Pregenerated sensors for CHRM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074939Ensembl transcript IDs: ENSMUST00000099589.4
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTGCTTCTACGGGAGGATGACCAGGAGGCCTGGTTCCGTACTCTCTaGGCCAGGCTGGGTCTAGGGCAGCTAAAGAAAGATCTGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: VLLREDDQEAWFRTL*ARLGLGQLKKDLSR Trigger: CCTGCTCAGATCTTTCTTTAGCTGCCCTAGACCCAGCCTGGCCCAGAGAGTACGGAACCAGGCCTCCTGGTCATCCTCCCGTAGAAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS GCA 90 bp | CAGCACTTAGATCAGTGGCCTGGGTTGGCTTTCCCGTTGTTGAGGTaGTTCTACGGGAGGATGACCAGGAGGCCTGGTTCCGTACTCTCT | + |
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Preference number: 5 (lower is better) Translates to: QHLDQWPGLAFPLLR*FYGRMTRRPGSVLS Trigger: AGAGAGTACGGAACCAGGCCTCCTGGTCATCCTCCCGTAGAAGCACCTCAACAACGGGAAAGCCAACCCAGGCCACTGATCTAAGTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CCA 90 bp | CCTTGGCCTCATTCTTGCAGACCACTTGAAAGACAGGGTCAGTGGTaGCCTTGGCTTCGTCCTCTGAAGAGGGGCAGCTGCTACAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: PWPHSCRPLERQGQW*PWLRPLKRGSCYSW Trigger: CCAACTGTAGCAGCTGCCCCTCTTCAGAGGACGAAGCCAAGGCCACCACTGACCCTGTCTTTCAAGTGGTCTGCAAGAATGAGGCCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS TCA 90 bp | GACCACTTGAAAGACAGGGTCAGTGGTGGCCTTGGCTTCGTCCTCTaGAGAGGGGCAGCTGCTACAGTTGGTAACCTGCTCAGCCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: DHLKDRVSGGLGFVL*RGAAATVGNLLSLF Trigger: GAAAAGGCTGAGCAGGTTACCAACTGTAGCAGCTGCCCCTCTTCAGAGGACGAAGCCAAGGCCACCACTGACCCTGTCTTTCAAGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS TCA 90 bp | AATTCCTTCCCCGGGCTTTCCTTGGCCTCATTCTTGCAGACCACTTaGAAGACAGGGTCAGTGGTGGCCTTGGCTTCGTCCTCTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: NSFPGLSLASFLQTT*KTGSVVALASSSEE Trigger: CTCTTCAGAGGACGAAGCCAAGGCCACCACTGACCCTGTCTTTCAAGTGGTCTGCAAGAATGAGGCCAAGGAAAGCCCGGGGAAGGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS GCA 90 bp | AGATCTGAGCAGGGTCCTGTGAGCCGGTTTTCTCTTCTTGACTTCTaGCACAGAATCGGAACCTTGGAGGTCAGCCAGGTCCTTGGTTCG | + |
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Preference number: 5 (lower is better) Translates to: RSEQGPVSRFSLLDF*HRIGTLEVSQVLGS Trigger: CGAACCAAGGACCTGGCTGACCTCCAAGGTTCCGATTCTGTGGCAGAAGTCAAGAAGAGAAAACCGGCTCACAGGACCCTGCTCAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS GCA 90 bp | TTGGCTTCGTCCTCTGAAGAGGGGCAGCTGCTACAGTTGGTAACCTaGTCAGCCTTTTCCCAGTCAGCACTTAGATCAGTGGCCTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: LASSSEEGQLLQLVT*SAFSQSALRSVAWV Trigger: AACCCAGGCCACTGATCTAAGTGCTGACTGGGAAAAGGCTGAGCAGGTTACCAACTGTAGCAGCTGCCCCTCTTCAGAGGACGAAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CCA 90 bp | GTAACCTGCTCAGCCTTTTCCCAGTCAGCACTTAGATCAGTGGCCTaGGTTGGCTTTCCCGTTGTTGAGGTGCTTCTACGGGAGGATGAC | + |
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Preference number: 5 (lower is better) Translates to: VTCSAFSQSALRSVA*VGFPVVEVLLREDD Trigger: GTCATCCTCCCGTAGAAGCACCTCAACAACGGGAAAGCCAACCCAGGCCACTGATCTAAGTGCTGACTGGGAAAAGGCTGAGCAGGTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CCA 90 bp | TTTCCTTGGCCTCATTCTTGCAGACCACTTGAAAGACAGGGTCAGTaGTGGCCTTGGCTTCGTCCTCTGAAGAGGGGCAGCTGCTACAGT | + |
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Preference number: 5 (lower is better) Translates to: FPWPHSCRPLERQGQ*WPWLRPLKRGSCYS Trigger: ACTGTAGCAGCTGCCCCTCTTCAGAGGACGAAGCCAAGGCCACCACTGACCCTGTCTTTCAAGTGGTCTGCAAGAATGAGGCCAAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS GCA 90 bp | GACATTGCCGACAATGGTCATCAGACTGACCACAGCGGTCACAGCTaGAATAGTAATGACTTCCCACAGTCCATGGCGTTCCAAAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: DIADNGHQTDHSGHS*NSNDFPQSMAFQSL Trigger: CAGGCTTTGGAACGCCATGGACTGTGGGAAGTCATTACTATTGCAGCTGTGACCGCTGTGGTCAGTCTGATGACCATTGTCGGCAATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS TCA 90 bp | TTTCAGTCCGAGGGCTCACAAACGTTTCCTTGGTCTCTTGGGTATTaGATTCCTTCCCCGGGCTTTCCTTGGCCTCATTCTTGCAGACCA | + |
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Preference number: 5 (lower is better) Translates to: FQSEGSQTFPWSLGY*IPSPGFPWPHSCRP Trigger: TGGTCTGCAAGAATGAGGCCAAGGAAAGCCCGGGGAAGGAATTCAATACCCAAGAGACCAAGGAAACGTTTGTGAGCCCTCGGACTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CCA 90 bp | AATGACTTCCCACAGTCCATGGCGTTCCAAAGCCTGGTGATTTACTaGGGTGCCGTTGACAGTGGTTTCATTGTGATAAGACTCCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: NDFPQSMAFQSLVIY*GAVDSGFIVIRLPF Trigger: GAAGGGGAGTCTTATCACAATGAAACCACTGTCAACGGCACCCCAGTAAATCACCAGGCTTTGGAACGCCATGGACTGTGGGAAGTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CCA 90 bp | TCATTGTTTTCAGTCCGAGGGCTCACAAACGTTTCCTTGGTCTCTTaGGTATTGAATTCCTTCCCCGGGCTTTCCTTGGCCTCATTCTTG | + |
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Preference number: 5 (lower is better) Translates to: SLFSVRGLTNVSLVS*VLNSFPGLSLASFL Trigger: CAAGAATGAGGCCAAGGAAAGCCCGGGGAAGGAATTCAATACCCAAGAGACCAAGGAAACGTTTGTGAGCCCTCGGACTGAAAACAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS TCA 90 bp | CTTTTACCACCAATCGGAACTTATAGGCAACACACTTCTGACTCTTaGGTCTGTGAGCAGCACCTGGAGACAGGAAGTACTTGGGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: LLPPIGTYRQHTSDS*VCEQHLETGSTWEC Trigger: ACACTCCCAAGTACTTCCTGTCTCCAGGTGCTGCTCACAGACTCAAGAGTCAGAAGTGTGTTGCCTATAAGTTCCGATTGGTGGTAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS TCA 90 bp | GCTTTCCTCTCTTTGACTAGGACCATTCTCTTTCGTTTGGTCATTTaGTGGCTGAGGTGGGGATCCAGGCCTTTTGTTGAAGGGTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: AFLSLTRTILFRLVI*WLRWGSRPFVEGSL Trigger: CAAAGACCCTTCAACAAAAGGCCTGGATCCCCACCTCAGCCATCAAATGACCAAACGAAAGAGAATGGTCCTAGTCAAAGAGAGGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CCA 90 bp | CTTATAGGCAACACACTTCTGACTCTTGAGTCTGTGAGCAGCACCTaGAGACAGGAAGTACTTGGGAGTGTCATAGTCATTGTTTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: LIGNTLLTLESVSST*RQEVLGSVIVIVFS Trigger: ACTGAAAACAATGACTATGACACTCCCAAGTACTTCCTGTCTCCAGGTGCTGCTCACAGACTCAAGAGTCAGAAGTGTGTTGCCTATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS GCA 72 bp | GATCAGTGGCCTGGGTTGGCTTTCCCGTTGTTGAGGTaGTTCTACGGGAGGATGACCAGGAGGCCTGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: DQWPGLAFPLLR*FYGRMTRRPGS Trigger: GGAACCAGGCCTCCTGGTCATCCTCCCGTAGAAGCACCTCAACAACGGGAAAGCCAACCCAGGCCACTGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 90 bp | CCCAGTCAGCACTTAGATCAGTGGCCTGGGTTGGCTTTCCCGTTGTaGAGGTGCTTCTACGGGAGGATGACCAGGAGGCCTGGTTCCGTA | + |
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Preference number: 6 (lower is better) Translates to: PSQHLDQWPGLAFPL*RCFYGRMTRRPGSV Trigger: TACGGAACCAGGCCTCCTGGTCATCCTCCCGTAGAAGCACCTCAACAACGGGAAAGCCAACCCAGGCCACTGATCTAAGTGCTGACTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS TCA 72 bp | CCCGGGCTTTCCTTGGCCTCATTCTTGCAGACCACTTaGAAGACAGGGTCAGTGGTGGCCTTGGCTTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: PGLSLASFLQTT*KTGSVVALASS Trigger: GGACGAAGCCAAGGCCACCACTGACCCTGTCTTTCAAGTGGTCTGCAAGAATGAGGCCAAGGAAAGCCCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 90 bp | TTTCCCAGTCAGCACTTAGATCAGTGGCCTGGGTTGGCTTTCCCGTaGTTGAGGTGCTTCTACGGGAGGATGACCAGGAGGCCTGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: FPSQHLDQWPGLAFP*LRCFYGRMTRRPGS Trigger: GGAACCAGGCCTCCTGGTCATCCTCCCGTAGAAGCACCTCAACAACGGGAAAGCCAACCCAGGCCACTGATCTAAGTGCTGACTGGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 90 bp | CCTGCTCAGCCTTTTCCCAGTCAGCACTTAGATCAGTGGCCTGGGTaGGCTTTCCCGTTGTTGAGGTGCTTCTACGGGAGGATGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: PAQPFPSQHLDQWPG*AFPLLRCFYGRMTR Trigger: CCTGGTCATCCTCCCGTAGAAGCACCTCAACAACGGGAAAGCCAACCCAGGCCACTGATCTAAGTGCTGACTGGGAAAAGGCTGAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CCA 72 bp | TGCAGACCACTTGAAAGACAGGGTCAGTGGTGGCCTTaGCTTCGTCCTCTGAAGAGGGGCAGCTGCTACAGT | + |
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Preference number: 6 (lower is better) Translates to: CRPLERQGQWWP*LRPLKRGSCYS Trigger: ACTGTAGCAGCTGCCCCTCTTCAGAGGACGAAGCCAAGGCCACCACTGACCCTGTCTTTCAAGTGGTCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 72 bp | CACTTAGATCAGTGGCCTGGGTTGGCTTTCCCGTTGTaGAGGTGCTTCTACGGGAGGATGACCAGGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: HLDQWPGLAFPL*RCFYGRMTRRP Trigger: AGGCCTCCTGGTCATCCTCCCGTAGAAGCACCTCAACAACGGGAAAGCCAACCCAGGCCACTGATCTAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 72 bp | CAGCACTTAGATCAGTGGCCTGGGTTGGCTTTCCCGTaGTTGAGGTGCTTCTACGGGAGGATGACCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: QHLDQWPGLAFP*LRCFYGRMTRR Trigger: CCTCCTGGTCATCCTCCCGTAGAAGCACCTCAACAACGGGAAAGCCAACCCAGGCCACTGATCTAAGTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 90 bp | GTGGTGGCCTTGGCTTCGTCCTCTGAAGAGGGGCAGCTGCTACAGTaGGTAACCTGCTCAGCCTTTTCCCAGTCAGCACTTAGATCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VVALASSSEEGQLLQ*VTCSAFSQSALRSV Trigger: CACTGATCTAAGTGCTGACTGGGAAAAGGCTGAGCAGGTTACCAACTGTAGCAGCTGCCCCTCTTCAGAGGACGAAGCCAAGGCCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CCA 72 bp | CCTGCTCAGCCTTTTCCCAGTCAGCACTTAGATCAGTaGCCTGGGTTGGCTTTCCCGTTGTTGAGGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PAQPFPSQHLDQ*PGLAFPLLRCF Trigger: GAAGCACCTCAACAACGGGAAAGCCAACCCAGGCCACTGATCTAAGTGCTGACTGGGAAAAGGCTGAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 72 bp | CCTTTTCCCAGTCAGCACTTAGATCAGTGGCCTGGGTaGGCTTTCCCGTTGTTGAGGTGCTTCTACGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: PFPSQHLDQWPG*AFPLLRCFYGR Trigger: CCTCCCGTAGAAGCACCTCAACAACGGGAAAGCCAACCCAGGCCACTGATCTAAGTGCTGACTGGGAAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CCA 72 bp | TCAGTCCGAGGGCTCACAAACGTTTCCTTGGTCTCTTaGGTATTGAATTCCTTCCCCGGGCTTTCCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SVRGLTNVSLVS*VLNSFPGLSLA Trigger: GGCCAAGGAAAGCCCGGGGAAGGAATTCAATACCCAAGAGACCAAGGAAACGTTTGTGAGCCCTCGGACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 72 bp | TTGGCTTCGTCCTCTGAAGAGGGGCAGCTGCTACAGTaGGTAACCTGCTCAGCCTTTTCCCAGTCAGCACTT | + |
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Preference number: 6 (lower is better) Translates to: LASSSEEGQLLQ*VTCSAFSQSAL Trigger: AAGTGCTGACTGGGAAAAGGCTGAGCAGGTTACCAACTGTAGCAGCTGCCCCTCTTCAGAGGACGAAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 72 bp | CGAGGGCTCACAAACGTTTCCTTGGTCTCTTGGGTATaGAATTCCTTCCCCGGGCTTTCCTTGGCCTCATTC | + |
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Preference number: 6 (lower is better) Translates to: RGLTNVSLVSWV*NSFPGLSLASF Trigger: GAATGAGGCCAAGGAAAGCCCGGGGAAGGAATTCAATACCCAAGAGACCAAGGAAACGTTTGTGAGCCCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 90 bp | GTGAGCCGGTTTTCTCTTCTTGACTTCTGCCACAGAATCGGAACCTaGGAGGTCAGCCAGGTCCTTGGTTCGTTTCTCTGTTTCCCGGTA | + |
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Preference number: 6 (lower is better) Translates to: VSRFSLLDFCHRIGT*EVSQVLGSFLCFPV Trigger: TACCGGGAAACAGAGAAACGAACCAAGGACCTGGCTGACCTCCAAGGTTCCGATTCTGTGGCAGAAGTCAAGAAGAGAAAACCGGCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 90 bp | TTTTCAGTCCGAGGGCTCACAAACGTTTCCTTGGTCTCTTGGGTATaGAATTCCTTCCCCGGGCTTTCCTTGGCCTCATTCTTGCAGACC | + |
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Preference number: 6 (lower is better) Translates to: FSVRGLTNVSLVSWV*NSFPGLSLASFLQT Trigger: GGTCTGCAAGAATGAGGCCAAGGAAAGCCCGGGGAAGGAATTCAATACCCAAGAGACCAAGGAAACGTTTGTGAGCCCTCGGACTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 90 bp | GACACTGGGAAGGAACAGGGCATGATTTTCACCTTACGACAGCCATaGTTTGTCTCCTGGGTCCCGTCAGCTTTTACCACCAATCGGAAC | + |
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Preference number: 6 (lower is better) Translates to: DTGKEQGMIFTLRQP*FVSWVPSAFTTNRN Trigger: GTTCCGATTGGTGGTAAAAGCTGACGGGACCCAGGAGACAAACAATGGCTGTCGTAAGGTGAAAATCATGCCCTGTTCCTTCCCAGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS TCA 72 bp | GGCGTTCCAAAGCCTGGTGATTTACTGGGGTGCCGTTaGCAGTGGTTTCATTGTGATAAGACTCCCCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: GVPKPGDLLGCR*QWFHCDKTPLP Trigger: TGGAAGGGGAGTCTTATCACAATGAAACCACTGTCAACGGCACCCCAGTAAATCACCAGGCTTTGGAACGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS TCA 72 bp | ATGACTTCCCACAGTCCATGGCGTTCCAAAGCCTGGTaGTTTACTGGGGTGCCGTTGACAGTGGTTTCATTG | + |
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Preference number: 6 (lower is better) Translates to: MTSHSPWRSKAW*FTGVPLTVVSL Trigger: CAATGAAACCACTGTCAACGGCACCCCAGTAAATCACCAGGCTTTGGAACGCCATGGACTGTGGGAAGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS TCA 72 bp | GAGGGCTCACAAACGTTTCCTTGGTCTCTTGGGTATTaGATTCCTTCCCCGGGCTTTCCTTGGCCTCATTCT | + |
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Preference number: 6 (lower is better) Translates to: EGSQTFPWSLGY*IPSPGFPWPHS Trigger: AGAATGAGGCCAAGGAAAGCCCGGGGAAGGAATTCAATACCCAAGAGACCAAGGAAACGTTTGTGAGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS GCA 72 bp | GACAATGGTCATCAGACTGACCACAGCGGTCACAGCTaGAATAGTAATGACTTCCCACAGTCCATGGCGTTC | + |
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Preference number: 6 (lower is better) Translates to: DNGHQTDHSGHS*NSNDFPQSMAF Trigger: GAACGCCATGGACTGTGGGAAGTCATTACTATTGCAGCTGTGACCGCTGTGGTCAGTCTGATGACCATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CCA 72 bp | CCACAGTCCATGGCGTTCCAAAGCCTGGTGATTTACTaGGGTGCCGTTGACAGTGGTTTCATTGTGATAAGA | + |
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Preference number: 6 (lower is better) Translates to: PQSMAFQSLVIY*GAVDSGFIVIR Trigger: TCTTATCACAATGAAACCACTGTCAACGGCACCCCAGTAAATCACCAGGCTTTGGAACGCCATGGACTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 72 bp | AAGGAACAGGGCATGATTTTCACCTTACGACAGCCATaGTTTGTCTCCTGGGTCCCGTCAGCTTTTACCACC | + |
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Preference number: 6 (lower is better) Translates to: KEQGMIFTLRQP*FVSWVPSAFTT Trigger: GGTGGTAAAAGCTGACGGGACCCAGGAGACAAACAATGGCTGTCGTAAGGTGAAAATCATGCCCTGTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 90 bp | GTCATTGTTTTCAGTCCGAGGGCTCACAAACGTTTCCTTGGTCTCTaGGGTATTGAATTCCTTCCCCGGGCTTTCCTTGGCCTCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: VIVFSPRAHKRFLGL*GIEFLPRAFLGLIL Trigger: AAGAATGAGGCCAAGGAAAGCCCGGGGAAGGAATTCAATACCCAAGAGACCAAGGAAACGTTTGTGAGCCCTCGGACTGAAAACAATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS TCA 72 bp | CCAATCGGAACTTATAGGCAACACACTTCTGACTCTTaGGTCTGTGAGCAGCACCTGGAGACAGGAAGTACT | + |
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Preference number: 6 (lower is better) Translates to: PIGTYRQHTSDS*VCEQHLETGST Trigger: AGTACTTCCTGTCTCCAGGTGCTGCTCACAGACTCAAGAGTCAGAAGTGTGTTGCCTATAAGTTCCGATTGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS TCA 72 bp | GAATGGCGCTCAAGGTCTGCGCCGCTTTCCTCTCTTTaGCTAGGACCATTCTCTTTCGTTTGGTCATTTGAT | + |
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Preference number: 6 (lower is better) Translates to: EWRSRSAPLSSL*LGPFSFVWSFD Trigger: ATCAAATGACCAAACGAAAGAGAATGGTCCTAGTCAAAGAGAGGAAAGCGGCGCAGACCTTGAGCGCCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CCA 72 bp | TTTCTCTTCTTGACTTCTGCCACAGAATCGGAACCTTaGAGGTCAGCCAGGTCCTTGGTTCGTTTCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: FLFLTSATESEP*RSARSLVRFSV Trigger: AACAGAGAAACGAACCAAGGACCTGGCTGACCTCCAAGGTTCCGATTCTGTGGCAGAAGTCAAGAAGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CAA 72 bp | TTTTCTCTTCTTGACTTCTGCCACAGAATCGGAACCTaGGAGGTCAGCCAGGTCCTTGGTTCGTTTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: FSLLDFCHRIGT*EVSQVLGSFLC Trigger: ACAGAGAAACGAACCAAGGACCTGGCTGACCTCCAAGGTTCCGATTCTGTGGCAGAAGTCAAGAAGAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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| CDS CCA 72 bp | AACACACTTCTGACTCTTGAGTCTGTGAGCAGCACCTaGAGACAGGAAGTACTTGGGAGTGTCATAGTCATT | + |
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Preference number: 6 (lower is better) Translates to: NTLLTLESVSST*RQEVLGSVIVI Trigger: AATGACTATGACACTCCCAAGTACTTCCTGTCTCCAGGTGCTGCTCACAGACTCAAGAGTCAGAAGTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099589.4 |
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