Pregenerated sensors for CHRNA10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066279Ensembl transcript IDs: ENSMUST00000084830.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGAGTCAAATGTCTGCACAGCCTTCTGTTTTGGAAACTAGACAGTaGGTTCCCTCCCGGGAGAGCCTAGCAGTGAGAAGCAAGATGAGA | + |
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Preference number: 1 (lower is better) Translates to: PSQMSAQPSVLETRQ*VPSRESLAVRSKMR Trigger: TCTCATCTTGCTTCTCACTGCTAGGCTCTCCCGGGAGGGAACTCACTGTCTAGTTTCCAAAACAGAAGGCTGTGCAGACATTTGACTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR CCA 90 bp | CCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGAGAAACTaGCTAGTGTTTCTGAGTACCAACAACCACCTGGGCTTTGCCATC | + |
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Preference number: 1 (lower is better) Translates to: PEEVSLTLSSTLGRN*LVFLSTNNHLGFAI Trigger: GATGGCAAAGCCCAGGTGGTTGTTGGTACTCAGAAACACTAGCCAGTTTCTCCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR CCA 90 bp | CAAGGACTACATAGCGAGACTCTAACTCGACAAAGGAAAATAACCTaGATTCCACCGGCTAATAGCTATGATTCCAAGTGTAGACACTGG | + |
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Preference number: 1 (lower is better) Translates to: QGLHSETLTRQRKIT*IPPANSYDSKCRHW Trigger: CCAGTGTCTACACTTGGAATCATAGCTATTAGCCGGTGGAATCCAGGTTATTTTCCTTTGTCGAGTTAGAGTCTCGCTATGTAGTCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR CCA 90 bp | ACCTGGATTCCACCGGCTAATAGCTATGATTCCAAGTGTAGACACTaGGGTGGTTATTTATTTTTAGACAAAAATTTCTGTAGCTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: TWIPPANSYDSKCRH*GGYLFLDKNFCSSG Trigger: GCCTGAGCTACAGAAATTTTTGTCTAAAAATAAATAACCACCCCAGTGTCTACACTTGGAATCATAGCTATTAGCCGGTGGAATCCAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAGAAGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGGTACCAACAACCACCTaGGCTTTGCCATCCCCACCT | + |
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Preference number: 2 (lower is better) Translates to: VRSAGPEEVSLTLSSTLGVPTTT*ALPSPP Trigger: AGGTGGGGATGGCAAAGCCCAGGTGGTTGTTGGTAC...CCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACTTCTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGCAAGGACTACATAGCGAGACTCTAACTCGACAAAGGAAAATAACCTGGCTGAAGAGGTGTCTCTaGCTCTTAGCAGCACTTTGG | + |
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Preference number: 2 (lower is better) Translates to: GQQGLHSETLTRQRKITWLKRCL*LLAALW Trigger: CCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAG...CCAGGTTATTTTCCTTTGTCGAGTTAGAGTCTCGCTATGTAGTCCTTGCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR-3UTR TCA 90 bp | TGGATCGAAGCTCCGAGTCAAATGTCTGCACAGCCTTCTGTTTTGGAAACTAGACAGAAGTGCTGGTCCTaGAGAGGTGTCTCTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: WIEAPSQMSAQPSVLETRQKCWS*RGVSDS Trigger: AGAGTCAGAGACACCTCTTCAGGACCAGCACTTCTG...TCTAGTTTCCAAAACAGAAGGCTGTGCAGACATTTGACTCGGAGCTTCGATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAATAGCTATGATTCCAAGTGTAGACACTGGGGTGGTTATTTATTTTTAGACCCCACCTGGTGGTGTTaGGGTGATCACAGCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: ANSYDSKCRHWGGYLFLDPTWWC*GDHSSL Trigger: CAGGGAGCTGTGATCACCTCAACACCACCAGGTGGG...GTCTAAAAATAAATAACCACCCCAGTGTCTACACTTGGAATCATAGCTATTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR-3UTR CCA 90 bp | TGGATCGAAGCTCCGAGTCAAATGTCTGCACAGCCTTCTGTTTTGGAAACTAGATCAGCCTCCTTGTGCTaGAATTATATCACCTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: WIEAPSQMSAQPSVLETRSASLC*NYITLL Trigger: GAGCAAGGTGATATAATTCCAGCACAAGGAGGCTGA...TCTAGTTTCCAAAACAGAAGGCTGTGCAGACATTTGACTCGGAGCTTCGATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGAGTTCAAAGCCAACCTGGGCTACATAGCAAGTTCCAGGCCAGCAAGGACTACAACCACCTGGGCTTaGCCATCCCCACCTGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: CEFKANLGYIASSRPARTTTTWA*PSPPGG Trigger: ACCACCAGGTGGGGATGGCAAAGCCCAGGTGGTTGT...AGTCCTTGCTGGCCTGGAACTTGCTATGTAGCCCAGGTTGGCTTTGAACTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR TCA 72 bp | ATGTCTGCACAGCCTTCTGTTTTGGAAACTAGACAGTaGGTTCCCTCCCGGGAGAGCCTAGCAGTGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: MSAQPSVLETRQ*VPSRESLAVRS Trigger: GCTTCTCACTGCTAGGCTCTCCCGGGAGGGAACTCACTGTCTAGTTTCCAAAACAGAAGGCTGTGCAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR CCA 72 bp | AAGCTCCGAGTCAAATGTCTGCACAGCCTTCTGTTTTaGAAACTAGACAGTGAGTTCCCTCCCGGGAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: KLRVKCLHSLLF*KLDSEFPPGRA Trigger: GGCTCTCCCGGGAGGGAACTCACTGTCTAGTTTCCAAAACAGAAGGCTGTGCAGACATTTGACTCGGAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR CCA 72 bp | GTGTCTCTGACTCTTAGCAGCACTTTGGGGAGAAACTaGCTAGTGTTTCTGAGTACCAACAACCACCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: VSLTLSSTLGRN*LVFLSTNNHLG Trigger: GCCCAGGTGGTTGTTGGTACTCAGAAACACTAGCCAGTTTCTCCCCAAAGTGCTGCTAAGAGTCAGAGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR GCA 72 bp | GGAGAGGCAAGCTTTAGATCCCCTTCCATTAGGGCATaGAGATCACAAAGGCTGTTTGTGGGTTTGAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: GEASFRSPSIRA*RSQRLFVGLRS Trigger: TGACCTCAAACCCACAAACAGCCTTTGTGATCTGCATGCCCTAATGGAAGGGGATCTAAAGCTTGCCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTTGGAATTAGGGGAGAGGCAAGCTTTAGATCCCCTTCCATTAGGGCATGCAACTCTTAGCAGCACTTaGGGGAGAAACTGGCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: MLELGERQALDPLPLGHATLSST*GRNWLV Trigger: CACTAGCCAGTTTCTCCCCAAAGTGCTGCTAAGAGT...TGCATGCCCTAATGGAAGGGGATCTAAAGCTTGCCTCTCCCCTAATTCCAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGAGTTCAAAGCCAACCTGGGCTACATAGCAAGTTCCAGGCCAGCAAGGACTCTCCAAGTCTGTACTTaGACCTCACTCATGTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: CEFKANLGYIASSRPARTLQVCT*TSLMLE Trigger: TTCCAACATGAGTGAGGTCAAAGTACAGACTTGGAG...AGTCCTTGCTGGCCTGGAACTTGCTATGTAGCCCAGGTTGGCTTTGAACTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR-3UTR CAA 90 bp | GCTAATAGCTATGATTCCAAGTGTAGACACTGGGGTGGTTATTTATTTTTAGACAGGCTGTTTGTGGGTTaGAGGTCAGAAGTGCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: ANSYDSKCRHWGGYLFLDRLFVG*RSEVLV Trigger: GACCAGCACTTCTGACCTCAAACCCACAAACAGCCT...GTCTAAAAATAAATAACCACCCCAGTGTCTACACTTGGAATCATAGCTATTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR CCA 72 bp | CATAGCGAGACTCTAACTCGACAAAGGAAAATAACCTaGATTCCACCGGCTAATAGCTATGATTCCAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: HSETLTRQRKIT*IPPANSYDSKC Trigger: ACACTTGGAATCATAGCTATTAGCCGGTGGAATCCAGGTTATTTTCCTTTGTCGAGTTAGAGTCTCGCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR GCA 90 bp | ACCACCTGGGCTTTGCCATCCCCACCTGGTGGTGTTGAGGTGATCACAGCTCCCAGCTGGTGCCCGCCGTaGGTCCATGAGCCGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: TTWALPSPPGGVEVITAPSWCPP*VHEPKV Trigger: GACCTTCGGCTCATGGACGCACGGCGGGCACCAGCT...GGGAGCTGTGATCACCTCAACACCACCAGGTGGGGATGGCAAAGCCCAGGTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | CAACCTGGGCTACATAGCAAGTTCCAGGCCAGCAAGGACTACATAGCGAGACTCTCTTCATGGCGGCGCTaGGCAGCCCGGTGGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: QPGLHSKFQASKDYIARLSSWRR*AARWLR Trigger: CCGCAGCCACCGGGCTGCCCAGCGCCGCCATGAAGA...GAGTCTCGCTATGTAGTCCTTGCTGGCCTGGAACTTGCTATGTAGCCCAGGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR TCA 90 bp | AGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGAGAAACGGCACGAGCTGCGTGTaGTGGCCGGTGCGTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SAGPEEVSLTLSSTLGRNGTSCV*WPVRPS Trigger: GCTGGGACGCACCGGCCATCACACGCAGCTCGTGCC...GTTTCTCCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR TCA 90 bp | GTCAGAAGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGGCGCCAGGAGCACGGTaGCGCCCAGAGACACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VRSAGPEEVSLTLSSTLGAPGAR*RPETPS Trigger: AGAAGGTGTCTCTGGGCGTCACCGTGCTCCTGGCGC...CCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACTTCTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | GTCAGAAGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGGGTCGCACATCCAGCTaGTGCCCGCCGTGCGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: VRSAGPEEVSLTLSSTLGGRTSS*CPPCVH Trigger: ATGGACGCACGGCGGGCACCAGCTGGATGTGCGACC...CCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACTTCTGAC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | GTCAGAAGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGGGACCTGCAGGAGGCTaGAGGCTGGGGGCTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: VRSAGPEEVSLTLSSTLGGPAGG*RLGADS Trigger: AGAGTCAGCCCCCAGCCTCCAGCCTCCTGCAGGTCC...CCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACTTCTGAC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | CTCCAAGTCTGTACTTTGACCTCACTCATGTTGGAATTAGGGGAGAGGCAAGCTCGCTGGGCAGCCCGGTaGCTGCGGAAGGTGCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: LQVCTLTSLMLELGERQARWAAR*LRKVPA Trigger: TGCCGGCACCTTCCGCAGCCACCGGGCTGCCCAGCG...AGCTTGCCTCTCCCCTAATTCCAACATGAGTGAGGTCAAAGTACAGACTTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGAGAAACTGGCTAGTGTTTAGCAGCAGCCGTAGGTaGGCACGCGCCTGCGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: EEVSLTLSSTLGRNWLVFSSSRR*ARACAL Trigger: CAGCGCGCAGGCGCGTGCTCACCTACGGCTGCTGCT...AAACACTAGCCAGTTTCTCCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR GCA 90 bp | AGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGAGAAACCGCACATCCAGCTGGTaGCCGCCGTGCGTCCATGAG | + |
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Preference number: 4 (lower is better) Translates to: SAGPEEVSLTLSSTLGRNRTSSW*PPCVHE Trigger: CTCATGGACGCACGGCGGGCACCAGCTGGATGTGCG...GTTTCTCCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | GTGGATCTGTGTGAGTTCAAAGCCAACCTGGGCTACATAGCAAGTTCCAGGCCAGCTGGCCGAGGCAGGTaGCTGCGTGTCCGCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: VDLCEFKANLGYIASSRPAGRGR*LRVRLV Trigger: AACAAGGCGGACACGCAGCCACCTGCCTCGGCCAGC...TGGCCTGGAACTTGCTATGTAGCCCAGGTTGGCTTTGAACTCACACAGATCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGAGACAACCACGTTGGTGCTaGCCGAGGCAGGTGGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: RSAGPEEVSLTLSSTLGRQPRWC*PRQVAA Trigger: CGCAGCCACCTGCCTCGGCCAGCACCAACGTGGTTG...TCTCCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | GGCCAGCAAGGACTACATAGCGAGACTCTAACTCGACAAAGGAAAATAACCTGGCACGCGCCTGCGCGCTaGCATGCCCAGCACACGCCA | + |
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Preference number: 4 (lower is better) Translates to: GQQGLHSETLTRQRKITWHAPAR*HAQHTP Trigger: TGGCGTGTGCTGGGCATGCCAGCGCGCAGGCGCGTG...CCAGGTTATTTTCCTTTGTCGAGTTAGAGTCTCGCTATGTAGTCCTTGCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR GCA 90 bp | TGTACTTTGACCTCACTCATGTTGGAATTAGGGGAGAGGCAAGCTTTAGATCCCGCGTGTGATGGCCGGTaGGTCCCAGCGCACAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: CTLTSLMLELGERQALDPACDGR*VPAHSA Trigger: GGCGCTGTGCGCTGGGACGCACCGGCCATCACACGC...GGGATCTAAAGCTTGCCTCTCCCCTAATTCCAACATGAGTGAGGTCAAAGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR GCA 90 bp | GTCAGAAGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGGAGTGGAACGCTCTCTaGAGGTGGCATGCTCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: VRSAGPEEVSLTLSSTLGEWNAL*RWHALG Trigger: GCCGAGAGCATGCCACCTGCAGAGAGCGTTCCACTC...CCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACTTCTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | ACCTGGATTCCACCGGCTAATAGCTATGATTCCAAGTGTAGACACTGGGGTGGTCGCTTCCAATCTTCATaGCGGCGCTGGGCAGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: TWIPPANSYDSKCRHWGGRFQSS*RRWAAR Trigger: CCGGGCTGCCCAGCGCCGCCATGAAGATTGGAAGCG...ACCACCCCAGTGTCTACACTTGGAATCATAGCTATTAGCCGGTGGAATCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR TCA 90 bp | ACTCATGTTGGAATTAGGGGAGAGGCAAGCTTTAGATCCCCTTCCATTAGGGCAAGACACCGTGGCTCATaGCAAGGGCCCGCTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: THVGIRGEASFRSPSIRARHRGS*QGPAGG Trigger: TCCCCCAGCGGGCCCTTGTCATGAGCCACGGTGTCT...TGCCCTAATGGAAGGGGATCTAAAGCTTGCCTCTCCCCTAATTCCAACATGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR GCA 90 bp | GGCCAGCAAGGACTACATAGCGAGACTCTAACTCGACAAAGGAAAATAACCTGGCGCACAGCGCCGTCGTaGCGCACAACCACGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GQQGLHSETLTRQRKITWRTAPS*RTTTLV Trigger: CACCAACGTGGTTGTGCGGCACGACGGCGCTGTGCG...CCAGGTTATTTTCCTTTGTCGAGTTAGAGTCTCGCTATGTAGTCCTTGCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGAGAGGTGGCTGCGGAAGGTaGCGGCAATGGAAGCTACGT | + |
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Preference number: 4 (lower is better) Translates to: RSAGPEEVSLTLSSTLGRGGCGR*RQWKLR Trigger: ACGTAGCTTCCATTGCCGGCACCTTCCGCAGCCACC...TCTCCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | AGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGAGAAACCAGGAGGCTGGAGGCTaGGGGCTGACTCTAATGGCT | + |
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Preference number: 4 (lower is better) Translates to: SAGPEEVSLTLSSTLGRNQEAGG*GLTLMA Trigger: AGCCATTAGAGTCAGCCCCCAGCCTCCAGCCTCCTG...GTTTCTCCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR TCA 90 bp | TTTGGGGAGAAACTGGCTAGTGTTTCTGAGTACCAACAACCACCTGGGCTTTGCGTCAGGCCACAGCGCTaGGCGTCAAATGGGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: FGEKLASVSEYQQPPGLCVRPQR*ASNGKA Trigger: TGCCTTCCCATTTGACGCTCAGCGCTGTGGCCTGAC...GCAAAGCCCAGGTGGTTGTTGGTACTCAGAAACACTAGCCAGTTTCTCCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGAGAAACTGGCTAGTGTTTGGCGCAGCAGCAGAGTaGAGGTCACGTCTGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: EEVSLTLSSTLGRNWLVFGAAAE*RSRLGR Trigger: CCTACCCAGACGTGACCTTCACTCTGCTGCTGCGCC...AAACACTAGCCAGTTTCTCCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGAGAGTGGAAGGCCAGAGGTaGCAGCAGGGAGATGAACAC | + |
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Preference number: 4 (lower is better) Translates to: RSAGPEEVSLTLSSTLGRVEGQR*QQGDEH Trigger: GTGTTCATCTCCCTGCTGGCACCTCTGGCCTTCCAC...TCTCCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | ATGTTGGAATTAGGGGAGAGGCAAGCTTTAGATCCCCTTCCATTAGGGCATGCATCGGCCAGGATCAGCTaGAAGACGGTGAGCGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MLELGERQALDPLPLGHASARIS*KTVSAR Trigger: CCTGGCGCTCACCGTCTTCCAGCTGATCCTGGCCGA...TGCATGCCCTAATGGAAGGGGATCTAAAGCTTGCCTCTCCCCTAATTCCAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | CAACCTGGGCTACATAGCAAGTTCCAGGCCAGCAAGGACTACATAGCGAGACTCCTGACTCTAATGGCTTaGACTGTCCACAGGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: QPGLHSKFQASKDYIARLLTLMA*TVHRAP Trigger: GGGAGCCCTGTGGACAGTCCAAGCCATTAGAGTCAG...GAGTCTCGCTATGTAGTCCTTGCTGGCCTGGAACTTGCTATGTAGCCCAGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR GCA 90 bp | GTTTGGAGAGGCAGAGGCATGTGGATCTGTGTGAGTTCAAAGCCAACCTGGGCTAGTCTGGTCTGTGTCTaGCACTGGTCTCAAGGCACT | + |
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Preference number: 4 (lower is better) Translates to: VWRGRGMWICVSSKPTWASLVCV*HWSQGT Trigger: AGTGCCTTGAGACCAGTGGCAGACACAGACCAGACT...AGCCCAGGTTGGCTTTGAACTCACACAGATCCACATGCCTCTGCCTCTCCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGAGATGCAGAAGGGCTTCTTaGTGGCATAGACACCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: RSAGPEEVSLTLSSTLGRCRRAS*WHRHRG Trigger: GCCACGGTGTCTATGCCACCAAGAAGCCCTTCTGCA...TCTCCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | ATGTTGGAATTAGGGGAGAGGCAAGCTTTAGATCCCCTTCCATTAGGGCATGCAAACGCTCTCTGCAGGTaGCATGCTCTCGGCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: MLELGERQALDPLPLGHANALCR*HALGQD Trigger: ATCCTGGCCGAGAGCATGCCACCTGCAGAGAGCGTT...TGCATGCCCTAATGGAAGGGGATCTAAAGCTTGCCTCTCCCCTAATTCCAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR GCA 90 bp | TGTACTTTGACCTCACTCATGTTGGAATTAGGGGAGAGGCAAGCTTTAGATCCCGCGTCTGTCCACTCCTaGCGGATCCACAGGTACAAG | + |
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Preference number: 4 (lower is better) Translates to: CTLTSLMLELGERQALDPASVHS*RIHRYK Trigger: CTTGTACCTGTGGATCCGGCAGGAGTGGACAGACGC...GGGATCTAAAGCTTGCCTCTCCCCTAATTCCAACATGAGTGAGGTCAAAGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | CTCCAAGTCTGTACTTTGACCTCACTCATGTTGGAATTAGGGGAGAGGCAAGCTGCGCTGAGCGTCAAATaGGAAGGCAGAGACATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQVCTLTSLMLELGERQAALSVK*EGRDIH Trigger: GTGGATGTCTCTGCCTTCCCATTTGACGCTCAGCGC...AGCTTGCCTCTCCCCTAATTCCAACATGAGTGAGGTCAAAGTACAGACTTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | TGGATCGAAGCTCCGAGTCAAATGTCTGCACAGCCTTCTGTTTTGGAAACTAGAAGTGAAGGTCACGTCTaGGTAGGGCTCGGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WIEAPSQMSAQPSVLETRSEGHV*VGLGAA Trigger: TGCTGCTCCGAGCCCTACCCAGACGTGACCTTCACT...TCTAGTTTCCAAAACAGAAGGCTGTGCAGACATTTGACTCGGAGCTTCGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | CTCCAAGTCTGTACTTTGACCTCACTCATGTTGGAATTAGGGGAGAGGCAAGCTAGCCCAGGCAGGTACTaGATGTGCATTAGGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LQVCTLTSLMLELGERQASPGRY*MCIRAT Trigger: TGTGGCCCTAATGCACATCCAGTACCTGCCTGGGCT...AGCTTGCCTCTCCCCTAATTCCAACATGAGTGAGGTCAAAGTACAGACTTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | TGTACTTTGACCTCACTCATGTTGGAATTAGGGGAGAGGCAAGCTTTAGATCCCGCACACACAGGCCTTTaGCTAGGTGTCCCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CTLTSLMLELGERQALDPAHTGL*LGVPAG Trigger: TCCTGCTGGGACACCTAGCCAAAGGCCTGTGTGTGC...GGGATCTAAAGCTTGCCTCTCCCCTAATTCCAACATGAGTGAGGTCAAAGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR TCA 90 bp | GGCCAGCAAGGACTACATAGCGAGACTCTAACTCGACAAAGGAAAATAACCTGGTCCATATCAATGATCTaGGACAACGTCACCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQQGLHSETLTRQRKITWSISMI*DNVTSR Trigger: CCTGGAGGTGACGTTGTCTCAGATCATTGATATGGA...CCAGGTTATTTTCCTTTGTCGAGTTAGAGTCTCGCTATGTAGTCCTTGCTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR TCA 90 bp | GTGGATCTGTGTGAGTTCAAAGCCAACCTGGGCTACATAGCAAGTTCCAGGCCAGTTCATCCATATCAATaGTCTGAGACAACGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VDLCEFKANLGYIASSRPVHPYQ*SETTSP Trigger: AGGTGACGTTGTCTCAGATCATTGATATGGATGAAC...TGGCCTGGAACTTGCTATGTAGCCCAGGTTGGCTTTGAACTCACACAGATCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR GCA 90 bp | CTCCAAGTCTGTACTTTGACCTCACTCATGTTGGAATTAGGGGAGAGGCAAGCTCCATGCAGAAGAAGATaGCTAGGAAAAAGCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQVCTLTSLMLELGERQAPCRRR*LGKSGP Trigger: TGGACCGCTTTTTCCTAGGCATCTTCTTCTGCATGG...AGCTTGCCTCTCCCCTAATTCCAACATGAGTGAGGTCAAAGTACAGACTTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | ATGTTGGAATTAGGGGAGAGGCAAGCTTTAGATCCCCTTCCATTAGGGCATGCAGTCACATTTAGAGTCTaGTCTGTGTCTGCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MLELGERQALDPLPLGHAVTFRV*SVSATG Trigger: ACCAGTGGCAGACACAGACCAGACTCTAAATGTGAC...TGCATGCCCTAATGGAAGGGGATCTAAAGCTTGCCTCTCCCCTAATTCCAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | TGTACTTTGACCTCACTCATGTTGGAATTAGGGGAGAGGCAAGCTTTAGATCCCGTCTGTGTCTGCCACTaGTCTCAAGGCACTTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: CTLTSLMLELGERQALDPVCVCH*SQGTCI Trigger: TATACAAGTGCCTTGAGACCAGTGGCAGACACAGAC...GGGATCTAAAGCTTGCCTCTCCCCTAATTCCAACATGAGTGAGGTCAAAGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | TGTACTTTGACCTCACTCATGTTGGAATTAGGGGAGAGGCAAGCTTTAGATCCCGCCACACTAGACTGCTaGGAATTCGAATTGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CTLTSLMLELGERQALDPATLDC*EFELHP Trigger: TGGATGCAATTCGAATTCCCAGCAGTCTAGTGTGGC...GGGATCTAAAGCTTGCCTCTCCCCTAATTCCAACATGAGTGAGGTCAAAGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| 3UTR CAA 72 bp | CTTAGCCTCCAAGTCTGTACTTTGACCTCACTCATGTaGGAATTAGGGGAGAGGCAAGCTTTAGATCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLQVCTLTSLM*ELGERQALDPL Trigger: AAGGGGATCTAAAGCTTGCCTCTCCCCTAATTCCAACATGAGTGAGGTCAAAGTACAGACTTGGAGGCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR TCA 90 bp | GCTAATAGCTATGATTCCAAGTGTAGACACTGGGGTGGTTATTTATTTTTAGACGTGCCAGCAGGGAGATaGACACACAGGGCAGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ANSYDSKCRHWGGYLFLDVPAGR*THRAAV Trigger: TACTGCTGCCCTGTGTGTTCATCTCCCTGCTGGCAC...GTCTAAAAATAAATAACCACCCCAGTGTCTACACTTGGAATCATAGCTATTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGAGAAACTGGCTAGTGTTTTACAAGGTCAGCACTTaGTTCCGTTCATCCATATCA | + |
|
Preference number: 4 (lower is better) Translates to: EEVSLTLSSTLGRNWLVFYKVST*FRSSIS Trigger: TGATATGGATGAACGGAACCAAGTGCTGACCTTGTA...AAACACTAGCCAGTTTCTCCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CCA 90 bp | GCTAATAGCTATGATTCCAAGTGTAGACACTGGGGTGGTTATTTATTTTTAGACAGCGGTCCATTACTCTaGCCAGGCGCTTCCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ANSYDSKCRHWGGYLFLDSGPLL*PGASNL Trigger: AAGATTGGAAGCGCCTGGCCAGAGTAATGGACCGCT...GTCTAAAAATAAATAACCACCCCAGTGTCTACACTTGGAATCATAGCTATTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 90 bp | AAGTCGGCCAGACTGGCGGAAGTGCCCCGAGGTCGCACATCCAGCTaGTGCCCGCCGTGCGTCCATGAGCCGAAGGTCAGGCCACAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KSARLAEVPRGRTSS*CPPCVHEPKVRPQR Trigger: GCGCTGTGGCCTGACCTTCGGCTCATGGACGCACGGCGGGCACCAGCTGGATGTGCGACCTCGGGGCACTTCCGCCAGTCTGGCCGACTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 90 bp | CCGGTGCGTCCCAGCGCACAGCGCCGTCGTGCCGCACAACCACGTTaGTGCTGGCCGAGGCAGGTGGCTGCGTGTCCGCCTTGTTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: PVRPSAQRRRAAQPR*CWPRQVAACPPCCK Trigger: TTTACAACAAGGCGGACACGCAGCCACCTGCCTCGGCCAGCACCAACGTGGTTGTGCGGCACGACGGCGCTGTGCGCTGGGACGCACCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS TCA 90 bp | AGTGCCCCGAGGTCGCACATCCAGCTGGTGCCCGCCGTGCGTCCATaGGCCGAAGGTCAGGCCACAGCGCTGAGCGTCAAATGGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SAPRSHIQLVPAVRP*AEGQATALSVKWEG Trigger: GCCTTCCCATTTGACGCTCAGCGCTGTGGCCTGACCTTCGGCTCATGGACGCACGGCGGGCACCAGCTGGATGTGCGACCTCGGGGCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS GCA 90 bp | GAAGGCAGAGACATCCACACGGCACGAGCTGCGTGTGATGGCCGGTaGGTCCCAGCGCACAGCGCCGTCGTGCCGCACAACCACGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EGRDIHTARAACDGR*VPAHSAVVPHNHVG Trigger: ACCAACGTGGTTGTGCGGCACGACGGCGCTGTGCGCTGGGACGCACCGGCCATCACACGCAGCTCGTGCCGTGTGGATGTCTCTGCCTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 90 bp | GTAGGGCTCGGAGCAGCAGCCGTAGGTGAGCACGCGCCTGCGCGCTaGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VGLGAAAVGEHAPAR*HAQHTPFNVLHEVG Trigger: GCCGACTTCGTGGAGAACGTTGAATGGCGTGTGCTGGGCATGCCAGCGCGCAGGCGCGTGCTCACCTACGGCTGCTGCTCCGAGCCCTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS TCA 90 bp | CGTCAAATGGGAAGGCAGAGACATCCACACGGCACGAGCTGCGTGTaGTGGCCGGTGCGTCCCAGCGCACAGCGCCGTCGTGCCGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: RQMGRQRHPHGTSCV*WPVRPSAQRRRAAQ Trigger: TTGTGCGGCACGACGGCGCTGTGCGCTGGGACGCACCGGCCATCACACGCAGCTCGTGCCGTGTGGATGTCTCTGCCTTCCCATTTGACG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS GCA 90 bp | GTGCGTCCCAGCGCACAGCGCCGTCGTGCCGCACAACCACGTTGGTaGTGGCCGAGGCAGGTGGCTGCGTGTCCGCCTTGTTGTAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VRPSAQRRRAAQPRW*WPRQVAACPPCCKV Trigger: TACTTTACAACAAGGCGGACACGCAGCCACCTGCCTCGGCCAGCACCAACGTGGTTGTGCGGCACGACGGCGCTGTGCGCTGGGACGCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS GCA 90 bp | CACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAGTaGCCCGAGGTCGCACATCCAGCTGGTGCCCGCCGTGCGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: HAIQRSPRSRPDWRK*PEVAHPAGARRASM Trigger: CATGGACGCACGGCGGGCACCAGCTGGATGTGCGACCTCGGGGCACTTCCGCCAGTCTGGCCGACTTCGTGGAGAACGTTGAATGGCGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 90 bp | CGTCCCAGCGCACAGCGCCGTCGTGCCGCACAACCACGTTGGTGCTaGCCGAGGCAGGTGGCTGCGTGTCCGCCTTGTTGTAAAGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: RPSAQRRRAAQPRWC*PRQVAACPPCCKVR Trigger: TCGTACTTTACAACAAGGCGGACACGCAGCCACCTGCCTCGGCCAGCACCAACGTGGTTGTGCGGCACGACGGCGCTGTGCGCTGGGACG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 90 bp | TGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTaGCGGAAGTGCCCCGAGGTCGCACATCCAGCTGGTGCCCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: CPAHAIQRSPRSRPD*RKCPEVAHPAGARR Trigger: ACGGCGGGCACCAGCTGGATGTGCGACCTCGGGGCACTTCCGCCAGTCTGGCCGACTTCGTGGAGAACGTTGAATGGCGTGTGCTGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 90 bp | CGGTCCATTACTCTGGCCAGGCGCTTCCAATCTTCATGGCGGCGCTaGGCAGCCCGGTGGCTGCGGAAGGTGCCGGCAATGGAAGCTACG | + |
|
Preference number: 5 (lower is better) Translates to: RSITLARRFQSSWRR*AARWLRKVPAMEAT Trigger: CGTAGCTTCCATTGCCGGCACCTTCCGCAGCCACCGGGCTGCCCAGCGCCGCCATGAAGATTGGAAGCGCCTGGCCAGAGTAATGGACCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS TCA 90 bp | TGGTGCCCGCCGTGCGTCCATGAGCCGAAGGTCAGGCCACAGCGCTaGGCGTCAAATGGGAAGGCAGAGACATCCACACGGCACGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WCPPCVHEPKVRPQR*ASNGKAETSTRHEL Trigger: CAGCTCGTGCCGTGTGGATGTCTCTGCCTTCCCATTTGACGCTCAGCGCTGTGGCCTGACCTTCGGCTCATGGACGCACGGCGGGCACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS GCA 90 bp | CCAGGCGCTTCCAATCTTCATGGCGGCGCTGGGCAGCCCGGTGGCTaGGGAAGGTGCCGGCAATGGAAGCTACGTGATGCAGAAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGASNLHGGAGQPGG*GRCRQWKLRDAEGL Trigger: AAGCCCTTCTGCATCACGTAGCTTCCATTGCCGGCACCTTCCGCAGCCACCGGGCTGCCCAGCGCCGCCATGAAGATTGGAAGCGCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS GCA 90 bp | TCCAATCTTCATGGCGGCGCTGGGCAGCCCGGTGGCTGCGGAAGGTaGCGGCAATGGAAGCTACGTGATGCAGAAGGGCTTCTTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SNLHGGAGQPGGCGR*RQWKLRDAEGLLGG Trigger: GCCACCAAGAAGCCCTTCTGCATCACGTAGCTTCCATTGCCGGCACCTTCCGCAGCCACCGGGCTGCCCAGCGCCGCCATGAAGATTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 90 bp | AGGAAAAAGCGGTCCATTACTCTGGCCAGGCGCTTCCAATCTTCATaGCGGCGCTGGGCAGCCCGGTGGCTGCGGAAGGTGCCGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: RKKRSITLARRFQSS*RRWAARWLRKVPAM Trigger: CATTGCCGGCACCTTCCGCAGCCACCGGGCTGCCCAGCGCCGCCATGAAGATTGGAAGCGCCTGGCCAGAGTAATGGACCGCTTTTTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CAA 90 bp | ACCACCTGGGCTTTGCCATCCCCACCTGGTGGTGTTGAGGTGATCACAGCTCCCTGCCGCACAACCACGTaGGTGCTGGCCGAGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TTWALPSPPGGVEVITAPCRTTT*VLAEAG Trigger: ACCTGCCTCGGCCAGCACCAACGTGGTTGTGCGGCA...GGGAGCTGTGATCACCTCAACACCACCAGGTGGGGATGGCAAAGCCCAGGTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS TCA 90 bp | CGGAGTCAGCGGGCAGGTGGAAGGCCAGAGGTGCCAGCAGGGAGATaGACACACAGGGCAGCAGTAGGTTGCACACATAGGCAGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSQRAGGRPEVPAGR*THRAAVGCTHRQLH Trigger: GTGCAGCTGCCTATGTGTGCAACCTACTGCTGCCCTGTGTGTTCATCTCCCTGCTGGCACCTCTGGCCTTCCACCTGCCCGCTGACTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 90 bp | GAGCCATGCAGAAGAAGATGCCTAGGAAAAAGCGGTCCATTACTCTaGCCAGGCGCTTCCAATCTTCATGGCGGCGCTGGGCAGCCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: EPCRRRCLGKSGPLL*PGASNLHGGAGQPG Trigger: ACCGGGCTGCCCAGCGCCGCCATGAAGATTGGAAGCGCCTGGCCAGAGTAATGGACCGCTTTTTCCTAGGCATCTTCTTCTGCATGGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGAGACGCACACACAGGCCTTaGGCTAGGTGTCCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSAGPEEVSLTLSSTLGRRTHRP*ARCPSR Trigger: CCTGCTGGGACACCTAGCCAAAGGCCTGTGTGTGCG...TCTCCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 90 bp | CTAGACTGCTGGGAATTCGAATTGCATCCAAGTCACCGTAGGCTTTaGGGTCCCAATGTAGGTAGGCGTCTGTCCACTCCTGCCGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: LDCWEFELHPSHRRL*GPNVGRRLSTPAGS Trigger: GGATCCGGCAGGAGTGGACAGACGCCTACCTACATTGGGACCCCAAAGCCTACGGTGACTTGGATGCAATTCGAATTCCCAGCAGTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CAA 90 bp | ACCACCTGGGCTTTGCCATCCCCACCTGGTGGTGTTGAGGTGATCACAGCTCCCGTACAAGGTCAGCACTaGGTTCCGTTCATCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: TTWALPSPPGGVEVITAPVQGQH*VPFIHI Trigger: GATATGGATGAACGGAACCAAGTGCTGACCTTGTAC...GGGAGCTGTGATCACCTCAACACCACCAGGTGGGGATGGCAAAGCCCAGGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 90 bp | CCGCCTTGTTGTAAAGTACGATGTCTGGTCGCCACACTAGACTGCTaGGAATTCGAATTGCATCCAAGTCACCGTAGGCTTTGGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PPCCKVRCLVATLDC*EFELHPSHRRLWGP Trigger: GGGACCCCAAAGCCTACGGTGACTTGGATGCAATTCGAATTCCCAGCAGTCTAGTGTGGCGACCAGACATCGTACTTTACAACAAGGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS GCA 90 bp | TGTCCGCCTTGTTGTAAAGTACGATGTCTGGTCGCCACACTAGACTaGTGGGAATTCGAATTGCATCCAAGTCACCGTAGGCTTTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CPPCCKVRCLVATLD*WEFELHPSHRRLWG Trigger: ACCCCAAAGCCTACGGTGACTTGGATGCAATTCGAATTCCCAGCAGTCTAGTGTGGCGACCAGACATCGTACTTTACAACAAGGCGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS-3UTR CAA 90 bp | GTCAGAAGTGCTGGTCCTGAAGAGGTGTCTCTGACTCTTAGCAGCACTTTGGGGCTGGTCTCAAGGCACTaGTATAGTTGGCAAACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VRSAGPEEVSLTLSSTLGLVSRH*YSWQTG Trigger: ACCTGTTTGCCAACTATACAAGTGCCTTGAGACCAG...CCCCAAAGTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACTTCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS GCA 72 bp | AGCGCACAGCGCCGTCGTGCCGCACAACCACGTTGGTaGTGGCCGAGGCAGGTGGCTGCGTGTCCGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SAQRRRAAQPRW*WPRQVAACPPC Trigger: ACAAGGCGGACACGCAGCCACCTGCCTCGGCCAGCACCAACGTGGTTGTGCGGCACGACGGCGCTGTGCGCT 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS GCA 72 bp | GACATCCACACGGCACGAGCTGCGTGTGATGGCCGGTaGGTCCCAGCGCACAGCGCCGTCGTGCCGCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: DIHTARAACDGR*VPAHSAVVPHN Trigger: GTTGTGCGGCACGACGGCGCTGTGCGCTGGGACGCACCGGCCATCACACGCAGCTCGTGCCGTGTGGATGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
||
| CDS GCA 72 bp | CTGGCGGAAGTGCCCCGAGGTCGCACATCCAGCTGGTaGCCGCCGTGCGTCCATGAGCCGAAGGTCAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LAEVPRGRTSSW*PPCVHEPKVRP Trigger: TGGCCTGACCTTCGGCTCATGGACGCACGGCGGGCACCAGCTGGATGTGCGACCTCGGGGCACTTCCGCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
||
| CDS CCA 72 bp | GCACAGCGCCGTCGTGCCGCACAACCACGTTGGTGCTaGCCGAGGCAGGTGGCTGCGTGTCCGCCTTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: AQRRRAAQPRWC*PRQVAACPPCC Trigger: ACAACAAGGCGGACACGCAGCCACCTGCCTCGGCCAGCACCAACGTGGTTGTGCGGCACGACGGCGCTGTGC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
||
| CDS CCA 72 bp | AGACTGGCGGAAGTGCCCCGAGGTCGCACATCCAGCTaGTGCCCGCCGTGCGTCCATGAGCCGAAGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLAEVPRGRTSS*CPPCVHEPKVR Trigger: CCTGACCTTCGGCTCATGGACGCACGGCGGGCACCAGCTGGATGTGCGACCTCGGGGCACTTCCGCCAGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
||
| CDS CCA 72 bp | ACTCTGGCCAGGCGCTTCCAATCTTCATGGCGGCGCTaGGCAGCCCGGTGGCTGCGGAAGGTGCCGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: TLARRFQSSWRR*AARWLRKVPAM Trigger: CATTGCCGGCACCTTCCGCAGCCACCGGGCTGCCCAGCGCCGCCATGAAGATTGGAAGCGCCTGGCCAGAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
||
| CDS CAA 72 bp | CCACAGGGCTCCCCTCGTTCCCGCACACACAGGCCTTaGGCTAGGTGTCCCAGCAGGAGGACCCGAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PQGSPRSRTHRP*ARCPSRRTRAQ Trigger: CTGGGCTCGGGTCCTCCTGCTGGGACACCTAGCCAAAGGCCTGTGTGTGCGGGAACGAGGGGAGCCCTGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
||
| CDS GCA 72 bp | CAACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAGTaGCCCGAGGTCGCACATCCAGCTGGTGCCCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: QRSPRSRPDWRK*PEVAHPAGARR Trigger: ACGGCGGGCACCAGCTGGATGTGCGACCTCGGGGCACTTCCGCCAGTCTGGCCGACTTCGTGGAGAACGTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 72 bp | GGAGCAGCAGCCGTAGGTGAGCACGCGCCTGCGCGCTaGCATGCCCAGCACACGCCATTCAACGTTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: GAAAVGEHAPAR*HAQHTPFNVLH Trigger: GTGGAGAACGTTGAATGGCGTGTGCTGGGCATGCCAGCGCGCAGGCGCGTGCTCACCTACGGCTGCTGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 72 bp | CGGTCCATTACTCTGGCCAGGCGCTTCCAATCTTCATaGCGGCGCTGGGCAGCCCGGTGGCTGCGGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RSITLARRFQSS*RRWAARWLRKV Trigger: CACCTTCCGCAGCCACCGGGCTGCCCAGCGCCGCCATGAAGATTGGAAGCGCCTGGCCAGAGTAATGGACCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS TCA 72 bp | AGGTCGCACATCCAGCTGGTGCCCGCCGTGCGTCCATaGGCCGAAGGTCAGGCCACAGCGCTGAGCGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: RSHIQLVPAVRP*AEGQATALSVK Trigger: TTTGACGCTCAGCGCTGTGGCCTGACCTTCGGCTCATGGACGCACGGCGGGCACCAGCTGGATGTGCGACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS TCA 72 bp | ACACATAGGCAGCTGCACGGCGGCGCAGCAGCAGAGTaGAGGTCACGTCTGGGTAGGGCTCGGAGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: THRQLHGGAAAE*RSRLGRARSSS Trigger: GCTGCTGCTCCGAGCCCTACCCAGACGTGACCTTCACTCTGCTGCTGCGCCGCCGTGCAGCTGCCTATGTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 72 bp | GCTGGGCAGCCCGGTGGCTGCGGAAGGTGCCGGCAATaGAAGCTACGTGATGCAGAAGGGCTTCTTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: AGQPGGCGRCRQ*KLRDAEGLLGG Trigger: GCCACCAAGAAGCCCTTCTGCATCACGTAGCTTCCATTGCCGGCACCTTCCGCAGCCACCGGGCTGCCCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS GCA 72 bp | TCCAATCTTCATGGCGGCGCTGGGCAGCCCGGTGGCTaGGGAAGGTGCCGGCAATGGAAGCTACGTGATGCA | + |
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Preference number: 6 (lower is better) Translates to: SNLHGGAGQPGG*GRCRQWKLRDA Trigger: TGCATCACGTAGCTTCCATTGCCGGCACCTTCCGCAGCCACCGGGCTGCCCAGCGCCGCCATGAAGATTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS TCA 72 bp | CCGTGCGTCCATGAGCCGAAGGTCAGGCCACAGCGCTaGGCGTCAAATGGGAAGGCAGAGACATCCACACGG | + |
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Preference number: 6 (lower is better) Translates to: PCVHEPKVRPQR*ASNGKAETSTR Trigger: CCGTGTGGATGTCTCTGCCTTCCCATTTGACGCTCAGCGCTGTGGCCTGACCTTCGGCTCATGGACGCACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 72 bp | CACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTaGCGGAAGTGCCCCGAGGTCGCACATCCAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HAIQRSPRSRPD*RKCPEVAHPAG Trigger: ACCAGCTGGATGTGCGACCTCGGGGCACTTCCGCCAGTCTGGCCGACTTCGTGGAGAACGTTGAATGGCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 72 bp | GTGCCGCACAACCACGTTGGTGCTGGCCGAGGCAGGTaGCTGCGTGTCCGCCTTGTTGTAAAGTACGATGTC | + |
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Preference number: 6 (lower is better) Translates to: VPHNHVGAGRGR*LRVRLVVKYDV Trigger: GACATCGTACTTTACAACAAGGCGGACACGCAGCCACCTGCCTCGGCCAGCACCAACGTGGTTGTGCGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS TCA 72 bp | CGGTGGCTGCGGAAGGTGCCGGCAATGGAAGCTACGTaGTGCAGAAGGGCTTCTTGGTGGCATAGACACCGT | + |
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Preference number: 6 (lower is better) Translates to: RWLRKVPAMEAT*CRRASWWHRHR Trigger: ACGGTGTCTATGCCACCAAGAAGCCCTTCTGCATCACGTAGCTTCCATTGCCGGCACCTTCCGCAGCCACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS GCA 72 bp | GGCCATATAGTACTTTCCGATGAGTGGAACGCTCTCTaGAGGTGGCATGCTCTCGGCCAGGATCAGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: GHIVLSDEWNAL*RWHALGQDQLE Trigger: TTCCAGCTGATCCTGGCCGAGAGCATGCCACCTGCAGAGAGCGTTCCACTCATCGGAAAGTACTATATGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 72 bp | ATAGTACTTTCCGATGAGTGGAACGCTCTCTGCAGGTaGCATGCTCTCGGCCAGGATCAGCTGGAAGACGGT | + |
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Preference number: 6 (lower is better) Translates to: IVLSDEWNALCR*HALGQDQLEDG Trigger: ACCGTCTTCCAGCTGATCCTGGCCGAGAGCATGCCACCTGCAGAGAGCGTTCCACTCATCGGAAAGTACTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 72 bp | AGAAGAAGATGCCTAGGAAAAAGCGGTCCATTACTCTaGCCAGGCGCTTCCAATCTTCATGGCGGCGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RRRCLGKSGPLL*PGASNLHGGAG Trigger: CCCAGCGCCGCCATGAAGATTGGAAGCGCCTGGCCAGAGTAATGGACCGCTTTTTCCTAGGCATCTTCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS GCA 72 bp | CAGCAGGAGGACCCGAGCCCAGGCAGGTACTGGATGTaGATTAGGGCCACAGTAATGCAGATTCATAATGAG | + |
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Preference number: 6 (lower is better) Translates to: QQEDPSPGRYWM*IRATVMQIHNE Trigger: CTCATTATGAATCTGCATTACTGTGGCCCTAATGCACATCCAGTACCTGCCTGGGCTCGGGTCCTCCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CAA 90 bp | GGCGTCTGTCCACTCCTGCCGGATCCACAGGTACAAGGTCAGCACTaGGTTCCGTTCATCCATATCAATGATCTGAGACAACGTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: GVCPLLPDPQVQGQH*VPFIHINDLRQRHL Trigger: GAGGTGACGTTGTCTCAGATCATTGATATGGATGAACGGAACCAAGTGCTGACCTTGTACCTGTGGATCCGGCAGGAGTGGACAGACGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 72 bp | TGGGAATTCGAATTGCATCCAAGTCACCGTAGGCTTTaGGGTCCCAATGTAGGTAGGCGTCTGTCCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: WEFELHPSHRRL*GPNVGRRLSTP Trigger: AGGAGTGGACAGACGCCTACCTACATTGGGACCCCAAAGCCTACGGTGACTTGGATGCAATTCGAATTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CAA 72 bp | TGTCTGGTCGCCACACTAGACTGCTGGGAATTCGAATaGCATCCAAGTCACCGTAGGCTTTGGGGTCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: CLVATLDCWEFE*HPSHRRLWGPN Trigger: ATTGGGACCCCAAAGCCTACGGTGACTTGGATGCAATTCGAATTCCCAGCAGTCTAGTGTGGCGACCAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CAA 90 bp | AAAGTACGATGTCTGGTCGCCACACTAGACTGCTGGGAATTCGAATaGCATCCAAGTCACCGTAGGCTTTGGGGTCCCAATGTAGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: KVRCLVATLDCWEFE*HPSHRRLWGPNVGR Trigger: CCTACCTACATTGGGACCCCAAAGCCTACGGTGACTTGGATGCAATTCGAATTCCCAGCAGTCTAGTGTGGCGACCAGACATCGTACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CAA 72 bp | GAGTCTGGTCTGTGTCTGCCACTGGTCTCAAGGCACTaGTATAGTTGGCAAACAGGTCACGAAACAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: ESGLCLPLVSRH*YSWQTGHETAC Trigger: ACAAGCTGTTTCGTGACCTGTTTGCCAACTATACAAGTGCCTTGAGACCAGTGGCAGACACAGACCAGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CAA 72 bp | CCACTCCTGCCGGATCCACAGGTACAAGGTCAGCACTaGGTTCCGTTCATCCATATCAATGATCTGAGACAA | + |
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Preference number: 6 (lower is better) Translates to: PLLPDPQVQGQH*VPFIHINDLRQ Trigger: TTGTCTCAGATCATTGATATGGATGAACGGAACCAAGTGCTGACCTTGTACCTGTGGATCCGGCAGGAGTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CAA 90 bp | TCACATTTAGAGTCTGGTCTGTGTCTGCCACTGGTCTCAAGGCACTaGTATAGTTGGCAAACAGGTCACGAAACAGCTTGTGAGCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SHLESGLCLPLVSRH*YSWQTGHETACEPV Trigger: GACTGGCTCACAAGCTGTTTCGTGACCTGTTTGCCAACTATACAAGTGCCTTGAGACCAGTGGCAGACACAGACCAGACTCTAAATGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS GCA 72 bp | TGTTGTAAAGTACGATGTCTGGTCGCCACACTAGACTaGTGGGAATTCGAATTGCATCCAAGTCACCGTAGG | + |
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Preference number: 6 (lower is better) Translates to: CCKVRCLVATLD*WEFELHPSHRR Trigger: CCTACGGTGACTTGGATGCAATTCGAATTCCCAGCAGTCTAGTGTGGCGACCAGACATCGTACTTTACAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS CCA 72 bp | TGTAAAGTACGATGTCTGGTCGCCACACTAGACTGCTaGGAATTCGAATTGCATCCAAGTCACCGTAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: CKVRCLVATLDC*EFELHPSHRRL Trigger: AAGCCTACGGTGACTTGGATGCAATTCGAATTCCCAGCAGTCTAGTGTGGCGACCAGACATCGTACTTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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| CDS TCA 72 bp | GTCAGCACTTGGTTCCGTTCATCCATATCAATGATCTaGGACAACGTCACCTCCAGGGTCACATTTAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: VSTWFRSSISMI*DNVTSRVTFRV Trigger: GACTCTAAATGTGACCCTGGAGGTGACGTTGTCTCAGATCATTGATATGGATGAACGGAACCAAGTGCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084830.2 |
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