Pregenerated sensors for CHRM4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040495Ensembl transcript IDs: ENSMUST00000045537.4
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGGGCAGCGCTGGTGTGGTGGCGGCCTCTGTGGTGGACAGCTCTGTaGGTGGCCGTTCCTTGGTGTTCTGGGTGGCACTGCCTGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: RAALVWWRPLWWTAL*VAVPWCSGWHCLSW Trigger: CCAGCTCAGGCAGTGCCACCCAGAACACCAAGGAACGGCCACCCACAGAGCTGTCCACCACAGAGGCCGCCACCACACCAGCGCTGCCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 90 bp | CCCGGGCCGCCATCTGCCGCTTCTTGCGCACCTGGTTACGAGCGATaGTGGCAAACTTTCGGGCCACATTGGCTGCTGGGCGCATACCAG | + |
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Preference number: 5 (lower is better) Translates to: PGPPSAASCAPGYER*WQTFGPHWLLGAYQ Trigger: CTGGTATGCGCCCAGCAGCCAATGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACCAGGTGCGCAAGAAGCGGCAGATGGCGGCCCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 90 bp | GCCGTTCCTTGGTGTTCTGGGTGGCACTGCCTGAGCTGGACTCATTaGAAGTGTCCTTGTCAGCCACTGGGCGTGGAGGCGGGGGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: AVPWCSGWHCLSWTH*KCPCQPLGVEAGAG Trigger: CCCTGCCCCCGCCTCCACGCCCAGTGGCTGACAAGGACACTTCCAATGAGTCCAGCTCAGGCAGTGCCACCCAGAACACCAAGGAACGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 90 bp | ATTTGGATCTTGGACCACTTGGAGGCTGGGTTGAGGGTTCGTGGCTaGAGGGTAGGAGCGGGCAGCGCTGGTGTGGTGGCGGCCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: IWILDHLEAGLRVRG*RVGAGSAGVVAASV Trigger: CACAGAGGCCGCCACCACACCAGCGCTGCCCGCTCCTACCCTGCAGCCACGAACCCTCAACCCAGCCTCCAAGTGGTCCAAGATCCAAAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 90 bp | CACAATTTGGATCTTGGACCACTTGGAGGCTGGGTTGAGGGTTCGTaGCTGCAGGGTAGGAGCGGGCAGCGCTGGTGTGGTGGCGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: HNLDLGPLGGWVEGS*LQGRSGQRWCGGGL Trigger: GAGGCCGCCACCACACCAGCGCTGCCCGCTCCTACCCTGCAGCCACGAACCCTCAACCCAGCCTCCAAGTGGTCCAAGATCCAAATTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 90 bp | GGGCCGCCATCTGCCGCTTCTTGCGCACCTGGTTACGAGCGATGCTaGCAAACTTTCGGGCCACATTGGCTGCTGGGCGCATACCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: GPPSAASCAPGYERC*QTFGPHWLLGAYQL Trigger: CAGCTGGTATGCGCCCAGCAGCCAATGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACCAGGTGCGCAAGAAGCGGCAGATGGCGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 90 bp | CTGTGGGTGGCCGTTCCTTGGTGTTCTGGGTGGCACTGCCTGAGCTaGACTCATTGGAAGTGTCCTTGTCAGCCACTGGGCGTGGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: LWVAVPWCSGWHCLS*THWKCPCQPLGVEA Trigger: CGCCTCCACGCCCAGTGGCTGACAAGGACACTTCCAATGAGTCCAGCTCAGGCAGTGCCACCCAGAACACCAAGGAACGGCCACCCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 90 bp | GTCACTTTGCGCTCCCGGGCCGCCATCTGCCGCTTCTTGCGCACCTaGTTACGAGCGATGCTGGCAAACTTTCGGGCCACATTGGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VTLRSRAAICRFLRT*LRAMLANFRATLAA Trigger: AGCAGCCAATGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACCAGGTGCGCAAGAAGCGGCAGATGGCGGCCCGGGAGCGCAAAGTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS TCA 90 bp | CAGCTCTGTGGGTGGCCGTTCCTTGGTGTTCTGGGTGGCACTGCCTaGGCTGGACTCATTGGAAGTGTCCTTGTCAGCCACTGGGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: QLCGWPFLGVLGGTA*AGLIGSVLVSHWAW Trigger: CCACGCCCAGTGGCTGACAAGGACACTTCCAATGAGTCCAGCTCAGGCAGTGCCACCCAGAACACCAAGGAACGGCCACCCACAGAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 90 bp | CACCTGGTTACGAGCGATGCTGGCAAACTTTCGGGCCACATTGGCTaGTGGGCGCATACCAGCTGGCGTGGCAGGTACGATCTCGATGGC | + |
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Preference number: 5 (lower is better) Translates to: HLVTSDAGKLSGHIG*WAHTSWRGRYDLDG Trigger: GCCATCGAGATCGTACCTGCCACGCCAGCTGGTATGCGCCCAGCAGCCAATGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACCAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 90 bp | TTGTCCGAGTCACTTTGCGCTCCCGGGCCGCCATCTGCCGCTTCTTaGGCACCTGGTTACGAGCGATGCTGGCAAACTTTCGGGCCACAT | + |
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Preference number: 5 (lower is better) Translates to: LSESLCAPGPPSAAS*APGYERCWQTFGPH Trigger: ATGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACCAGGTGCGCAAGAAGCGGCAGATGGCGGCCCGGGAGCGCAAAGTGACTCGGACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 90 bp | TGCGCACCTGGTTACGAGCGATGCTGGCAAACTTTCGGGCCACATTaGCTGCTGGGCGCATACCAGCTGGCGTGGCAGGTACGATCTCGA | + |
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Preference number: 5 (lower is better) Translates to: CAPGYERCWQTFGPH*LLGAYQLAWQVRSR Trigger: TCGAGATCGTACCTGCCACGCCAGCTGGTATGCGCCCAGCAGCCAATGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACCAGGTGCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 90 bp | TGGACAGCTCTGTGGGTGGCCGTTCCTTGGTGTTCTGGGTGGCACTaGCTGAGCTGGACTCATTGGAAGTGTCCTTGTCAGCCACTGGGC | + |
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Preference number: 5 (lower is better) Translates to: WTALWVAVPWCSGWH*LSWTHWKCPCQPLG Trigger: GCCCAGTGGCTGACAAGGACACTTCCAATGAGTCCAGCTCAGGCAGTGCCACCCAGAACACCAAGGAACGGCCACCCACAGAGCTGTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 90 bp | GCCTGTCTGCTTTGTCACAATTTGGATCTTGGACCACTTGGAGGCTaGGTTGAGGGTTCGTGGCTGCAGGGTAGGAGCGGGCAGCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: ACLLCHNLDLGPLGG*VEGSWLQGRSGQRW Trigger: CCAGCGCTGCCCGCTCCTACCCTGCAGCCACGAACCCTCAACCCAGCCTCCAAGTGGTCCAAGATCCAAATTGTGACAAAGCAGACAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 90 bp | CTGGTTACGAGCGATGCTGGCAAACTTTCGGGCCACATTGGCTGCTaGGCGCATACCAGCTGGCGTGGCAGGTACGATCTCGATGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LVTSDAGKLSGHIGC*AHTSWRGRYDLDGS Trigger: ACTGCCATCGAGATCGTACCTGCCACGCCAGCTGGTATGCGCCCAGCAGCCAATGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 90 bp | CTGTGGTGGACAGCTCTGTGGGTGGCCGTTCCTTGGTGTTCTGGGTaGCACTGCCTGAGCTGGACTCATTGGAAGTGTCCTTGTCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: LWWTALWVAVPWCSG*HCLSWTHWKCPCQP Trigger: TGGCTGACAAGGACACTTCCAATGAGTCCAGCTCAGGCAGTGCCACCCAGAACACCAAGGAACGGCCACCCACAGAGCTGTCCACCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 90 bp | ATGGCAAAGATTGTCCGAGTCACTTTGCGCTCCCGGGCCGCCATCTaGCGCTTCTTGCGCACCTGGTTACGAGCGATGCTGGCAAACTTT | + |
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Preference number: 5 (lower is better) Translates to: MAKIVRVTLRSRAAI*RFLRTWLRAMLANF Trigger: AAAGTTTGCCAGCATCGCTCGTAACCAGGTGCGCAAGAAGCGGCAGATGGCGGCCCGGGAGCGCAAAGTGACTCGGACAATCTTTGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 90 bp | TGGCTGCTGGGCGCATACCAGCTGGCGTGGCAGGTACGATCTCGATaGCAGTCACACATTCACTGCCTGTCTGCTTTGTCACAATTTGGA | + |
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Preference number: 5 (lower is better) Translates to: WLLGAYQLAWQVRSR*QSHIHCLSALSQFG Trigger: TCCAAATTGTGACAAAGCAGACAGGCAGTGAATGTGTGACTGCCATCGAGATCGTACCTGCCACGCCAGCTGGTATGCGCCCAGCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 90 bp | CAGCTGGCGTGGCAGGTACGATCTCGATGGCAGTCACACATTCACTaGCTGTCTGCTTTGTCACAATTTGGATCTTGGACCACTTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: QLAWQVRSRWQSHIH*LSALSQFGSWTTWR Trigger: CCTCCAAGTGGTCCAAGATCCAAATTGTGACAAAGCAGACAGGCAGTGAATGTGTGACTGCCATCGAGATCGTACCTGCCACGCCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 90 bp | TCGATGGCAGTCACACATTCACTGCCTGTCTGCTTTGTCACAATTTaGATCTTGGACCACTTGGAGGCTGGGTTGAGGGTTCGTGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SMAVTHSLPVCFVTI*ILDHLEAGLRVRGC Trigger: GCAGCCACGAACCCTCAACCCAGCCTCCAAGTGGTCCAAGATCCAAATTGTGACAAAGCAGACAGGCAGTGAATGTGTGACTGCCATCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | GAGGGTTCGTGGCTGCAGGGTAGGAGCGGGCAGCGCTaGTGTGGTGGCGGCCTCTGTGGTGGACAGCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: EGSWLQGRSGQR*CGGGLCGGQLC Trigger: ACAGAGCTGTCCACCACAGAGGCCGCCACCACACCAGCGCTGCCCGCTCCTACCCTGCAGCCACGAACCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 72 bp | TTGGACCACTTGGAGGCTGGGTTGAGGGTTCGTGGCTaGAGGGTAGGAGCGGGCAGCGCTGGTGTGGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: LDHLEAGLRVRG*RVGAGSAGVVA Trigger: CGCCACCACACCAGCGCTGCCCGCTCCTACCCTGCAGCCACGAACCCTCAACCCAGCCTCCAAGTGGTCCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | GAGCGGGCAGCGCTGGTGTGGTGGCGGCCTCTGTGGTaGACAGCTCTGTGGGTGGCCGTTCCTTGGTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: ERAALVWWRPLW*TALWVAVPWCS Trigger: AGAACACCAAGGAACGGCCACCCACAGAGCTGTCCACCACAGAGGCCGCCACCACACCAGCGCTGCCCGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | CTGGTGTGGTGGCGGCCTCTGTGGTGGACAGCTCTGTaGGTGGCCGTTCCTTGGTGTTCTGGGTGGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: LVWWRPLWWTAL*VAVPWCSGWHC Trigger: GCAGTGCCACCCAGAACACCAAGGAACGGCCACCCACAGAGCTGTCCACCACAGAGGCCGCCACCACACCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | CGCTCCCGGGCCGCCATCTGCCGCTTCTTGCGCACCTaGTTACGAGCGATGCTGGCAAACTTTCGGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: RSRAAICRFLRT*LRAMLANFRAT Trigger: TGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACCAGGTGCGCAAGAAGCGGCAGATGGCGGCCCGGGAGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 90 bp | GGCCGTTCCTTGGTGTTCTGGGTGGCACTGCCTGAGCTGGACTCATaGGAAGTGTCCTTGTCAGCCACTGGGCGTGGAGGCGGGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GRSLVFWVALPELDS*EVSLSATGRGGGGR Trigger: CCTGCCCCCGCCTCCACGCCCAGTGGCTGACAAGGACACTTCCAATGAGTCCAGCTCAGGCAGTGCCACCCAGAACACCAAGGAACGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | GATCTTGGACCACTTGGAGGCTGGGTTGAGGGTTCGTaGCTGCAGGGTAGGAGCGGGCAGCGCTGGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: DLGPLGGWVEGS*LQGRSGQRWCG Trigger: ACCACACCAGCGCTGCCCGCTCCTACCCTGCAGCCACGAACCCTCAACCCAGCCTCCAAGTGGTCCAAGATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 72 bp | ATTGTCCGAGTCACTTTGCGCTCCCGGGCCGCCATCTaGCGCTTCTTGCGCACCTGGTTACGAGCGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: IVRVTLRSRAAI*RFLRTWLRAML Trigger: CAGCATCGCTCGTAACCAGGTGCGCAAGAAGCGGCAGATGGCGGCCCGGGAGCGCAAAGTGACTCGGACAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 90 bp | TTGCGCACCTGGTTACGAGCGATGCTGGCAAACTTTCGGGCCACATaGGCTGCTGGGCGCATACCAGCTGGCGTGGCAGGTACGATCTCG | + |
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Preference number: 6 (lower is better) Translates to: LRTWLRAMLANFRAT*AAGRIPAGVAGTIS Trigger: CGAGATCGTACCTGCCACGCCAGCTGGTATGCGCCCAGCAGCCAATGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACCAGGTGCGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 90 bp | ATTGTCCGAGTCACTTTGCGCTCCCGGGCCGCCATCTGCCGCTTCTaGCGCACCTGGTTACGAGCGATGCTGGCAAACTTTCGGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: IVRVTLRSRAAICRF*RTWLRAMLANFRAT Trigger: TGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACCAGGTGCGCAAGAAGCGGCAGATGGCGGCCCGGGAGCGCAAAGTGACTCGGACAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 72 bp | CCTTGGGGCCCTCGGGTCGATGCTTGTGAACACGGCTaGGGCTGGCCAGCGAGATATGAATATACAGCACCG | + |
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Preference number: 6 (lower is better) Translates to: PWGPRVDACEHG*GWPARYEYTAP Trigger: CGGTGCTGTATATTCATATCTCGCTGGCCAGCCGCAGCCGTGTTCACAAGCATCGACCCGAGGGCCCCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 72 bp | ACGAGCGATGCTGGCAAACTTTCGGGCCACATTGGCTaGTGGGCGCATACCAGCTGGCGTGGCAGGTACGAT | + |
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Preference number: 6 (lower is better) Translates to: TSDAGKLSGHIG*WAHTSWRGRYD Trigger: ATCGTACCTGCCACGCCAGCTGGTATGCGCCCAGCAGCCAATGTGGCCCGAAAGTTTGCCAGCATCGCTCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 72 bp | CCATCTGCCGCTTCTTGCGCACCTGGTTACGAGCGATaGTGGCAAACTTTCGGGCCACATTGGCTGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: PSAASCAPGYER*WQTFGPHWLLG Trigger: GCCCAGCAGCCAATGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACCAGGTGCGCAAGAAGCGGCAGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 72 bp | TCACTTTGCGCTCCCGGGCCGCCATCTGCCGCTTCTTaGGCACCTGGTTACGAGCGATGCTGGCAAACTTTC | + |
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Preference number: 6 (lower is better) Translates to: SLCAPGPPSAAS*APGYERCWQTF Trigger: GAAAGTTTGCCAGCATCGCTCGTAACCAGGTGCGCAAGAAGCGGCAGATGGCGGCCCGGGAGCGCAAAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 72 bp | AGGCCAGCAGAATGGCAAAGATTGTCCGAGTCACTTTaGGCTCCCGGGCCGCCATCTGCCGCTTCTTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: RPAEWQRLSESL*APGPPSAASCA Trigger: TGCGCAAGAAGCGGCAGATGGCGGCCCGGGAGCGCAAAGTGACTCGGACAATCTTTGCCATTCTGCTGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | TGGTGTTCTGGGTGGCACTGCCTGAGCTGGACTCATTaGAAGTGTCCTTGTCAGCCACTGGGCGTGGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: WCSGWHCLSWTH*KCPCQPLGVEA Trigger: CGCCTCCACGCCCAGTGGCTGACAAGGACACTTCCAATGAGTCCAGCTCAGGCAGTGCCACCCAGAACACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | AGCGATGCTGGCAAACTTTCGGGCCACATTGGCTGCTaGGCGCATACCAGCTGGCGTGGCAGGTACGATCTC | + |
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Preference number: 6 (lower is better) Translates to: SDAGKLSGHIGC*AHTSWRGRYDL Trigger: GAGATCGTACCTGCCACGCCAGCTGGTATGCGCCCAGCAGCCAATGTGGCCCGAAAGTTTGCCAGCATCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | GGTTACGAGCGATGCTGGCAAACTTTCGGGCCACATTaGCTGCTGGGCGCATACCAGCTGGCGTGGCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: GYERCWQTFGPH*LLGAYQLAWQV Trigger: TACCTGCCACGCCAGCTGGTATGCGCCCAGCAGCCAATGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | TCTGCCGCTTCTTGCGCACCTGGTTACGAGCGATGCTaGCAAACTTTCGGGCCACATTGGCTGCTGGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: SAASCAPGYERC*QTFGPHWLLGA Trigger: TGCGCCCAGCAGCCAATGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACCAGGTGCGCAAGAAGCGGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 72 bp | TGGTTACGAGCGATGCTGGCAAACTTTCGGGCCACATaGGCTGCTGGGCGCATACCAGCTGGCGTGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: WLRAMLANFRAT*AAGRIPAGVAG Trigger: ACCTGCCACGCCAGCTGGTATGCGCCCAGCAGCCAATGTGGCCCGAAAGTTTGCCAGCATCGCTCGTAACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 72 bp | GTCACTTTGCGCTCCCGGGCCGCCATCTGCCGCTTCTaGCGCACCTGGTTACGAGCGATGCTGGCAAACTTT | + |
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Preference number: 6 (lower is better) Translates to: VTLRSRAAICRF*RTWLRAMLANF Trigger: AAAGTTTGCCAGCATCGCTCGTAACCAGGTGCGCAAGAAGCGGCAGATGGCGGCCCGGGAGCGCAAAGTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 72 bp | AAGGCCAGCAGAATGGCAAAGATTGTCCGAGTCACTTaGCGCTCCCGGGCCGCCATCTGCCGCTTCTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: KASRMAKIVRVT*RSRAAICRFLR Trigger: GCGCAAGAAGCGGCAGATGGCGGCCCGGGAGCGCAAAGTGACTCGGACAATCTTTGCCATTCTGCTGGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS TCA 72 bp | GGGTGGCCGTTCCTTGGTGTTCTGGGTGGCACTGCCTaGGCTGGACTCATTGGAAGTGTCCTTGTCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: GWPFLGVLGGTA*AGLIGSVLVSH Trigger: GTGGCTGACAAGGACACTTCCAATGAGTCCAGCTCAGGCAGTGCCACCCAGAACACCAAGGAACGGCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 72 bp | AGGGGCCCAGAGTACAAAGGACAAGACCCAGGCGGCTaGAATCATGAGGCCTGCCATCTTAGTAGTGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: RGPEYKGQDPGG*NHEACHLSSAA Trigger: CGCCGCACTACTAAGATGGCAGGCCTCATGATTGCAGCCGCCTGGGTCTTGTCCTTTGTACTCTGGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | GCCGTTCCTTGGTGTTCTGGGTGGCACTGCCTGAGCTaGACTCATTGGAAGTGTCCTTGTCAGCCACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: AVPWCSGWHCLS*THWKCPCQPLG Trigger: GCCCAGTGGCTGACAAGGACACTTCCAATGAGTCCAGCTCAGGCAGTGCCACCCAGAACACCAAGGAACGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | GTGGACAGCTCTGTGGGTGGCCGTTCCTTGGTGTTCTaGGTGGCACTGCCTGAGCTGGACTCATTGGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: VDSSVGGRSLVF*VALPELDSLEV Trigger: CACTTCCAATGAGTCCAGCTCAGGCAGTGCCACCCAGAACACCAAGGAACGGCCACCCACAGAGCTGTCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 72 bp | GGCTTCATCAGAGGGCTCTTGAGGAAAGCCAGAGTCTaGGCCTTCTTCTCCTTGGGGCCCTCGGGTCGATGC | + |
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Preference number: 6 (lower is better) Translates to: GFIRGLLRKARV*AFFSLGPSGRC Trigger: GCATCGACCCGAGGGCCCCAAGGAGAAGAAGGCCAAGACTCTGGCTTTCCTCAAGAGCCCTCTGATGAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 72 bp | TTGGTGTTCTGGGTGGCACTGCCTGAGCTGGACTCATaGGAAGTGTCCTTGTCAGCCACTGGGCGTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LVFWVALPELDS*EVSLSATGRGG Trigger: GCCTCCACGCCCAGTGGCTGACAAGGACACTTCCAATGAGTCCAGCTCAGGCAGTGCCACCCAGAACACCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS TCA 72 bp | CCATCTCCACTGTCTCCAGGTGGTTGTGGGCTGTTGTaGCCAGGCGCACAGACTGATTGGCTGAGCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PSPLSPGGCGLL*PGAQTDWLSCH Trigger: ATGGCAGCTCAGCCAATCAGTCTGTGCGCCTGGTCACAACAGCCCACAACCACCTGGAGACAGTGGAGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 72 bp | CTGTGGGTGGCCGTTCCTTGGTGTTCTGGGTGGCACTaGCTGAGCTGGACTCATTGGAAGTGTCCTTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: LWVAVPWCSGWH*LSWTHWKCPCQ Trigger: CTGACAAGGACACTTCCAATGAGTCCAGCTCAGGCAGTGCCACCCAGAACACCAAGGAACGGCCACCCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 90 bp | CATTCACTGCCTGTCTGCTTTGTCACAATTTGGATCTTGGACCACTaGGAGGCTGGGTTGAGGGTTCGTGGCTGCAGGGTAGGAGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: HSLPVCFVTIWILDH*EAGLRVRGCRVGAG Trigger: GCCCGCTCCTACCCTGCAGCCACGAACCCTCAACCCAGCCTCCAAGTGGTCCAAGATCCAAATTGTGACAAAGCAGACAGGCAGTGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | AATCATGAGGCCTGCCATCTTAGTAGTGCGGCGGGCTaGATAGGTGAGGGGCTTGGTGACGCAGAAATAGCG | + |
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Preference number: 6 (lower is better) Translates to: NHEACHLSSAAG*IGEGLGDAEIA Trigger: CGCTATTTCTGCGTCACCAAGCCCCTCACCTATCCAGCCCGCCGCACTACTAAGATGGCAGGCCTCATGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | GCTGTGCCGAAGGTCACCGCCGGGTTGGACAAGAACTaGATGAAGCACTGGTTATCAGGCACTGTCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: AVPKVTAGLDKN*MKHWLSGTVLL Trigger: CAAGAGGACAGTGCCTGATAACCAGTGCTTCATCCAGTTCTTGTCCAACCCGGCGGTGACCTTCGGCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | CTTTGTCACAATTTGGATCTTGGACCACTTGGAGGCTaGGTTGAGGGTTCGTGGCTGCAGGGTAGGAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: LCHNLDLGPLGG*VEGSWLQGRSG Trigger: CCCGCTCCTACCCTGCAGCCACGAACCCTCAACCCAGCCTCCAAGTGGTCCAAGATCCAAATTGTGACAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | GGCGCATACCAGCTGGCGTGGCAGGTACGATCTCGATaGCAGTCACACATTCACTGCCTGTCTGCTTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: GAYQLAWQVRSR*QSHIHCLSALS Trigger: TGACAAAGCAGACAGGCAGTGAATGTGTGACTGCCATCGAGATCGTACCTGCCACGCCAGCTGGTATGCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS TCA 72 bp | AGGTGGTTGTGGGCTGTTGTGACCAGGCGCACAGACTaGTTGGCTGAGCTGCCATTGACAGGTGTGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: RWLWAVVTRRTD*LAELPLTGVKF Trigger: GAACTTCACACCTGTCAATGGCAGCTCAGCCAATCAGTCTGTGCGCCTGGTCACAACAGCCCACAACCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | GTCACCGCCGGGTTGGACAAGAACTGGATGAAGCACTaGTTATCAGGCACTGTCCTCTTGCCCACCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: VTAGLDKNWMKH*LSGTVLLPTTN Trigger: GTTTGTGGTGGGCAAGAGGACAGTGCCTGATAACCAGTGCTTCATCCAGTTCTTGTCCAACCCGGCGGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 72 bp | CCTGTCTGCTTTGTCACAATTTGGATCTTGGACCACTaGGAGGCTGGGTTGAGGGTTCGTGGCTGCAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: PVCFVTIWILDH*EAGLRVRGCRV Trigger: TACCCTGCAGCCACGAACCCTCAACCCAGCCTCCAAGTGGTCCAAGATCCAAATTGTGACAAAGCAGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 90 bp | GCAGTCACACATTCACTGCCTGTCTGCTTTGTCACAATTTGGATCTaGGACCACTTGGAGGCTGGGTTGAGGGTTCGTGGCTGCAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: AVTHSLPVCFVTIWI*DHLEAGLRVRGCRV Trigger: TACCCTGCAGCCACGAACCCTCAACCCAGCCTCCAAGTGGTCCAAGATCCAAATTGTGACAAAGCAGACAGGCAGTGAATGTGTGACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 90 bp | CTCGATGGCAGTCACACATTCACTGCCTGTCTGCTTTGTCACAATTaGGATCTTGGACCACTTGGAGGCTGGGTTGAGGGTTCGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LDGSHTFTACLLCHN*DLGPLGGWVEGSWL Trigger: CAGCCACGAACCCTCAACCCAGCCTCCAAGTGGTCCAAGATCCAAATTGTGACAAAGCAGACAGGCAGTGAATGTGTGACTGCCATCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 72 bp | CATTCACTGCCTGTCTGCTTTGTCACAATTTGGATCTaGGACCACTTGGAGGCTGGGTTGAGGGTTCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: HSLPVCFVTIWI*DHLEAGLRVRG Trigger: GCCACGAACCCTCAACCCAGCCTCCAAGTGGTCCAAGATCCAAATTGTGACAAAGCAGACAGGCAGTGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 72 bp | GGAGGTTTCTTAATGCTCGGCTTCATCAGAGGGCTCTaGAGGAAAGCCAGAGTCTTGGCCTTCTTCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GGFLMLGFIRGL*RKARVLAFFSL Trigger: CAAGGAGAAGAAGGCCAAGACTCTGGCTTTCCTCAAGAGCCCTCTGATGAAGCCGAGCATTAAGAAACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS GCA 72 bp | TGGCAGGTACGATCTCGATGGCAGTCACACATTCACTaGCTGTCTGCTTTGTCACAATTTGGATCTTGGACC | + |
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Preference number: 6 (lower is better) Translates to: WQVRSRWQSHIH*LSALSQFGSWT Trigger: GGTCCAAGATCCAAATTGTGACAAAGCAGACAGGCAGTGAATGTGTGACTGCCATCGAGATCGTACCTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CCA 72 bp | GTCACACATTCACTGCCTGTCTGCTTTGTCACAATTTaGATCTTGGACCACTTGGAGGCTGGGTTGAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: VTHSLPVCFVTI*ILDHLEAGLRV Trigger: AACCCTCAACCCAGCCTCCAAGTGGTCCAAGATCCAAATTGTGACAAAGCAGACAGGCAGTGAATGTGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 72 bp | AGTCACACATTCACTGCCTGTCTGCTTTGTCACAATTaGGATCTTGGACCACTTGGAGGCTGGGTTGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: SHTFTACLLCHN*DLGPLGGWVEG Trigger: ACCCTCAACCCAGCCTCCAAGTGGTCCAAGATCCAAATTGTGACAAAGCAGACAGGCAGTGAATGTGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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| CDS CAA 72 bp | TCTCGATGGCAGTCACACATTCACTGCCTGTCTGCTTaGTCACAATTTGGATCTTGGACCACTTGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SRWQSHIHCLSA*SQFGSWTTWRL Trigger: CAGCCTCCAAGTGGTCCAAGATCCAAATTGTGACAAAGCAGACAGGCAGTGAATGTGTGACTGCCATCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045537.4 |
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