Pregenerated sensors for CHPT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060002Ensembl transcript IDs: ENSMUST00000020253.15, ENSMUST00000073783.6, ENSMUST00000117440.8, ENSMUST00000117579.8, ENSMUST00000126074.8, ENSMUST00000139109.8, ENSMUST00000143108.8, ENSMUST00000148899.8
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATGACCGCCTGGCTGTTCTACCACCAGCCAGTGGGAACCCAAACTaGACCAAGTCTCAGTGCACACATGGAGTGGTCTTCAAGATGCTC | + |
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Preference number: 1 (lower is better) Translates to: HDRLAVLPPASGNPN*TKSQCTHGVVFKML Trigger: GAGCATCTTGAAGACCACTCCATGTGTGCACTGAGACTTGGTGCAGTTTGGGTTCCCACTGGCTGGTGGTAGAACAGCCAGGCGGTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| 3UTR CCA 90 bp | ACCTCAGCCTCCCAAGTAGCAGGAACAAAGGCATGCCATCACGCGTaGCTTATACTGTACTCCTTTAAGGAAAGAACCTTACAGAATCGG | + |
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Preference number: 1 (lower is better) Translates to: TSASQVAGTKACHHA*LILYSFKERTLQNR Trigger: CCGATTCTGTAAGGTTCTTTCCTTAAAGGAGTACAGTATAAGCCACGCGTGATGGCATGCCTTTGTTCCTGCTACTTGGGAGGCTGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020253.15 ENSMUST00000143108.8 |
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| 3UTR CCA 90 bp | GGACAGTCCAATTCTTTAATTCCTTTTTATTTGAGGTGGGTGGGGTaGGTGTTGCTAGTAGATCAAGCCGGGTCCTCACCCATGTTAAGC | + |
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Preference number: 1 (lower is better) Translates to: GQSNSLIPFYLRWVG*VLLVDQAGSSPMLS Trigger: GCTTAACATGGGTGAGGACCCGGCTTGATCTACTAGCAACACCCACCCCACCCACCTCAAATAAAAAGGAATTAAAGAATTGGACTGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020253.15 ENSMUST00000143108.8 |
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| 3UTR TCA 90 bp | GCTGGCTTCAAACTCACAGAGATTCTTTTGCCTTTTCTTCCCAAGTaGTGGTGTCAAATGTGTGTGCCACCACACCCAGCTAACTTACGT | + |
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Preference number: 1 (lower is better) Translates to: AGFKLTEILLPFLPK*WCQMCVPPHPANLR Trigger: ACGTAAGTTAGCTGGGTGTGGTGGCACACACATTTGACACCATCACTTGGGAAGAAAAGGCAAAAGAATCTCTGTGAGTTTGAAGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR GCA 90 bp | GAAATCCTGACGTTGGCAACAATGAATGGGAGGGCTCCAGATGTTTaGTTTTACATGATGTTCAGCAGAGCTGTTCGGTCCAAGAACACA | + |
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Preference number: 1 (lower is better) Translates to: EILTLATMNGRAPDV*FYMMFSRAVRSKNT Trigger: TGTGTTCTTGGACCGAACAGCTCTGCTGAACATCATGTAAAAGCAAACATCTGGAGCCCTCCCATTCATTGTTGCCAACGTCAGGATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| 3UTR TCA 90 bp | AAGAAAGAACTTGAACCTGTTCCGGTGCTTGTTGACATGAAGTCTTaGAGATGTTTAGATGAAGGTGTCTTGAAATTTGCAGGCACAAAG | + |
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Preference number: 1 (lower is better) Translates to: KKELEPVPVLVDMKS*RCLDEGVLKFAGTK Trigger: CTTTGTGCCTGCAAATTTCAAGACACCTTCATCTAAACATCTTCAAGACTTCATGTCAACAAGCACCGGAACAGGTTCAAGTTCTTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126074.8 |
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| 3UTR TCA 90 bp | CAATATGCTTGTAAACCTGTTCCGGTGCTTGTTGACATGAAGTCTTaGAGATGTTTAGATGAAGGTGTCTTGAAATTTGCAGGCACAAAG | + |
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Preference number: 1 (lower is better) Translates to: QYACKPVPVLVDMKS*RCLDEGVLKFAGTK Trigger: CTTTGTGCCTGCAAATTTCAAGACACCTTCATCTAAACATCTTCAAGACTTCATGTCAACAAGCACCGGAACAGGTTTACAAGCATATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143108.8 |
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| 3UTR-3UTR TCA 90 bp | TACCACCAGCCAGTGGGAACCCAAACTGCACCAAGTCTCAGTGCACACATGGAGCAAGAACACAGAGGATaGAGTTTGACTTCACAGACC | + |
|
Preference number: 2 (lower is better) Translates to: YHQPVGTQTAPSLSAHMEQEHRG*SLTSQT Trigger: GGTCTGTGAAGTCAAACTTCATCCTCTGTGTTCTTG...CTCCATGTGTGCACTGAGACTTGGTGCAGTTTGGGTTCCCACTGGCTGGTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| 3UTR-3UTR TCA 90 bp | CTACCACCAGCCAGTGGGAACCCAAACTGCACCAAGTCTCAGTGCACACATGGAGACCTTCATAGACTTTaGTTACCAGAAGAGGGCATA | + |
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Preference number: 2 (lower is better) Translates to: LPPASGNPNCTKSQCTHGDLHRL*LPEEGI Trigger: TATGCCCTCTTCTGGTAATCAAAGTCTATGAAGGTC...TCCATGTGTGCACTGAGACTTGGTGCAGTTTGGGTTCCCACTGGCTGGTGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| 3UTR CAA 90 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTATGGAAGAGAAGTCAGTGCTCTTAACGGCT | + |
|
Preference number: 2 (lower is better) Translates to: DPITDGCEPPCGCWE*NSGPMEEKSVLLTA Trigger: AGCCGTTAAGAGCACTGACTTCTCTTCCATAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTAGTCTTTTCTACATGTATTCCCAGTGTGTTTTCAATAGGAAGCAACCAAAATCTGCCCGCCTCTaGCTCCCCGAGTGCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: FCSLFYMYSQCVFNRKQPKSARL*LPECWD Trigger: ATCCCAGCACTCGGGGAGGCAGAGGCGGGCAGATTT...TGGTTGCTTCCTATTGAAAACACACTGGGAATACATGTAGAAAAGACTACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTTCTACGTGGTAGCAGGCTATAAAAGCAGCATGAAAAAGAGAACTCCCGAATGCACCAAGTCTCAGTaGACACATGGAGTGGTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: EFYVVAGYKSSMKKRTPECTKSQ*THGVVF Trigger: GAAGACCACTCCATGTGTGCACTGAGACTTGGTGCA...TTCGGGAGTTCTCTTTTTCATGCTGCTTTTATAGCCTGCTACCACGTAGAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| 3UTR CAA 90 bp | TCCAATTCTTTAATTCCTTTTTATTTGAGGTGGGTGGGGTGGGTGTaGCTAGTAGATCAAGCCGGGTCCTCACCCATGTTAAGCTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: SNSLIPFYLRWVGWV*LVDQAGSSPMLSLA Trigger: AGCTAAGCTTAACATGGGTGAGGACCCGGCTTGATCTACTAGCAACACCCACCCCACCCACCTCAAATAAAAAGGAATTAAAGAATTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020253.15 ENSMUST00000143108.8 |
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| 3UTR-3UTR TCA 90 bp | TACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTACAAGACCAGGCTGGCCTTaGACTCAGAAATCTGCCCGC | + |
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Preference number: 2 (lower is better) Translates to: YCPQRSEKGSRFFKTKVTRPGWP*TQKSAR Trigger: GCGGGCAGATTTCTGAGTTCAAGGCCAGCCTGGTCT...TGTAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTTTCGTCATGTGAGCTATCACCAATTTTTGTGCAACTTTAGCAAAGACACATATGTGGAGTCCAGGTaGCAAGACACTGGTGCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: TFRHVSYHQFLCNFSKDTYVESR*QDTGAC Trigger: GCAGGCACCAGTGTCTTGTCACCTGGACTCCACATA...TGTGTCTTTGCTAAAGTTGCACAAAAATTGGTGATAGCTCACATGACGAAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
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| 3UTR-3UTR GCA 90 bp | TACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTACATTGAACTCAGAAATCTaGCCGCCTCTGCCTCCCCGA | + |
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Preference number: 2 (lower is better) Translates to: YCPQRSEKGSRFFKTKVTLNSEI*PPLPPR Trigger: TCGGGGAGGCAGAGGCGGGCAGATTTCTGAGTTCAA...TGTAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR-3UTR GCA 90 bp | TTTACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTAAGGCGTGCGCCACCATaGCCAGCTAAGTTCCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: FTAHRGQKRVVDSLKLKLRRAPP*PAKFPF Trigger: AAAAGGGAACTTAGCTGGGCATGGTGGCGCACGCCT...TAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTGTAGTCTTTTCTACATGTATTCCCAGTGTGTTTTCAATAGGAAGCAACCACCTACCTTTGTCTCCTaGGTGCTGGGATTAAAACCC | + |
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Preference number: 2 (lower is better) Translates to: FCSLFYMYSQCVFNRKQPPTFVS*VLGLKP Trigger: GGGTTTTAATCCCAGCACTCAGGAGACAAAGGTAGG...TGGTTGCTTCCTATTGAAAACACACTGGGAATACATGTAGAAAAGACTACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTTCTACGTGGTAGCAGGCTATAAAAGCAGCATGAAAAAGAGAACTCCCGAAATGTTTGCTTTTACATaGTGTTCAGCAGAGCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: EFYVVAGYKSSMKKRTPEMFAFT*CSAELF Trigger: GAACAGCTCTGCTGAACATCATGTAAAAGCAAACAT...TTCGGGAGTTCTCTTTTTCATGCTGCTTTTATAGCCTGCTACCACGTAGAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| 3UTR-3UTR CCA 90 bp | TACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTACACCACCATGTGGTTGCTaGGAATTGAACTCAGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: YCPQRSEKGSRFFKTKVTPPCGC*ELNSGP Trigger: AGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGG...TGTAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGAAGAGTTCTACGTGGTAGCAGGCTATAAAAGCAGCATGAAAAAGAGAACTAGGGCTCCAGATGTTTaGTTTTACATGATGTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LEEFYVVAGYKSSMKKRTRAPDV*FYMMFS Trigger: GCTGAACATCATGTAAAAGCAAACATCTGGAGCCCT...AGTTCTCTTTTTCATGCTGCTTTTATAGCCTGCTACCACGTAGAACTCTTCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTGAGCCATCTCTTGCCCCTAAGATATGTTCTTATAAACCATAATTTAAGTAGCAGCAGCAAGAGATaGCAAATGTTCGAAAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: PLSHLLPLRYVLINHNLSSSSKR*QMFESL Trigger: GAGACTTTCGAACATTTGCCATCTCTTGCTGCTGCT...ACTTAAATTATGGTTTATAAGAACATATCTTAGGGGCAAGAGATGGCTCAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR-3UTR TCA 90 bp | TACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTACAAAAACATCTCCTTCCTaGGTGGTAGTTGTCCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: YCPQRSEKGSRFFKTKVTKTSPS*VVVVLL Trigger: TAGAAGGACAACTACCACTCAGGAAGGAGATGTTTT...TGTAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR-3UTR TCA 90 bp | CCACTGAGCCATCTCTTGCCCCTAAGATATGTTCTTATAAACCATAATTTAAGTATAGGAAGTTTGAGGTaGGCCTTGCCTTTATATTAT | + |
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Preference number: 2 (lower is better) Translates to: PLSHLLPLRYVLINHNLSIGSLR*ALPLYY Trigger: ATAATATAAAGGCAAGGCTCACCTCAAACTTCCTAT...ACTTAAATTATGGTTTATAAGAACATATCTTAGGGGCAAGAGATGGCTCAGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR-3UTR TCA 90 bp | TTTACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTACATAATTGCTTTCTCTaGGTCCACAGACTTAACGTA | + |
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Preference number: 2 (lower is better) Translates to: FTAHRGQKRVVDSLKLKLHNCFL*VHRLNV Trigger: TACGTTAAGTCTGTGGACTCAGAGAAAGCAATTATG...TAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTTTCGTCATGTGAGCTATCACCAATTTTTGTGCAACTTTAGCAAAGACACAATAATTAATCCTATGTaGAGTCCAGGTGACAAGACA | + |
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Preference number: 2 (lower is better) Translates to: TFRHVSYHQFLCNFSKDTIINPM*SPGDKT Trigger: TGTCTTGTCACCTGGACTCCACATAGGATTAATTAT...TGTGTCTTTGCTAAAGTTGCACAAAAATTGGTGATAGCTCACATGACGAAAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
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| 3UTR GCA 72 bp | CTGGCTGTTCTACCACCAGCCAGTGGGAACCCAAACTaGACCAAGTCTCAGTGCACACATGGAGTGGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: LAVLPPASGNPN*TKSQCTHGVVF Trigger: GAAGACCACTCCATGTGTGCACTGAGACTTGGTGCAGTTTGGGTTCCCACTGGCTGGTGGTAGAACAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| 3UTR GCA 72 bp | CCAGCCAGTGGGAACCCAAACTGCACCAAGTCTCAGTaGACACATGGAGTGGTCTTCAAGATGCTCACATCC | + |
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Preference number: 3 (lower is better) Translates to: PASGNPNCTKSQ*THGVVFKMLTS Trigger: GGATGTGAGCATCTTGAAGACCACTCCATGTGTGCACTGAGACTTGGTGCAGTTTGGGTTCCCACTGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTaGACTCAGGACCTATGGAAGAGAAGTCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGN*TQDLWKRSQCS Trigger: AGAGCACTGACTTCTCTTCCATAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR GCA 72 bp | TTTACCTCAGCCTCCCAAGTAGCAGGAACAAAGGCATaGCATCACGCGTGGCTTATACTGTACTCCTTTAAG | + |
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Preference number: 3 (lower is better) Translates to: FTSASQVAGTKA*HHAWLILYSFK Trigger: CTTAAAGGAGTACAGTATAAGCCACGCGTGATGGCATGCCTTTGTTCCTGCTACTTGGGAGGCTGAGGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020253.15 ENSMUST00000143108.8 |
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| 3UTR GCA 72 bp | ACGTTGGCAACAATGAATGGGAGGGCTCCAGATGTTTaGTTTTACATGATGTTCAGCAGAGCTGTTCGGTCC | + |
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Preference number: 3 (lower is better) Translates to: TLATMNGRAPDV*FYMMFSRAVRS Trigger: GGACCGAACAGCTCTGCTGAACATCATGTAAAAGCAAACATCTGGAGCCCTCCCATTCATTGTTGCCAACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| 3UTR CCA 72 bp | CCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTATGGAAGAGAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: PITDGCEPPCGC*ELNSGPMEEKS Trigger: TGACTTCTCTTCCATAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR CCA 72 bp | TCCCAAGTAGCAGGAACAAAGGCATGCCATCACGCGTaGCTTATACTGTACTCCTTTAAGGAAAGAACCTTA | + |
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Preference number: 3 (lower is better) Translates to: SQVAGTKACHHA*LILYSFKERTL Trigger: TAAGGTTCTTTCCTTAAAGGAGTACAGTATAAGCCACGCGTGATGGCATGCCTTTGTTCCTGCTACTTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020253.15 ENSMUST00000143108.8 |
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| 3UTR-3UTR CAA 90 bp | GAGTTCTACGTGGTAGCAGGCTATAAAAGCAGCATGAAAAAGAGAACTCCCGAAGAGGGCTCCAGATGTTaGCTTTTACATGATGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: EFYVVAGYKSSMKKRTPEEGSRC*LLHDVQ Trigger: CTGAACATCATGTAAAAGCAAACATCTGGAGCCCTC...TTCGGGAGTTCTCTTTTTCATGCTGCTTTTATAGCCTGCTACCACGTAGAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| 3UTR TCA 72 bp | GTTCAGCAGAGCTGTTCGGTCCAAGAACACAGAGGATaGAGTTTGACTTCACAGACCTTCATAGACTTTGAT | + |
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Preference number: 3 (lower is better) Translates to: VQQSCSVQEHRG*SLTSQTFIDFD Trigger: ATCAAAGTCTATGAAGGTCTGTGAAGTCAAACTTCATCCTCTGTGTTCTTGGACCGAACAGCTCTGCTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| 3UTR GCA 72 bp | TGCCTTTTCTTCCCAAGTGATGGTGTCAAATGTGTGTaGCACCACACCCAGCTAACTTACGTTCTTTTTGAA | + |
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Preference number: 3 (lower is better) Translates to: CLFFPSDGVKCV*HHTQLTYVLFE Trigger: TTCAAAAAGAACGTAAGTTAGCTGGGTGTGGTGGCACACACATTTGACACCATCACTTGGGAAGAAAAGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR-3UTR CAA 90 bp | TACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTACACCACTGAGCCATCTCTaGCCCCTAAGATATGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: YCPQRSEKGSRFFKTKVTPLSHL*PLRYVL Trigger: AAGAACATATCTTAGGGGCAAGAGATGGCTCAGTGG...TGTAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR TCA 72 bp | CTTGAACCTGTTCCGGTGCTTGTTGACATGAAGTCTTaGAGATGTTTAGATGAAGGTGTCTTGAAATTTGCA | + |
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Preference number: 3 (lower is better) Translates to: LEPVPVLVDMKS*RCLDEGVLKFA Trigger: TGCAAATTTCAAGACACCTTCATCTAAACATCTTCAAGACTTCATGTCAACAAGCACCGGAACAGGTTCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126074.8 |
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| 3UTR-3UTR CAA 90 bp | TACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTACATGCAATTCTCCCATCTaGTTTAGCTACCTTTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: YCPQRSEKGSRFFKTKVTCNSPI*FSYLSH Trigger: ATGGGAAAGGTAGCTAAACAAGATGGGAGAATTGCA...TGTAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| 3UTR TCA 72 bp | TGTAAACCTGTTCCGGTGCTTGTTGACATGAAGTCTTaGAGATGTTTAGATGAAGGTGTCTTGAAATTTGCA | + |
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Preference number: 3 (lower is better) Translates to: CKPVPVLVDMKS*RCLDEGVLKFA Trigger: TGCAAATTTCAAGACACCTTCATCTAAACATCTTCAAGACTTCATGTCAACAAGCACCGGAACAGGTTTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143108.8 |
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| 3UTR TCA 72 bp | TACATTACTCTAAACTCTCTACATAATTGCTTTCTCTaGGTCCACAGACTTAACGTATTTCCATGCTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: YITLNSLHNCFL*VHRLNVFPCFG Trigger: ACCAAAGCATGGAAATACGTTAAGTCTGTGGACTCAGAGAAAGCAATTATGTAGAGAGTTTAGAGTAATGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| CDS-3UTR CCA 90 bp | ATGACCGCCTGGCTGTTCTACCACCAGCCAGTGGGAACCCAAACTGCACCAAGTCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCT | + |
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Preference number: 4 (lower is better) Translates to: MTAWLFYHQPVGTQTAPSPPCGC*ELNSGP Trigger: AGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGG...ACTTGGTGCAGTTTGGGTTCCCACTGGCTGGTGGTAGAACAGCCAGGCGGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| CDS-3UTR GCA 90 bp | TACCACCAGCCAGTGGGAACCCAAACTGCACCAAGTCTCAGTGCACACATGGAGGAGCCACCATGTGGTTaGTGGGAATTGAACTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: YHQPVGTQTAPSLSAHMEEPPCG*WELNSG Trigger: TCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTC...CTCCATGTGTGCACTGAGACTTGGTGCAGTTTGGGTTCCCACTGGCTGGTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTATGGAAGAGAAGTCAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWE*NSGPMEEKSVL Trigger: GAGCACTGACTTCTCTTCCATAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| CDS-3UTR TCA 90 bp | AATCCTATGTGGAGTCCAGGTGACAAGACACTGGTGCCTGCAATAGTAGACCCAATCAATGGCATCCAGTaGCTGGTAGATAAAGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: NPMWSPGDKTLVPAIVDPINGIQ*LVDKES Trigger: GGACTCTTTATCTACCAGTCACTGGATGCCATTGAT...TGGGTCTACTATTGCAGGCACCAGTGTCTTGTCACCTGGACTCCACATAGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
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| CDS-3UTR TCA 90 bp | AATCCTATGTGGAGTCCAGGTGACAAGACACTGGTGCCTGCAATAGTAGACCCAGAGCACAGTAAAACATaGACATCCCAACGAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: NPMWSPGDKTLVPAIVDPEHSKT*TSQRKS Trigger: GCTCTTTCGTTGGGATGTTCATGTTTTACTGTGCTC...TGGGTCTACTATTGCAGGCACCAGTGTCTTGTCACCTGGACTCCACATAGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
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| CDS-3UTR CCA 90 bp | AATCCTATGTGGAGTCCAGGTGACAAGACACTGGTGCCTGCAATAGTAGACCCAATCACTAAAGCTACCTaGATCTCAGTGACATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NPMWSPGDKTLVPAIVDPITKAT*ISVTST Trigger: GGTGGATGTCACTGAGATCCAGGTAGCTTTAGTGAT...TGGGTCTACTATTGCAGGCACCAGTGTCTTGTCACCTGGACTCCACATAGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
||
| CDS-3UTR TCA 90 bp | TTCTACCACCAGCCAGTGGGAACCCAAACTGCACCAAGTCTCAGTGCACACATGGTTGACATGAAGTCTTaGAGATGTTTAGATGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FYHQPVGTQTAPSLSAHMVDMKS*RCLDEG Trigger: ACCTTCATCTAAACATCTTCAAGACTTCATGTCAAC...CATGTGTGCACTGAGACTTGGTGCAGTTTGGGTTCCCACTGGCTGGTGGTAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTATATGTGGAGTCCAGGTaGCAAGACACTGGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTAHRGQKRVVDSLKLKLYVESR*QDTGAC Trigger: GCAGGCACCAGTGTCTTGTCACCTGGACTCCACATA...TAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR TCA 90 bp | TACTCTTTTGAGACAAGATTATACATTGCCCAGACTAGCCTCAAATTTGCAATTCTACCTGGATCTCAGTaGCATCCACCCTTCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: YSFETRLYIAQTSLKFAILPGSQ*HPPFQI Trigger: GATTTGGAAGGGTGGATGTCACTGAGATCCAGGTAG...AATTGCAAATTTGAGGCTAGTCTGGGCAATGTATAATCTTGTCTCAAAAGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAATATTAATCCACCTACAACTCCAAGAACCGGAACAATCTTCAGTTTTACTACCTGGATCTCAGTaGCATCCACCCTTCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: RKILIHLQLQEPEQSSVLLPGSQ*HPPFQI Trigger: GATTTGGAAGGGTGGATGTCACTGAGATCCAGGTAG...TAAAACTGAAGATTGTTCCGGTTCTTGGAGTTGTAGGTGGATTAATATTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
||
| CDS-3UTR CCA 90 bp | TTTACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTAAAGGTATGTCCAGTATaGTGCCTCCTCCGTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FTAHRGQKRVVDSLKLKLKVCPV*CLLRDC Trigger: ACAGTCACGGAGGAGGCACCATACTGGACATACCTT...TAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTTGAAGATATAGTTCACTTTTCGTCATGTGAGCTATCACCAATTTTTGTGAAGGTATGTCCAGTATaGTGCCTCCTCCGTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLEDIVHFSSCELSPIFVKVCPV*CLLRDC Trigger: ACAGTCACGGAGGAGGCACCATACTGGACATACCTT...CACAAAAATTGGTGATAGCTCACATGACGAAAAGTGAACTATATCTTCAAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
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| CDS-3UTR CCA 90 bp | AGGAAAATATTAATCCACCTACAACTCCAAGAACCGGAACAATCTTCAGTTTTAAAGGTATGTCCAGTATaGTGCCTCCTCCGTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKILIHLQLQEPEQSSVLKVCPV*CLLRDC Trigger: ACAGTCACGGAGGAGGCACCATACTGGACATACCTT...TAAAACTGAAGATTGTTCCGGTTCTTGGAGTTGTAGGTGGATTAATATTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
||
| CDS-3UTR TCA 90 bp | CCACTGAGCCATCTCTTGCCCCTAAGATATGTTCTTATAAACCATAATTTAAGTATCAATGGCATCCAGTaGCTGGTAGATAAAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLSHLLPLRYVLINHNLSINGIQ*LVDKES Trigger: GGACTCTTTATCTACCAGTCACTGGATGCCATTGAT...ACTTAAATTATGGTTTATAAGAACATATCTTAGGGGCAAGAGATGGCTCAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR CCA 90 bp | TACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTACAATCACTAAAGCTACCTaGATCTCAGTGACATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YCPQRSEKGSRFFKTKVTITKAT*ISVTST Trigger: GGTGGATGTCACTGAGATCCAGGTAGCTTTAGTGAT...TGTAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTTGAAGATATAGTTCACTTTTCGTCATGTGAGCTATCACCAATTTTTGTGATCAATGGCATCCAGTaGCTGGTAGATAAAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLEDIVHFSSCELSPIFVINGIQ*LVDKES Trigger: GGACTCTTTATCTACCAGTCACTGGATGCCATTGAT...CACAAAAATTGGTGATAGCTCACATGACGAAAAGTGAACTATATCTTCAAGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTAGAGCACAGTAAAACATaGACATCCCAACGAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTAHRGQKRVVDSLKLKLEHSKT*TSQRKS Trigger: GCTCTTTCGTTGGGATGTTCATGTTTTACTGTGCTC...TAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAATATTAATCCACCTACAACTCCAAGAACCGGAACAATCTTCAGTTTTAGAGCACAGTAAAACATaGACATCCCAACGAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKILIHLQLQEPEQSSVLEHSKT*TSQRKS Trigger: GCTCTTTCGTTGGGATGTTCATGTTTTACTGTGCTC...TAAAACTGAAGATTGTTCCGGTTCTTGGAGTTGTAGGTGGATTAATATTTTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
||
| CDS-3UTR TCA 90 bp | TACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTACATTTGAAGAAAGAACTTaGACCTGTTCCGGTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YCPQRSEKGSRFFKTKVTFEERT*TCSGAC Trigger: ACAAGCACCGGAACAGGTTCAAGTTCTTTCTTCAAA...TGTAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR TCA 90 bp | TACTCTTTTGAGACAAGATTATACATTGCCCAGACTAGCCTCAAATTTGCAATTAGAGAGTCACAACCATaGTCAAATAGTTCCCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSFETRLYIAQTSLKFAIRESQP*SNSSPK Trigger: CTTAGGGGAACTATTTGATCATGGTTGTGACTCTCT...AATTGCAAATTTGAGGCTAGTCTGGGCAATGTATAATCTTGTCTCAAAAGAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAATATTAATCCACCTACAACTCCAAGAACCGGAACAATCTTCAGTTTTAAGAGAGTCACAACCATaGTCAAATAGTTCCCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKILIHLQLQEPEQSSVLRESQP*SNSSPK Trigger: CTTAGGGGAACTATTTGATCATGGTTGTGACTCTCT...TAAAACTGAAGATTGTTCCGGTTCTTGGAGTTGTAGGTGGATTAATATTTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
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| CDS-3UTR TCA 90 bp | TACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTACACAAATGTTGACAACATaGAGACGATCACTAAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: YCPQRSEKGSRFFKTKVTQMLTT*RRSLKL Trigger: TAGCTTTAGTGATCGTCTTCATGTTGTCAACATTTG...TGTAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTTCGTCATGTGAGCTATCACCAATTTTTGTGCAACTTTAGCAAAGACACACAAATGTTGACAACATaGAGACGATCACTAAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TFRHVSYHQFLCNFSKDTQMLTT*RRSLKL Trigger: TAGCTTTAGTGATCGTCTTCATGTTGTCAACATTTG...TGTGTCTTTGCTAAAGTTGCACAAAAATTGGTGATAGCTCACATGACGAAAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
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| CDS-3UTR TCA 90 bp | CCACTGAGCCATCTCTTGCCCCTAAGATATGTTCTTATAAACCATAATTTAAGTATTCTGATGAGTCTTTaGAGAAAGAACTTGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSHLLPLRYVLINHNLSILMSL*RKNLNL Trigger: CAGGTTCAAGTTCTTTCTTCAAAGACTCATCAGAAT...ACTTAAATTATGGTTTATAAGAACATATCTTAGGGGCAAGAGATGGCTCAGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR TCA 90 bp | TACTCTTTTGAGACAAGATTATACATTGCCCAGACTAGCCTCAAATTTGCAATTGTTGACATGAAGTCTTaGAGATGTTTAGATGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YSFETRLYIAQTSLKFAIVDMKS*RCLDEG Trigger: ACCTTCATCTAAACATCTTCAAGACTTCATGTCAAC...AATTGCAAATTTGAGGCTAGTCTGGGCAATGTATAATCTTGTCTCAAAAGAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR CCA 90 bp | TACTCTTTTGAGACAAGATTATACATTGCCCAGACTAGCCTCAAATTTGCAATTATAATTAATCCTATGTaGAGTCCAGGTGACAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: YSFETRLYIAQTSLKFAIIINPM*SPGDKT Trigger: TGTCTTGTCACCTGGACTCCACATAGGATTAATTAT...AATTGCAAATTTGAGGCTAGTCTGGGCAATGTATAATCTTGTCTCAAAAGAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS TCA 90 bp | CCGCGGTGTAGCGGTGCTCCTCCAGCCGCCGCAGCTGCGCGGCACTaGGCGGCTCACCTAGCGCCTTTACCCAGCGCGGCGCCGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRCSGAPPAAAAARH*AAHLAPLPSAAPAW Trigger: CCAGGCCGGCGCCGCGCTGGGTAAAGGCGCTAGGTGAGCCGCTCAGTGCCGCGCAGCTGCGGCGGCTGGAGGAGCACCGCTACACCGCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020253.15 ENSMUST00000073783.6 ENSMUST00000117440.8 ENSMUST00000117579.8 ENSMUST00000126074.8 ENSMUST00000139109.8 |
||
| CDS-3UTR CAA 90 bp | AATCCTATGTGGAGTCCAGGTGACAAGACACTGGTGCCTGCAATAGTAGACCCACCAGAGCGGGATCCATaGGAGCAGCCAGGTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: NPMWSPGDKTLVPAIVDPPERDP*EQPGPV Trigger: TACTGGACCTGGCTGCTCCAATGGATCCCGCTCTGG...TGGGTCTACTATTGCAGGCACCAGTGTCTTGTCACCTGGACTCCACATAGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
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| CDS-3UTR CAA 90 bp | CCGCCTGGCTGTTCTACCACCAGCCAGTGGGAACCCAAACTGCACCAAGTCTCATTAGATGAAGGTGTCTaGAAATTTGCAGGCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PPGCSTTSQWEPKLHQVSLDEGV*KFAGTK Trigger: CTTTGTGCCTGCAAATTTCAAGACACCTTCATCTAA...TGAGACTTGGTGCAGTTTGGGTTCCCACTGGCTGGTGGTAGAACAGCCAGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| CDS CCA 90 bp | GCGTCAGATCTTGTTACAGATGGTTGTGATCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASDLVTDGCDPPCGC*DLNSGPSEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGATCACAACCATCTGTAACAAGATCTGACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073783.6 |
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| CDS TCA 90 bp | ATCTTGTTACAGATGGTTGTGATCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
|
Preference number: 5 (lower is better) Translates to: ILLQMVVIHHVVAGI*TLDLQKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGATCACAACCATCTGTAACAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073783.6 |
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| CDS-3UTR CAA 90 bp | CCACTGAGCCATCTCTTGCCCCTAAGATATGTTCTTATAAACCATAATTTAAGTCCAGAGCGGGATCCATaGGAGCAGCCAGGTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLSHLLPLRYVLINHNLSPERDP*EQPGPV Trigger: TACTGGACCTGGCTGCTCCAATGGATCCCGCTCTGG...ACTTAAATTATGGTTTATAAGAACATATCTTAGGGGCAAGAGATGGCTCAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| CDS-3UTR CAA 90 bp | AATCCTATGTGGAGTCCAGGTGACAAGACACTGGTGCCTGCAATAGTAGACCCATATAGTCCCACATTGTaGCTCCTCCAAATGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: NPMWSPGDKTLVPAIVDPYSPTL*LLQMLT Trigger: TGTCAACATTTGGAGGAGCAACAATGTGGGACTATA...TGGGTCTACTATTGCAGGCACCAGTGTCTTGTCACCTGGACTCCACATAGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
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| CDS CCA 90 bp | GCTCCTCCAAATGTTGACAACATGAAGACGATCACTAAAGCTACCTaGATCTCAGTGACATCCACCCTTCCAAATCTTAACACTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: APPNVDNMKTITKAT*ISVTSTLPNLNTPE Trigger: CTCAGGAGTGTTAAGATTTGGAAGGGTGGATGTCACTGAGATCCAGGTAGCTTTAGTGATCGTCTTCATGTTGTCAACATTTGGAGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020253.15 ENSMUST00000117440.8 ENSMUST00000126074.8 ENSMUST00000139109.8 ENSMUST00000143108.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTTGAAGATATAGTTCACTTTTCGTCATGTGAGCTATCACCAATTTTTGTGCCAGAGCGGGATCCATaGGAGCAGCCAGGTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CLEDIVHFSSCELSPIFVPERDP*EQPGPV Trigger: TACTGGACCTGGCTGCTCCAATGGATCCCGCTCTGG...CACAAAAATTGGTGATAGCTCACATGACGAAAAGTGAACTATATCTTCAAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
||
| CDS-3UTR CAA 90 bp | TTTACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTAAGTGTGGTGACCAGGTaGATGGCGAGGCCGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FTAHRGQKRVVDSLKLKLSVVTR*MARPMR Trigger: CCTCATCGGCCTCGCCATCAACCTGGTCACCACACT...TAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAAATATTAATCCACCTACAACTCCAAGAACCGGAACAATCTTCAGTTTTAAGTGTGGTGACCAGGTaGATGGCGAGGCCGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKILIHLQLQEPEQSSVLSVVTR*MARPMR Trigger: CCTCATCGGCCTCGCCATCAACCTGGTCACCACACT...TAAAACTGAAGATTGTTCCGGTTCTTGGAGTTGTAGGTGGATTAATATTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
||
| CDS TCA 90 bp | GAATTGAACTCAGGACCTGTTCCGGTGCTTGTTGACATGAAGTCTTaGAGATGTTTAGATGAAGGTGTCTTGAAATTTGCAGGCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ELNSGPVPVLVDMKS*RCLDEGVLKFAGTK Trigger: CTTTGTGCCTGCAAATTTCAAGACACCTTCATCTAAACATCTTCAAGACTTCATGTCAACAAGCACCGGAACAGGTCCTGAGTTCAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGTAGTCTTTTCTACATGTATTCCCAGTGTGTTTTCAATAGGAAGCAACCAATAGTAGACCCATTCTaGCCAACACCACCATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FCSLFYMYSQCVFNRKQPIVDPF*PTPPWR Trigger: CCTCCATGGTGGTGTTGGCAAGAATGGGTCTACTAT...TGGTTGCTTCCTATTGAAAACACACTGGGAATACATGTAGAAAAGACTACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
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| CDS-3UTR CAA 90 bp | CCACCTACAACTCCAAGAACCGGAACAATCTTCAGTTTTATTTCTAGAATAGGTACGTATAGTCCCACATaGTTGCTCCTCCAAATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPTTPRTGTIFSFISRIGTYSPT*LLLQML Trigger: CAACATTTGGAGGAGCAACAATGTGGGACTATACGT...ACCTATTCTAGAAATAAAACTGAAGATTGTTCCGGTTCTTGGAGTTGTAGGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
||
| CDS-3UTR CAA 90 bp | CCACTGAGCCATCTCTTGCCCCTAAGATATGTTCTTATAAACCATAATTTAAGTTCGTATAGTCCCACATaGTTGCTCCTCCAAATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLSHLLPLRYVLINHNLSSYSPT*LLLQML Trigger: CAACATTTGGAGGAGCAACAATGTGGGACTATACGA...ACTTAAATTATGGTTTATAAGAACATATCTTAGGGGCAAGAGATGGCTCAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTTGAAGATATAGTTCACTTTTCGTCATGTGAGCTATCACCAATTTTTGTGACGTATAGTCCCACATaGTTGCTCCTCCAAATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLEDIVHFSSCELSPIFVTYSPT*LLLQML Trigger: CAACATTTGGAGGAGCAACAATGTGGGACTATACGT...CACAAAAATTGGTGATAGCTCACATGACGAAAAGTGAACTATATCTTCAAGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
||
| CDS-3UTR CAA 90 bp | TTTACTGCCCACAGAGGTCAGAAAAGGGTAGTAGATTCTTTAAAACTAAAGTTATATAGTCCCACATTGTaGCTCCTCCAAATGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FTAHRGQKRVVDSLKLKLYSPTL*LLQMLT Trigger: TGTCAACATTTGGAGGAGCAACAATGTGGGACTATA...TAACTTTAGTTTTAAAGAATCTACTACCCTTTTCTGACCTCTGTGGGCAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAAATATTAATCCACCTACAACTCCAAGAACCGGAACAATCTTCAGTTTTATATAGTCCCACATTGTaGCTCCTCCAAATGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: RKILIHLQLQEPEQSSVLYSPTL*LLQMLT Trigger: TGTCAACATTTGGAGGAGCAACAATGTGGGACTATA...TAAAACTGAAGATTGTTCCGGTTCTTGGAGTTGTAGGTGGATTAATATTTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126074.8 ENSMUST00000143108.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGTAGTCTTTTCTACATGTATTCCCAGTGTGTTTTCAATAGGAAGCAACCAAGCTATCACCAATTTTaGTGCAACTTTAGCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FCSLFYMYSQCVFNRKQPSYHQF*CNFSKD Trigger: GTCTTTGCTAAAGTTGCACAAAAATTGGTGATAGCT...TGGTTGCTTCCTATTGAAAACACACTGGGAATACATGTAGAAAAGACTACAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS-3UTR CAA 90 bp | TACTCTTTTGAGACAAGATTATACATTGCCCAGACTAGCCTCAAATTTGCAATTTTAGATGAAGGTGTCTaGAAATTTGCAGGCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: YSFETRLYIAQTSLKFAILDEGV*KFAGTK Trigger: CTTTGTGCCTGCAAATTTCAAGACACCTTCATCTAA...AATTGCAAATTTGAGGCTAGTCTGGGCAATGTATAATCTTGTCTCAAAAGAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117440.8 |
||
| CDS TCA 72 bp | AGCGGTGCTCCTCCAGCCGCCGCAGCTGCGCGGCACTaGGCGGCTCACCTAGCGCCTTTACCCAGCGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SGAPPAAAAARH*AAHLAPLPSAA Trigger: CGCCGCGCTGGGTAAAGGCGCTAGGTGAGCCGCTCAGTGCCGCGCAGCTGCGGCGGCTGGAGGAGCACCGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020253.15 ENSMUST00000073783.6 ENSMUST00000117440.8 ENSMUST00000117579.8 ENSMUST00000126074.8 ENSMUST00000139109.8 |
||
| CDS CAA 72 bp | GGTGATGGTGTTGGGGGCCATCCAGAGCGGGATCCATaGGAGCAGCCAGGTCCAGTAAAGCTGCAGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GDGVGGHPERDP*EQPGPVKLQRR Trigger: CCGCCGCTGCAGCTTTACTGGACCTGGCTGCTCCAATGGATCCCGCTCTGGATGGCCCCCAACACCATCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000020253.15 ENSMUST00000073783.6 ENSMUST00000117440.8 ENSMUST00000117579.8 ENSMUST00000126074.8 ENSMUST00000139109.8 ENSMUST00000143108.8 |
||
| CDS CAA 90 bp | GCCGATGAGGGTGATGGTGTTGGGGGCCATCCAGAGCGGGATCCATaGGAGCAGCCAGGTCCAGTAAAGCTGCAGCGGCGGCTCGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: ADEGDGVGGHPERDP*EQPGPVKLQRRLEQ Trigger: CTGTTCGAGCCGCCGCTGCAGCTTTACTGGACCTGGCTGCTCCAATGGATCCCGCTCTGGATGGCCCCCAACACCATCACCCTCATCGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000020253.15 ENSMUST00000073783.6 ENSMUST00000117440.8 ENSMUST00000117579.8 ENSMUST00000126074.8 ENSMUST00000139109.8 ENSMUST00000143108.8 |
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| CDS CAA 90 bp | AGTGTGGTGACCAGGTTGATGGCGAGGCCGATGAGGGTGATGGTGTaGGGGGCCATCCAGAGCGGGATCCATTGGAGCAGCCAGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SVVTRLMARPMRVMV*GAIQSGIHWSSQVQ Trigger: CTGGACCTGGCTGCTCCAATGGATCCCGCTCTGGATGGCCCCCAACACCATCACCCTCATCGGCCTCGCCATCAACCTGGTCACCACACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000020253.15 ENSMUST00000073783.6 ENSMUST00000117440.8 ENSMUST00000117579.8 ENSMUST00000126074.8 ENSMUST00000139109.8 ENSMUST00000143108.8 |
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| CDS CAA 72 bp | ACCAGGTTGATGGCGAGGCCGATGAGGGTGATGGTGTaGGGGGCCATCCAGAGCGGGATCCATTGGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TRLMARPMRVMV*GAIQSGIHWSS Trigger: GCTGCTCCAATGGATCCCGCTCTGGATGGCCCCCAACACCATCACCCTCATCGGCCTCGCCATCAACCTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000020253.15 ENSMUST00000073783.6 ENSMUST00000117440.8 ENSMUST00000117579.8 ENSMUST00000126074.8 ENSMUST00000139109.8 ENSMUST00000143108.8 |
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| CDS GCA 72 bp | GGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCGGAA | + |
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Preference number: 6 (lower is better) Translates to: GFELWTFRRAVG*SYPLSHLTSPE Trigger: TTCCGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073783.6 |
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| CDS CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTGTTCCGGTGCTTGTTGACATG | + |
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Preference number: 6 (lower is better) Translates to: TDGCEPPCGCWE*NSGPVPVLVDM Trigger: CATGTCAACAAGCACCGGAACAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| CDS CAA 90 bp | GATCTTGTTACAGATGGTTGTGATCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
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Preference number: 6 (lower is better) Translates to: DLVTDGCDPPCGCWD*NSGPSEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGATCACAACCATCTGTAACAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073783.6 |
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| CDS GCA 72 bp | GATCTTGTTACAGATGGTTGTGATCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCAGAAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: DLVTDGCDPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGATCACAACCATCTGTAACAAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073783.6 |
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| CDS TCA 72 bp | TCAGGACCTGTTCCGGTGCTTGTTGACATGAAGTCTTaGAGATGTTTAGATGAAGGTGTCTTGAAATTTGCA | + |
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Preference number: 6 (lower is better) Translates to: SGPVPVLVDMKS*RCLDEGVLKFA Trigger: TGCAAATTTCAAGACACCTTCATCTAAACATCTTCAAGACTTCATGTCAACAAGCACCGGAACAGGTCCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148899.8 |
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| CDS CCA 72 bp | AATGTTGACAACATGAAGACGATCACTAAAGCTACCTaGATCTCAGTGACATCCACCCTTCCAAATCTTAAC | + |
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Preference number: 6 (lower is better) Translates to: NVDNMKTITKAT*ISVTSTLPNLN Trigger: GTTAAGATTTGGAAGGGTGGATGTCACTGAGATCCAGGTAGCTTTAGTGATCGTCTTCATGTTGTCAACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020253.15 ENSMUST00000117440.8 ENSMUST00000126074.8 ENSMUST00000139109.8 ENSMUST00000143108.8 |
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