Pregenerated sensors for CHRM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046159Ensembl transcript IDs: ENSMUST00000063093.10, ENSMUST00000187510.7
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCATCAGGAATGGCCTCCCACCTGCGCCAGACTCCTGCTAGGCTGTaGGCTGACGTGTGTGTATGGGTCACTGCTATTGATAAACCCCTT | + |
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Preference number: 1 (lower is better) Translates to: PSGMASHLRQTPARL*ADVCVWVTAIDKPL Trigger: AAGGGGTTTATCAATAGCAGTGACCCATACACACACGTCAGCCCACAGCCTAGCAGGAGTCTGGCGCAGGTGGGAGGCCATTCCTGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR CCA 90 bp | TCTCCCTCAAGACTGTCCATCCAGCACAGGTTTGCTGAGAAGGCCTaGCTTCTCTGTGCTGGATATTCTTCTTCAGGGCGGTTTCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: SPSRLSIQHRFAEKA*LLCAGYSSSGRFLE Trigger: TTCCAGAAACCGCCCTGAAGAAGAATATCCAGCACAGAGAAGCCAGGCCTTCTCAGCAAACCTGTGCTGGATGGACAGTCTTGAGGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR TCA 90 bp | ACACACCCACTGATGTCAAAGTTGGCTGTAAACACCACCTCACACTaGATACAAAAGCAGCTTTGGCCCCAGCTCTGGGTTCACAACACA | + |
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Preference number: 1 (lower is better) Translates to: THPLMSKLAVNTTSH*IQKQLWPQLWVHNT Trigger: TGTGTTGTGAACCCAGAGCTGGGGCCAAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGCCAACTTTGACATCAGTGGGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR TCA 90 bp | GGACACTTTAGGACCCCTAGGGAGAACACATGGCAACCAGCACATTaGGGCTCACCAGTGATTCCAGAGCTAATAAGAATTAAAAGACCC | + |
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Preference number: 1 (lower is better) Translates to: GHFRTPRENTWQPAH*GSPVIPELIRIKRP Trigger: GGGTCTTTTAATTCTTATTAGCTCTGGAATCACTGGTGAGCCTCAATGTGCTGGTTGCCATGTGTTCTCCCTAGGGGTCCTAAAGTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR GCA 90 bp | ACCGAGGGAGGACAGAAGCTGATCGGGGACAAGTGGTGTCAGCTTTaGAATATACAAAATAACTCAGAACCACAGATACTTCAAGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: TEGGQKLIGDKWCQL*NIQNNSEPQILQAC Trigger: GCAGGCTTGAAGTATCTGTGGTTCTGAGTTATTTTGTATATTGCAAAGCTGACACCACTTGTCCCCGATCAGCTTCTGTCCTCCCTCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR CCA 90 bp | TGCACAAAACAGTACTTTGCAAGAACCAAGAGTCAAATCCACGAATaGAGTTTAACAGCACACCGAGGGAGGACAGAAGCTGATCGGGGA | + |
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Preference number: 1 (lower is better) Translates to: CTKQYFARTKSQIHE*SLTAHRGRTEADRG Trigger: TCCCCGATCAGCTTCTGTCCTCCCTCGGTGTGCTGTTAAACTCCATTCGTGGATTTGACTCTTGGTTCTTGCAAAGTACTGTTTTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR GCA 90 bp | CTTTGCAATATACAAAATAACTCAGAACCACAGATACTTCAAGCCTaGCGTGCTTCACGTGGGATCTGGGTGGACACTTTAGGACCCCTA | + |
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Preference number: 1 (lower is better) Translates to: LCNIQNNSEPQILQA*RASRGIWVDTLGPL Trigger: TAGGGGTCCTAAAGTGTCCACCCAGATCCCACGTGAAGCACGGCAGGCTTGAAGTATCTGTGGTTCTGAGTTATTTTGTATATTGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR GCA 90 bp | CCTGCCAGTTCCCTGTTCTCCATCACGTTATATACACAATGTGCGTaGGTGCGGAACTCACACAGATATAGGTATGCAGGTATTCATGTA | + |
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Preference number: 1 (lower is better) Translates to: PASSLFSITLYTQCA*VRNSHRYRYAGIHV Trigger: TACATGAATACCTGCATACCTATATCTGTGTGAGTTCCGCACGCACGCACATTGTGTATATAACGTGATGGAGAACAGGGAACTGGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR TCA 90 bp | AATCCACGAATGGAGTTTAACAGCACACCGAGGGAGGACAGAAGCTaGTCGGGGACAAGTGGTGTCAGCTTTGCAATATACAAAATAACT | + |
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Preference number: 1 (lower is better) Translates to: NPRMEFNSTPREDRS*SGTSGVSFAIYKIT Trigger: AGTTATTTTGTATATTGCAAAGCTGACACCACTTGTCCCCGATCAGCTTCTGTCCTCCCTCGGTGTGCTGTTAAACTCCATTCGTGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR TCA 90 bp | CCAAAACACAACATTAAACTGGGCTTATTTCAGGTTCATGTTGCTTaGGGATCCTATGCACTGAAAGCATCCGCGGTAGGAACATCCTGC | + |
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Preference number: 1 (lower is better) Translates to: PKHNIKLGLFQVHVA*GSYALKASAVGTSC Trigger: GCAGGATGTTCCTACCGCGGATGCTTTCAGTGCATAGGATCCTCAAGCAACATGAACCTGAAATAAGCCCAGTTTAATGTTGTGTTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR GCA 90 bp | CCAGTTCCCTGTTCTCCATCACGTTATATACACAATGTGCGTGCGTaGGGAACTCACACAGATATAGGTATGCAGGTATTCATGTACAAT | + |
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Preference number: 1 (lower is better) Translates to: PVPCSPSRYIHNVRA*GTHTDIGMQVFMYN Trigger: ATTGTACATGAATACCTGCATACCTATATCTGTGTGAGTTCCGCACGCACGCACATTGTGTATATAACGTGATGGAGAACAGGGAACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGAATGAGAGCAGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGAGCCAGCACAGGTTTGCTaGGAAGGCCTGGCTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QENESSRPLPQREHGALEPAQVC*EGLASL Trigger: CAGAGAAGCCAGGCCTTCTCAGCAAACCTGTGCTGG...CTCAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCTGCTCTCATTCTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR CCA 90 bp | GGTCCAGTCAAGACGAGGTGCCGACTGACTGACTCTCCCTCAAGACTGTCCATCTATCACCATCAGGAATaGCCTCCCACCTGCGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GPVKTRCRLTDSPSRLSIYHHQE*PPTCAR Trigger: TCTGGCGCAGGTGGGAGGCCATTCCTGATGGTGATA...GATGGACAGTCTTGAGGGAGAGTCAGTCAGTCGGCACCTCGTCTTGACTGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGACTGTCCATCCAGCACAGGTTTGCTGAGAAGGCCTGGCTTCTCTGTGCTGACTCCTGCTAGGCTGTaGGCTGACGTGTGTGTATGG | + |
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Preference number: 2 (lower is better) Translates to: QDCPSSTGLLRRPGFSVLTPARL*ADVCVW Trigger: CCATACACACACGTCAGCCCACAGCCTAGCAGGAGT...CAGCACAGAGAAGCCAGGCCTTCTCAGCAAACCTGTGCTGGATGGACAGTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGAATGAGAGCAGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGAGGAGCTCGGAGGGACCTaGTTTAGCTCTATCAACAGA | + |
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Preference number: 2 (lower is better) Translates to: QENESSRPLPQREHGALEELGGT*FSSINR Trigger: TCTGTTGATAGAGCTAAACCAGGTCCCTCCGAGCTC...CTCAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCTGCTCTCATTCTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR GCA 90 bp | CTTATTTCAGGTTCATGTTGCTTGAGGATCCTATGCACTGAAAGCATCCGCGGTGAATGGCCTCCCACCTaGGCCAGACTCCTGCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: LISGSCCLRILCTESIRGEWPPT*ARLLLG Trigger: GCCTAGCAGGAGTCTGGCGCAGGTGGGAGGCCATTC...ACCGCGGATGCTTTCAGTGCATAGGATCCTCAAGCAACATGAACCTGAAATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR GCA 90 bp | GGTCCAGTCAAGACGAGGTGCCGACTGACTGACTCTCCCTCAAGACTGTCCATCCACAATGTGCGTGCGTaGGGAACTCACACAGATATA | + |
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Preference number: 2 (lower is better) Translates to: GPVKTRCRLTDSPSRLSIHNVRA*GTHTDI Trigger: TATATCTGTGTGAGTTCCGCACGCACGCACATTGTG...GATGGACAGTCTTGAGGGAGAGTCAGTCAGTCGGCACCTCGTCTTGACTGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGAGAATGAGAGCAGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGAGTCAAATCCACGAATaGAGTTTAACAGCACACCGA | + |
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Preference number: 2 (lower is better) Translates to: ARRMRAAGPSPRENMVHLSQIHE*SLTAHR Trigger: TCGGTGTGCTGTTAAACTCCATTCGTGGATTTGACT...CAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCTGCTCTCATTCTCCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR CCA 90 bp | AGGTGCCGACTGACTGACTCTCCCTCAAGACTGTCCATCCAGCACAGGTTTGCTCTGGCTTCTCTGTGCTaGATATTCTTCTTCAGGGCG | + |
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Preference number: 2 (lower is better) Translates to: RCRLTDSPSRLSIQHRFALASLC*IFFFRA Trigger: CGCCCTGAAGAAGAATATCCAGCACAGAGAAGCCAG...AGCAAACCTGTGCTGGATGGACAGTCTTGAGGGAGAGTCAGTCAGTCGGCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR TCA 90 bp | GGTCCAGTCAAGACGAGGTGCCGACTGACTGACTCTCCCTCAAGACTGTCCATCCAGGTTCATGTTGCTTaGGGATCCTATGCACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: GPVKTRCRLTDSPSRLSIQVHVA*GSYALK Trigger: TTTCAGTGCATAGGATCCTCAAGCAACATGAACCTG...GATGGACAGTCTTGAGGGAGAGTCAGTCAGTCGGCACCTCGTCTTGACTGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGACTGTCCATCCAGCACAGGTTTGCTGAGAAGGCCTGGCTTCTCTGTGCTGCTTCAGGGCGGTTTCTaGAAAATAGTTCCAGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: QDCPSSTGLLRRPGFSVLLQGGF*KIVPVS Trigger: TGACACTGGAACTATTTTCCAGAAACCGCCCTGAAG...CAGCACAGAGAAGCCAGGCCTTCTCAGCAAACCTGTGCTGGATGGACAGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR CAA 90 bp | AAAGTTGGCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTaGGCCCCAGCTCTGGGTTCACAACACAGATGGATGCCCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: KVGCKHHLTLNTKAA*APALGSQHRWMPCT Trigger: TGTGCAGGGCATCCATCTGTGTTGTGAACCCAGAGCTGGGGCCAAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGCCAACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR GCA 90 bp | GCCAGGAGAATGAGAGCAGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGCACAAAACAGTACTTTaGAAGAACCAAGAGTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: ARRMRAAGPSPRENMVHLHKTVL*KNQESN Trigger: ATTTGACTCTTGGTTCTTGCAAAGTACTGTTTTGTG...CAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCTGCTCTCATTCTCCTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR CCA 90 bp | GGTCCAGTCAAGACGAGGTGCCGACTGACTGACTCTCCCTCAAGACTGTCCATCCTGCTGAATTGGCATTaGACCAAAATCAGGTATTCA | + |
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Preference number: 2 (lower is better) Translates to: GPVKTRCRLTDSPSRLSILLNWH*TKIRYS Trigger: TGAATACCTGATTTTGGTCCAATGCCAATTCAGCAG...GATGGACAGTCTTGAGGGAGAGTCAGTCAGTCGGCACCTCGTCTTGACTGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTACAGACACACCACTGAGAACACACCCACTGATGTCAAAGTTGGCTGTAGGCCTGGCTTCTCTGTaGTGGATATTCTTCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SGTDTPLRTHPLMSKLAVGLASL*WIFFFR Trigger: CCTGAAGAAGAATATCCAGCACAGAGAAGCCAGGCC...TACAGCCAACTTTGACATCAGTGGGTGTGTTCTCAGTGGTGTGTCTGTACCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGAATGAGAGCAGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGAGAACACAACATTAAACTaGGCTTATTTCAGGTTCATG | + |
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Preference number: 2 (lower is better) Translates to: QENESSRPLPQREHGALENTTLN*AYFRFM Trigger: CATGAACCTGAAATAAGCCCAGTTTAATGTTGTGTT...CTCAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCTGCTCTCATTCTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTACAGACACACCACTGAGAACACACCCACTGATGTCAAAGTTGGCTGTAATAGGAGGTAAGCCCTaGTTCCTTTCAAAAGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SGTDTPLRTHPLMSKLAVIGGKP*FLSKGA Trigger: GGCACCTTTTGAAAGGAAGCAGGGCTTACCTCCTAT...TACAGCCAACTTTGACATCAGTGGGTGTGTTCTCAGTGGTGTGTCTGTACCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTACAGACACACCACTGAGAACACACCCACTGATGTCAAAGTTGGCTGTACCAGGTGGCTGGAAGTaGAATACAATACTTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: SGTDTPLRTHPLMSKLAVPGGWK*NTILSV Trigger: GACAGAAAGTATTGTATTTCACTTCCAGCCACCTGG...TACAGCCAACTTTGACATCAGTGGGTGTGTTCTCAGTGGTGTGTCTGTACCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR TCA 90 bp | CTTATTTCAGGTTCATGTTGCTTGAGGATCCTATGCACTGAAAGCATCCGCGGTCTCCTTCTTTCCTGCTaGATTGGCATTGGACCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LISGSCCLRILCTESIRGLLLSC*IGIGPK Trigger: TTTTGGTCCAATGCCAATTCAGCAGGAAAGAAGGAG...ACCGCGGATGCTTTCAGTGCATAGGATCCTCAAGCAACATGAACCTGAAATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTACAGACACACCACTGAGAACACACCCACTGATGTCAAAGTTGGCTGTAAGAACATGGTGCACTTaGGGCAATTCAAAGGATGAT | + |
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Preference number: 2 (lower is better) Translates to: SGTDTPLRTHPLMSKLAVRTWCT*GNSKDD Trigger: ATCATCCTTTGAATTGCCTCAAGTGCACCATGTTCT...TACAGCCAACTTTGACATCAGTGGGTGTGTTCTCAGTGGTGTGTCTGTACCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR GCA 90 bp | TATTCTTCTTCAGGGCGGTTTCTGGAAAATAGTTCCAGTGTCAAAAACCCAAACTATACACAATGTGCGTaGGTGCGGAACTCACACAGA | + |
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Preference number: 2 (lower is better) Translates to: YSSSGRFLENSSSVKNPNYTQCA*VRNSHR Trigger: TCTGTGTGAGTTCCGCACGCACGCACATTGTGTATA...GTTTGGGTTTTTGACACTGGAACTATTTTCCAGAAACCGCCCTGAAGAAGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR CCA 90 bp | GGTGCACTTGAGGCAATTCAAAGGATGATGCAAAATTCAGTTGTCACAATGGAATCAAAAGGTGCCAGGTaGCTGGAAGTGAAATACAAT | + |
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Preference number: 2 (lower is better) Translates to: GALEAIQRMMQNSVVTMESKGAR*LEVKYN Trigger: ATTGTATTTCACTTCCAGCCACCTGGCACCTTTTGA...TTCCATTGTGACAACTGAATTTTGCATCATCCTTTGAATTGCCTCAAGTGCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR CAA 90 bp | TTAAATTTAGCAGTACACTTCTCCTTCTTTCCTGCTGAATTGGCATaGGACCAAAATCAGGTATTCAGTGGATCAGTAAATAGGCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: LNLAVHFSFFPAELA*DQNQVFSGSVNRQL Trigger: AAGCTGCCTATTTACTGATCCACTGAATACCTGATTTTGGTCCAATGCCAATTCAGCAGGAAAGAAGGAGAAGTGTACTGCTAAATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR TCA 90 bp | GGTGCACTTGAGGCAATTCAAAGGATGATGCAAAATTCAGTTGTCACAATGGAAATCTATTGCTGTATGTaGCATTCAAAGGTGACTCTA | + |
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Preference number: 2 (lower is better) Translates to: GALEAIQRMMQNSVVTMEIYCCM*HSKVTL Trigger: TAGAGTCACCTTTGAATGTCACATACAGCAATAGAT...TTCCATTGTGACAACTGAATTTTGCATCATCCTTTGAATTGCCTCAAGTGCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR CCA 72 bp | ATGGCCTCCCACCTGCGCCAGACTCCTGCTAGGCTGTaGGCTGACGTGTGTGTATGGGTCACTGCTATTGAT | + |
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Preference number: 3 (lower is better) Translates to: MASHLRQTPARL*ADVCVWVTAID Trigger: ATCAATAGCAGTGACCCATACACACACGTCAGCCCACAGCCTAGCAGGAGTCTGGCGCAGGTGGGAGGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR TCA 72 bp | AGTATGTACGGGGTCCAGTCAAGACGAGGTGCCGACTaGCTGACTCTCCCTCAAGACTGTCCATCCAGCACA | + |
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Preference number: 3 (lower is better) Translates to: SMYGVQSRRGAD*LTLPQDCPSST Trigger: TGTGCTGGATGGACAGTCTTGAGGGAGAGTCAGTCAGTCGGCACCTCGTCTTGACTGGACCCCGTACATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR GCA 72 bp | AGGAGACAGTATGTACGGGGTCCAGTCAAGACGAGGTaGCGACTGACTGACTCTCCCTCAAGACTGTCCATC | + |
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Preference number: 3 (lower is better) Translates to: RRQYVRGPVKTR*RLTDSPSRLSI Trigger: GATGGACAGTCTTGAGGGAGAGTCAGTCAGTCGGCACCTCGTCTTGACTGGACCCCGTACATACTGTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR CCA 72 bp | AGAACCACAGATACTTCAAGCCTGCCGTGCTTCACGTaGGATCTGGGTGGACACTTTAGGACCCCTAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: RTTDTSSLPCFT*DLGGHFRTPRE Trigger: CTCCCTAGGGGTCCTAAAGTGTCCACCCAGATCCCACGTGAAGCACGGCAGGCTTGAAGTATCTGTGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGAGAATGAGAGCAGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGTCAGGTTCATGTTGCTaGAGGATCCTATGCACTGAA | + |
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Preference number: 3 (lower is better) Translates to: ARRMRAAGPSPRENMVHLSGSCC*RILCTE Trigger: TTCAGTGCATAGGATCCTCAAGCAACATGAACCTGA...CAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCTGCTCTCATTCTCCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR CCA 72 bp | AGACTGTCCATCCAGCACAGGTTTGCTGAGAAGGCCTaGCTTCTCTGTGCTGGATATTCTTCTTCAGGGCGG | + |
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Preference number: 3 (lower is better) Translates to: RLSIQHRFAEKA*LLCAGYSSSGR Trigger: CCGCCCTGAAGAAGAATATCCAGCACAGAGAAGCCAGGCCTTCTCAGCAAACCTGTGCTGGATGGACAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR TCA 72 bp | CTCTCCCTCAAGACTGTCCATCCAGCACAGGTTTGCTaGGAAGGCCTGGCTTCTCTGTGCTGGATATTCTTC | + |
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Preference number: 3 (lower is better) Translates to: LSLKTVHPAQVC*EGLASLCWIFF Trigger: GAAGAATATCCAGCACAGAGAAGCCAGGCCTTCTCAGCAAACCTGTGCTGGATGGACAGTCTTGAGGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR-3UTR CAA 90 bp | CAAGACTGTCCATCCAGCACAGGTTTGCTGAGAAGGCCTGGCTTCTCTGTGCTGCCTGCTGAATTGGCATaGGACCAAAATCAGGTATTC | + |
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Preference number: 3 (lower is better) Translates to: QDCPSSTGLLRRPGFSVLPAELA*DQNQVF Trigger: GAATACCTGATTTTGGTCCAATGCCAATTCAGCAGG...CAGCACAGAGAAGCCAGGCCTTCTCAGCAAACCTGTGCTGGATGGACAGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR TCA 72 bp | ATGGAGTTTAACAGCACACCGAGGGAGGACAGAAGCTaGTCGGGGACAAGTGGTGTCAGCTTTGCAATATAC | + |
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Preference number: 3 (lower is better) Translates to: MEFNSTPREDRS*SGTSGVSFAIY Trigger: GTATATTGCAAAGCTGACACCACTTGTCCCCGATCAGCTTCTGTCCTCCCTCGGTGTGCTGTTAAACTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR CCA 72 bp | CGTACAGAAGTCCATCCTTTTGAGCTCGGAGGGACCTaGTTTAGCTCTATCAACAGAGCTAACAGCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: RTEVHPFELGGT*FSSINRANSTG Trigger: TCCTGTGCTGTTAGCTCTGTTGATAGAGCTAAACCAGGTCCCTCCGAGCTCAAAAGGATGGACTTCTGTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR TCA 72 bp | AGGACCCCTAGGGAGAACACATGGCAACCAGCACATTaGGGCTCACCAGTGATTCCAGAGCTAATAAGAATT | + |
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Preference number: 3 (lower is better) Translates to: RTPRENTWQPAH*GSPVIPELIRI Trigger: AATTCTTATTAGCTCTGGAATCACTGGTGAGCCTCAATGTGCTGGTTGCCATGTGTTCTCCCTAGGGGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR GCA 72 bp | TCCTATGCACTGAAAGCATCCGCGGTAGGAACATCCTaGCAGTTCCCTGTTCTCCATCACGTTATATACACA | + |
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Preference number: 3 (lower is better) Translates to: SYALKASAVGTS*QFPVLHHVIYT Trigger: TGTGTATATAACGTGATGGAGAACAGGGAACTGGCAGGATGTTCCTACCGCGGATGCTTTCAGTGCATAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR GCA 72 bp | TCCCTGTTCTCCATCACGTTATATACACAATGTGCGTaGGTGCGGAACTCACACAGATATAGGTATGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: SLFSITLYTQCA*VRNSHRYRYAG Trigger: ACCTGCATACCTATATCTGTGTGAGTTCCGCACGCACGCACATTGTGTATATAACGTGATGGAGAACAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
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| 3UTR CCA 72 bp | CACACCGAGGGAGGACAGAAGCTGATCGGGGACAAGTaGTGTCAGCTTTGCAATATACAAAATAACTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HTEGGQKLIGDK*CQLCNIQNNSE Trigger: TTCTGAGTTATTTTGTATATTGCAAAGCTGACACCACTTGTCCCCGATCAGCTTCTGTCCTCCCTCGGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| 3UTR CCA 72 bp | CAGTACTTTGCAAGAACCAAGAGTCAAATCCACGAATaGAGTTTAACAGCACACCGAGGGAGGACAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QYFARTKSQIHE*SLTAHRGRTEA Trigger: AGCTTCTGTCCTCCCTCGGTGTGCTGTTAAACTCCATTCGTGGATTTGACTCTTGGTTCTTGCAAAGTACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGTACAGACACACCACTGAGAACACACCCACTGATGTCAAAGTTGGCTGTATATTTCAGGTTCATGTaGCTTGAGGATCCTATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SGTDTPLRTHPLMSKLAVYFRFM*LEDPMH Trigger: GTGCATAGGATCCTCAAGCAACATGAACCTGAAATA...TACAGCCAACTTTGACATCAGTGGGTGTGTTCTCAGTGGTGTGTCTGTACCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| 3UTR GCA 72 bp | ATACAAAATAACTCAGAACCACAGATACTTCAAGCCTaGCGTGCTTCACGTGGGATCTGGGTGGACACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: IQNNSEPQILQA*RASRGIWVDTL Trigger: TAAAGTGTCCACCCAGATCCCACGTGAAGCACGGCAGGCTTGAAGTATCTGTGGTTCTGAGTTATTTTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| 3UTR TCA 72 bp | AACATTAAACTGGGCTTATTTCAGGTTCATGTTGCTTaGGGATCCTATGCACTGAAAGCATCCGCGGTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NIKLGLFQVHVA*GSYALKASAVG Trigger: TCCTACCGCGGATGCTTTCAGTGCATAGGATCCTCAAGCAACATGAACCTGAAATAAGCCCAGTTTAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTGACTCTAGGATTGAGTTTCGAGCAGTTTAGATCCCAGAAATTTTGTTTGTTCTTTCCTGCTGAATaGGCATTGGACCAAAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: KVTLGLSFEQFRSQKFCLFFPAE*ALDQNQ Trigger: CTGATTTTGGTCCAATGCCAATTCAGCAGGAAAGAA...CAAACAAAATTTCTGGGATCTAAACTGCTCGAAACTCAATCCTAGAGTCACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTTCTTCAGGGCGGTTTCTGGAAAATAGTTCCAGTGTCAAAAACCCAAACGCACAAAACAGTACTTaGCAAGAACCAAGAGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: YSSSGRFLENSSSVKNPNAQNST*QEPRVK Trigger: TTTGACTCTTGGTTCTTGCAAAGTACTGTTTTGTGC...GTTTGGGTTTTTGACACTGGAACTATTTTCCAGAAACCGCCCTGAAGAAGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| 3UTR TCA 72 bp | AGAGAGAACATGGTGCACTTGAGGCAATTCAAAGGATaGTGCAAAATTCAGTTGTCACAATGGAAAGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: RENMVHLRQFKG*CKIQLSQWKEL Trigger: GAGTTCTTTCCATTGTGACAACTGAATTTTGCATCATCCTTTGAATTGCCTCAAGTGCACCATGTTCTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR TCA 90 bp | CTTATTTCAGGTTCATGTTGCTTGAGGATCCTATGCACTGAAAGCATCCGCGGTGGGCAGCCCCGCCTCTaGGGGACTGTGCACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LISGSCCLRILCTESIRGGQPRL*GTVHPG Trigger: TCCTGGGTGCACAGTCCCTCAGAGGCGGGGCTGCCC...ACCGCGGATGCTTTCAGTGCATAGGATCCTCAAGCAACATGAACCTGAAATAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR TCA 90 bp | CACCTGCGCCAGACTCCTGCTAGGCTGTGGGCTGACGTGTGTGTATGGGTCACTTTCCGCTTGGTGATCTaGCTTCTGGTCTTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLRQTPARLWADVCVWVTFRLVI*LLVLRA Trigger: TGCTCTCAAGACCAGAAGTCAGATCACCAAGCGGAA...AGTGACCCATACACACACGTCAGCCCACAGCCTAGCAGGAGTCTGGCGCAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR GCA 90 bp | CAGGAGAATGAGAGCAGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGAGATGACGGACTGTCTCTaGTGGTACTGCTGTTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QENESSRPLPQREHGALEMTDCL*WYCCLR Trigger: GCGCAAACAGCAGTACCAGCAGAGACAGTCCGTCAT...CTCAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCTGCTCTCATTCTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | GCCAGGAGAATGAGAGCAGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGACTGGATGGGGAGCTTaGAGAAGTCCTTCTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARRMRAAGPSPRENMVHLTGWGA*RSPSDS Trigger: ACTGTCAGAAGGACTTCTCCAAGCTCCCCATCCAGT...CAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCTGCTCTCATTCTCCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR TCA 90 bp | GCCAGGAGAATGAGAGCAGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGCAGTCAAGAATGCAATaGAGACCACTTGCCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ARRMRAAGPSPRENMVHLQSRMQ*RPLARW Trigger: CCATCTGGCAAGTGGTCTTCATTGCATTCTTGACTG...CAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCTGCTCTCATTCTCCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR GCA 90 bp | CACCTGCGCCAGACTCCTGCTAGGCTGTGGGCTGACGTGTGTGTATGGGTCACTGATGATGGTCACCAATaGCAGGAAGCCAGTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLRQTPARLWADVCVWVTDDGHQ*QEASQE Trigger: TTCTTGACTGGCTTCCTGGCATTGGTGACCATCATC...AGTGACCCATACACACACGTCAGCCCACAGCCTAGCAGGAGTCTGGCGCAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR GCA 90 bp | AGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGAGGCAATTCAAAGGATGTGGTCTTGGTCCATCTaGTCAGCACTGGGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRPLPQREHGALEAIQRMWSWSI*SALGFQ Trigger: CTGGAAGCCCAGTGCTGAGCAGATGGACCAAGACCA...CATCCTTTGAATTGCCTCAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR GCA 90 bp | CAAGACTGTCCATCCAGCACAGGTTTGCTGAGAAGGCCTGGCTTCTCTGTGCTGTGTCTCTGCTGGTACTaGTGTTTGCGCCGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QDCPSSTGLLRRPGFSVLCLCWY*CLRRFL Trigger: GAGGAAGCGGCGCAAACAGCAGTACCAGCAGAGACA...CAGCACAGAGAAGCCAGGCCTTCTCAGCAAACCTGTGCTGGATGGACAGTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTCAAGACGAGGTGCCGACTGACTGACTCTCCCTCAAGACTGTCCATCCTGCTACTGTGGTCTTaGTCCATCTGCTCAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GPVKTRCRLTDSPSRLSILLLWS*SICSAL Trigger: CAGTGCTGAGCAGATGGACCAAGACCACAGTAGCAG...GATGGACAGTCTTGAGGGAGAGTCAGTCAGTCGGCACCTCGTCTTGACTGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGTCAAGACGAGGTGCCGACTGACTGACTCTCCCTCAAGACTGTCCATCACGGCAGACTCTAACTaGATGGGGAGCTTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPVKTRCRLTDSPSRLSITADSN*MGSLEK Trigger: CTTCTCCAAGCTCCCCATCCAGTTAGAGTCTGCCGT...GATGGACAGTCTTGAGGGAGAGTCAGTCAGTCGGCACCTCGTCTTGACTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR TCA 90 bp | CAGGAGAATGAGAGCAGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGAGACTGGAGGTGTCATTTaGGGAGAAATTCCCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QENESSRPLPQREHGALETGGVI*GEIPRG Trigger: ACCTCTGGGAATTTCTCCTCAAATGACACCTCCAGT...CTCAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCTGCTCTCATTCTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | GCCAGACTCCTGCTAGGCTGTGGGCTGACGTGTGTGTATGGGTCACTGCTATTGGAACTGCCTGTGGGGTaGACAAAGTTTTCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARLLLGCGLTCVYGSLLLELPVG*TKFSAS Trigger: GGAAGCAGAAAACTTTGTCCACCCCACAGGCAGTTC...CAATAGCAGTGACCCATACACACACGTCAGCCCACAGCCTAGCAGGAGTCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | ACTTTAGGACCCCTAGGGAGAACACATGGCAACCAGCACATTGAGGCTCACCAGTGGTGTCAGAGGTCTTaGCTGTGTCCACGGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: TLGPLGRTHGNQHIEAHQWCQRS*LCPRQT Trigger: AGTCTGCCGTGGACACAGCCAAGACCTCTGACACCA...CTGGTGAGCCTCAATGTGCTGGTTGCCATGTGTTCTCCCTAGGGGTCCTAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR TCA 90 bp | ACTTTAGGACCCCTAGGGAGAACACATGGCAACCAGCACATTGAGGCTCACCAGCAAGGATGTTGCCGATaGTGGTCACCAATGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLGPLGRTHGNQHIEAHQQGCCR*WSPMPG Trigger: TCCTGGCATTGGTGACCATCATCGGCAACATCCTTG...CTGGTGAGCCTCAATGTGCTGGTTGCCATGTGTTCTCCCTAGGGGTCCTAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGAGGCAATTCAAAGGATGGTTGTGAACCAGAAGTaGCAGCCACCATACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRPLPQREHGALEAIQRMVVNQK*QPPYFL Trigger: GAGGAAGTATGGTGGCTGTCACTTCTGGTTCACAAC...CATCCTTTGAATTGCCTCAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| 3UTR CAA 72 bp | CTGACTCTCCCTCAAGACTGTCCATCCAGCACAGGTTaGCTGAGAAGGCCTGGCTTCTCTGTGCTGGATATT | + |
|
Preference number: 4 (lower is better) Translates to: LTLPQDCPSSTG*LRRPGFSVLDI Trigger: AATATCCAGCACAGAGAAGCCAGGCCTTCTCAGCAAACCTGTGCTGGATGGACAGTCTTGAGGGAGAGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR TCA 90 bp | TCAGGTACAGACACACCACTGAGAACACACCCACTGATGTCAAAGTTGGCTGTACCAGCGTGGCTTCTTTaGAGGACAGAGGTAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTDTPLRTHPLMSKLAVPAWLL*RTEVER Trigger: CCGCTCTACCTCTGTCCTTCAAAGAAGCCACGCTGG...TACAGCCAACTTTGACATCAGTGGGTGTGTTCTCAGTGGTGTGTCTGTACCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR GCA 90 bp | TCAGGTACAGACACACCACTGAGAACACACCCACTGATGTCAAAGTTGGCTGTAGCCTCTGAGGGACTGTaGACCCAGGAAGAGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SGTDTPLRTHPLMSKLAVASEGL*TQEELM Trigger: CATCAGCTCTTCCTGGGTGCACAGTCCCTCAGAGGC...TACAGCCAACTTTGACATCAGTGGGTGTGTTCTCAGTGGTGTGTCTGTACCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTCAAGACGAGGTGCCGACTGACTGACTCTCCCTCAAGACTGTCCATCGAAGCCAGTCAAGAATaGAATGAAGACCACTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPVKTRCRLTDSPSRLSIEASQE*NEDHLP Trigger: TGGCAAGTGGTCTTCATTGCATTCTTGACTGGCTTC...GATGGACAGTCTTGAGGGAGAGTCAGTCAGTCGGCACCTCGTCTTGACTGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR GCA 90 bp | ACTCTCCCTCAAGACTGTCCATCCAGCACAGGTTTGCTGAGAAGGCCTGGCTTCGTGGACAAAGTTTTCTaGTTCCGCTTCTGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLPQDCPSSTGLLRRPGFVDKVF*FRFCPR Trigger: TCTGGGACAGAAGCGGAAGCAGAAAACTTTGTCCAC...GAAGCCAGGCCTTCTCAGCAAACCTGTGCTGGATGGACAGTCTTGAGGGAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR GCA 90 bp | ACTTTAGGACCCCTAGGGAGAACACATGGCAACCAGCACATTGAGGCTCACCAGTACAGCTTCGAGAACTaGCTGTGGGGTGGACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLGPLGRTHGNQHIEAHQYSFEN*LWGGQS Trigger: ACTTTGTCCACCCCACAGGCAGTTCTCGAAGCTGTA...CTGGTGAGCCTCAATGTGCTGGTTGCCATGTGTTCTCCCTAGGGGTCCTAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | CTTATTTCAGGTTCATGTTGCTTGAGGATCCTATGCACTGAAAGCATCCGCGGTAGACCACTTGCCAGATaGTGTGGCCCCCTAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LISGSCCLRILCTESIRGRPLAR*CGPLEG Trigger: ACCCTCTAGGGGGCCACACCATCTGGCAAGTGGTCT...ACCGCGGATGCTTTCAGTGCATAGGATCCTCAAGCAACATGAACCTGAAATAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | AGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGAGGCAATTCAAAGGATGTGGAATAGATGGCTCTaGTCTCTGAGCCAATATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRPLPQREHGALEAIQRMWNRWL*SLSQYP Trigger: AGGATATTGGCTCAGAGACCAGAGCCATCTATTCCA...CATCCTTTGAATTGCCTCAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | AGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGAGGCAATTCAAAGGATGGTACAATGGAATAGATaGCTCTGGTCTCTGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRPLPQREHGALEAIQRMVQWNR*LWSLSQ Trigger: TTGGCTCAGAGACCAGAGCCATCTATTCCATTGTAC...CATCCTTTGAATTGCCTCAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | AGGTGCCGACTGACTGACTCTCCCTCAAGACTGTCCATCCAGCACAGGTTTGCTGATTCCAATAGGTTTTaGGTATGCAGCTGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RCRLTDSPSRLSIQHRFADSNRF*VCSCHR Trigger: TCTGTGACAGCTGCATACCCAAAACCTATTGGAATC...AGCAAACCTGTGCTGGATGGACAGTCTTGAGGGAGAGTCAGTCAGTCGGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | CAAGACTGTCCATCCAGCACAGGTTTGCTGAGAAGGCCTGGCTTCTCTGTGCTGTTCCTCTTGTCACACTaGCATAAGAGAAGCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QDCPSSTGLLRRPGFSVLFLLSH*HKRSIL Trigger: CAAGATGCTTCTCTTATGCCAGTGTGACAAGAGGAA...CAGCACAGAGAAGCCAGGCCTTCTCAGCAAACCTGTGCTGGATGGACAGTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR TCA 90 bp | AAGGTGACTCTAGGATTGAGTTTCGAGCAGTTTAGATCCCAGAAATTTTGTTTGTCGCCGTGCCGAAGGTaGTGGTGGGCTCACTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KVTLGLSFEQFRSQKFCLSPCRR*WWAHLE Trigger: TTCTAAGTGAGCCCACCATCACCTTCGGCACGGCGA...CAAACAAAATTTCTGGGATCTAAACTGCTCGAAACTCAATCCTAGAGTCACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR GCA 90 bp | CTTATTTCAGGTTCATGTTGCTTGAGGATCCTATGCACTGAAAGCATCCGCGGTTATTCCAACTGTCACTaGTACTGTGGTCTTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LISGSCCLRILCTESIRGYSNCH*YCGLGP Trigger: TGGACCAAGACCACAGTAGCAGTGACAGTTGGAATA...ACCGCGGATGCTTTCAGTGCATAGGATCCTCAAGCAACATGAACCTGAAATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR GCA 90 bp | TCAGGTACAGACACACCACTGAGAACACACCCACTGATGTCAAAGTTGGCTGTAAATAGGTTTTGGGTATaGAGCTGTCACAGAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGTDTPLRTHPLMSKLAVNRFWV*SCHRRC Trigger: ACACCTTCTGTGACAGCTGCATACCCAAAACCTATT...TACAGCCAACTTTGACATCAGTGGGTGTGTTCTCAGTGGTGTGTCTGTACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | TATTCTTCTTCAGGGCGGTTTCTGGAAAATAGTTCCAGTGTCAAAAACCCAAACCAGACTCTAACTGGATaGGGAGCTTGGAGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YSSSGRFLENSSSVKNPNQTLTG*GAWRSP Trigger: AGGACTTCTCCAAGCTCCCCATCCAGTTAGAGTCTG...GTTTGGGTTTTTGACACTGGAACTATTTTCCAGAAACCGCCCTGAAGAAGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | ATACAATACTTTCTGTCAGCTCCGAGCACAGTATTTCCTTTGATTTTCTATGTAACGGACTGTCTCTGCTaGTACTGCTGTTTGCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IQYFLSAPSTVFPLIFYVTDCLC*YCCLRR Trigger: GCGGCGCAAACAGCAGTACCAGCAGAGACAGTCCGT...TACATAGAAAATCAAAGGAAATACTGTGCTCGGAGCTGACAGAAAGTATTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR TCA 90 bp | AATACAATACTTTCTGTCAGCTCCGAGCACAGTATTTCCTTTGATTTTCTATGTTTGAGGATGGTGCTATaGCCCGGCAGCTTGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: NTILSVSSEHSISFDFLCLRMVL*PGSLST Trigger: TGTACTCAAGCTGCCGGGTCATAGCACCATCCTCAA...ACATAGAAAATCAAAGGAAATACTGTGCTCGGAGCTGACAGAAAGTATTGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| 3UTR CAA 72 bp | GCAGTACACTTCTCCTTCTTTCCTGCTGAATTGGCATaGGACCAAAATCAGGTATTCAGTGGATCAGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AVHFSFFPAELA*DQNQVFSGSVN Trigger: ATTTACTGATCCACTGAATACCTGATTTTGGTCCAATGCCAATTCAGCAGGAAAGAAGGAGAAGTGTACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR TCA 90 bp | AATACAATACTTTCTGTCAGCTCCGAGCACAGTATTTCCTTTGATTTTCTATGTACAGGACAAAGGAGATaGCCCAAGCCAGACCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: NTILSVSSEHSISFDFLCTGQRR*PKPDQS Trigger: TGATTGGTCTGGCTTGGGTCATCTCCTTTGTCCTGT...ACATAGAAAATCAAAGGAAATACTGTGCTCGGAGCTGACAGAAAGTATTGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | ATACAATACTTTCTGTCAGCTCCGAGCACAGTATTTCCTTTGATTTTCTATGTACTGTCACTGCTACTGTaGTCTTGGTCCATCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IQYFLSAPSTVFPLIFYVLSLLL*SWSICS Trigger: TGAGCAGATGGACCAAGACCACAGTAGCAGTGACAG...TACATAGAAAATCAAAGGAAATACTGTGCTCGGAGCTGACAGAAAGTATTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CCA 90 bp | ATACAATACTTTCTGTCAGCTCCGAGCACAGTATTTCCTTTGATTTTCTATGTATTCGAGAACTGCCTGTaGGGTGGACAAAGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQYFLSAPSTVFPLIFYVFENCL*GGQSFL Trigger: CAGAAAACTTTGTCCACCCCACAGGCAGTTCTCGAA...TACATAGAAAATCAAAGGAAATACTGTGCTCGGAGCTGACAGAAAGTATTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR GCA 90 bp | ATACAATACTTTCTGTCAGCTCCGAGCACAGTATTTCCTTTGATTTTCTATGTATTCCCTACAAAGTATTaGCAGAACAAGATGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IQYFLSAPSTVFPLIFYVFPTKY*QNKMAG Trigger: TCCTGCCATCTTGTTCTGGCAATACTTTGTAGGGAA...TACATAGAAAATCAAAGGAAATACTGTGCTCGGAGCTGACAGAAAGTATTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR GCA 90 bp | AAGGTGACTCTAGGATTGAGTTTCGAGCAGTTTAGATCCCAGAAATTTTGTTTGTTTGTTGACCTTAAATaGCACAATGACAAGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVTLGLSFEQFRSQKFCLFVDLK*HNDKDV Trigger: AACATCCTTGTCATTGTGGCATTTAAGGTCAACAAA...CAAACAAAATTTCTGGGATCTAAACTGCTCGAAACTCAATCCTAGAGTCACCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| 3UTR CAA 72 bp | CAATACTTTCTGTCAGCTCCGAGCACAGTATTTCCTTaGATTTTCTATGTAAATGTAGATCTATTGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QYFLSAPSTVFP*IFYVNVDLLLY Trigger: ATACAGCAATAGATCTACATTTACATAGAAAATCAAAGGAAATACTGTGCTCGGAGCTGACAGAAAGTATTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS CCA 90 bp | GAGCGGCCGTGGTCTTGTCCACCGAGGAGTTGGTGTCAGAGGTCTTaGCTGTGTCCACGGCAGACTCTAACTGGATGGGGAGCTTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ERPWSCPPRSWCQRS*LCPRQTLTGWGAWR Trigger: TCTCCAAGCTCCCCATCCAGTTAGAGTCTGCCGTGGACACAGCCAAGACCTCTGACACCAACTCCTCGGTGGACAAGACCACGGCCGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAGAATGAGAGCAGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGTTGGTGTCAGAGGTCTaGGCTGTGTCCACGGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ARRMRAAGPSPRENMVHLLVSEV*AVSTAD Trigger: GTCTGCCGTGGACACAGCCAAGACCTCTGACACCAA...CAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCTGCTCTCATTCTCCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | ACTCTCCCTCAAGACTGTCCATCCAGCACAGGTTTGCTGAGAAGGCCTGGCTTCTGCAATGAAGACCACTaGCCAGATGGTGTGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLPQDCPSSTGLLRRPGFCNEDH*PDGVAP Trigger: GGGGGCCACACCATCTGGCAAGTGGTCTTCATTGCA...GAAGCCAGGCCTTCTCAGCAAACCTGTGCTGGATGGACAGTCTTGAGGGAGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | GCCAGACTCCTGCTAGGCTGTGGGCTGACGTGTGTGTATGGGTCACTGCTATTGTTGTCCACCGAGGAGTaGGTGTCAGAGGTCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARLLLGCGLTCVYGSLLLLSTEE*VSEVLA Trigger: AGCCAAGACCTCTGACACCAACTCCTCGGTGGACAA...CAATAGCAGTGACCCATACACACACGTCAGCCCACAGCCTAGCAGGAGTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | CAAGACTGTCCATCCAGCACAGGTTTGCTGAGAAGGCCTGGCTTCTCTGTGCTGATAGTCCCCAGGTCCTaGTCTGGCACCTGCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QDCPSSTGLLRRPGFSVLIVPRS*SGTCRL Trigger: TAACCTGCAGGTGCCAGACAAGGACCTGGGGACTAT...CAGCACAGAGAAGCCAGGCCTTCTCAGCAAACCTGTGCTGGATGGACAGTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS CCA 90 bp | TGGTGTCAGAGGTCTTGGCTGTGTCCACGGCAGACTCTAACTGGATaGGGAGCTTGGAGAAGTCCTTCTGACAGTTGTCACGGTCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: WCQRSWLCPRQTLTG*GAWRSPSDSCHGHP Trigger: TGGATGACCGTGACAACTGTCAGAAGGACTTCTCCAAGCTCCCCATCCAGTTAGAGTCTGCCGTGGACACAGCCAAGACCTCTGACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | GGTCCAGTCAAGACGAGGTGCCGACTGACTGACTCTCCCTCAAGACTGTCCATCGAGGCAGCAGCATCGTaGTTATTCCAACTGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GPVKTRCRLTDSPSRLSIEAAAS*LFQLSL Trigger: CAGTGACAGTTGGAATAACAACGATGCTGCTGCCTC...GATGGACAGTCTTGAGGGAGAGTCAGTCAGTCGGCACCTCGTCTTGACTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | AGGTGCCGACTGACTGACTCTCCCTCAAGACTGTCCATCCAGCACAGGTTTGCTTCTGAGGAGGGTAGCTaGGTAGAGTTGAGGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCRLTDSPSRLSIQHRFASEEGS*VELRMV Trigger: CACCATCCTCAACTCTACCAAGCTACCCTCCTCAGA...AGCAAACCTGTGCTGGATGGACAGTCTTGAGGGAGAGTCAGTCAGTCGGCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS GCA 90 bp | GTCACCAATGCCAGGAAGCCAGTCAAGAATGCAATGAAGACCACTTaGCAGATGGTGTGGCCCCCTAGAGGGTCACTGGAGGTGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: VTNARKPVKNAMKTT*QMVWPPRGSLEVSF Trigger: AAATGACACCTCCAGTGACCCTCTAGGGGGCCACACCATCTGGCAAGTGGTCTTCATTGCATTCTTGACTGGCTTCCTGGCATTGGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS GCA 90 bp | TCGTGCCTTGCTGTTGTAGCTCATAGCTGCTACAGCTTCGAGAACTaGCTGTGGGGTGGACAAAGTTTTCTGCTTCCGCTTCTGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SCLAVVAHSCYSFEN*LWGGQSFLLPLLSQ Trigger: CTGGGACAGAAGCGGAAGCAGAAAACTTTGTCCACCCCACAGGCAGTTCTCGAAGCTGTAGCAGCTATGAGCTACAACAGCAAGGCACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CCA 90 bp | CTTGCTGTTGTAGCTCATAGCTGCTACAGCTTCGAGAACTGCCTGTaGGGTGGACAAAGTTTTCTGCTTCCGCTTCTGTCCCAGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LAVVAHSCYSFENCL*GGQSFLLPLLSQRP Trigger: AGGCCTCTGGGACAGAAGCGGAAGCAGAAAACTTTGTCCACCCCACAGGCAGTTCTCGAAGCTGTAGCAGCTATGAGCTACAACAGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | GCCAGACTCCTGCTAGGCTGTGGGCTGACGTGTGTGTATGGGTCACTGCTATTGGAAACAAAGGCGAGGTaGTACTGTTACTGTGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARLLLGCGLTCVYGSLLLETKAR*YCYCAR Trigger: CCTTGCACAGTAACAGTACAACCTCGCCTTTGTTTC...CAATAGCAGTGACCCATACACACACGTCAGCCCACAGCCTAGCAGGAGTCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAGAATGAGAGCAGCAGGCCCCTCCCCCAGAGAGAACATGGTGCACTTGACTGTCTTCAGCTGTTaGTTGACCTTAAATGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: ARRMRAAGPSPRENMVHLTVFSC*LTLNAT Trigger: TGTGGCATTTAAGGTCAACAAACAGCTGAAGACAGT...CAAGTGCACCATGTTCTCTCTGGGGGAGGGGCCTGCTGCTCTCATTCTCCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS GCA 90 bp | GCATTTCTCTCTACATCCATAGTCCCCAGGTCCTTGTCTGGCACCTaGAGGTTATCTGAGGAGGGTAGCTTGGTAGAGTTGAGGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AFLSTSIVPRSLSGT*RLSEEGSLVELRMV Trigger: CACCATCCTCAACTCTACCAAGCTACCCTCCTCAGATAACCTGCAGGTGCCAGACAAGGACCTGGGGACTATGGATGTAGAGAGAAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CCA 90 bp | AGGGAGGCAGCAGCATCGTTGTTATTCCAACTGTCACTGCTACTGTaGTCTTGGTCCATCTGCTCAGCACTGGGCTTCCAGCTCTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: REAAASLLFQLSLLL*SWSICSALGFQLLV Trigger: AACTAAGAGCTGGAAGCCCAGTGCTGAGCAGATGGACCAAGACCACAGTAGCAGTGACAGTTGGAATAACAACGATGCTGCTGCCTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | ACTTTAGGACCCCTAGGGAGAACACATGGCAACCAGCACATTGAGGCTCACCAGCACTGGAGGTGTCATTaGAGGAGAAATTCCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TLGPLGRTHGNQHIEAHQHWRCH*RRNSQR Trigger: CCTCTGGGAATTTCTCCTCAAATGACACCTCCAGTG...CTGGTGAGCCTCAATGTGCTGGTTGCCATGTGTTCTCCCTAGGGGTCCTAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS CCA 90 bp | AGGAAGCCAGTCAAGAATGCAATGAAGACCACTTGCCAGATGGTGTaGCCCCCTAGAGGGTCACTGGAGGTGTCATTTGAGGAGAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: RKPVKNAMKTTCQMV*PPRGSLEVSFEEKF Trigger: GAATTTCTCCTCAAATGACACCTCCAGTGACCCTCTAGGGGGCCACACCATCTGGCAAGTGGTCTTCATTGCATTCTTGACTGGCTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CCA 90 bp | GCAGCAGCATCGTTGTTATTCCAACTGTCACTGCTACTGTGGTCTTaGTCCATCTGCTCAGCACTGGGCTTCCAGCTCTTAGTTGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AAASLLFQLSLLLWS*SICSALGFQLLVVN Trigger: GTTCACAACTAAGAGCTGGAAGCCCAGTGCTGAGCAGATGGACCAAGACCACAGTAGCAGTGACAGTTGGAATAACAACGATGCTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | TATTCTTCTTCAGGGCGGTTTCTGGAAAATAGTTCCAGTGTCAAAAACCCAAACAGAGCGGCCGTGGTCTaGTCCACCGAGGAGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YSSSGRFLENSSSVKNPNRAAVV*STEELV Trigger: CACCAACTCCTCGGTGGACAAGACCACGGCCGCTCT...GTTTGGGTTTTTGACACTGGAACTATTTTCCAGAAACCGCCCTGAAGAAGAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS CCA 90 bp | TGTCTCTGCTGGTACTGCTGTTTGCGCCGCTTCCTCTTGTCACACTaGCATAAGAGAAGCATCTTGAAGGTGGTTCTGAATGTCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLCWYCCLRRFLLSH*HKRSILKVVLNVLL Trigger: CAACAAGACATTCAGAACCACCTTCAAGATGCTTCTCTTATGCCAGTGTGACAAGAGGAAGCGGCGCAAACAGCAGTACCAGCAGAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | CTTATTTCAGGTTCATGTTGCTTGAGGATCCTATGCACTGAAAGCATCCGCGGTACTGCTACTGTGGTCTaGGTCCATCTGCTCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LISGSCCLRILCTESIRGTATVV*VHLLST Trigger: AGTGCTGAGCAGATGGACCAAGACCACAGTAGCAGT...ACCGCGGATGCTTTCAGTGCATAGGATCCTCAAGCAACATGAACCTGAAATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS TCA 90 bp | ATGACCCGGCAGCTTGAGTACAATGGAATAGATGGCTCTGGTCTCTaGGCCAATATCCTCTTCATCAGAAGAAGCAGAGTTTTCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: MTRQLEYNGIDGSGL*ANILFIRRSRVFQG Trigger: TCCCTGGAAAACTCTGCTTCTTCTGATGAAGAGGATATTGGCTCAGAGACCAGAGCCATCTATTCCATTGTACTCAAGCTGCCGGGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | TATTCTTCTTCAGGGCGGTTTCTGGAAAATAGTTCCAGTGTCAAAAACCCAAACAGCCCAGCCAGCTCTTaGGTACGTTTCTCAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YSSSGRFLENSSSVKNPNSPASS*VRFSVS Trigger: GGAGACTGAGAAACGTACCAAAGAGCTGGCTGGGCT...GTTTGGGTTTTTGACACTGGAACTATTTTCCAGAAACCGCCCTGAAGAAGAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | GGTGCACTTGAGGCAATTCAAAGGATGATGCAAAATTCAGTTGTCACAATGGAACACCGGCTCGTTTTGTaGTTCGTTTGGCTCGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GALEAIQRMMQNSVVTMEHRLVL*FVWLGK Trigger: CTTACCGAGCCAAACGAACAACAAAACGAGCCGGTG...TTCCATTGTGACAACTGAATTTTGCATCATCCTTTGAATTGCCTCAAGTGCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | AAGGTGACTCTAGGATTGAGTTTCGAGCAGTTTAGATCCCAGAAATTTTGTTTGTCACACCGGCTCGTTTaGTTGTTCGTTTGGCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: KVTLGLSFEQFRSQKFCLSHRLV*LFVWLG Trigger: ACCGAGCCAAACGAACAACAAAACGAGCCGGTGTGA...CAAACAAAATTTCTGGGATCTAAACTGCTCGAAACTCAATCCTAGAGTCACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | AATACAATACTTTCTGTCAGCTCCGAGCACAGTATTTCCTTTGATTTTCTATGTGTTGTAGCTGTCCAATaGAGAGACTGTCCCCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NTILSVSSEHSISFDFLCVVAVQ*RDCPQG Trigger: CCCTTGGGGACAGTCTCTCAATTGGACAGCTACAAC...ACATAGAAAATCAAAGGAAATACTGTGCTCGGAGCTGACAGAAAGTATTGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | ATACAATACTTTCTGTCAGCTCCGAGCACAGTATTTCCTTTGATTTTCTATGTAGCGGCCTTCTTCTCCTaGATGAGCGACATCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IQYFLSAPSTVFPLIFYVAAFFS*MSDILF Trigger: GAAAAGGATGTCGCTCATCAAGGAGAAGAAGGCCGC...TACATAGAAAATCAAAGGAAATACTGTGCTCGGAGCTGACAGAAAGTATTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS-3UTR CAA 90 bp | CTTGAGGCAATTCAAAGGATGATGCAAAATTCAGTTGTCACAATGGAAAGAACTCATAAGAGAAGCATCTaGAAGGTGGTTCTGAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LEAIQRMMQNSVVTMERTHKRSI*KVVLNV Trigger: GACATTCAGAACCACCTTCAAGATGCTTCTCTTATG...AGTTCTTTCCATTGTGACAACTGAATTTTGCATCATCCTTTGAATTGCCTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187510.7 |
||
| CDS CCA 72 bp | GAGGTAGAGCGGCCGTGGTCTTGTCCACCGAGGAGTTaGTGTCAGAGGTCTTGGCTGTGTCCACGGCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: EVERPWSCPPRS*CQRSWLCPRQT Trigger: AGTCTGCCGTGGACACAGCCAAGACCTCTGACACCAACTCCTCGGTGGACAAGACCACGGCCGCTCTACCTC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CAA 72 bp | AGAGGTAGAGCGGCCGTGGTCTTGTCCACCGAGGAGTaGGTGTCAGAGGTCTTGGCTGTGTCCACGGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RGRAAVVLSTEE*VSEVLAVSTAD Trigger: GTCTGCCGTGGACACAGCCAAGACCTCTGACACCAACTCCTCGGTGGACAAGACCACGGCCGCTCTACCTCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CAA 90 bp | AGAGCGGCCGTGGTCTTGTCCACCGAGGAGTTGGTGTCAGAGGTCTaGGCTGTGTCCACGGCAGACTCTAACTGGATGGGGAGCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RAAVVLSTEELVSEV*AVSTADSNWMGSLE Trigger: CTCCAAGCTCCCCATCCAGTTAGAGTCTGCCGTGGACACAGCCAAGACCTCTGACACCAACTCCTCGGTGGACAAGACCACGGCCGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CAA 90 bp | GCCAGCGTGGCTTCTTTGAAGGACAGAGGTAGAGCGGCCGTGGTCTaGTCCACCGAGGAGTTGGTGTCAGAGGTCTTGGCTGTGTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: ASVASLKDRGRAAVV*STEELVSEVLAVST Trigger: CGTGGACACAGCCAAGACCTCTGACACCAACTCCTCGGTGGACAAGACCACGGCCGCTCTACCTCTGTCCTTCAAAGAAGCCACGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CAA 90 bp | TTGAAGGACAGAGGTAGAGCGGCCGTGGTCTTGTCCACCGAGGAGTaGGTGTCAGAGGTCTTGGCTGTGTCCACGGCAGACTCTAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LKDRGRAAVVLSTEE*VSEVLAVSTADSNW Trigger: CCAGTTAGAGTCTGCCGTGGACACAGCCAAGACCTCTGACACCAACTCCTCGGTGGACAAGACCACGGCCGCTCTACCTCTGTCCTTCAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CAA 72 bp | GTGGTCTTGTCCACCGAGGAGTTGGTGTCAGAGGTCTaGGCTGTGTCCACGGCAGACTCTAACTGGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VVLSTEELVSEV*AVSTADSNWMG Trigger: CCCCATCCAGTTAGAGTCTGCCGTGGACACAGCCAAGACCTCTGACACCAACTCCTCGGTGGACAAGACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS GCA 72 bp | GCCAGGAAGCCAGTCAAGAATGCAATGAAGACCACTTaGCAGATGGTGTGGCCCCCTAGAGGGTCACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ARKPVKNAMKTT*QMVWPPRGSLE Trigger: CTCCAGTGACCCTCTAGGGGGCCACACCATCTGGCAAGTGGTCTTCATTGCATTCTTGACTGGCTTCCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CCA 72 bp | TGGTCTTGTCCACCGAGGAGTTGGTGTCAGAGGTCTTaGCTGTGTCCACGGCAGACTCTAACTGGATGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: WSCPPRSWCQRS*LCPRQTLTGWG Trigger: TCCCCATCCAGTTAGAGTCTGCCGTGGACACAGCCAAGACCTCTGACACCAACTCCTCGGTGGACAAGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CAA 72 bp | GCTTCTTTGAAGGACAGAGGTAGAGCGGCCGTGGTCTaGTCCACCGAGGAGTTGGTGTCAGAGGTCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASLKDRGRAAVV*STEELVSEVLA Trigger: AGCCAAGACCTCTGACACCAACTCCTCGGTGGACAAGACCACGGCCGCTCTACCTCTGTCCTTCAAAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CAA 72 bp | GTCTTGAGAGCAAACCTCTTAGCCAGCGTGGCTTCTTaGAAGGACAGAGGTAGAGCGGCCGTGGTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLRANLLASVAS*KDRGRAAVVLS Trigger: GGACAAGACCACGGCCGCTCTACCTCTGTCCTTCAAAGAAGCCACGCTGGCTAAGAGGTTTGCTCTCAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CCA 72 bp | AGGTCTTGGCTGTGTCCACGGCAGACTCTAACTGGATaGGGAGCTTGGAGAAGTCCTTCTGACAGTTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RSWLCPRQTLTG*GAWRSPSDSCH Trigger: GTGACAACTGTCAGAAGGACTTCTCCAAGCTCCCCATCCAGTTAGAGTCTGCCGTGGACACAGCCAAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS GCA 72 bp | ATGACCGTTTCGTGCCTTGCTGTTGTAGCTCATAGCTaGTACAGCTTCGAGAACTGCCTGTGGGGTGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: MTVSCLAVVAHS*YSFENCLWGGQ Trigger: TTGTCCACCCCACAGGCAGTTCTCGAAGCTGTAGCAGCTATGAGCTACAACAGCAAGGCACGAAACGGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CCA 72 bp | GTCAAGAATGCAATGAAGACCACTTGCCAGATGGTGTaGCCCCCTAGAGGGTCACTGGAGGTGTCATTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VKNAMKTTCQMV*PPRGSLEVSFE Trigger: CTCAAATGACACCTCCAGTGACCCTCTAGGGGGCCACACCATCTGGCAAGTGGTCTTCATTGCATTCTTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CCA 72 bp | GTAGCTCATAGCTGCTACAGCTTCGAGAACTGCCTGTaGGGTGGACAAAGTTTTCTGCTTCCGCTTCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VAHSCYSFENCL*GGQSFLLPLLS Trigger: GGACAGAAGCGGAAGCAGAAAACTTTGTCCACCCCACAGGCAGTTCTCGAAGCTGTAGCAGCTATGAGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CCA 72 bp | GCAGCATCGTTGTTATTCCAACTGTCACTGCTACTGTaGTCTTGGTCCATCTGCTCAGCACTGGGCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AASLLFQLSLLL*SWSICSALGFQ Trigger: CTGGAAGCCCAGTGCTGAGCAGATGGACCAAGACCACAGTAGCAGTGACAGTTGGAATAACAACGATGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS CAA 90 bp | GGCAGCAGCATCGTTGTTATTCCAACTGTCACTGCTACTGTGGTCTaGGTCCATCTGCTCAGCACTGGGCTTCCAGCTCTTAGTTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GSSIVVIPTVTATVV*VHLLSTGLPALSCE Trigger: TTCACAACTAAGAGCTGGAAGCCCAGTGCTGAGCAGATGGACCAAGACCACAGTAGCAGTGACAGTTGGAATAACAACGATGCTGCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS TCA 72 bp | GCACTGGGCTTCCAGCTCTTAGTTGTGAACCAGAAGTaGCAGCCACCATACTTCCTCCTAGATGACCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ALGFQLLVVNQK*QPPYFLLDDRF Trigger: GAAACGGTCATCTAGGAGGAAGTATGGTGGCTGTCACTTCTGGTTCACAACTAAGAGCTGGAAGCCCAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
||
| CDS GCA 72 bp | GCTGTTGTAGCTCATAGCTGCTACAGCTTCGAGAACTaGCTGTGGGGTGGACAAAGTTTTCTGCTTCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: AVVAHSCYSFEN*LWGGQSFLLPL Trigger: AAGCGGAAGCAGAAAACTTTGTCCACCCCACAGGCAGTTCTCGAAGCTGTAGCAGCTATGAGCTACAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
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| CDS CAA 72 bp | TGTCTCTGCTGGTACTGCTGTTTGCGCCGCTTCCTCTaGTCACACTGGCATAAGAGAAGCATCTTGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: CLCWYCCLRRFL*SHWHKRSILKV Trigger: CACCTTCAAGATGCTTCTCTTATGCCAGTGTGACAAGAGGAAGCGGCGCAAACAGCAGTACCAGCAGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
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| CDS CAA 90 bp | ATGACGGACTGTCTCTGCTGGTACTGCTGTTTGCGCCGCTTCCTCTaGTCACACTGGCATAAGAGAAGCATCTTGAAGGTGGTTCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: MTDCLCWYCCLRRFL*SHWHKRSILKVVLN Trigger: ATTCAGAACCACCTTCAAGATGCTTCTCTTATGCCAGTGTGACAAGAGGAAGCGGCGCAAACAGCAGTACCAGCAGAGACAGTCCGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
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| CDS TCA 72 bp | TCCTTGATGAGCGACATCCTTTTCCGCTTGGTGATCTaGCTTCTGGTCTTGAGAGCAAACCTCTTAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SLMSDILFRLVI*LLVLRANLLAS Trigger: GCTGGCTAAGAGGTTTGCTCTCAAGACCAGAAGTCAGATCACCAAGCGGAAAAGGATGTCGCTCATCAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
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| CDS CAA 72 bp | ATCGTTGTTATTCCAACTGTCACTGCTACTGTGGTCTaGGTCCATCTGCTCAGCACTGGGCTTCCAGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: IVVIPTVTATVV*VHLLSTGLPAL Trigger: AAGAGCTGGAAGCCCAGTGCTGAGCAGATGGACCAAGACCACAGTAGCAGTGACAGTTGGAATAACAACGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
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| CDS CCA 72 bp | TGGTACTGCTGTTTGCGCCGCTTCCTCTTGTCACACTaGCATAAGAGAAGCATCTTGAAGGTGGTTCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: WYCCLRRFLLSH*HKRSILKVVLN Trigger: ATTCAGAACCACCTTCAAGATGCTTCTCTTATGCCAGTGTGACAAGAGGAAGCGGCGCAAACAGCAGTACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063093.10 ENSMUST00000187510.7 |
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