp | ACACCAGGCACTCCCATTGTCCCCTTGTGCCCATCTTaGGGCCAGTGTTCTATTTCCCTTTGTCCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPGTPIVPLCPS*GQCSISLCPGL Trigger: CAGACCAGGACAAAGGGAAATAGAACACTGGCCCAAAGATGGGCACAAGGGGACAATGGGAGTGCCTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| 3UTR CAA 72 bp | GTGTTGTGCAGAACTCTTCCACACCAGGCACTCCCATaGTCCCCTTGTGCCCATCTTTGGGCCAGTGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VLCRTLPHQALP*SPCAHLWASVL Trigger: TAGAACACTGGCCCAAAGATGGGCACAAGGGGACAATGGGAGTGCCTGGTGTGGAAGAGTTCTGCACAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| CDS-3UTR CCA 90 bp | AGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCAGATGTATCCAGAACTaGAAAGCAGGATGGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RWLQSQKSRRWLSRPPWSRCIQN*KAGWEG Trigger: CCCCTCCCATCCTGCTTTCCAGTTCTGGATACATCT...GCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCGCTGAGCTTCAGACCTaGAGAGCCATGGAGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILEMAPVTEEQKMVVQATAELQT*RAMELH Trigger: ATGGAGCTCCATGGCTCTCCAGGTCTGAAGCTCAGC...GGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCCAACATAGGATCTCACTAGCCTaGGATGGAGTCTTGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSQKSRRWLSRPPWSQHRISLA*DGVLAS Trigger: TGAGGCCAAGACTCCATCCCAGGCTAGTGAGATCCT...ATGTTGGCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| 3UTR CAA 72 bp | CAGAACTCTTCCACACCAGGCACTCCCATTGTCCCCTaGTGCCCATCTTTGGGCCAGTGTTCTATTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QNSSTPGTPIVP*CPSLGQCSISL Trigger: AAGGGAAATAGAACACTGGCCCAAAGATGGGCACAAGGGGACAATGGGAGTGCCTGGTGTGGAAGAGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| CDS-3UTR GCA 90 bp | CAAGCTACACAGGACAGTTCAGAGCAGGTTAGTCACCTGATGGGGCCCTGGGAAAGCAGTCGTACTTCTTaGTGTTATAGGTTCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QATQDSSEQVSHLMGPWESSRTS*CYRFRW Trigger: CCACCGGAACCTATAACAGCAAGAAGTACGACTGCT...TTCCCAGGGCCCCATCAGGTGACTAACCTGCTCTGAACTGTCCTGTGTAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| CDS-3UTR CCA 90 bp | AATATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCCCCGTGAAGAAGAGGTaGGCCTTGGTCATGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NILEMAPVTEEQKMVVQAPVKKR*ALVMWV Trigger: GACCCACATGACCAAGGCCCACCTCTTCTTCACGGG...GGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR TCA 90 bp | AGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCTTTCTGTATTTGAGGTaGCAGCAGGATCTCACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RWLQSQKSRRWLSRPPWSFLYLR*QQDLTS Trigger: GCTAGTGAGATCCTGCTGTCACCTCAAATACAGAAA...GCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR TCA 90 bp | ATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCCATTTCTGTATTTGAGGTaGCAGCAGGATCTCACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: MAPVTEEQKMVVQATLEPFLYLR*QQDLTS Trigger: GCTAGTGAGATCCTGCTGTCACCTCAAATACAGAAA...TGGCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR GCA 90 bp | AATTCCTTGGGGACTGCAGAATGTTCTGAAAGGCCCAATCCGCTGGGCTTCTATTTGCTGGGCCAACACTaGTGGCATCAGAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: NSLGTAECSERPNPLGFYLLGQH*WHQKQT Trigger: TGTCTGCTTCTGATGCCAGCAGTGTTGGCCCAGCAA...ATAGAAGCCCAGCGGATTGGGCCTTTCAGAACATTCTGCAGTCCCCAAGGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| CDS-3UTR GCA 90 bp | AAAGAATATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCATCCTCGGCATGGGTGTaGGAGCCTTGCTGGGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KEYSRDGSSHRRAEDGCPSSAWV*EPCWAN Trigger: GTTGGCCCAGCAAGGCTCGCACACCCATGCCGAGGA...TGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAATATTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAGAATATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCGCTGGGGGCACCCAGTaGACAGTGCCCGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QKNILEMAPVTEEQKMVVAGGTQ*TVPVKK Trigger: CTTCTTCACGGGCACTGTGCACTGGGTGCCCCCAGC...GACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAATATTCTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGAATATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTTGGCCTCAGGCCCCATaGCCCTCAGATGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKEYSRDGSSHRRAEDGCWPQAP*PSDAGC Trigger: GCAGCCTGCATCTGAGGGCCATGGGGCCTGAGGCCA...ACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAATATTCTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| 3UTR CAA 72 bp | CTTGTGCCCATCTTTGGGCCAGTGTTCTATTTCCCTTaGTCCTGGTCTGACCCCTCCATCCCTTTGTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVPIFGPVFYFP*SWSDPSIPLFD Trigger: GTCAAACAAAGGGATGGAGGGGTCAGACCAGGACAAAGGGAAATAGAACACTGGCCCAAAGATGGGCACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| 3UTR CAA 72 bp | TTTGACTCCCTGAAGGGTTGCAACCCACGACACAGGTaGAAAGCCACTGCTCTAGAACTTTCTTTGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FDSLKGCNPRHR*KATALELSLCP Trigger: GGGGCACAAAGAAAGTTCTAGAGCAGTGGCTTTCAACCTGTGTCGTGGGTTGCAACCCTTCAGGGAGTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| CDS-3UTR TCA 90 bp | GCAGCCTTCACCTCTTCTAGTTCCTCAGCATCCCTAAATAGTTGTCATGTTGAGGTCCAAAGCGCACGATaGCCACATCGGAAGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAFTSSSSSASLNSCHVEVQSAR*PHRKCW Trigger: CCAACACTTCCGATGTGGTCATCGTGCGCTTTGGAC...CTCAACATGACAACTATTTAGGGATGCTGAGGAACTAGAAGAGGTGAAGGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
||
| CDS-3UTR TCA 90 bp | AATATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCAATGATAAGTGGGGCTaGGCTTCAGACCTGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NILEMAPVTEEQKMVVQANDKWG*ASDLES Trigger: GCTCTCCAGGTCTGAAGCTCAGCCCCACTTATCATT...GGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAGAATATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCACCGTCCGCTCCATCTaGTCCAGGTCGATCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKNILEMAPVTEEQKMVVTVRSI*SRSILA Trigger: GGCCAAGATCGACCTGGAGCAGATGGAGCGGACGGT...GACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAATATTCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR GCA 90 bp | CTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGAGAGTCTGGGAGGCCTaGACACATACATATGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEMAPVTEEQKMVVQATLRVWEA*THTYVF Trigger: GAAAACATATGTATGTGTGCAGGCCTCCCAGACTCT...CAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | AAGAATATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCTCTTGTAGATGGCTaGGGGCACCCAGTGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNILEMAPVTEEQKMVVQALVDG*GHPVHS Trigger: ACTGTGCACTGGGTGCCCCCAGCCATCTACAAGAGC...CTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAATATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCCAACATGCTTCAGCATCCATGTTaGTCTCCAGCCAATGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSHRRAEDGCPGHLGANMLQHPC*SPANDK Trigger: CTTATCATTGGCTGGAGACCAACATGGATGCTGAAG...CATGTTGGCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | AATATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCAGGATCTCACTAGCCTaGGATGGAGTCTTGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NILEMAPVTEEQKMVVQARISLA*DGVLAS Trigger: TGAGGCCAAGACTCCATCCCAGGCTAGTGAGATCCT...GGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAATATT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| 3UTR CAA 72 bp | ATAGAGACAGGTTCAGTGCAGACTCTGAGCTTCTTCTaGGGCCTGGGTCAAAAATATCCCAACTTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IETGSVQTLSFF*GLGQKYPNLPP Trigger: GGGAGGCAAGTTGGGATATTTTTGACCCAGGCCCAAGAAGAAGCTCAGAGTCTGCACTGAACCTGTCTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CAA 72 bp | ACCAGGTCCCTGTGGACAGCAAGAAGGGTGCCAACATaGGAGACTGCCTTCTTACTTTGTCCTCTTGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRSLWTARRVPT*ETAFLLCPLDL Trigger: CAAATCAAGAGGACAAAGTAAGAAGGCAGTCTCCAATGTTGGCACCCTTCTTGCTGTCCACAGGGACCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| 3UTR CAA 72 bp | CAAGCATCTCTGCATCAGGAAATCATGTCTTGGGGTTaGACACAGAGAAAAGAGGTGCCGGCTGCATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QASLHQEIMSWG*TQRKEVPAAFS Trigger: ACTGAATGCAGCCGGCACCTCTTTTCTCTGTGTCAAACCCCAAGACATGATTTCCTGATGCAGAGATGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| CDS-3UTR CCA 90 bp | CAAAAGAATATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCGCTGAGCTTCAGACCTaGAGAGCCATGGAGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QKNILEMAPVTEEQKMVVAELQT*RAMELH Trigger: ATGGAGCTCCATGGCTCTCCAGGTCTGAAGCTCAGC...GACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAATATTCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS-3UTR CCA 90 bp | AATTCCTTGGGGACTGCAGAATGTTCTGAAAGGCCCAATCCGCTGGGCTTCTATCTTCAGCATCCATGTTaGTCTCCAGCCAATGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSLGTAECSERPNPLGFYLQHPC*SPANDK Trigger: CTTATCATTGGCTGGAGACCAACATGGATGCTGAAG...ATAGAAGCCCAGCGGATTGGGCCTTTCAGAACATTCTGCAGTCCCCAAGGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| CDS-3UTR CCA 90 bp | GGAATATTACAAGTAAAAGAACAAGCTACACAGGACAGTTCAGAGCAGGTTAGTGGAAGTGTTGGGCACTaGCCGTGCCCAGCGATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GILQVKEQATQDSSEQVSGSVGH*PCPAIV Trigger: TACAATCGCTGGGCACGGCCAGTGCCCAACACTTCC...ACTAACCTGCTCTGAACTGTCCTGTGTAGCTTGTTCTTTTACTTGTAATATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| CDS-3UTR GCA 90 bp | TCAAAAGAATATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTTTGCTGGGCCAACACTaGTGGCATCAGAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SKEYSRDGSSHRRAEDGCLLGQH*WHQKQT Trigger: TGTCTGCTTCTGATGCCAGCAGTGTTGGCCCAGCAA...ACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAATATTCTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS-3UTR GCA 90 bp | CAAAAGAATATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCAGCAGTCGTACTTCTTaGTGTTATAGGTTCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKNILEMAPVTEEQKMVVSSRTS*CYRFRW Trigger: CCACCGGAACCTATAACAGCAAGAAGTACGACTGCT...GACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAATATTCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS-3UTR GCA 90 bp | TCAAAAGAATATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTAGAGTCTGGGAGGCCTaGACACATACATATGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKEYSRDGSSHRRAEDGCRVWEA*THTYVF Trigger: GAAAACATATGTATGTGTGCAGGCCTCCCAGACTCT...ACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAATATTCTTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
||
| CDS-3UTR CCA 90 bp | AAGAATATTCTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGTTAGCCAGACATTGGTaGTCATCATTTGATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNILEMAPVTEEQKMVVQLARHW*SSFDSS Trigger: AGAAGAATCAAATGATGACCACCAATGTCTGGCTAA...CTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAGAATATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS-3UTR CCA 90 bp | GGAATATTACAAGTAAAAGAACAAGCTACACAGGACAGTTCAGAGCAGGTTAGTTTAGCCAGACATTGGTaGTCATCATTTGATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GILQVKEQATQDSSEQVSLARHW*SSFDSS Trigger: AGAAGAATCAAATGATGACCACCAATGTCTGGCTAA...ACTAACCTGCTCTGAACTGTCCTGTGTAGCTTGTTCTTTTACTTGTAATATTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| CDS TCA 90 bp | TGGGCACTGGCCGTGCCCAGCGATTGTAGCCTCCAAAGAGGTGTTTaGACAGGCGGTCCTCGGCATGGGTGTGCGAGCCTTGCTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WALAVPSDCSLQRGV*TGGPRHGCASLAGP Trigger: TGGCCCAGCAAGGCTCGCACACCCATGCCGAGGACCGCCTGTTCAAACACCTCTTTGGAGGCTACAATCGCTGGGCACGGCCAGTGCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS GCA 90 bp | TCCAAAGCGCACGATGACCACATCGGAAGTGTTGGGCACTGGCCGTaGCCAGCGATTGTAGCCTCCAAAGAGGTGTTTGAACAGGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SKAHDDHIGSVGHWP*PAIVASKEVFEQAV Trigger: GACCGCCTGTTCAAACACCTCTTTGGAGGCTACAATCGCTGGGCACGGCCAGTGCCCAACACTTCCGATGTGGTCATCGTGCGCTTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CCA 90 bp | CATGTTGGTCTCCAGCCAATGATAAGTGGGGCTGAGCTTCAGACCTaGAGAGCCATGGAGCTCCATGGGCGGCAGGGGCCGATTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: HVGLQPMISGAELQT*RAMELHGRQGPIHH Trigger: ATGATGAATCGGCCCCTGCCGCCCATGGAGCTCCATGGCTCTCCAGGTCTGAAGCTCAGCCCCACTTATCATTGGCTGGAGACCAACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS-3UTR CAA 90 bp | CTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCCAACATATGGGTGTGCGAGCCTaGCTGGGCCAACACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQSQKSRRWLSRPPWSQHMGVRA*LGQHCW Trigger: CCAGCAGTGTTGGCCCAGCAAGGCTCGCACACCCAT...ATGTTGGCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS-3UTR CAA 90 bp | TCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGGAGCCAACATGATGGGTGTGCGAGCCTaGCTGGGCCAACACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSHRRAEDGCPGHLGANMMGVRA*LGQHCW Trigger: CCAGCAGTGTTGGCCCAGCAAGGCTCGCACACCCAT...CATGTTGGCTCCAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS-3UTR CAA 90 bp | GACACAGAGAAAAGAGGTGCCGGCTGCATTCAGTGGAGAAAGGGGGAGCCAAGGAAGAAGAGGTGGGCCTaGGTCATGTGGGTCACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: DTEKRGAGCIQWRKGEPRKKRWA*VMWVTA Trigger: TGCGGTGACCCACATGACCAAGGCCCACCTCTTCTT...CCTTGGCTCCCCCTTTCTCCACTGAATGCAGCCGGCACCTCTTTTCTCTGTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| CDS-3UTR CAA 90 bp | AATTCCTTGGGGACTGCAGAATGTTCTGAAAGGCCCAATCCGCTGGGCTTCTATGCCTGGGATGGAGTCTaGGCCTCAGGCCCCATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NSLGTAECSERPNPLGFYAWDGV*ASGPMA Trigger: GGCCATGGGGCCTGAGGCCAAGACTCCATCCCAGGC...ATAGAAGCCCAGCGGATTGGGCCTTTCAGAACATTCTGCAGTCCCCAAGGAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022620.11 |
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| CDS-3UTR CAA 90 bp | CTAGAGATGGCTCCAGTCACAGAAGAGCAGAAGATGGTTGTCCAGGCCACCTTGAAGAAGAGGTGGGCCTaGGTCATGTGGGTCACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LEMAPVTEEQKMVVQATLKKRWA*VMWVTA Trigger: TGCGGTGACCCACATGACCAAGGCCCACCTCTTCTT...CAAGGTGGCCTGGACAACCATCTTCTGCTCTTCTGTGACTGGAGCCATCTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CCA 90 bp | CCATGGCCCTCAGATGCAGGCTGCCATGGCCATAGAGGACACCCATaGAAGAGTCTGGGAGGCCTGCACACATACATATGTTTTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: PWPSDAGCHGHRGHP*KSLGGLHTYICFHL Trigger: AAGATGAAAACATATGTATGTGTGCAGGCCTCCCAGACTCTTCCATGGGTGTCCTCTATGGCCATGGCAGCCTGCATCTGAGGGCCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CCA 90 bp | CAGATGCAGGCTGCCATGGCCATAGAGGACACCCATGGAAGAGTCTaGGAGGCCTGCACACATACATATGTTTTCATCTTCTTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QMQAAMAIEDTHGRV*EACTHTYVFIFFLL Trigger: GAGGAGGAAGAAGATGAAAACATATGTATGTGTGCAGGCCTCCCAGACTCTTCCATGGGTGTCCTCTATGGCCATGGCAGCCTGCATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CAA 72 bp | CGGGGCACCCGGCCTAGCAGGGCCACCCTCACCCAGTaGGGCATGTTGTGCGTGCTAGGGGAACGGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RGTRPSRATLTQ*GMLCVLGERWW Trigger: CCACCACCGTTCCCCTAGCACGCACAACATGCCCAACTGGGTGAGGGTGGCCCTGCTAGGCCGGGTGCCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CAA 90 bp | ATCAGCCACCGGGGCACCCGGCCTAGCAGGGCCACCCTCACCCAGTaGGGCATGTTGTGCGTGCTAGGGGAACGGTGGTGGACATTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ISHRGTRPSRATLTQ*GMLCVLGERWWTLS Trigger: GCTCAATGTCCACCACCGTTCCCCTAGCACGCACAACATGCCCAACTGGGTGAGGGTGGCCCTGCTAGGCCGGGTGCCCCGGTGGCTGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CCA 72 bp | CTCCAGCCAATGATAAGTGGGGCTGAGCTTCAGACCTaGAGAGCCATGGAGCTCCATGGGCGGCAGGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LQPMISGAELQT*RAMELHGRQGP Trigger: CGGCCCCTGCCGCCCATGGAGCTCCATGGCTCTCCAGGTCTGAAGCTCAGCCCCACTTATCATTGGCTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CAA 72 bp | CGGCCTAGCAGGGCCACCCTCACCCAGTTGGGCATGTaGTGCGTGCTAGGGGAACGGTGGTGGACATTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RPSRATLTQLGM*CVLGERWWTLS Trigger: GCTCAATGTCCACCACCGTTCCCCTAGCACGCACAACATGCCCAACTGGGTGAGGGTGGCCCTGCTAGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CCA 72 bp | AACAGGCGGTCCTCGGCATGGGTGTGCGAGCCTTGCTaGGCCAACACTGCTGGCATCAGAAGCAGACACCAG | + |
|
Preference number: 6 (lower is better) Translates to: NRRSSAWVCEPC*ANTAGIRSRHQ Trigger: CTGGTGTCTGCTTCTGATGCCAGCAGTGTTGGCCCAGCAAGGCTCGCACACCCATGCCGAGGACCGCCTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CCA 72 bp | CCTCCAAAGAGGTGTTTGAACAGGCGGTCCTCGGCATaGGTGTGCGAGCCTTGCTGGGCCAACACTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPKRCLNRRSSA*VCEPCWANTAG Trigger: GCCAGCAGTGTTGGCCCAGCAAGGCTCGCACACCCATGCCGAGGACCGCCTGTTCAAACACCTCTTTGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CAA 72 bp | GGTGACAGCAGGATCTCACTAGCCTGGGATGGAGTCTaGGCCTCAGGCCCCATGGCCCTCAGATGCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GDSRISLAWDGV*ASGPMALRCRL Trigger: CAGCCTGCATCTGAGGGCCATGGGGCCTGAGGCCAAGACTCCATCCCAGGCTAGTGAGATCCTGCTGTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS TCA 72 bp | GCCGTGCCCAGCGATTGTAGCCTCCAAAGAGGTGTTTaGACAGGCGGTCCTCGGCATGGGTGTGCGAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AVPSDCSLQRGV*TGGPRHGCASL Trigger: AAGGCTCGCACACCCATGCCGAGGACCGCCTGTTCAAACACCTCTTTGGAGGCTACAATCGCTGGGCACGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS GCA 72 bp | AAGAGGTGTTTGAACAGGCGGTCCTCGGCATGGGTGTaGGAGCCTTGCTGGGCCAACACTGCTGGCATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KRCLNRRSSAWV*EPCWANTAGIR Trigger: TCTGATGCCAGCAGTGTTGGCCCAGCAAGGCTCGCACACCCATGCCGAGGACCGCCTGTTCAAACACCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CCA 72 bp | AAAGCGCACGATGACCACATCGGAAGTGTTGGGCACTaGCCGTGCCCAGCGATTGTAGCCTCCAAAGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KAHDDHIGSVGH*PCPAIVASKEV Trigger: CACCTCTTTGGAGGCTACAATCGCTGGGCACGGCCAGTGCCCAACACTTCCGATGTGGTCATCGTGCGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CAA 90 bp | AAAGAGGTGTTTGAACAGGCGGTCCTCGGCATGGGTGTGCGAGCCTaGCTGGGCCAACACTGCTGGCATCAGAAGCAGACACCAGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: KEVFEQAVLGMGVRA*LGQHCWHQKQTPEI Trigger: TATCTCTGGTGTCTGCTTCTGATGCCAGCAGTGTTGGCCCAGCAAGGCTCGCACACCCATGCCGAGGACCGCCTGTTCAAACACCTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS TCA 72 bp | CATCCATGTTGGTCTCCAGCCAATGATAAGTGGGGCTaGGCTTCAGACCTGGAGAGCCATGGAGCTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: HPCWSPANDKWG*ASDLESHGAPW Trigger: CCATGGAGCTCCATGGCTCTCCAGGTCTGAAGCTCAGCCCCACTTATCATTGGCTGGAGACCAACATGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS GCA 72 bp | CACGATGACCACATCGGAAGTGTTGGGCACTGGCCGTaGCCAGCGATTGTAGCCTCCAAAGAGGTGTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: HDDHIGSVGHWP*PAIVASKEVFE Trigger: TTCAAACACCTCTTTGGAGGCTACAATCGCTGGGCACGGCCAGTGCCCAACACTTCCGATGTGGTCATCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CCA 72 bp | GGCATGGGTGTGCGAGCCTTGCTGGGCCAACACTGCTaGCATCAGAAGCAGACACCAGAGATAAAGATGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GMGVRALLGQHC*HQKQTPEIKMY Trigger: ATACATCTTTATCTCTGGTGTCTGCTTCTGATGCCAGCAGTGTTGGCCCAGCAAGGCTCGCACACCCATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CCA 72 bp | TCAGATGCAGGCTGCCATGGCCATAGAGGACACCCATaGAAGAGTCTGGGAGGCCTGCACACATACATATGT | + |
|
Preference number: 6 (lower is better) Translates to: SDAGCHGHRGHP*KSLGGLHTYIC Trigger: ACATATGTATGTGTGCAGGCCTCCCAGACTCTTCCATGGGTGTCCTCTATGGCCATGGCAGCCTGCATCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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| CDS CCA 72 bp | GCTGCCATGGCCATAGAGGACACCCATGGAAGAGTCTaGGAGGCCTGCACACATACATATGTTTTCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AAMAIEDTHGRV*EACTHTYVFIF Trigger: GAAGATGAAAACATATGTATGTGTGCAGGCCTCCCAGACTCTTCCATGGGTGTCCTCTATGGCCATGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022620.11 ENSMUST00000206455.2 |
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