Pregenerated sensors for CHRM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045613Ensembl transcript IDs: ENSMUST00000172278.8
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCATAGCCTCTCAAGTAGGGGCTGTGATTCCATAGCCAGGCATTaGTTATGCTGCAGTGCTCTAGGTGTGTGGAAGCTGCTGGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: SHSLSSRGCDSIARH*LCCSALGVWKLLVS Trigger: GGAAACCAGCAGCTTCCACACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCTACTTGAGAGGCTATGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR GCA 90 bp | AGCCTCTCAAGTAGGGGCTGTGATTCCATAGCCAGGCATTGGTTATaGTGCAGTGCTCTAGGTGTGTGGAAGCTGCTGGTTTCCATAGGT | + |
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Preference number: 1 (lower is better) Translates to: SLSSRGCDSIARHWL*CSALGVWKLLVSIG Trigger: ACCTATGGAAACCAGCAGCTTCCACACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCTACTTGAGAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR CCA 90 bp | GATTCCATAGCCAGGCATTGGTTATGCTGCAGTGCTCTAGGTGTGTaGAAGCTGCTGGTTTCCATAGGTGTGGTCTGTGCTCTTATCTGT | + |
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Preference number: 1 (lower is better) Translates to: DSIARHWLCCSALGV*KLLVSIGVVCALIC Trigger: ACAGATAAGAGCACAGACCACACCTATGGAAACCAGCAGCTTCCACACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR CCA 90 bp | GAAATCCTTACAGGTTGTACACCATCAAAGAGTACATCGACACAGTaGGGAGTGGCAGAGTGTCCATTTTCATGGGTGACTCTGGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: EILTGCTPSKSTSTQ*GVAECPFSWVTLAR Trigger: TCTGGCCAGAGTCACCCATGAAAATGGACACTCTGCCACTCCCCACTGTGTCGATGTACTCTTTGATGGTGTACAACCTGTAAGGATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR TCA 90 bp | GTACATCGACACAGTGGGGAGTGGCAGAGTGTCCATTTTCATGGGTaGCTCTGGCCAGATTTAGAAGTCCTGCAGATACTATCCATATAC | + |
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Preference number: 1 (lower is better) Translates to: VHRHSGEWQSVHFHG*LWPDLEVLQILSIY Trigger: GTATATGGATAGTATCTGCAGGACTTCTAAATCTGGCCAGAGTCACCCATGAAAATGGACACTCTGCCACTCCCCACTGTGTCGATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR TCA 90 bp | GTGCACACAGGTCAGGCAGGTTCAAGTTCAAACAGATCGCCCTTCTaGCCTTCTGTCTTCTCATCTCAAACTTCATCTTGCCTCAGTGAA | + |
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Preference number: 1 (lower is better) Translates to: VHTGQAGSSSNRSPF*PSVFSSQTSSCLSE Trigger: TTCACTGAGGCAAGATGAAGTTTGAGATGAGAAGACAGAAGGTCAGAAGGGCGATCTGTTTGAACTTGAACCTGCCTGACCTGTGTGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR TCA 90 bp | GTTGCTGCTGTCCTATCCTTTATCACCCACTTGCTGAGATGTTCCTaGCATGCAGTCAGACAAAAGAACTCTGGTAGCTCTGAGGACTAC | + |
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Preference number: 1 (lower is better) Translates to: VAAVLSFITHLLRCS*HAVRQKNSGSSEDY Trigger: GTAGTCCTCAGAGCTACCAGAGTTCTTTTGTCTGACTGCATGTCAGGAACATCTCAGCAAGTGGGTGATAAAGGATAGGACAGCAGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR CCA 90 bp | AAGAGTACATCGACACAGTGGGGAGTGGCAGAGTGTCCATTTTCATaGGTGACTCTGGCCAGATTTAGAAGTCCTGCAGATACTATCCAT | + |
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Preference number: 1 (lower is better) Translates to: KSTSTQWGVAECPFS*VTLARFRSPADTIH Trigger: ATGGATAGTATCTGCAGGACTTCTAAATCTGGCCAGAGTCACCCATGAAAATGGACACTCTGCCACTCCCCACTGTGTCGATGTACTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR CCA 90 bp | TCCAGCTGGGGGTGCCTTCCTACTCTATTTGTATCACCAGTGTTATaGTTGTTGGTGAAGATATCAAATTGGAAAGGGGAGCAACAGTGG | + |
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Preference number: 1 (lower is better) Translates to: SSWGCLPTLFVSPVL*LLVKISNWKGEQQW Trigger: CCACTGTTGCTCCCCTTTCCAATTTGATATCTTCACCAACAACCATAACACTGGTGATACAAATAGAGTAGGAAGGCACCCCCAGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR CCA 90 bp | GCATGGCGTTGTATATACATGCTGAGGATACATGTCTCATCCAGCTaGGGGTGCCTTCCTACTCTATTTGTATCACCAGTGTTATGGTTG | + |
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Preference number: 1 (lower is better) Translates to: AWRCIYMLRIHVSSS*GCLPTLFVSPVLWL Trigger: CAACCATAACACTGGTGATACAAATAGAGTAGGAAGGCACCCCCAGCTGGATGAGACATGTATCCTCAGCATGTATATACAACGCCATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR TCA 90 bp | ACAAAGATTAGCTCATGGTGGATTGGGCTTAAAGCAAACAGAGAATaGATCCTGGCCTCCCAATGGTGGCCATGTCTGTATCACATAGCA | + |
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Preference number: 1 (lower is better) Translates to: TKISSWWIGLKANRE*ILASQWWPCLYHIA Trigger: TGCTATGTGATACAGACATGGCCACCATTGGGAGGCCAGGATTCATTCTCTGTTTGCTTTAAGCCCAATCCACCATGAGCTAATCTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR TCA 90 bp | TTTAAGAGAAGCCTAATGGAAAGGCATGGCGTTGTATATACATGCTaGGGATACATGTCTCATCCAGCTGGGGGTGCCTTCCTACTCTAT | + |
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Preference number: 1 (lower is better) Translates to: FKRSLMERHGVVYTC*GYMSHPAGGAFLLY Trigger: ATAGAGTAGGAAGGCACCCCCAGCTGGATGAGACATGTATCCTCAGCATGTATATACAACGCCATGCCTTTCCATTAGGCTTCTCTTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR GCA 90 bp | CGTTGTATATACATGCTGAGGATACATGTCTCATCCAGCTGGGGGTaGCTTCCTACTCTATTTGTATCACCAGTGTTATGGTTGTTGGTG | + |
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Preference number: 1 (lower is better) Translates to: RCIYMLRIHVSSSWG*LPTLFVSPVLWLLV Trigger: CACCAACAACCATAACACTGGTGATACAAATAGAGTAGGAAGGCACCCCCAGCTGGATGAGACATGTATCCTCAGCATGTATATACAACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR GCA 90 bp | GCACAGCATTGCCGGGAATATGTTCGGGGCTCTCCATACCATCTCTaGATCCTATTAGATTTTCTTTCTTCTTATCTCTCATTGTATAGT | + |
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Preference number: 1 (lower is better) Translates to: AQHCREYVRGSPYHL*ILLDFLSSYLSLYS Trigger: ACTATACAATGAGAGATAAGAAGAAAGAAAATCTAATAGGATGCAGAGATGGTATGGAGAGCCCCGAACATATTCCCGGCAATGCTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR GCA 90 bp | TATATTGTTAGCAACTTGCTTCTTGCTAGCTTACAATGTTGCTGTTaGTGCTGTCCTATCCTTTATCACCCACTTGCTGAGATGTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: YIVSNLLLASLQCCC*CCPILYHPLAEMFL Trigger: CAGGAACATCTCAGCAAGTGGGTGATAAAGGATAGGACAGCAGCAACAGCAACATTGTAAGCTAGCAAGAAGCAAGTTGCTAACAATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR TCA 90 bp | TCCCAATACTTGGGATATGCCATTAACATAATCATGACTTGGTCATaGGGCAATCATTTATTTACTCTAGAAGTGAGCTGGCTCCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: SQYLGYAINIIMTWS*GNHLFTLEVSWLLF Trigger: AAAGAGGAGCCAGCTCACTTCTAGAGTAAATAAATGATTGCCTCATGACCAAGTCATGATTATGTTAATGGCATATCCCAAGTATTGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR TCA 90 bp | ATTCAAAACTCCTTCTTATTAGACACAAATGCCTATTCCATGTTGTaGCCATCAAAATGGCCCTACTTATCACTAAGTATCCATAGGGTA | + |
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Preference number: 1 (lower is better) Translates to: IQNSFLLDTNAYSML*PSKWPYLSLSIHRV Trigger: TACCCTATGGATACTTAGTGATAAGTAGGGCCATTTTGATGGTCACAACATGGAATAGGCATTTGTGTCTAATAAGAAGGAGTTTTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR TCA 90 bp | CTTGCAATACTCATGGAATGGCGGAGGAGGAATCAGAGCACACAGTaGAAATCTGAACTTTATAACAGAATTTATAACTTTAATTCCTAT | + |
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Preference number: 1 (lower is better) Translates to: LAILMEWRRRNQSTQ*KSELYNRIYNFNSY Trigger: ATAGGAATTAAAGTTATAAATTCTGTTATAAAGTTCAGATTTTCACTGTGTGCTCTGATTCCTCCTCCGCCATTCCATGAGTATTGCAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCAGTGCTCTAGGTGTGCGACACAGTGGGGAGTaGCAGAGTGTCCATTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: RGCDSIARHWLCCSALGVRHSGE*QSVHFH Trigger: ATGAAAATGGACACTCTGCCACTCCCCACTGTGTCG...CACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCAGTGCTCTAGGTGTGACAGAGAATGAATCCTaGCCTCCCAATGGTGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: RGCDSIARHWLCCSALGVTENES*PPNGGH Trigger: ATGGCCACCATTGGGAGGCCAGGATTCATTCTCTGT...CACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCAGTGCTCTAGGTGTGAACAGATCGCCCTTCTaGCCTTCTGTCTTCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: RGCDSIARHWLCCSALGVNRSPF*PSVFSS Trigger: AGATGAGAAGACAGAAGGTCAGAAGGGCGATCTGTT...CACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR CCA 90 bp | CATAGCCTCTCAAGTAGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCAGTGCTCTAGGTGTGTaGAAGCTGCTGGTTTCCATA | + |
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Preference number: 2 (lower is better) Translates to: HSLSSRGCDSIARHWLCCSALGV*KLLVSI Trigger: TATGGAAACCAGCAGCTTCCACACACCTAGAGCACT...GCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCTACTTGAGAGGCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCAGTGCTCTAGGTGTGTTTTCCTCTTGGGGTTaGCACAGTAAACTAATTGAG | + |
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Preference number: 2 (lower is better) Translates to: RGCDSIARHWLCCSALGVFSSWG*HSKLIE Trigger: CTCAATTAGTTTACTGTGTCAACCCCAAGAGGAAAA...CACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR CCA 90 bp | GACCTTCTGTCTTCTCATCTCAAACTTCATCTTGCCTCAGTGAACTTTCTCCAGAGTACATCGACACAGTaGGGAGTGGCAGAGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: DLLSSHLKLHLASVNFLQSTSTQ*GVAECP Trigger: TGGACACTCTGCCACTCCCCACTGTGTCGATGTACT...CTGGAGAAAGTTCACTGAGGCAAGATGAAGTTTGAGATGAGAAGACAGAAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR GCA 90 bp | CATAGCCTCTCAAGTAGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCTCTCAAACTTCATCTTaGCTCAGTGAACTTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: HSLSSRGCDSIARHWLCCSQTSS*LSELSP Trigger: TGGAGAAAGTTCACTGAGGCAAGATGAAGTTTGAGA...GCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCTACTTGAGAGGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCAGTGCTCTAGGTGTGCTTATTAGACACAAATaGCTATTCCATGTTGTGACC | + |
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Preference number: 2 (lower is better) Translates to: RGCDSIARHWLCCSALGVLIRHK*LFHVVT Trigger: GGTCACAACATGGAATAGGCATTTGTGTCTAATAAG...CACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR CAA 90 bp | TGGGGGTGCCTTCCTACTCTATTTGTATCACCAGTGTTATGGTTGTaGGTGAAGATATCAAATTGGAAAGGGGAGCAACAGTGGATGAAC | + |
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Preference number: 2 (lower is better) Translates to: WGCLPTLFVSPVLWL*VKISNWKGEQQWMN Trigger: GTTCATCCACTGTTGCTCCCCTTTCCAATTTGATATCTTCACCAACAACCATAACACTGGTGATACAAATAGAGTAGGAAGGCACCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR CAA 90 bp | AGGAAAGATTACAGTAGAACAAGACAAAGATTAGCTCATGGTGGATaGGGCTTAAAGCAAACAGAGAATGAATCCTGGCCTCCCAATGGT | + |
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Preference number: 2 (lower is better) Translates to: RKDYSRTRQRLAHGG*GLKQTENESWPPNG Trigger: ACCATTGGGAGGCCAGGATTCATTCTCTGTTTGCTTTAAGCCCAATCCACCATGAGCTAATCTTTGTCTTGTTCTACTGTAATCTTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAACTTGACAGTTTCTCTTTTAAGATGTGGTAGCTGTGGCAAATTGCTAGGCGAGTGTCCATTTTCATaGGTGACTCTGGCCAGATTT | + |
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Preference number: 2 (lower is better) Translates to: LNLTVSLLRCGSCGKLLGECPFS*VTLARF Trigger: AAATCTGGCCAGAGTCACCCATGAAAATGGACACTC...GCCTAGCAATTTGCCACAGCTACCACATCTTAAAAGAGAAACTGTCAAGTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR TCA 90 bp | GACCTTCTGTCTTCTCATCTCAAACTTCATCTTGCCTCAGTGAACTTTCTCCAGGGAAGAGAGGAGAAATaGACAGTGATTCCATTAAAA | + |
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Preference number: 2 (lower is better) Translates to: DLLSSHLKLHLASVNFLQGREEK*TVIPLK Trigger: TTTTAATGGAATCACTGTTCATTTCTCCTCTCTTCC...CTGGAGAAAGTTCACTGAGGCAAGATGAAGTTTGAGATGAGAAGACAGAAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR GCA 90 bp | TTGAACTTGACAGTTTCTCTTTTAAGATGTGGTAGCTGTGGCAAATTGCTAGGCGAGATGTTCCTGACATaGAGTCAGACAAAAGAACTC | + |
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Preference number: 2 (lower is better) Translates to: LNLTVSLLRCGSCGKLLGEMFLT*SQTKEL Trigger: GAGTTCTTTTGTCTGACTGCATGTCAGGAACATCTC...GCCTAGCAATTTGCCACAGCTACCACATCTTAAAAGAGAAACTGTCAAGTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR GCA 90 bp | AATTCCCTCTCATGCCATCATTTCTTCTGGATCAAACAGCATCAAGTAAGCAAAGCTAGCTTACAATGTTaGTGTTGCTGCTGTCCTATC | + |
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Preference number: 2 (lower is better) Translates to: NSLSCHHFFWIKQHQVSKASLQC*CCCCPI Trigger: GATAGGACAGCAGCAACAGCAACATTGTAAGCTAGC...TTTGCTTACTTGATGCTGTTTGATCCAGAAGAAATGATGGCATGAGAGGGAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR CCA 90 bp | AATTCCCTCTCATGCCATCATTTCTTCTGGATCAAACAGCATCAAGTAAGCAAATTAGACTGTGGGAAATaGCATGTCCAGAATCACATG | + |
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Preference number: 2 (lower is better) Translates to: NSLSCHHFFWIKQHQVSKLDCGK*HVQNHM Trigger: CATGTGATTCTGGACATGCCATTTCCCACAGTCTAA...TTTGCTTACTTGATGCTGTTTGATCCAGAAGAAATGATGGCATGAGAGGGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTTGTACACATTAACATTGTGCACACAGGTCAGGCAGGTTCAAGTTCAAACATCATTGTATAGTGCCTaGTTCTTTGTGTTTAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: MLYTLTLCTQVRQVQVQTSLYSA*FFVFRS Trigger: AGACCTAAACACAAAGAAGCAGGCACTATACAATGA...TGTTTGAACTTGAACCTGCCTGACCTGTGTGCACAATGTTAATGTGTACAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAAACAGATCGCCCTTCTGACCTTCTGTCTTCTCATCTCAAACTTCATCTTGTCTCCATACCATCTCTaGATCCTATTAGATTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: FKQIALLTFCLLISNFILSPYHL*ILLDFL Trigger: AAGAAAATCTAATAGGATGCAGAGATGGTATGGAGA...CAAGATGAAGTTTGAGATGAGAAGACAGAAGGTCAGAAGGGCGATCTGTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR GCA 90 bp | AATTCCCTCTCATGCCATCATTTCTTCTGGATCAAACAGCATCAAGTAAGCAAATTACAATGTTGCTGTTaGTGCTGTCCTATCCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: NSLSCHHFFWIKQHQVSKLQCCC*CCPILY Trigger: ATAAAGGATAGGACAGCAGCAACAGCAACATTGTAA...TTTGCTTACTTGATGCTGTTTGATCCAGAAGAAATGATGGCATGAGAGGGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR CCA 90 bp | AATTTTCCACACAAAGGAACTCAAGTGAGTGAAATCCTTACAGGTTGTACACCAATAGTATGGCCTAGTTaGGCTTTTGCTGTTTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: NFPHKGTQVSEILTGCTPIVWPS*AFAVLF Trigger: AAACAAAACAGCAAAAGCCCAACTAGGCCATACTAT...TGGTGTACAACCTGTAAGGATTTCACTCACTTGAGTTCCTTTGTGTGGAAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR CCA 72 bp | GCCAGGCATTGGTTATGCTGCAGTGCTCTAGGTGTGTaGAAGCTGCTGGTTTCCATAGGTGTGGTCTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: ARHWLCCSALGV*KLLVSIGVVCA Trigger: AGCACAGACCACACCTATGGAAACCAGCAGCTTCCACACACCTAGAGCACTGCAGCATAACCAATGCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR GCA 72 bp | AGTAGGGGCTGTGATTCCATAGCCAGGCATTGGTTATaGTGCAGTGCTCTAGGTGTGTGGAAGCTGCTGGTT | + |
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Preference number: 3 (lower is better) Translates to: SRGCDSIARHWL*CSALGVWKLLV Trigger: AACCAGCAGCTTCCACACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR TCA 72 bp | CACAGTGGGGAGTGGCAGAGTGTCCATTTTCATGGGTaGCTCTGGCCAGATTTAGAAGTCCTGCAGATACTA | + |
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Preference number: 3 (lower is better) Translates to: HSGEWQSVHFHG*LWPDLEVLQIL Trigger: TAGTATCTGCAGGACTTCTAAATCTGGCCAGAGTCACCCATGAAAATGGACACTCTGCCACTCCCCACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR TCA 72 bp | AAAAGAACTCTGGTAGCTCTGAGGACTACACGCTGTTaGACCTGCCTTGCAATACTCATGGAATGGCGGAGG | + |
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Preference number: 3 (lower is better) Translates to: KRTLVALRTTRC*TCLAILMEWRR Trigger: CCTCCGCCATTCCATGAGTATTGCAAGGCAGGTTCAACAGCGTGTAGTCCTCAGAGCTACCAGAGTTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR TCA 72 bp | AGCCTAATGGAAAGGCATGGCGTTGTATATACATGCTaGGGATACATGTCTCATCCAGCTGGGGGTGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: SLMERHGVVYTC*GYMSHPAGGAF Trigger: GAAGGCACCCCCAGCTGGATGAGACATGTATCCTCAGCATGTATATACAACGCCATGCCTTTCCATTAGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR-3UTR CAA 90 bp | GCATTGCCGGGAATATGTTCGGGGCTCTCCATACCATCTCTGCATCCTATTAGAATAGTGCCTGCTTCTTaGTGTTTAGGTCTCCGTGTT | + |
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Preference number: 3 (lower is better) Translates to: ALPGICSGLSIPSLHPIRIVPAS*CLGLRV Trigger: AACACGGAGACCTAAACACAAAGAAGCAGGCACTAT...TCTAATAGGATGCAGAGATGGTATGGAGAGCCCCGAACATATTCCCGGCAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR GCA 72 bp | TACATGCTGAGGATACATGTCTCATCCAGCTGGGGGTaGCTTCCTACTCTATTTGTATCACCAGTGTTATGG | + |
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Preference number: 3 (lower is better) Translates to: YMLRIHVSSSWG*LPTLFVSPVLW Trigger: CCATAACACTGGTGATACAAATAGAGTAGGAAGGCACCCCCAGCTGGATGAGACATGTATCCTCAGCATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR TCA 72 bp | GTCCTATCCTTTATCACCCACTTGCTGAGATGTTCCTaGCATGCAGTCAGACAAAAGAACTCTGGTAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: VLSFITHLLRCS*HAVRQKNSGSS Trigger: AGAGCTACCAGAGTTCTTTTGTCTGACTGCATGTCAGGAACATCTCAGCAAGTGGGTGATAAAGGATAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR GCA 72 bp | AGCAACTTGCTTCTTGCTAGCTTACAATGTTGCTGTTaGTGCTGTCCTATCCTTTATCACCCACTTGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: SNLLLASLQCCC*CCPILYHPLAE Trigger: CTCAGCAAGTGGGTGATAAAGGATAGGACAGCAGCAACAGCAACATTGTAAGCTAGCAAGAAGCAAGTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| 3UTR CCA 72 bp | TGTATATACATGCTGAGGATACATGTCTCATCCAGCTaGGGGTGCCTTCCTACTCTATTTGTATCACCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: CIYMLRIHVSSS*GCLPTLFVSPV Trigger: CACTGGTGATACAAATAGAGTAGGAAGGCACCCCCAGCTGGATGAGACATGTATCCTCAGCATGTATATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR GCA 72 bp | TGCCGGGAATATGTTCGGGGCTCTCCATACCATCTCTaGATCCTATTAGATTTTCTTTCTTCTTATCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: CREYVRGSPYHL*ILLDFLSSYLS Trigger: TGAGAGATAAGAAGAAAGAAAATCTAATAGGATGCAGAGATGGTATGGAGAGCCCCGAACATATTCCCGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR CCA 72 bp | GGGTGCCTTCCTACTCTATTTGTATCACCAGTGTTATaGTTGTTGGTGAAGATATCAAATTGGAAAGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GCLPTLFVSPVL*LLVKISNWKGE Trigger: CTCCCCTTTCCAATTTGATATCTTCACCAACAACCATAACACTGGTGATACAAATAGAGTAGGAAGGCACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTGTACACATTAACATTGTGCACACAGGTCAGGCAGGTTCAAGTTCAAACAGGCCTAGTTGGGCTTTaGCTGTTTTGTTTTCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: MLYTLTLCTQVRQVQVQTGLVGL*LFCFLA Trigger: AGCAAGAAAACAAAACAGCAAAAGCCCAACTAGGCC...TGTTTGAACTTGAACCTGCCTGACCTGTGTGCACAATGTTAATGTGTACAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR-3UTR CAA 90 bp | AATTCCCTCTCATGCCATCATTTCTTCTGGATCAAACAGCATCAAGTAAGCAAATTGTACACATTAACATaGTGCACACAGGTCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NSLSCHHFFWIKQHQVSKLYTLT*CTQVRQ Trigger: CTGCCTGACCTGTGTGCACAATGTTAATGTGTACAA...TTTGCTTACTTGATGCTGTTTGATCCAGAAGAAATGATGGCATGAGAGGGAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTGTACACATTAACATTGTGCACACAGGTCAGGCAGGTTCAAGTTCAAACAACAAGGTTACTCTTCTaGTGCAGAGACATGAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: MLYTLTLCTQVRQVQVQTTRLLF*CRDMKL Trigger: CAATTTCATGTCTCTGCACAAGAAGAGTAACCTTGT...TGTTTGAACTTGAACCTGCCTGACCTGTGTGCACAATGTTAATGTGTACAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTGTACACATTAACATTGTGCACACAGGTCAGGCAGGTTCAAGTTCAAACATCTTCTTATCTCTCATaGTATAGTGCCTGCTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: MLYTLTLCTQVRQVQVQTSSYLS*YSACFF Trigger: AAAGAAGCAGGCACTATACAATGAGAGATAAGAAGA...TGTTTGAACTTGAACCTGCCTGACCTGTGTGCACAATGTTAATGTGTACAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR GCA 72 bp | CTTGTGCATTCAAAACTCCTTCTTATTAGACACAAATaGCTATTCCATGTTGTGACCATCAAAATGGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LVHSKLLLIRHK*LFHVVTIKMAL Trigger: TAGGGCCATTTTGATGGTCACAACATGGAATAGGCATTTGTGTCTAATAAGAAGGAGTTTTGAATGCACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR TCA 72 bp | ACATGGGTAAAAATTTTCCACACAAAGGAACTCAAGTaGGTGAAATCCTTACAGGTTGTACACCATCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TWVKIFHTKELK*VKSLQVVHHQR Trigger: TCTTTGATGGTGTACAACCTGTAAGGATTTCACTCACTTGAGTTCCTTTGTGTGGAAAATTTTTACCCATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR TCA 72 bp | TCCTTCTTATTAGACACAAATGCCTATTCCATGTTGTaGCCATCAAAATGGCCCTACTTATCACTAAGTATC | + |
|
Preference number: 3 (lower is better) Translates to: SFLLDTNAYSML*PSKWPYLSLSI Trigger: GATACTTAGTGATAAGTAGGGCCATTTTGATGGTCACAACATGGAATAGGCATTTGTGTCTAATAAGAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR TCA 72 bp | TTGGGATATGCCATTAACATAATCATGACTTGGTCATaGGGCAATCATTTATTTACTCTAGAAGTGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGYAINIIMTWS*GNHLFTLEVSW Trigger: CCAGCTCACTTCTAGAGTAAATAAATGATTGCCTCATGACCAAGTCATGATTATGTTAATGGCATATCCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR CCA 72 bp | TTGAAATCTAATTCCCTCTCATGCCATCATTTCTTCTaGATCAAACAGCATCAAGTAAGCAAAAAGCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKSNSLSCHHFF*IKQHQVSKKQK Trigger: CTTCTGCTTTTTGCTTACTTGATGCTGTTTGATCCAGAAGAAATGATGGCATGAGAGGGAATTAGATTTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR TCA 72 bp | ACAGACATTGAATATAAGGTCTTTTCCTCTTGGGGTTaGCACAGTAAACTAATTGAGACTCCAAATGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TDIEYKVFSSWG*HSKLIETPNEK Trigger: TTTCTCATTTGGAGTCTCAATTAGTTTACTGTGTCAACCCCAAGAGGAAAAGACCTTATATTCAATGTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCAGTGCTCTAGGTGTGACCCCTACGATGAACTaGCAGAAGAGAATGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGCDSIARHWLCCSALGVTPTMN*QKRMAG Trigger: CCCAGCCATTCTCTTCTGGCAGTTCATCGTAGGGGT...CACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCAGTGCTCTAGGTGTGTTTCTTTTCCCGGGATaGAGGAGGCTTCTTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGCDSIARHWLCCSALGVFLFPG*RRLLFG Trigger: GCCAAAAAGAAGCCTCCTCCATCCCGGGAAAAGAAA...CACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR GCA 90 bp | CATAGCCTCTCAAGTAGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCCAGCTGCAATCATCATaGCTGCCATTTTTGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSLSSRGCDSIARHWLCCQLQSS*LPFLWS Trigger: GGACCACAAAAATGGCAGGCATGATGATTGCAGCTG...GCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCTACTTGAGAGGCTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR GCA 90 bp | CATAGCCTCTCAAGTAGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCATTGGGGATGCAGGGTaGACAGAAGGTATTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSLSSRGCDSIARHWLCCIGDAG*TEGIDE Trigger: CTCATCAATACCTTCTGTGCACCCTGCATCCCCAAT...GCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCTACTTGAGAGGCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR CCA 90 bp | GACCTTCTGTCTTCTCATCTCAAACTTCATCTTGCCTCAGTGAACTTTCTCCAGGGAGACACCGGGTCTTaGTTGGCCACTGGTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLLSSHLKLHLASVNFLQGDTGS*LATGSF Trigger: GAAGGAACCAGTGGCCAACCAAGACCCGGTGTCTCC...CTGGAGAAAGTTCACTGAGGCAAGATGAAGTTTGAGATGAGAAGACAGAAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR CCA 90 bp | GCATTGCCGGGAATATGTTCGGGGCTCTCCATACCATCTCTGCATCCTATTAGAAGTGGCCCAGGGAAGTaGAAACCGTGTTTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALPGICSGLSIPSLHPIRSGPGK*KPCFHP Trigger: AGGATGAAAACACGGTTTCCACTTCCCTGGGCCACT...TCTAATAGGATGCAGAGATGGTATGGAGAGCCCCGAACATATTCCCGGCAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR CAA 72 bp | CAAAAGAACTCTGGTAGCTCTGAGGACTACACGCTGTaGAACCTGCCTTGCAATACTCATGGAATGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QKNSGSSEDYTL*NLPCNTHGMAE Trigger: CTCCGCCATTCCATGAGTATTGCAAGGCAGGTTCAACAGCGTGTAGTCCTCAGAGCTACCAGAGTTCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTGTACACATTAACATTGTGCACACAGGTCAGGCAGGTTCAAGTTCAAACACTGGGGCCCAGAGGATaGAGGAAAGAACCCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MLYTLTLCTQVRQVQVQTLGPRG*RKEPTQ Trigger: CTGCGTGGGTTCTTTCCTTCATCCTCTGGGCCCCAG...TGTTTGAACTTGAACCTGCCTGACCTGTGTGCACAATGTTAATGTGTACAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR GCA 90 bp | CATAGCCTCTCAAGTAGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCTGCAATCATCATGCCTaGCATTTTTGTGGTCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSLSSRGCDSIARHWLCCCNHHA*HFCGPL Trigger: AAGCGGACCACAAAAATGGCAGGCATGATGATTGCA...GCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCTACTTGAGAGGCTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAACAGATCGCCCTTCTGACCTTCTGTCTTCTCATCTCAAACTTCATCTTGCGTCCCGCGGAGCCTTaGCATTCTGGATCTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FKQIALLTFCLLISNFILRPAEP*HSGSCC Trigger: ACAACAAGATCCAGAATGGCAAGGCTCCGCGGGACG...CAAGATGAAGTTTGAGATGAGAAGACAGAAGGTCAGAAGGGCGATCTGTTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAACAGATCGCCCTTCTGACCTTCTGTCTTCTCATCTCAAACTTCATCTTGTCTTTCTCCTCCCCCTaGACGCAGTTTTCAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FKQIALLTFCLLISNFILSFSSP*TQFSVP Trigger: TGGGACTGAAAACTGCGTTCAGGGGGAGGAGAAAGA...CAAGATGAAGTTTGAGATGAGAAGACAGAAGGTCAGAAGGGCGATCTGTTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR GCA 90 bp | GACCTTCTGTCTTCTCATCTCAAACTTCATCTTGCCTCAGTGAACTTTCTCCAGTCTTTATTCTGCTCTTaGTCGCCCGGGATATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DLLSSHLKLHLASVNFLQSLFCS*SPGICA Trigger: GGCACATATCCCGGGCGAGCAAGAGCAGAATAAAGA...CTGGAGAAAGTTCACTGAGGCAAGATGAAGTTTGAGATGAGAAGACAGAAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAACAGATCGCCCTTCTGACCTTCTGTCTTCTCATCTCAAACTTCATCTTGGGAGCCTTGCCATTCTaGATCTTGTTGTGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKQIALLTFCLLISNFILGALPF*ILLCSR Trigger: CCTGGAGCACAACAAGATCCAGAATGGCAAGGCTCC...CAAGATGAAGTTTGAGATGAGAAGACAGAAGGTCAGAAGGGCGATCTGTTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR CCA 90 bp | GCATTGCCGGGAATATGTTCGGGGCTCTCCATACCATCTCTGCATCCTATTAGATTTTGGCAGGCTGCTTaGTCATCTTCACAATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALPGICSGLSIPSLHPIRFWQAA*SSSQFC Trigger: GCAAAATTGTGAAGATGACCAAGCAGCCTGCCAAAA...TCTAATAGGATGCAGAGATGGTATGGAGAGCCCCGAACATATTCCCGGCAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAACAGATCGCCCTTCTGACCTTCTGTCTTCTCATCTCAAACTTCATCTTGTCCTTACCCCTACGATaGACTGCCAGAAGAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: FKQIALLTFCLLISNFILSLPLR*TARREW Trigger: CCATTCTCTTCTGGCAGTTCATCGTAGGGGTAAGGA...CAAGATGAAGTTTGAGATGAGAAGACAGAAGGTCAGAAGGGCGATCTGTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR GCA 90 bp | AATTCCCTCTCATGCCATCATTTCTTCTGGATCAAACAGCATCAAGTAAGCAAAAAGAACCCACGCAGCTaGAATCATCATGCCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSLSCHHFFWIKQHQVSKKNPRS*NHHACH Trigger: ATGGCAGGCATGATGATTGCAGCTGCGTGGGTTCTT...TTTGCTTACTTGATGCTGTTTGATCCAGAAGAAATGATGGCATGAGAGGGAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR GCA 90 bp | AATTCCCTCTCATGCCATCATTTCTTCTGGATCAAACAGCATCAAGTAAGCAAATTCTGGATCTTGTTGTaGTCCAGGCCACCATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLSCHHFFWIKQHQVSKFWILL*SRPPSP Trigger: TGGTGATGGTGGCCTGGAGCACAACAAGATCCAGAA...TTTGCTTACTTGATGCTGTTTGATCCAGAAGAAATGATGGCATGAGAGGGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTGTACACATTAACATTGTGCACACAGGTCAGGCAGGTTCAAGTTCAAACAACAAGAAGTAATTGTTaGCAGTCTGAAGGTGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: MLYTLTLCTQVRQVQVQTTRSNC*QSEGGG Trigger: ACCGCCACCTTCAGACTGTCAACAATTACTTCTTGT...TGTTTGAACTTGAACCTGCCTGACCTGTGTGCACAATGTTAATGTGTACAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR GCA 90 bp | GACCTTCTGTCTTCTCATCTCAAACTTCATCTTGCCTCAGTGAACTTTCTCCAGTCATCTTCACAATTTTaGGGGCTACAATGTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLLSSHLKLHLASVNFLQSSSQF*GLQCSA Trigger: AGCAGAACATTGTAGCCCGCAAAATTGTGAAGATGA...CTGGAGAAAGTTCACTGAGGCAAGATGAAGTTTGAGATGAGAAGACAGAAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR GCA 90 bp | GACCTTCTGTCTTCTCATCTCAAACTTCATCTTGCCTCAGTGAACTTTCTCCAGTTCTTTTTGGCAGGCTaGTTGGTCATCTTCACAATT | + |
|
Preference number: 4 (lower is better) Translates to: DLLSSHLKLHLASVNFLQFFLAG*LVIFTI Trigger: AATTGTGAAGATGACCAAGCAGCCTGCCAAAAAGAA...CTGGAGAAAGTTCACTGAGGCAAGATGAAGTTTGAGATGAGAAGACAGAAGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTGTACACATTAACATTGTGCACACAGGTCAGGCAGGTTCAAGTTCAAACAACCGTGTTTTCATCCTaGGTTATCTCATCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MLYTLTLCTQVRQVQVQTTVFSS*VISSSL Trigger: GAGAGATGATGAGATAACCCAGGATGAAAACACGGT...TGTTTGAACTTGAACCTGCCTGACCTGTGTGCACAATGTTAATGTGTACAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR TCA 90 bp | CCACACAAAGGAACTCAAGTGAGTGAAATCCTTACAGGTTGTACACCATCAAAGAGGTTAGAGGTTTTGTaGCACAGAAGTATCTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PHKGTQVSEILTGCTPSKRLEVL*HRSIYQ Trigger: TTGATAGATACTTCTGTGTCACAAAACCTCTAACCT...CTTTGATGGTGTACAACCTGTAAGGATTTCACTCACTTGAGTTCCTTTGTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR GCA 90 bp | AATTTTCCACACAAAGGAACTCAAGTGAGTGAAATCCTTACAGGTTGTACACCATTTCTTTCTTTATTCTaGTCTTGCTCGCCCGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: NFPHKGTQVSEILTGCTPFLSLF*SCSPGI Trigger: TATCCCGGGCGAGCAAGAGCAGAATAAAGAAAGAAA...TGGTGTACAACCTGTAAGGATTTCACTCACTTGAGTTCCTTTGTGTGGAAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR GCA 90 bp | AATTCCCTCTCATGCCATCATTTCTTCTGGATCAAACAGCATCAAGTAAGCAAATTTACAATTCTTCCTTaGACTAGACTCGGAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: NSLSCHHFFWIKQHQVSKFTILP*TRLGDT Trigger: GGTGTCTCCGAGTCTAGTGCAAGGAAGAATTGTAAA...TTTGCTTACTTGATGCTGTTTGATCCAGAAGAAATGATGGCATGAGAGGGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR CAA 72 bp | TGCCTTCCTACTCTATTTGTATCACCAGTGTTATGGTaGTTGGTGAAGATATCAAATTGGAAAGGGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CLPTLFVSPVLW*LVKISNWKGEQ Trigger: TTGCTCCCCTTTCCAATTTGATATCTTCACCAACAACCATAACACTGGTGATACAAATAGAGTAGGAAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR CAA 72 bp | ACAGTTTCTCTTTTAAGATGTGGTAGCTGTGGCAAATaGCTAGGCACAGAAAGAATCAAGGAAAGATTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TVSLLRCGSCGK*LGTERIKERLQ Trigger: CTGTAATCTTTCCTTGATTCTTTCTGTGCCTAGCAATTTGCCACAGCTACCACATCTTAAAAGAGAAACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| 3UTR CAA 72 bp | ATCACCAGTGTTATGGTTGTTGGTGAAGATATCAAATaGGAAAGGGGAGCAACAGTGGATGAACTAAATACA | + |
|
Preference number: 4 (lower is better) Translates to: ITSVMVVGEDIK*ERGATVDELNT Trigger: TGTATTTAGTTCATCCACTGTTGCTCCCCTTTCCAATTTGATATCTTCACCAACAACCATAACACTGGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR GCA 90 bp | AATTCCCTCTCATGCCATCATTTCTTCTGGATCAAACAGCATCAAGTAAGCAAAATTTTGATGCATGTCTaGCTAGAGTTGTCATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSLSCHHFFWIKQHQVSKILMHV*LELSSL Trigger: CAAAGATGACAACTCTAGGCAGACATGCATCAAAAT...TTTGCTTACTTGATGCTGTTTGATCCAGAAGAAATGATGGCATGAGAGGGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS GCA 90 bp | CCTCCCCCTGAACGCAGTTTTCAGTCCCACCGTCCCGCGGAGCCTTaGCATTCTGGATCTTGTTGTGCTCCAGGCCACCATCACCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPPERSFQSHRPAEP*HSGSCCAPGHHHHQ Trigger: CTGGTGGTGATGGTGGCCTGGAGCACAACAAGATCCAGAATGGCAAGGCTCCGCGGGACGGTGGGACTGAAAACTGCGTTCAGGGGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS TCA 90 bp | GCACTGACAGACGTGGAGTCGTTGGAGCTTTCTTTCTCCTCCCCCTaGACGCAGTTTTCAGTCCCACCGTCCCGCGGAGCCTTGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: ALTDVESLELSFSSP*TQFSVPPSRGALPF Trigger: GAATGGCAAGGCTCCGCGGGACGGTGGGACTGAAAACTGCGTTCAGGGGGAGGAGAAAGAAAGCTCCAACGACTCCACGTCTGTCAGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS GCA 90 bp | TCAGTCCCACCGTCCCGCGGAGCCTTGCCATTCTGGATCTTGTTGTaGTCCAGGCCACCATCACCACCAGGCATGTTGTTGTTGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SVPPSRGALPFWILL*SRPPSPPGMLLLFG Trigger: GCCAAACAACAACAACATGCCTGGTGGTGATGGTGGCCTGGAGCACAACAAGATCCAGAATGGCAAGGCTCCGCGGGACGGTGGGACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS TCA 90 bp | CATCCTGGGTTATCTCATCATCTCTCATGTTGGAGGCCACGGCACTaGCAGACGTGGAGTCGTTGGAGCTTTCTTTCTCCTCCCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HPGLSHHLSCWRPRH*QTWSRWSFLSPPPE Trigger: TTCAGGGGGAGGAGAAAGAAAGCTCCAACGACTCCACGTCTGTCAGTGCCGTGGCCTCCAACATGAGAGATGATGAGATAACCCAGGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCAGTGCTCTAGGTGTGTTCTTTATTCTGCTCTaGCTCGCCCGGGATATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGCDSIARHWLCCSALGVFFILL*LARDMC Trigger: GCACATATCCCGGGCGAGCAAGAGCAGAATAAAGAA...CACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR CAA 90 bp | CATAGCCTCTCAAGTAGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCTCATCATCTCTCATGTaGGAGGCCACGGCACTGACA | + |
|
Preference number: 5 (lower is better) Translates to: HSLSSRGCDSIARHWLCCSSSLM*EATALT Trigger: TGTCAGTGCCGTGGCCTCCAACATGAGAGATGATGA...GCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCTACTTGAGAGGCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
||
| CDS-3UTR CAA 90 bp | CAGCGTGTCTCTTTCATTGTCTCGGTGCGCCTAAACGGACAGGGTTTATACGGTAGAGCCAGTAGCCAATaGTCCACACTGTATTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QRVSFIVSVRLNGQGLYGRASSQ*STLYWG Trigger: TCCCCAATACAGTGTGGACAATTGGCTACTGGCTCT...ACCGTATAAACCCTGTCCGTTTAGGCGCACCGAGACAATGAAAGAGACACGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS GCA 90 bp | CATGCGTCACCCTTTTGGGTCTTGGTGACAATTTTGATGCATGTCTaGCTAGAGTTGTCATCTTTGGAGTGGCCCAGGGAAGTGGAAACC | + |
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Preference number: 5 (lower is better) Translates to: HASPFWVLVTILMHV*LELSSLEWPREVET Trigger: GGTTTCCACTTCCCTGGGCCACTCCAAAGATGACAACTCTAGGCAGACATGCATCAAAATTGTCACCAAGACCCAAAAGGGTGACGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | CCACACAAAGGAACTCAAGTGAGTGAAATCCTTACAGGTTGTACACCATCAAAGCCGTCCCGCGGAGCCTaGCCATTCTGGATCTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: PHKGTQVSEILTGCTPSKPSRGA*PFWILL Trigger: CAACAAGATCCAGAATGGCAAGGCTCCGCGGGACGG...CTTTGATGGTGTACAACCTGTAAGGATTTCACTCACTTGAGTTCCTTTGTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | AGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCAGTGCTCTAGGTGTGGTCTTGGTGACAATTTaGATGCATGTCTGCCTAGAG | + |
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Preference number: 5 (lower is better) Translates to: RGCDSIARHWLCCSALGVVLVTI*MHVCLE Trigger: CTCTAGGCAGACATGCATCAAAATTGTCACCAAGAC...CACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | AGGGGCTGTGATTCCATAGCCAGGCATTGGTTATGCTGCAGTGCTCTAGGTGTGGTCATCTTCACAATTTaGCGGGCTACAATGTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: RGCDSIARHWLCCSALGVVIFTI*RATMFC Trigger: GCAGAACATTGTAGCCCGCAAAATTGTGAAGATGAC...CACACCTAGAGCACTGCAGCATAACCAATGCCTGGCTATGGAATCACAGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS CCA 90 bp | CAACAGGATAGCCAAGATTGTCCTGGTCACTTTCTTTTCCCGGGATaGAGGAGGCTTCTTTTTGGCAGGCTGCTTGGTCATCTTCACAAT | + |
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Preference number: 5 (lower is better) Translates to: QQDSQDCPGHFLFPG*RRLLFGRLLGHLHN Trigger: ATTGTGAAGATGACCAAGCAGCCTGCCAAAAAGAAGCCTCCTCCATCCCGGGAAAAGAAAGTGACCAGGACAATCTTGGCTATCCTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS CCA 90 bp | GGCTTTACAATTCTTCCTTGCACTAGACTCGGAGACACCGGGTCTTaGTTGGCCACTGGTTCCTTCTTTTCTTTCTTTATTCTGCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: GFTILPCTRLGDTGS*LATGSFFSFFILLL Trigger: CAAGAGCAGAATAAAGAAAGAAAAGAAGGAACCAGTGGCCAACCAAGACCCGGTGTCTCCGAGTCTAGTGCAAGGAAGAATTGTAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | CCACACAAAGGAACTCAAGTGAGTGAAATCCTTACAGGTTGTACACCATCAAAGCCATTCTGGATCTTGTaGTGCTCCAGGCCACCATCA | + |
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Preference number: 5 (lower is better) Translates to: PHKGTQVSEILTGCTPSKPFWIL*CSRPPS Trigger: TGATGGTGGCCTGGAGCACAACAAGATCCAGAATGG...CTTTGATGGTGTACAACCTGTAAGGATTTCACTCACTTGAGTTCCTTTGTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | CCACACAAAGGAACTCAAGTGAGTGAAATCCTTACAGGTTGTACACCATCAAAGATGAGCACCATGACATaGTATGGCGCCCACGTGATG | + |
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Preference number: 5 (lower is better) Translates to: PHKGTQVSEILTGCTPSKMSTMT*YGAHVM Trigger: CATCACGTGGGCGCCATACAATGTCATGGTGCTCAT...CTTTGATGGTGTACAACCTGTAAGGATTTCACTCACTTGAGTTCCTTTGTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS TCA 90 bp | TTCACAATTTTGCGGGCTACAATGTTCTGCTTTTCATCACCATTCTaGCCTGACGATCCCACTAGTTCTACTGTGGTACTTGTTGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: FTILRATMFCFSSPF*PDDPTSSTVVLVGV Trigger: CACACCAACAAGTACCACAGTAGAACTAGTGGGATCGTCAGGTCAGAATGGTGATGAAAAGCAGAACATTGTAGCCCGCAAAATTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | AATTTTCCACACAAAGGAACTCAAGTGAGTGAAATCCTTACAGGTTGTACACCATTGCCATTCTGGATCTaGTTGTGCTCCAGGCCACCA | + |
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Preference number: 5 (lower is better) Translates to: NFPHKGTQVSEILTGCTPLPFWI*LCSRPP Trigger: TGGTGGCCTGGAGCACAACAAGATCCAGAATGGCAA...TGGTGTACAACCTGTAAGGATTTCACTCACTTGAGTTCCTTTGTGTGGAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | AATTCCCTCTCATGCCATCATTTCTTCTGGATCAAACAGCATCAAGTAAGCAAACATGTCTGCCTAGAGTaGTCATCTTTGGAGTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: NSLSCHHFFWIKQHQVSKHVCLE*SSLEWP Trigger: GGGCCACTCCAAAGATGACAACTCTAGGCAGACATG...TTTGCTTACTTGATGCTGTTTGATCCAGAAGAAATGATGGCATGAGAGGGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | AATTCCCTCTCATGCCATCATTTCTTCTGGATCAAACAGCATCAAGTAAGCAAAATTGTCCACACTGTATaGGGGATGCAGGGTGCACAG | + |
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Preference number: 5 (lower is better) Translates to: NSLSCHHFFWIKQHQVSKIVHTV*GMQGAQ Trigger: CTGTGCACCCTGCATCCCCAATACAGTGTGGACAAT...TTTGCTTACTTGATGCTGTTTGATCCAGAAGAAATGATGGCATGAGAGGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | TTCAAACAGATCGCCCTTCTGACCTTCTGTCTTCTCATCTCAAACTTCATCTTGCCACCAGGCATGTTGTaGTTGTTTGGCTTTACAATT | + |
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Preference number: 5 (lower is better) Translates to: FKQIALLTFCLLISNFILPPGML*LFGFTI Trigger: AATTGTAAAGCCAAACAACAACAACATGCCTGGTGG...CAAGATGAAGTTTGAGATGAGAAGACAGAAGGTCAGAAGGGCGATCTGTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | AATTTTCCACACAAAGGAACTCAAGTGAGTGAAATCCTTACAGGTTGTACACCAGCATGCGTCACCCTTTaGGGTCTTGGTGACAATTTT | + |
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Preference number: 5 (lower is better) Translates to: NFPHKGTQVSEILTGCTPACVTL*GLGDNF Trigger: AAAATTGTCACCAAGACCCAAAAGGGTGACGCATGC...TGGTGTACAACCTGTAAGGATTTCACTCACTTGAGTTCCTTTGTGTGGAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | TTCAAACAGATCGCCCTTCTGACCTTCTGTCTTCTCATCTCAAACTTCATCTTGTTTTTGGCAGGCTGCTaGGTCATCTTCACAATTTTG | + |
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Preference number: 5 (lower is better) Translates to: FKQIALLTFCLLISNFILFLAGC*VIFTIL Trigger: CAAAATTGTGAAGATGACCAAGCAGCCTGCCAAAAA...CAAGATGAAGTTTGAGATGAGAAGACAGAAGGTCAGAAGGGCGATCTGTTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | AATTCCCTCTCATGCCATCATTTCTTCTGGATCAAACAGCATCAAGTAAGCAAAGGTGCACAGAAGGTATaGATGAGCACCATGACATTG | + |
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Preference number: 5 (lower is better) Translates to: NSLSCHHFFWIKQHQVSKGAQKV*MSTMTL Trigger: CAATGTCATGGTGCTCATCAATACCTTCTGTGCACC...TTTGCTTACTTGATGCTGTTTGATCCAGAAGAAATGATGGCATGAGAGGGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | TTGAACTTGACAGTTTCTCTTTTAAGATGTGGTAGCTGTGGCAAATTGCTAGGCTCACCCTTTTGGGTCTaGGTGACAATTTTGATGCAT | + |
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Preference number: 5 (lower is better) Translates to: LNLTVSLLRCGSCGKLLGSPFWV*VTILMH Trigger: ATGCATCAAAATTGTCACCAAGACCCAAAAGGGTGA...GCCTAGCAATTTGCCACAGCTACCACATCTTAAAAGAGAAACTGTCAAGTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS-3UTR CAA 90 bp | AATTCCCTCTCATGCCATCATTTCTTCTGGATCAAACAGCATCAAGTAAGCAAATGCTTAAAAGTCTTTTaGAAGGTGGCGTTACAAAGT | + |
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Preference number: 5 (lower is better) Translates to: NSLSCHHFFWIKQHQVSKCLKVF*KVALQS Trigger: ACTTTGTAACGCCACCTTCAAAAAGACTTTTAAGCA...TTTGCTTACTTGATGCTGTTTGATCCAGAAGAAATGATGGCATGAGAGGGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS GCA 72 bp | CCGTCCCGCGGAGCCTTGCCATTCTGGATCTTGTTGTaGTCCAGGCCACCATCACCACCAGGCATGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PSRGALPFWILL*SRPPSPPGMLL Trigger: CAACAACATGCCTGGTGGTGATGGTGGCCTGGAGCACAACAAGATCCAGAATGGCAAGGCTCCGCGGGACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS CAA 72 bp | CACACTGTATTGGGGATGCAGGGTGCACAGAAGGTATaGATGAGCACCATGACATTGTATGGCGCCCACGTG | + |
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Preference number: 6 (lower is better) Translates to: HTVLGMQGAQKV*MSTMTLYGAHV Trigger: CACGTGGGCGCCATACAATGTCATGGTGCTCATCAATACCTTCTGTGCACCCTGCATCCCCAATACAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS CAA 90 bp | GTGGAAACCGTGTTTTCATCCTGGGTTATCTCATCATCTCTCATGTaGGAGGCCACGGCACTGACAGACGTGGAGTCGTTGGAGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: VETVFSSWVISSSLM*EATALTDVESLELS Trigger: AGAAAGCTCCAACGACTCCACGTCTGTCAGTGCCGTGGCCTCCAACATGAGAGATGATGAGATAACCCAGGATGAAAACACGGTTTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS CCA 72 bp | CACCATTCTGACCTGACGATCCCACTAGTTCTACTGTaGTACTTGTTGGTGTGCATGCGTCACCCTTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: HHSDLTIPLVLL*YLLVCMRHPFG Trigger: CCCAAAAGGGTGACGCATGCACACCAACAAGTACCACAGTAGAACTAGTGGGATCGTCAGGTCAGAATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS CCA 72 bp | CCCGGGATGGAGGAGGCTTCTTTTTGGCAGGCTGCTTaGTCATCTTCACAATTTTGCGGGCTACAATGTTCT | + |
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Preference number: 6 (lower is better) Translates to: PGMEEASFWQAA*SSSQFCGLQCS Trigger: AGAACATTGTAGCCCGCAAAATTGTGAAGATGACCAAGCAGCCTGCCAAAAAGAAGCCTCCTCCATCCCGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS CAA 72 bp | GTGTTTTCATCCTGGGTTATCTCATCATCTCTCATGTaGGAGGCCACGGCACTGACAGACGTGGAGTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: VFSSWVISSSLM*EATALTDVESL Trigger: CAACGACTCCACGTCTGTCAGTGCCGTGGCCTCCAACATGAGAGATGATGAGATAACCCAGGATGAAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS CAA 72 bp | TCCCGGGATGGAGGAGGCTTCTTTTTGGCAGGCTGCTaGGTCATCTTCACAATTTTGCGGGCTACAATGTTC | + |
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Preference number: 6 (lower is better) Translates to: SRDGGGFFLAGC*VIFTILRATMF Trigger: GAACATTGTAGCCCGCAAAATTGTGAAGATGACCAAGCAGCCTGCCAAAAAGAAGCCTCCTCCATCCCGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS CAA 90 bp | CTTGTTGGTGTGCATGCGTCACCCTTTTGGGTCTTGGTGACAATTTaGATGCATGTCTGCCTAGAGTTGTCATCTTTGGAGTGGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LVGVHASPFWVLVTI*MHVCLELSSLEWPR Trigger: CCTGGGCCACTCCAAAGATGACAACTCTAGGCAGACATGCATCAAAATTGTCACCAAGACCCAAAAGGGTGACGCATGCACACCAACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS TCA 72 bp | TTATCTCATCATCTCTCATGTTGGAGGCCACGGCACTaGCAGACGTGGAGTCGTTGGAGCTTTCTTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LSHHLSCWRPRH*QTWSRWSFLSP Trigger: AGGAGAAAGAAAGCTCCAACGACTCCACGTCTGTCAGTGCCGTGGCCTCCAACATGAGAGATGATGAGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS CAA 72 bp | GTCTTGGTGACAATTTTGATGCATGTCTGCCTAGAGTaGTCATCTTTGGAGTGGCCCAGGGAAGTGGAAACC | + |
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Preference number: 6 (lower is better) Translates to: VLVTILMHVCLE*SSLEWPREVET Trigger: GGTTTCCACTTCCCTGGGCCACTCCAAAGATGACAACTCTAGGCAGACATGCATCAAAATTGTCACCAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS CAA 72 bp | GTGCATGCGTCACCCTTTTGGGTCTTGGTGACAATTTaGATGCATGTCTGCCTAGAGTTGTCATCTTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: VHASPFWVLVTI*MHVCLELSSLE Trigger: CTCCAAAGATGACAACTCTAGGCAGACATGCATCAAAATTGTCACCAAGACCCAAAAGGGTGACGCATGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS CAA 72 bp | TACTGTGGTACTTGTTGGTGTGCATGCGTCACCCTTTaGGGTCTTGGTGACAATTTTGATGCATGTCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: YCGTCWCACVTL*GLGDNFDACLP Trigger: AGGCAGACATGCATCAAAATTGTCACCAAGACCCAAAAGGGTGACGCATGCACACCAACAAGTACCACAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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| CDS CAA 72 bp | TTCTTTTTGGCAGGCTGCTTGGTCATCTTCACAATTTaGCGGGCTACAATGTTCTGCTTTTCATCACCATTC | + |
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Preference number: 6 (lower is better) Translates to: FFLAGCLVIFTI*RATMFCFSSPF Trigger: GAATGGTGATGAAAAGCAGAACATTGTAGCCCGCAAAATTGTGAAGATGACCAAGCAGCCTGCCAAAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172278.8 |
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