Pregenerated sensors for CHPF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038181Ensembl transcript IDs: ENSMUST00000088295.9, ENSMUST00000121863.5, ENSMUST00000197318.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGGTCGTGCGCAACACCTAGGAGCCCGTGAACAAGCGTCAGGGTaGACCAGCCACTCCGCCCAGCACAGGCCCTGGGCTCTGGACTCC | + |
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Preference number: 1 (lower is better) Translates to: AGRAQHLGAREQASG*TSHSAQHRPWALDS Trigger: GGAGTCCAGAGCCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGCTCCTAGGTGTTGCGCACGACCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR TCA 90 bp | AGGAGCTGGAGCAGTCGCTGGTCGTGCGCAACACCTAGGAGCCCGTaGACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCC | + |
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Preference number: 1 (lower is better) Translates to: RSWSSRWSCATPRSP*TSVRVDQPLRPAQA Trigger: GGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGCTCCTAGGTGTTGCGCACGACCAGCGACTGCTCCAGCTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR GCA 90 bp | AGGCCCAGGAACCCGAGGCTCCCTCTCCTTCAGTCCTGGCAGCCTTaGCTCTCACCTGGCCACAGTTACCTGTCCACCACCCTACACCCC | + |
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Preference number: 1 (lower is better) Translates to: RPRNPRLPLLQSWQP*LSPGHSYLSTTLHP Trigger: GGGGTGTAGGGTGGTGGACAGGTAACTGTGGCCAGGTGAGAGGCAAGGCTGCCAGGACTGAAGGAGAGGGAGCCTCGGGTTCCTGGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR CCA 90 bp | GTCCAAGACCTGCTCCGCTCCCAGAGCCGTGATCTCAAGGTGAAGTaGGGCTCCGGGAGCACTGATGCGAAGACAAGCACACGGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: VQDLLRSQSRDLKVK*GSGSTDAKTSTRAG Trigger: CCCAGCCCGTGTGCTTGTCTTCGCATCAGTGCTCCCGGAGCCCCACTTCACCTTGAGATCACGGCTCTGGGAGCGGAGCAGGTCTTGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR TCA 90 bp | GCTACGTCCAAGACCTGCTCCGCTCCCAGAGCCGTGATCTCAAGGTaGAGTGGGGCTCCGGGAGCACTGATGCGAAGACAAGCACACGGG | + |
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Preference number: 1 (lower is better) Translates to: ATSKTCSAPRAVISR*SGAPGALMRRQAHG Trigger: CCCGTGTGCTTGTCTTCGCATCAGTGCTCCCGGAGCCCCACTTCACCTTGAGATCACGGCTCTGGGAGCGGAGCAGGTCTTGGACGTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR CCA 90 bp | CCCGAGGCTCCCTCTCCTTCAGTCCTGGCAGCCTTGCCTCTCACCTaGCCACAGTTACCTGTCCACCACCCTACACCCCCATGCAGTAGT | + |
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Preference number: 1 (lower is better) Translates to: PEAPSPSVLAALPLT*PQLPVHHPTPPCSS Trigger: ACTACTGCATGGGGGTGTAGGGTGGTGGACAGGTAACTGTGGCCAGGTGAGAGGCAAGGCTGCCAGGACTGAAGGAGAGGGAGCCTCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR CCA 90 bp | CTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATaGATTAAAGGTCACGTAACAGACAGCAGCCTTGTGGTCATTGTG | + |
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Preference number: 1 (lower is better) Translates to: LDSPSRAVRKVGRAG*IKGHVTDSSLVVIV Trigger: CACAATGACCACAAGGCTGCTGTCTGTTACGTGACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCCCTAGCCCTGGGCTTCCGTGGTGTACCATGGACATCAGAGGCTGGACTGCCCAGCACAGGCCCTaGGCTCTGGACTCCCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PSPSPGLPWCTMDIRGWTAQHRP*ALDSPS Trigger: AGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGGC...AGTCCAGCCTCTGATGTCCATGGTACACCACGGAAGCCCAGGGCTAGGGCTGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR GCA 90 bp | AGACAAGCACACGGGCTGGGGCAGGTGGGCATGCACCTCAGGGGAACTCACCACAGCAGTCGCTGGTCGTaGGCAACACCTAGGAGCCCG | + |
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Preference number: 2 (lower is better) Translates to: RQAHGLGQVGMHLRGTHHSSRWS*ATPRSP Trigger: CGGGCTCCTAGGTGTTGCGCACGACCAGCGACTGCT...GTGGTGAGTTCCCCTGAGGTGCATGCCCACCTGCCCCAGCCCGTGTGCTTGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCTGGCTCGCTGCCATCAGCACCCAGGATTCTGACTTGCCCTCAGCTTCTGACAAGCACACGGGCTaGGGCAGGTGGGCATGCACC | + |
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Preference number: 2 (lower is better) Translates to: PAWLAAISTQDSDLPSASDKHTG*GRWACT Trigger: GGTGCATGCCCACCTGCCCCAGCCCGTGTGCTTGTC...AGAAGCTGAGGGCAAGTCAGAATCCTGGGTGCTGATGGCAGCGAGCCAGGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR GCA 90 bp | CCATGGACATCAGAGGCTGGACTTCTCTGGCAGCGTGGACCCATCAGACCAGAATCCGTCACCTTGCCTTaGCCTTCCCGGGGCTATGGC | + |
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Preference number: 2 (lower is better) Translates to: PWTSEAGLLWQRGPIRPESVTLP*PSRGYG Trigger: GCCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGA...TTCTGGTCTGATGGGTCCACGCTGCCAGAGAAGTCCAGCCTCTGATGTCCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCTGGCTCGCTGCCATCAGCACCCAGGATTCTGACTTGCCCTCAGCTTCTCCTCTCCTTCAGTCCTaGCAGCCTTGCCTCTCACCT | + |
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Preference number: 2 (lower is better) Translates to: PAWLAAISTQDSDLPSASPLLQS*QPCLSP Trigger: AGGTGAGAGGCAAGGCTGCCAGGACTGAAGGAGAGG...AGAAGCTGAGGGCAAGTCAGAATCCTGGGTGCTGATGGCAGCGAGCCAGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR GCA 90 bp | GTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGTCACGTAACAGACAGCAGCATCTGTCCGTCACCTTaGCTTGCCCTTCCCGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: VRKVGRAGWIKGHVTDSSICPSP*LALPGA Trigger: AGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGAT...GCTGCTGTCTGTTACGTGACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR CCA 90 bp | GTACCATGGACATCAGAGGCTGGACTTCTCTGGCAGCGTGGACCCATCAGACCAAGCTGGAGCAGTCGCTaGTCGTGCGCAACACCTAGG | + |
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Preference number: 2 (lower is better) Translates to: VPWTSEAGLLWQRGPIRPSWSSR*SCATPR Trigger: CCTAGGTGTTGCGCACGACCAGCGACTGCTCCAGCT...TGGTCTGATGGGTCCACGCTGCCAGAGAAGTCCAGCCTCTGATGTCCATGGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCTGGCTCGCTGCCATCAGCACCCAGGATTCTGACTTGCCCTCAGCTTCTAGGAGATCAGTGCTCTaGACAGTAAGGTGCGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: PAWLAAISTQDSDLPSASRRSVL*TVRCGL Trigger: CAGGCCGCACCTTACTGTCCAGAGCACTGATCTCCT...AGAAGCTGAGGGCAAGTCAGAATCCTGGGTGCTGATGGCAGCGAGCCAGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR CCA 90 bp | ATGCCTGTTTCTCTACCTCCAGCCTGGCTCGCTGCCATCAGCACCCAGGATTCTGCCTTGCCTCTCACCTaGCCACAGTTACCTGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: MPVSLPPAWLAAISTQDSALPLT*PQLPVH Trigger: GTGGACAGGTAACTGTGGCCAGGTGAGAGGCAAGGC...AGAATCCTGGGTGCTGATGGCAGCGAGCCAGGCTGGAGGTAGAGAAACAGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR CCA 90 bp | CACCAGCCCTGGTCCCAGGAAGCCGTTAGCCGCTACTTCTACTGTAAGGTAATGGCCTTGTGGTCATTGTaGACGGGGATGGGAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: HQPWSQEAVSRYFYCKVMALWSL*TGMGRR Trigger: CCTCCTTCCCATCCCCGTCCACAATGACCACAAGGC...CATTACCTTACAGTAGAAGTAGCGGCTAACGGCTTCCTGGGACCAGGGCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTACCATGGACATCAGAGGCTGGACTTCTCTGGCAGCGTGGACCCATCAGGATCTCAAGGTGAAGTaGGGCTCCGGGAGCACTGAT | + |
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Preference number: 2 (lower is better) Translates to: WCTMDIRGWTSLAAWTHQDLKVK*GSGSTD Trigger: ATCAGTGCTCCCGGAGCCCCACTTCACCTTGAGATC...CTGATGGGTCCACGCTGCCAGAGAAGTCCAGCCTCTGATGTCCATGGTACACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGGACTAAGACCCAAGGTGCTAAGTAGCTTGCTCACAGAATGTGGCAGACGTCTCTGGACAGTAAGGTaGGGCCTGAGCCCAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KGLRPKVLSSLLTECGRRLWTVR*GLSPEL Trigger: CAGCTCTGGGCTCAGGCCGCACCTTACTGTCCAGAG...ACGTCTGCCACATTCTGTGAGCAAGCTACTTAGCACCTTGGGTCTTAGTCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTTCTTGTGGTCTTTCCAGAACGAAAGGATCGTTACTAGCTACTGTGTCTTTCCGTGGTGTACCATaGACATCAGAGGCTGGACTT | + |
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Preference number: 2 (lower is better) Translates to: SASCGLSRTKGSLLATVSFRGVP*TSEAGL Trigger: AAGTCCAGCCTCTGATGTCCATGGTACACCACGGAA...AGACACAGTAGCTAGTAACGATCCTTTCGTTCTGGAAAGACCACAAGAAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR CCA 72 bp | GGACCAGCCACTCCGCCCAGCACAGGCCCTGGGCTCTaGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: GPATPPSTGPGL*TPPLALCGRWG Trigger: TCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR CCA 72 bp | TCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTaGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SGWTSHSAQHRP*ALDSPSRAVRK Trigger: CTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR CCA 72 bp | GCGCAACACCTAGGAGCCCGTGAACAAGCGTCAGGGTaGACCAGCCACTCCGCCCAGCACAGGCCCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: AQHLGAREQASG*TSHSAQHRPWA Trigger: AGCCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGCTCCTAGGTGTTGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR-3UTR CAA 90 bp | AGACAAGCACACGGGCTGGGGCAGGTGGGCATGCACCTCAGGGGAACTCACCACCATCTGTCCGTCACCTaGCCTTGCCCTTCCCGGGGC | + |
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Preference number: 3 (lower is better) Translates to: RQAHGLGQVGMHLRGTHHHLSVT*PCPSRG Trigger: GCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATG...GTGGTGAGTTCCCCTGAGGTGCATGCCCACCTGCCCCAGCCCGTGTGCTTGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR TCA 72 bp | AGCAGTCGCTGGTCGTGCGCAACACCTAGGAGCCCGTaGACAAGCGTCAGGGTGGACCAGCCACTCCGCCCA | + |
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Preference number: 3 (lower is better) Translates to: SSRWSCATPRSP*TSVRVDQPLRP Trigger: TGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGCTCCTAGGTGTTGCGCACGACCAGCGACTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR GCA 72 bp | CCGCAGACAGGGAGTTTAGCTCCCTGGTCCCCTCCCTaGTTTCTCCACCCTCCTCATGTACCCTCCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: PQTGSLAPWSPP*FLHPPHVPSPA Trigger: GGCTGGGGAGGGTACATGAGGAGGGTGGAGAAAGCAGGGAGGGGACCAGGGAGCTAAACTCCCTGTCTGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR CCA 72 bp | AGGCCCAGGAACCCGAGGCTCCCTCTCCTTCAGTCCTaGCAGCCTTGCCTCTCACCTGGCCACAGTTACCTG | + |
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Preference number: 3 (lower is better) Translates to: RPRNPRLPLLQS*QPCLSPGHSYL Trigger: CAGGTAACTGTGGCCAGGTGAGAGGCAAGGCTGCCAGGACTGAAGGAGAGGGAGCCTCGGGTTCCTGGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR CCA 72 bp | TCCCCAGCCCTAGCCCTGGGCTTCCGTGGTGTACCATaGACATCAGAGGCTGGACTTCTCTGGCAGCGTGGA | + |
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Preference number: 3 (lower is better) Translates to: SPALALGFRGVP*TSEAGLLWQRG Trigger: TCCACGCTGCCAGAGAAGTCCAGCCTCTGATGTCCATGGTACACCACGGAAGCCCAGGGCTAGGGCTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR CCA 72 bp | CTGCTCCGCTCCCAGAGCCGTGATCTCAAGGTGAAGTaGGGCTCCGGGAGCACTGATGCGAAGACAAGCACA | + |
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Preference number: 3 (lower is better) Translates to: LLRSQSRDLKVK*GSGSTDAKTST Trigger: TGTGCTTGTCTTCGCATCAGTGCTCCCGGAGCCCCACTTCACCTTGAGATCACGGCTCTGGGAGCGGAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR TCA 72 bp | AAGACCTGCTCCGCTCCCAGAGCCGTGATCTCAAGGTaGAGTGGGGCTCCGGGAGCACTGATGCGAAGACAA | + |
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Preference number: 3 (lower is better) Translates to: KTCSAPRAVISR*SGAPGALMRRQ Trigger: TTGTCTTCGCATCAGTGCTCCCGGAGCCCCACTTCACCTTGAGATCACGGCTCTGGGAGCGGAGCAGGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| 3UTR GCA 72 bp | TGGCCACAGTTACCTGTCCACCACCCTACACCCCCATaGAGTAGTCTCCTGGTTCCCAGACTCTTCCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: WPQLPVHHPTPP*SSLLVPRLFQG Trigger: CCCCTGGAAGAGTCTGGGAACCAGGAGACTACTGCATGGGGGTGTAGGGTGGTGGACAGGTAACTGTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| CDS-3UTR TCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTACCCTCGGGGACCGGGTaGACGGCGAAGGCACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLPSGTG*TAKALR Trigger: CCTGAGTGCCTTCGCCGTTCACCCGGTCCCCGAGGG...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR TCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGTGTGGAGCCGGTACATaGGGGTGCCCTCGGGGACCG | + |
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Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWCGAGT*GCPRGP Trigger: CGGTCCCCGAGGGCACCCTCATGTACCGGCTCCACA...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR GCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGCACCACCTGCATCCCTaGAGGAGCCCGGGCCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMHHLHP*RSPGPS Trigger: CGAGGGGCCCGGGCTCCTGCAGGGATGCAGGTGGTG...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR GCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGCCCTGCTAGCCCCCTaGAGGGGACACTTGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMALLAP*RGHLGA Trigger: GGCTCCCAAGTGTCCCCTGCAGGGGGCTAGCAGGGC...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR GCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGCTGCGAAGGGGCCTCTaGTCGCACAGCGAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMLRRGL*SHSEPG Trigger: GCCTGGCTCGCTGTGCGAGCAGAGGCCCCTTCGCAG...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR CCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGGATGAGGGGGAGCACTaGCCGCAGCAGAGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWDEGEH*PQQSQQ Trigger: CTGCTGGCTCTGCTGCGGCCAGTGCTCCCCCTCATC...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR CCA 90 bp | GCACACGGGCTGGGGCAGGTGGGCATGCACCTCAGGGGAACTCACCACAGGCCCCCAGGGTGGACAGTGTaGCTCGAGAAGTCAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: AHGLGQVGMHLRGTHHRPPGWTV*LEKSGQ Trigger: CTGTCCTGACTTCTCGAGCCACACTGTCCACCCTGG...GGGCCTGTGGTGAGTTCCCCTGAGGTGCATGCCCACCTGCCCCAGCCCGTGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| CDS-3UTR TCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGGCAGGGTCTCTGACATaGGCCAGGCAGGCCGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWAGSLT*ARQAAH Trigger: ATGAGCGGCCTGCCTGGCTCATGTCAGAGACCCTGC...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR TCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGCATCAGGCCGGGCACTaGGAATGTCCCCTCGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMHQAGH*ECPLGS Trigger: GCTGCCGAGGGGACATTCTCAGTGCCCGGCCTGATG...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR TCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTACATCAGGCCGGGCACTaGGAATGTCCCCTCGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLHQAGH*ECPLGS Trigger: GCTGCCGAGGGGACATTCTCAGTGCCCGGCCTGATG...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR TCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGAGCGAGAGTGTGGAGTaGAAGGGGCCGGGAGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWSESVE*KGPGAQ Trigger: TTGGGCTCCCGGCCCCTTTCACTCCACACTCTCGCT...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR GCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGCCATTGAGAAGCCGCTaGTTCCGGAAGCGCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWPLRSR*FRKRRR Trigger: CCGCCTGCGCTTCCGGAAGCAGCGGCTTCTCAATGG...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR GCA 90 bp | AGACAAGCACACGGGCTGGGGCAGGTGGGCATGCACCTCAGGGGAACTCACCACAGTGGCAGCACCAGTTaGACCCGGGTAGCCTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: RQAHGLGQVGMHLRGTHHSGSTS*TRVASV Trigger: CACCGAGGCTACCCGGGTGCAACTGGTGCTGCCACT...GTGGTGAGTTCCCCTGAGGTGCATGCCCACCTGCCCCAGCCCGTGTGCTTGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| CDS-3UTR GCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGTCCATGAGTCGCACCTaGGAAGGGGCCTCTGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWSMSRT*EGASAR Trigger: GCGAGCAGAGGCCCCTTCGCAGGTGCGACTCATGGA...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR GCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGCCCTCTGCTGAAGCCTaGCGGTCAAATCTGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWPSAEA*RSNLPP Trigger: CGGGGGCAGATTTGACCGGCAGGCTTCAGCAGAGGG...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR GCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGCAGCCGGGCGCGGGCTaGCAGGTAGTCAGCATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWQPGAG*QVVSIV Trigger: TACAATGCTGACTACCTGGCAGCCCGCGCCCGGCTG...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGCTCCTCTTCCTGGCCTaGCAGTTCGCCAGCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMLLFLA*QFASQP Trigger: CGGCTGGCTGGCGAACTGGCAGGCCAGGAAGAGGAG...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGATGAGGGGGAGCACTaGCCGCAGCAGAGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMDEGEH*PQQSQQ Trigger: CTGCTGGCTCTGCTGCGGCCAGTGCTCCCCCTCATC...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATTGCCCCTGGTGCTGTaGGACACAGCCGATGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLLPLVL*DTADAQ Trigger: CTGGGCATCGGCTGTGTCTCACAGCACCAGGGGCAA...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | CCATGGACATCAGAGGCTGGACTTCTCTGGCAGCGTGGACCCATCAGACCAGAACACCACCTGCATCCCTaGAGGAGCCCGGGCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PWTSEAGLLWQRGPIRPEHHLHP*RSPGPS Trigger: CGAGGGGCCCGGGCTCCTGCAGGGATGCAGGTGGTG...TTCTGGTCTGATGGGTCCACGCTGCCAGAGAAGTCCAGCCTCTGATGTCCATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATCAGCAGGCTCACTCTaGGGGCCAGGGAGCGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLSAGSL*GPGSVC Trigger: ACAGACGCTCCCTGGCCCGCAGAGTGAGCCTGCTGA...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | CCACGGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTAAGGTGCGGCCTGAGCCAGCCGGGCGCGGGCTaGCAGGTAGTCAGCATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PRPTSRRSVLWTVRCGLSQPGAG*QVVSIV Trigger: TACAATGCTGACTACCTGGCAGCCCGCGCCCGGCTG...GCTCAGGCCGCACCTTACTGTCCAGAGCACTGATCTCCTGCTGGTTGGCCGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGTTCAGCCACCAGGAGTaGCAGCACCAGTTGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWFSHQE*QHQLHP Trigger: CGGGTGCAACTGGTGCTGCCACTCCTGGTGGCTGAA...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | CCACGGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTAAGGTGCGGCCTGAGCGCTTCCTCCTCTTCCTaGCCTGCCAGTTCGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRPTSRRSVLWTVRCGLSASSSS*PASSPA Trigger: GGCTGGCGAACTGGCAGGCCAGGAAGAGGAGGAAGC...GCTCAGGCCGCACCTTACTGTCCAGAGCACTGATCTCCTGCTGGTTGGCCGTGG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTAGCTTCCTCCTCTTCCTaGCCTGCCAGTTCGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLASSSS*PASSPA Trigger: GGCTGGCGAACTGGCAGGCCAGGAAGAGGAGGAAGC...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | AGACAAGCACACGGGCTGGGGCAGGTGGGCATGCACCTCAGGGGAACTCACCACACGGCTCGAAAGAGGTaGAGCCCTGAGAACCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQAHGLGQVGMHLRGTHHTARKR*SPENRR Trigger: CCTCCGGTTCTCAGGGCTCCACCTCTTTCGAGCCGT...GTGGTGAGTTCCCCTGAGGTGCATGCCCACCTGCCCCAGCCCGTGTGCTTGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGACGGCTCGAAAGAGGTaGAGCCCTGAGAACCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWTARKR*SPENRR Trigger: CCTCCGGTTCTCAGGGCTCCACCTCTTTCGAGCCGT...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTACCCCTCGCTGCCCTGTaGAGTAGAGTAACCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLPLAAL*SRVTEG Trigger: TCCCTCGGTTACTCTACTTCACAGGGCAGCGAGGGG...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | ATGCCTGTTTCTCTACCTCCAGCCTGGCTCGCTGCCATCAGCACCCAGGATTCTGTGGCGCAGGGTCTCTaGCATGAGCCAGGCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MPVSLPPAWLAAISTQDSVAQGL*HEPGRP Trigger: CGGCCTGCCTGGCTCATGTCAGAGACCCTGCGCCAC...AGAATCCTGGGTGCTGATGGCAGCGAGCCAGGCTGGAGGTAGAGAAACAGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR TCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGCCCCAAAGTGTGTGTaGAGGTGGCGCAGGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMAPKCV*RWRRVS Trigger: AGAGACCCTGCGCCACCTTCACACACACTTTGGGGC...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGCCAACTCCAGAGCACTaGAGCGTTTGTGGAGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWPTPEH*SVCGAG Trigger: ACCGGCTCCACAAACGCTTCAGTGCTCTGGAGTTGG...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGGCTGATAGCGCCGATTaGGCTGCTCCAGAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWADSAD*AAPELC Trigger: ACACAGCTCTGGAGCAGCTCAATCGGCGCTATCAGC...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTACTTGGGAGCCCCGTCTaGACAGGCGAAGGTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLLGSPV*TGEGVL Trigger: CAACACACCTTCGCCTGTGCAGACGGGGCTCCCAAG...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | GACCCCAAAGGCTACGTCCAAGACCTGCTCCGCTCCCAGAGCCGTGATCTCAAGAGCGTCCCCTACATCTaGCCTGCTAGCCCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DPKGYVQDLLRSQSRDLKSVPYI*PASPLQ Trigger: CTGCAGGGGGCTAGCAGGGCAGATGTAGGGGACGCT...CTTGAGATCACGGCTCTGGGAGCGGAGCAGGTCTTGGACGTAGCCTTTGGGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGTCTTCTCCCTCACCCTaGATCCAGGAAACCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWSSPSP*IQETRR Trigger: CCTGCGGGTTTCCTGGATCCAGGGTGAGGGAGAAGA...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | GCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTTTCCACTCTGCTCAGTaGCCTCAGCAGGCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALDSPSRAVRKVGRAGWIFHSAQ*PQQAHS Trigger: AGAGTGAGCCTGCTGAGGCCACTGAGCAGAGTGGAA...AATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCCTAGCCCTGGGCTTCCGTGGTGTACCATGGACATCAGAGGCTGGACTTTCAGCCACCAGGAGTaGCAGCACCAGTTGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: PSPSPGLPWCTMDIRGWTFSHQE*QHQLHP Trigger: CGGGTGCAACTGGTGCTGCCACTCCTGGTGGCTGAA...AGTCCAGCCTCTGATGTCCATGGTACACCACGGAAGCCCAGGGCTAGGGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| 3UTR CAA 72 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTaGCCCTTCCCGGGGCTATGGCAGATACAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLA*PFPGLWQIQGW Trigger: CCACCCCTGTATCTGCCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGTGGCGCAGGGTCTCTaGCATGAGCCAGGCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KNTVASPPSVRHLALPFPVAQGL*HEPGRP Trigger: CGGCCTGCCTGGCTCATGTCAGAGACCCTGCGCCAC...CGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGTATTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTAGCTGATAGCGCCGATTaGGCTGCTCCAGAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLADSAD*AAPELC Trigger: ACACAGCTCTGGAGCAGCTCAATCGGCGCTATCAGC...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGGGGAGATCTCTGTGGTaGCAGAGCAGGGTTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWGRSLW*QSRVEL Trigger: GAGTTCAACCCTGCTCTGTCACCACAGAGATCTCCC...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCCTAGCCCTGGGCTTCCGTGGTGTACCATGGACATCAGAGGCTGGACTGCCAATCTGGGGGCCTaGACATATGTGTCGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPSPGLPWCTMDIRGWTANLGA*TYVSSC Trigger: GCAGGACGACACATATGTGCAGGCCCCCAGATTGGC...AGTCCAGCCTCTGATGTCCATGGTACACCACGGAAGCCCAGGGCTAGGGCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGCCAATCTGGGGGCCTaGACATATGTGTCGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMANLGA*TYVSSC Trigger: GCAGGACGACACATATGTGCAGGCCCCCAGATTGGC...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGTACTGTTGCCCCTGGTaGTGTGAGACACAGCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWYCCPW*CETQPM Trigger: CATCGGCTGTGTCTCACAGCACCAGGGGCAACAGTA...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | TGCCTGTTTCTCTACCTCCAGCCTGGCTCGCTGCCATCAGCACCCAGGATTCTGCCATTGAGAAGCCGCTaGTTCCGGAAGCGCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CLFLYLQPGSLPSAPRILPLRSR*FRKRRR Trigger: CCGCCTGCGCTTCCGGAAGCAGCGGCTTCTCAATGG...CAGAATCCTGGGTGCTGATGGCAGCGAGCCAGGCTGGAGGTAGAGAAACAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGGTATTCCATGCCCCTTaGAGGGTCAAAGCGCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWVFHAP*RVKAPV Trigger: TACCGGCGCTTTGACCCTGCAAGGGGCATGGAATAC...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGCGAGGGTGTATTCCATaGCCCTTGCAGGGTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWRGCIP*PLQGQS Trigger: GCTTTGACCCTGCAAGGGGCATGGAATACACCCTCG...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTAGCAGGATTTCCACTCTaGTCAGTGGCCTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLAGFPL*SVASAG Trigger: GCCTGCTGAGGCCACTGAGCAGAGTGGAAATCCTGC...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTACGCAGAGAGAACTTCTaGACCAGCCCTGGCTCTACG | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLRRENF*TSPGST Trigger: CGTAGAGCCAGGGCTGGTGCAGAAGTTCTCTCTGCG...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTACCAGGGTGGACAGTGTaGCTCGAGAAGTCAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLPGWTV*LEKSGQ Trigger: CTGTCCTGACTTCTCGAGCCACACTGTCCACCCTGG...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGCGATACTGTTGCCCCTaGTGCTGTGAGACACAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMRYCCP*CCETQP Trigger: CGGCTGTGTCTCACAGCACCAGGGGCAACAGTATCG...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGGCACTGAAGCGTTTGTaGAGCCGGTACATGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWALKRL*SRYMRV Trigger: CACCCTCATGTACCGGCTCCACAAACGCTTCAGTGC...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | ACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGTCCTTCTGCACCAGCCCTaGCTCTACGGCTCGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPPLALCGRWGGLDGLKVLLHQP*LYGSKE Trigger: CTCTTTCGAGCCGTAGAGCCAGGGCTGGTGCAGAAG...GACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGCTTCTGCACCAGCCCTaGCTCTACGGCTCGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMLLHQP*LYGSKE Trigger: CTCTTTCGAGCCGTAGAGCCAGGGCTGGTGCAGAAG...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | CCACGGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTAAGGTGCGGCCTGAGCGTTCAAACAGAGCCATaGCTAGCTGGGTACGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRPTSRRSVLWTVRCGLSVQTEP*LAGYGP Trigger: GGGCCCGTACCCAGCTAGCCATGGCTCTGTTTGAAC...GCTCAGGCCGCACCTTACTGTCCAGAGCACTGATCTCCTGCTGGTTGGCCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGTTCAAACAGAGCCATaGCTAGCTGGGTACGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMVQTEP*LAGYGP Trigger: GGGCCCGTACCCAGCTAGCCATGGCTCTGTTTGAAC...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | GTACCATGGACATCAGAGGCTGGACTTCTCTGGCAGCGTGGACCCATCAGACCATTGCCCCTGGTGCTGTaGGACACAGCCGATGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPWTSEAGLLWQRGPIRPLPLVL*DTADAQ Trigger: CTGGGCATCGGCTGTGTCTCACAGCACCAGGGGCAA...TGGTCTGATGGGTCCACGCTGCCAGAGAAGTCCAGCCTCTGATGTCCATGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR TCA 90 bp | GAGGTGAAGGGACTAAGACCCAAGGTGCTAAGTAGCTTGCTCACAGAATGTGGCCCCTCGGGGACCGGGTaGACGGCGAAGGCACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVKGLRPKVLSSLLTECGPSGTG*TAKALR Trigger: CCTGAGTGCCTTCGCCGTTCACCCGGTCCCCGAGGG...GCCACATTCTGTGAGCAAGCTACTTAGCACCTTGGGTCTTAGTCCCTTCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | ATGCCTGTTTCTCTACCTCCAGCCTGGCTCGCTGCCATCAGCACCCAGGATTCTTCAGCAGGCTCACTCTaGGGGCCAGGGAGCGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MPVSLPPAWLAAISTQDSSAGSL*GPGSVC Trigger: ACAGACGCTCCCTGGCCCGCAGAGTGAGCCTGCTGA...AGAATCCTGGGTGCTGATGGCAGCGAGCCAGGCTGGAGGTAGAGAAACAGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | GACCCCAAAGGCTACGTCCAAGACCTGCTCCGCTCCCAGAGCCGTGATCTCAAGGCAGGATTTCCACTCTaGTCAGTGGCCTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DPKGYVQDLLRSQSRDLKAGFPL*SVASAG Trigger: GCCTGCTGAGGCCACTGAGCAGAGTGGAAATCCTGC...CTTGAGATCACGGCTCTGGGAGCGGAGCAGGTCTTGGACGTAGCCTTTGGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTACTGCCAGCCCGAGATTaGATTCATACGGCAGCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLLPARD*IHTAAV Trigger: AACCGCTGCCGTATGAATGCAATCTCGGGCTGGCAG...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGCAAGAGCTGCCAATCTaGGGGCCTGCACATATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWQELPI*GPAHMC Trigger: ACACATATGTGCAGGCCCCCAGATTGGCAGCTCTTG...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGCAGGGTCCCTATTCTTaGCCAGTTCGAAGGAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: VASPPSVRHLALPFPGLWQGPYS*PVRRSD Trigger: ATCGCTCCTTCGAACTGGCCAAGAATAGGGACCCTG...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATTCCACTCTGCTCAGTaGCCTCAGCAGGCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLFHSAQ*PQQAHS Trigger: AGAGTGAGCCTGCTGAGGCCACTGAGCAGAGTGGAA...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | AGACAAGCACACGGGCTGGGGCAGGTGGGCATGCACCTCAGGGGAACTCACCACTGGTTGATGCTAAGGTaGCCAGCAAGAGCTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RQAHGLGQVGMHLRGTHHWLMLR*PARAAN Trigger: ATTGGCAGCTCTTGCTGGTCACCTTAGCATCAACCA...GTGGTGAGTTCCCCTGAGGTGCATGCCCACCTGCCCCAGCCCGTGTGCTTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR TCA 90 bp | CACCAGCCCTGGTCCCAGGAAGCCGTTAGCCGCTACTTCTACTGTAAGGTAATGAGCGAGAGTGTGGAGTaGAAGGGGCCGGGAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HQPWSQEAVSRYFYCKVMSESVE*KGPGAQ Trigger: TTGGGCTCCCGGCCCCTTTCACTCCACACTCTCGCT...CATTACCTTACAGTAGAAGTAGCGGCTAACGGCTTCCTGGGACCAGGGCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR TCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGAAAGAGGTGGAGCCCTaGGAACCGGAGGAAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMKEVEP*EPEENI Trigger: GATGTTTTCCTCCGGTTCTCAGGGCTCCACCTCTTT...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGTGGCAGTACCGGGCCTaGTCTCCTGTACCAATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMWQYRA*SPVPMN Trigger: ATTCATTGGTACAGGAGAGCAGGCCCGGTACTGCCA...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | AAAAATACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGAGCGTCCCCTACATCTaGCCTGCTAGCCCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KNTVASPPSVRHLALPFPSVPYI*PASPLQ Trigger: CTGCAGGGGGCTAGCAGGGCAGATGTAGGGGACGCT...CGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGTATTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | AAAAATACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGAGTGGCAGCACCAGTTaGACCCGGGTAGCCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KNTVASPPSVRHLALPFPSGSTS*TRVASV Trigger: CACCGAGGCTACCCGGGTGCAACTGGTGCTGCCACT...CGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGTATTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGCAACAGGGTGAGCAATaGATGTTCTCGAGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMQQGEQ*MFSRLQ Trigger: CTGGAGCCTCGAGAACATGCATTGCTCACCCTGTTG...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | GAGGTGAAGGGACTAAGACCCAAGGTGCTAAGTAGCTTGCTCACAGAATGTGGCCTGCGAAGGGGCCTCTaGTCGCACAGCGAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVKGLRPKVLSSLLTECGLRRGL*SHSEPG Trigger: GCCTGGCTCGCTGTGCGAGCAGAGGCCCCTTCGCAG...GCCACATTCTGTGAGCAAGCTACTTAGCACCTTGGGTCTTAGTCCCTTCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | CACCAGCCCTGGTCCCAGGAAGCCGTTAGCCGCTACTTCTACTGTAAGGTAATGCCCTCTGCTGAAGCCTaGCGGTCAAATCTGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HQPWSQEAVSRYFYCKVMPSAEA*RSNLPP Trigger: CGGGGGCAGATTTGACCGGCAGGCTTCAGCAGAGGG...CATTACCTTACAGTAGAAGTAGCGGCTAACGGCTTCCTGGGACCAGGGCTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTACAAGAGCTGCCAATCTaGGGGCCTGCACATATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLQELPI*GPAHMC Trigger: ACACATATGTGCAGGCCCCCAGATTGGCAGCTCTTG...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGAGGCTCCAGAACACTaGCAGCAAAGGCCTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMEAPEH*QQRPQE Trigger: TTCTTGAGGCCTTTGCTGCCAGTGTTCTGGAGCCTC...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTAGAGGCTCCAGAACACTaGCAGCAAAGGCCTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLEAPEH*QQRPQE Trigger: TTCTTGAGGCCTTTGCTGCCAGTGTTCTGGAGCCTC...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGCCCCTCGCTGCCCTGTaGAGTAGAGTAACCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNTVASPPSVRHLALPFPPLAAL*SRVTEG Trigger: TCCCTCGGTTACTCTACTTCACAGGGCAGCGAGGGG...CGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGTATTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | CACCAGCCCTGGTCCCAGGAAGCCGTTAGCCGCTACTTCTACTGTAAGGTAATGGCCCCAAAGTGTGTGTaGAGGTGGCGCAGGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HQPWSQEAVSRYFYCKVMAPKCV*RWRRVS Trigger: AGAGACCCTGCGCCACCTTCACACACACTTTGGGGC...CATTACCTTACAGTAGAAGTAGCGGCTAACGGCTTCCTGGGACCAGGGCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR TCA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGTGGTTGATGCTAAGGTaGCCAGCAAGAGCTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGKPSICPSPCLALPGAMWLMLR*PARAAN Trigger: ATTGGCAGCTCTTGCTGGTCACCTTAGCATCAACCA...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTAAGACCAACAACAGGGTaGGCAATGCATGTTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLRPTTG*AMHVLE Trigger: CTCGAGAACATGCATTGCTCACCCTGTTGTTGGTCT...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | GATCTCAAGGTGAAGTGGGGCTCCGGGAGCACTGATGCGAAGACAAGCACACGGGGGAGATCTCTGTGGTaGCAGAGCAGGGTTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: DLKVKWGSGSTDAKTSTRGRSLW*QSRVEL Trigger: GAGTTCAACCCTGCTCTGTCACCACAGAGATCTCCC...CCGTGTGCTTGTCTTCGCATCAGTGCTCCCGGAGCCCCACTTCACCTTGAGATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCCTGGCTCGCTGCCATCAGCACCCAGGATTCTGACTTGCCCTCAGCTTCTTGGCAGTACCGGGCCTaGTCTCCTGTACCAATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PAWLAAISTQDSDLPSASWQYRA*SPVPMN Trigger: ATTCATTGGTACAGGAGAGCAGGCCCGGTACTGCCA...AGAAGCTGAGGGCAAGTCAGAATCCTGGGTGCTGATGGCAGCGAGCCAGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | GACCCCAAAGGCTACGTCCAAGACCTGCTCCGCTCCCAGAGCCGTGATCTCAAGCAACAGGGTGAGCAATaGATGTTCTCGAGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DPKGYVQDLLRSQSRDLKQQGEQ*MFSRLQ Trigger: CTGGAGCCTCGAGAACATGCATTGCTCACCCTGTTG...CTTGAGATCACGGCTCTGGGAGCGGAGCAGGTCTTGGACGTAGCCTTTGGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | TGCCTGTTTCTCTACCTCCAGCCTGGCTCGCTGCCATCAGCACCCAGGATTCTGCTGCCAGCCCGAGATTaGATTCATACGGCAGCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLFLYLQPGSLPSAPRILLPARD*IHTAAV Trigger: AACCGCTGCCGTATGAATGCAATCTCGGGCTGGCAG...CAGAATCCTGGGTGCTGATGGCAGCGAGCCAGGCTGGAGGTAGAGAAACAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | ATGCCTGTTTCTCTACCTCCAGCCTGGCTCGCTGCCATCAGCACCCAGGATTCTCGATACTGTTGCCCCTaGTGCTGTGAGACACAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MPVSLPPAWLAAISTQDSRYCCP*CCETQP Trigger: CGGCTGTGTCTCACAGCACCAGGGGCAACAGTATCG...AGAATCCTGGGTGCTGATGGCAGCGAGCCAGGCTGGAGGTAGAGAAACAGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGCTCGAAGCGAGAGTGTaGAGTGAAAGGGGCCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNTVASPPSVRHLALPFPLEARV*SERGRE Trigger: CTCCCGGCCCCTTTCACTCCACACTCTCGCTTCGAG...CGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGTATTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTAAGTAACCGAGGGAAGTaGTGTGCTACTGTACGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLSNRGK*CATVRL Trigger: TAACCGTACAGTAGCACATCACTTCCCTCGGTTACT...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGAAGGGGAAGGCAGTGGAAGCCGGCAGACAAATTCTCCACAACCCTACCCAACTCCAGAGCACTaGAGCGTTTGTGGAGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GREGEGSGSRQTNSPQPYPTPEH*SVCGAG Trigger: ACCGGCTCCACAAACGCTTCAGTGCTCTGGAGTTGG...GTAGGGTTGTGGAGAATTTGTCTGCCGGCTTCCACTGCCTTCCCCTTCTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR TCA 90 bp | CACCAGCCCTGGTCCCAGGAAGCCGTTAGCCGCTACTTCTACTGTAAGGTAATGGAAGCAGCCCTCTGCTaGAGCCTGCCGGTCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: HQPWSQEAVSRYFYCKVMEAALC*SLPVKS Trigger: AGATTTGACCGGCAGGCTTCAGCAGAGGGCTGCTTC...CATTACCTTACAGTAGAAGTAGCGGCTAACGGCTTCCTGGGACCAGGGCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGAAGCAGCCCTCTGCTaGAGCCTGCCGGTCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: KNTVASPPSVRHLALPFPEAALC*SLPVKS Trigger: AGATTTGACCGGCAGGCTTCAGCAGAGGGCTGCTTC...CGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGTATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | AAAAATACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGCAGGAGGCTCAGGCTaGATCCCAGAGACAGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KNTVASPPSVRHLALPFPAGGSG*IPETVL Trigger: TAGGACTGTCTCTGGGATGCAGCCTGAGCCTCCTGC...CGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGTATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | GGTGTACCATGGACATCAGAGGCTGGACTTCTCTGGCAGCGTGGACCCATCAGAGTATTCCATGCCCCTTaGAGGGTCAAAGCGCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GVPWTSEAGLLWQRGPIRVFHAP*RVKAPV Trigger: TACCGGCGCTTTGACCCTGCAAGGGGCATGGAATAC...TCTGATGGGTCCACGCTGCCAGAGAAGTCCAGCCTCTGATGTCCATGGTACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | TGGTGTACCATGGACATCAGAGGCTGGACTTCTCTGGCAGCGTGGACCCATCAGCGAGGGTGTATTCCATaGCCCTTGCAGGGTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WCTMDIRGWTSLAAWTHQRGCIP*PLQGQS Trigger: GCTTTGACCCTGCAAGGGGCATGGAATACACCCTCG...CTGATGGGTCCACGCTGCCAGAGAAGTCCAGCCTCTGATGTCCATGGTACACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGATTCTGTGGCCCTCCTaGCTTCCCCACAGCCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KNTVASPPSVRHLALPFPILWPS*LPHSLY Trigger: GTAGAGGCTGTGGGGAAGCCAGGAGGGCCACAGAAT...CGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGTATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | GATCTCAAGGTGAAGTGGGGCTCCGGGAGCACTGATGCGAAGACAAGCACACGGCAGGGTCCCTATTCTTaGCCAGTTCGAAGGAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLKVKWGSGSTDAKTSTRQGPYS*PVRRSD Trigger: ATCGCTCCTTCGAACTGGCCAAGAATAGGGACCCTG...CCGTGTGCTTGTCTTCGCATCAGTGCTCCCGGAGCCCCACTTCACCTTGAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTGGCTCGCTGCCATCAGCACCCAGGATTCTGACTTGCCCTCAGCTTCTGTCAGGTTCCGGATCTaGGCCTGCAGTTGTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: PAWLAAISTQDSDLPSASVRFRI*ACSCSI Trigger: AATAGAACAACTGCAGGCCCAGATCCGGAACCTGAC...AGAAGCTGAGGGCAAGTCAGAATCCTGGGTGCTGATGGCAGCGAGCCAGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | GAGGTGAAGGGACTAAGACCCAAGGTGCTAAGTAGCTTGCTCACAGAATGTGGCCTTGGGAGCCCCGTCTaGACAGGCGAAGGTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVKGLRPKVLSSLLTECGLGSPV*TGEGVL Trigger: CAACACACCTTCGCCTGTGCAGACGGGGCTCCCAAG...GCCACATTCTGTGAGCAAGCTACTTAGCACCTTGGGTCTTAGTCCCTTCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTAATGAATTCCTCTGCATaGCCTAAGTACAGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVASPPSVRHLALPFPGLMNSSA*PKYRSW Trigger: CCAAGACCTGTACTTAGGCCATGCAGAGGAATTCAT...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGCACTGAAGCGTTTGTaGAGCCGGTACATGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KNTVASPPSVRHLALPFPALKRL*SRYMRV Trigger: CACCCTCATGTACCGGCTCCACAAACGCTTCAGTGC...CGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGTATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGAAAGAGGTGGAGCCCTaGGAACCGGAGGAAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: KNTVASPPSVRHLALPFPKEVEP*EPEENI Trigger: GATGTTTTCCTCCGGTTCTCAGGGCTCCACCTCTTT...CGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGTATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR GCA 90 bp | AAGACAAGCACACGGGCTGGGGCAGGTGGGCATGCACCTCAGGGGAACTCACCAACATATGTGTCGTCCTaGATGATGAAGAACCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTSTRAGAGGHAPQGNSPTYVSS*MMKNQS Trigger: TGACTGGTTCTTCATCATGCAGGACGACACATATGT...TGGTGAGTTCCCCTGAGGTGCATGCCCACCTGCCCCAGCCCGTGTGCTTGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGACTAAGACCCAAGGTGCTAAGTAGCTTGCTCACAGAATGTGGCAGACGTCTCGAAGCGAGAGTGTaGAGTGAAAGGGGCCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGLRPKVLSSLLTECGRRLEARV*SERGRE Trigger: CTCCCGGCCCCTTTCACTCCACACTCTCGCTTCGAG...ACGTCTGCCACATTCTGTGAGCAAGCTACTTAGCACCTTGGGTCTTAGTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| 3UTR CAA 72 bp | GAGGTGAAGGGACTAAGACCCAAGGTGCTAAGTAGCTaGCTCACAGAATGTGGCAGACGTAAGGCCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVKGLRPKVLSS*LTECGRRKAPA Trigger: TGCAGGGGCCTTACGTCTGCCACATTCTGTGAGCAAGCTACTTAGCACCTTGGGTCTTAGTCCCTTCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR TCA 90 bp | CACCAGCCCTGGTCCCAGGAAGCCGTTAGCCGCTACTTCTACTGTAAGGTAATGAGACCAACAACAGGGTaGGCAATGCATGTTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HQPWSQEAVSRYFYCKVMRPTTG*AMHVLE Trigger: CTCGAGAACATGCATTGCTCACCCTGTTGTTGGTCT...CATTACCTTACAGTAGAAGTAGCGGCTAACGGCTTCCTGGGACCAGGGCTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | AATTCTCCACAACCCTACCACAGATTCTTCTTCTTACCCCTCTCCCTAGACCTATCCATGAGTCGCACCTaGGAAGGGGCCTCTGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NSPQPYHRFFFLPLSLDLSMSRT*EGASAR Trigger: GCGAGCAGAGGCCCCTTCGCAGGTGCGACTCATGGA...TAGGTCTAGGGAGAGGGGTAAGAAGAAGAATCTGTGGTAGGGTTGTGGAGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| CDS-3UTR GCA 90 bp | AAGGGACTAAGACCCAAGGTGCTAAGTAGCTTGCTCACAGAATGTGGCAGACGTCGCAGAGAGAACTTCTaGACCAGCCCTGGCTCTACG | + |
|
Preference number: 4 (lower is better) Translates to: KGLRPKVLSSLLTECGRRRRENF*TSPGST Trigger: CGTAGAGCCAGGGCTGGTGCAGAAGTTCTCTCTGCG...ACGTCTGCCACATTCTGTGAGCAAGCTACTTAGCACCTTGGGTCTTAGTCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGTCAGGTTCCGGATCTaGGCCTGCAGTTGTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: KNTVASPPSVRHLALPFPVRFRI*ACSCSI Trigger: AATAGAACAACTGCAGGCCCAGATCCGGAACCTGAC...CGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGTATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS-3UTR CCA 90 bp | GTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGTCACGTAACAGACAGCAGCATGAATTCCTCTGCATaGCCTAAGTACAGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRKVGRAGWIKGHVTDSSMNSSA*PKYRSW Trigger: CCAAGACCTGTACTTAGGCCATGCAGAGGAATTCAT...GCTGCTGTCTGTTACGTGACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| CDS-3UTR TCA 90 bp | CTCTCCCTAGACCTAAAAACAGTTTGGCAGAAGATACGTTTAATAACATTTCTTTGTGGAGCCGGTACATaGGGGTGCCCTCGGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: LSLDLKTVWQKIRLITFLCGAGT*GCPRGP Trigger: CGGTCCCCGAGGGCACCCTCATGTACCGGCTCCACA...AAGAAATGTTATTAAACGTATCTTCTGCCAAACTGTTTTTAGGTCTAGGGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCTAGACCTAAAAACAGTTTGGCAGAAGATACGTTTAATAACATTTCTTCTCCTCTTCCTGGCCTaGCAGTTCGCCAGCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSLDLKTVWQKIRLITFLLLFLA*QFASQP Trigger: CGGCTGGCTGGCGAACTGGCAGGCCAGGAAGAGGAG...AAGAAATGTTATTAAACGTATCTTCTGCCAAACTGTTTTTAGGTCTAGGGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCTTCTTGTGGTCTTTCCAGAACGAAAGGATCGTTACTAGCTACTGTGTCTAGTAACCGAGGGAAGTaGTGTGCTACTGTACGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SASCGLSRTKGSLLATVSSNRGK*CATVRL Trigger: TAACCGTACAGTAGCACATCACTTCCCTCGGTTACT...AGACACAGTAGCTAGTAACGATCCTTTCGTTCTGGAAAGACCACAAGAAGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCTAGACCTAAAAACAGTTTGGCAGAAGATACGTTTAATAACATTTCTTGCAGGAGGCTCAGGCTaGATCCCAGAGACAGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLDLKTVWQKIRLITFLAGGSG*IPETVL Trigger: TAGGACTGTCTCTGGGATGCAGCCTGAGCCTCCTGC...AAGAAATGTTATTAAACGTATCTTCTGCCAAACTGTTTTTAGGTCTAGGGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCTAGACCTAAAAACAGTTTGGCAGAAGATACGTTTAATAACATTTCTTTCTTCTCCCTCACCCTaGATCCAGGAAACCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLDLKTVWQKIRLITFLSSPSP*IQETRR Trigger: CCTGCGGGTTTCCTGGATCCAGGGTGAGGGAGAAGA...AAGAAATGTTATTAAACGTATCTTCTGCCAAACTGTTTTTAGGTCTAGGGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCTAGACCTAAAAACAGTTTGGCAGAAGATACGTTTAATAACATTTCTTTACTGTTGCCCCTGGTaGTGTGAGACACAGCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSLDLKTVWQKIRLITFLYCCPW*CETQPM Trigger: CATCGGCTGTGTCTCACAGCACCAGGGGCAACAGTA...AAGAAATGTTATTAAACGTATCTTCTGCCAAACTGTTTTTAGGTCTAGGGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
||
| CDS TCA 90 bp | GAAGCCGCTGCTTCCGGAAGCGCAGGCGGGGCTGATAGCGCCGATTaGGCTGCTCCAGAGCTGTGTCCACAGCGTCCCCTACATCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EAAASGSAGGADSAD*AAPELCPQRPLHLP Trigger: GGGCAGATGTAGGGGACGCTGTGGACACAGCTCTGGAGCAGCTCAATCGGCGCTATCAGCCCCGCCTGCGCTTCCGGAAGCAGCGGCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS GCA 90 bp | TTTCTTGGAGATGACATCCATGAGTCGCACCTGCGAAGGGGCCTCTaGTCGCACAGCGAGCCAGGCCAGCCTCGCCCCTGGGTACCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FLGDDIHESHLRRGL*SHSEPGQPRPWVPS Trigger: CGACGGTACCCAGGGGCGAGGCTGGCCTGGCTCGCTGTGCGAGCAGAGGCCCCTTCGCAGGTGCGACTCATGGATGTCATCTCCAAGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR CAA 90 bp | AGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGAGTGGCAGCACCAGTaGCACCCGGGTAGCCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SGKPSICPSPCLALPGAMEWQHQ*HPGSLG Trigger: ACCGAGGCTACCCGGGTGCAACTGGTGCTGCCACTC...CATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS TCA 90 bp | CTCAGCAGGCTCACTCTGCGGGCCAGGGAGCGTCTGTGCCCTCGCTaGGTCACAGCTTCCAGCAGCAAGTCGAGGGTGTATTCCATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSRLTLRARERLCPR*VTASSSKSRVYSMP Trigger: GGGCATGGAATACACCCTCGACTTGCTGCTGGAAGCTGTGACTCAGCGAGGGCACAGACGCTCCCTGGCCCGCAGAGTGAGCCTGCTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS GCA 90 bp | GTGTCCACAGGGTGTTTCTTGGAGATGACATCCATGAGTCGCACCTaGGAAGGGGCCTCTGCTCGCACAGCGAGCCAGGCCAGCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSTGCFLEMTSMSRT*EGASARTASQASLA Trigger: GGCGAGGCTGGCCTGGCTCGCTGTGCGAGCAGAGGCCCCTTCGCAGGTGCGACTCATGGATGTCATCTCCAAGAAACACCCTGTGGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS GCA 90 bp | AGTTCCTCGCTGAGCCGGGGGCTACAGTCCCGCAGAGAGAACTTCTaGACCAGCCCTGGCTCTACGGCTCGAAAGAGGTGGAGCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSLSRGLQSRRENF*TSPGSTARKRWSPE Trigger: CTCAGGGCTCCACCTCTTTCGAGCCGTAGAGCCAGGGCTGGTGCAGAAGTTCTCTCTGCGGGACTGTAGCCCCCGGCTCAGCGAGGAACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS TCA 90 bp | CAGGGCCCCCTCGGCCTTCCCGGGGCCCATAGACCAACAACAGGGTaGGCAATGCATGTTCTCGAGGCTCCAGAACACTGGCAGCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGPLGLPGAHRPTTG*AMHVLEAPEHWQQR Trigger: CCTTTGCTGCCAGTGTTCTGGAGCCTCGAGAACATGCATTGCTCACCCTGTTGTTGGTCTATGGGCCCCGGGAAGGCCGAGGGGGCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS TCA 90 bp | CTTCTGCACCAGCCCTGGCTCTACGGCTCGAAAGAGGTGGAGCCCTaGGAACCGGAGGAAAACATCCATCACCTCCAGCCCCTCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLHQPWLYGSKEVEP*EPEENIHHLQPLQG Trigger: GCCCTGGAGGGGCTGGAGGTGATGGATGTTTTCCTCCGGTTCTCAGGGCTCCACCTCTTTCGAGCCGTAGAGCCAGGGCTGGTGCAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR CAA 90 bp | GTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATGGTCAGGGTCCCTATTCTaGGCCAGTTCGAAGGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: VASPPSVRHLALPFPGLWSGSLF*ASSKER Trigger: TCGCTCCTTCGAACTGGCCAAGAATAGGGACCCTGA...CCATAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR CAA 90 bp | GTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGTCACGTAACAGACAGCAGCGAGTGGCAGCACCAGTaGCACCCGGGTAGCCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: VRKVGRAGWIKGHVTDSSEWQHQ*HPGSLG Trigger: ACCGAGGCTACCCGGGTGCAACTGGTGCTGCCACTC...GCTGCTGTCTGTTACGTGACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| CDS-3UTR CAA 90 bp | GCCCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGTCCACAGGGTGTTTCTaGGAGATGACATCCATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AREQASGWTSHSAQHRPWSTGCF*EMTSMS Trigger: ACTCATGGATGTCATCTCCAAGAAACACCCTGTGGA...CCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| CDS-3UTR CAA 90 bp | GTACCATGGACATCAGAGGCTGGACTTCTCTGGCAGCGTGGACCCATCAGACCACCCAGCCCCTCCAGATaGCTGAGGCGACAACGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPWTSEAGLLWQRGPIRPPSPSR*LRRQRW Trigger: CCACCGTTGTCGCCTCAGCAATCTGGAGGGGCTGGG...TGGTCTGATGGGTCCACGCTGCCAGAGAAGTCCAGCCTCTGATGTCCATGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| CDS TCA 90 bp | AGTCTGCCCCAAAGTGTGTGTGAAGGTGGCGCAGGGTCTCTGACATaGGCCAGGCAGGCCGCTCATCTCCATGAGACACCACCTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SLPQSVCEGGAGSLT*ARQAAHLHETPPAS Trigger: GGATGCAGGTGGTGTCTCATGGAGATGAGCGGCCTGCCTGGCTCATGTCAGAGACCCTGCGCCACCTTCACACACACTTTGGGGCAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS GCA 90 bp | CCCTCGGCCTTCCCGGGGCCCATAGACCAACAACAGGGTGAGCAATaGATGTTCTCGAGGCTCCAGAACACTGGCAGCAAAGGCCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSAFPGPIDQQQGEQ*MFSRLQNTGSKGLK Trigger: CTTGAGGCCTTTGCTGCCAGTGTTCTGGAGCCTCGAGAACATGCATTGCTCACCCTGTTGTTGGTCTATGGGCCCCGGGAAGGCCGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR CAA 90 bp | AAAAATACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGCCCAGCCCCTCCAGATaGCTGAGGCGACAACGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KNTVASPPSVRHLALPFPPSPSR*LRRQRW Trigger: CCACCGTTGTCGCCTCAGCAATCTGGAGGGGCTGGG...CGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGTATTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS TCA 90 bp | GTCATAGTCTGCCCCAAAGTGTGTGTGAAGGTGGCGCAGGGTCTCTaGCATGAGCCAGGCAGGCCGCTCATCTCCATGAGACACCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: VIVCPKVCVKVAQGL*HEPGRPLISMRHHL Trigger: CAGGTGGTGTCTCATGGAGATGAGCGGCCTGCCTGGCTCATGTCAGAGACCCTGCGCCACCTTCACACACACTTTGGGGCAGACTATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS GCA 90 bp | AGTCACAGCTTCCAGCAGCAAGTCGAGGGTGTATTCCATGCCCCTTaGAGGGTCAAAGCGCCGGTAGCCATTGAGAAGCCGCTGCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SHSFQQQVEGVFHAP*RVKAPVAIEKPLLP Trigger: CGGAAGCAGCGGCTTCTCAATGGCTACCGGCGCTTTGACCCTGCAAGGGGCATGGAATACACCCTCGACTTGCTGCTGGAAGCTGTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR CAA 90 bp | CCACGGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTAAGGTGCGGCCTGAGCGGTCCAGCCCATTTTTaGAGTCTGGATTCTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRPTSRRSVLWTVRCGLSGPAHF*SLDSVA Trigger: GGCCACAGAATCCAGACTCAAAAAATGGGCTGGACC...GCTCAGGCCGCACCTTACTGTCCAGAGCACTGATCTCCTGCTGGTTGGCCGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| CDS-3UTR CAA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTAGGTCCAGCCCATTTTTaGAGTCTGGATTCTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TVASPPSVRHLALPFPGLGPAHF*SLDSVA Trigger: GGCCACAGAATCCAGACTCAAAAAATGGGCTGGACC...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR CAA 90 bp | ACAGTGGCAAGCCCTCCATCTGTCCGTCACCTTGCCTTGCCCTTCCCGGGGCTATCCACAGGGTGTTTCTaGGAGATGACATCCATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TVASPPSVRHLALPFPGLSTGCF*EMTSMS Trigger: ACTCATGGATGTCATCTCCAAGAAACACCCTGTGGA...TAGCCCCGGGAAGGGCAAGGCAAGGTGACGGACAGATGGAGGGCTTGCCACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR CAA 90 bp | GAGGTGAAGGGACTAAGACCCAAGGTGCTAAGTAGCTTGCTCACAGAATGTGGCTCAGGGTCCCTATTCTaGGCCAGTTCGAAGGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: EVKGLRPKVLSSLLTECGSGSLF*ASSKER Trigger: TCGCTCCTTCGAACTGGCCAAGAATAGGGACCCTGA...GCCACATTCTGTGAGCAAGCTACTTAGCACCTTGGGTCTTAGTCCCTTCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| CDS TCA 90 bp | AATTCCTCTGCATGGCCTAAGTACAGGTCTTGGTTGATGCTAAGGTaGCCAGCAAGAGCTGCCAATCTGGGGGCCTGCACATATGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: NSSAWPKYRSWLMLR*PARAANLGACTYVS Trigger: CGACACATATGTGCAGGCCCCCAGATTGGCAGCTCTTGCTGGTCACCTTAGCATCAACCAAGACCTGTACTTAGGCCATGCAGAGGAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS-3UTR CAA 90 bp | AATTCTCCACAACCCTACCACAGATTCTTCTTCTTACCCCTCTCCCTAGACCTAGATCTGGGCCTGCAGTaGTTCTATTTCGCTGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSPQPYHRFFFLPLSLDLDLGLQ*FYFAVS Trigger: GCTTACAGCGAAATAGAACAACTGCAGGCCCAGATC...TAGGTCTAGGGAGAGGGGTAAGAAGAAGAATCTGTGGTAGGGTTGTGGAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088295.9 |
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| CDS GCA 72 bp | GATGACATCCATGAGTCGCACCTGCGAAGGGGCCTCTaGTCGCACAGCGAGCCAGGCCAGCCTCGCCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: DDIHESHLRRGL*SHSEPGQPRPW Trigger: CCAGGGGCGAGGCTGGCCTGGCTCGCTGTGCGAGCAGAGGCCCCTTCGCAGGTGCGACTCATGGATGTCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS TCA 72 bp | AGTCCCAGCCCAGCACCTCGAAGCGAGAGTGTGGAGTaGAAGGGGCCGGGAGCCCAACAGGCCAGCTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPSPAPRSESVE*KGPGAQQASLA Trigger: GGCTAAGCTGGCCTGTTGGGCTCCCGGCCCCTTTCACTCCACACTCTCGCTTCGAGGTGCTGGGCTGGGACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 ENSMUST00000197318.2 |
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| CDS TCA 72 bp | GCTTCCGGAAGCGCAGGCGGGGCTGATAGCGCCGATTaGGCTGCTCCAGAGCTGTGTCCACAGCGTCCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: ASGSAGGADSAD*AAPELCPQRPL Trigger: TAGGGGACGCTGTGGACACAGCTCTGGAGCAGCTCAATCGGCGCTATCAGCCCCGCCTGCGCTTCCGGAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS GCA 72 bp | AGGCCGCTCATCTCCATGAGACACCACCTGCATCCCTaGAGGAGCCCGGGCCCCTCGCTGCCCTGTGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: RPLISMRHHLHP*RSPGPSLPCEV Trigger: TACTTCACAGGGCAGCGAGGGGCCCGGGCTCCTGCAGGGATGCAGGTGGTGTCTCATGGAGATGAGCGGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS TCA 72 bp | GGTGCTGTGAGACACAGCCGATGCCCAGAGTGTCGATaGGGCAGCGGCCAAGCCATTCATCAGGCCGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GAVRHSRCPECR*GSGQAIHQAGH Trigger: GTGCCCGGCCTGATGAATGGCTTGGCCGCTGCCTCATCGACACTCTGGGCATCGGCTGTGTCTCACAGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS TCA 72 bp | GCATCCCTGCAGGAGCCCGGGCCCCTCGCTGCCCTGTaGAGTAGAGTAACCGAGGGAAGTGATGTGCTACTG | + |
|
Preference number: 6 (lower is better) Translates to: ASLQEPGPLAAL*SRVTEGSDVLL Trigger: CAGTAGCACATCACTTCCCTCGGTTACTCTACTTCACAGGGCAGCGAGGGGCCCGGGCTCCTGCAGGGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS GCA 72 bp | GGGTGTTTCTTGGAGATGACATCCATGAGTCGCACCTaGGAAGGGGCCTCTGCTCGCACAGCGAGCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GCFLEMTSMSRT*EGASARTASQA Trigger: GGCCTGGCTCGCTGTGCGAGCAGAGGCCCCTTCGCAGGTGCGACTCATGGATGTCATCTCCAAGAAACACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS TCA 72 bp | CAGCCCTGGCTCTACGGCTCGAAAGAGGTGGAGCCCTaGGAACCGGAGGAAAACATCCATCACCTCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QPWLYGSKEVEP*EPEENIHHLQP Trigger: GGGCTGGAGGTGATGGATGTTTTCCTCCGGTTCTCAGGGCTCCACCTCTTTCGAGCCGTAGAGCCAGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS CCA 72 bp | CCCACAGCCTCTACACAGGGATCTTCTCCCTCACCCTaGATCCAGGAAACCCGCAGGAGGCTCAGGCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PTASTQGSSPSP*IQETRRRLRLH Trigger: ATGCAGCCTGAGCCTCCTGCGGGTTTCCTGGATCCAGGGTGAGGGAGAAGATCCCTGTGTAGAGGCTGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS TCA 72 bp | TGCCCCAAAGTGTGTGTGAAGGTGGCGCAGGGTCTCTaGCATGAGCCAGGCAGGCCGCTCATCTCCATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: CPKVCVKVAQGL*HEPGRPLISMR Trigger: TCTCATGGAGATGAGCGGCCTGCCTGGCTCATGTCAGAGACCCTGCGCCACCTTCACACACACTTTGGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS TCA 72 bp | CTCGGCCTTCCCGGGGCCCATAGACCAACAACAGGGTaGGCAATGCATGTTCTCGAGGCTCCAGAACACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LGLPGAHRPTTG*AMHVLEAPEHW Trigger: CCAGTGTTCTGGAGCCTCGAGAACATGCATTGCTCACCCTGTTGTTGGTCTATGGGCCCCGGGAAGGCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
||
| CDS TCA 72 bp | ATCAGCCCCAGGGACACCTGGGGGAGATCTCTGTGGTaGCAGAGCAGGGTTGAACTCCTGAAAGTGGACCGG | + |
|
Preference number: 6 (lower is better) Translates to: ISPRDTWGRSLW*QSRVELLKVDR Trigger: CCGGTCCACTTTCAGGAGTTCAACCCTGCTCTGTCACCACAGAGATCTCCCCCAGGTGTCCCTGGGGCTGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS TCA 72 bp | CACCTGGGGGAGATCTCTGTGGTGACAGAGCAGGGTTaGACTCCTGAAAGTGGACCGGAAAGAAGGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: HLGEISVVTEQG*TPESGPERRPA Trigger: GGCAGGCCTTCTTTCCGGTCCACTTTCAGGAGTTCAACCCTGCTCTGTCACCACAGAGATCTCCCCCAGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS CAA 90 bp | GTCCACACGGTGGTAAGGAAGAAGAGTGTGTCCACAGGGTGTTTCTaGGAGATGACATCCATGAGTCGCACCTGCGAAGGGGCCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VHTVVRKKSVSTGCF*EMTSMSRTCEGASA Trigger: AGCAGAGGCCCCTTCGCAGGTGCGACTCATGGATGTCATCTCCAAGAAACACCCTGTGGACACACTCTTCTTCCTTACCACCGTGTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS TCA 72 bp | GCATGGCCTAAGTACAGGTCTTGGTTGATGCTAAGGTaGCCAGCAAGAGCTGCCAATCTGGGGGCCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: AWPKYRSWLMLR*PARAANLGACT Trigger: TGTGCAGGCCCCCAGATTGGCAGCTCTTGCTGGTCACCTTAGCATCAACCAAGACCTGTACTTAGGCCATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS GCA 72 bp | TTCCCGGGGCCCATAGACCAACAACAGGGTGAGCAATaGATGTTCTCGAGGCTCCAGAACACTGGCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: FPGPIDQQQGEQ*MFSRLQNTGSK Trigger: TTTGCTGCCAGTGTTCTGGAGCCTCGAGAACATGCATTGCTCACCCTGTTGTTGGTCTATGGGCCCCGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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| CDS CAA 72 bp | GTGGTAAGGAAGAAGAGTGTGTCCACAGGGTGTTTCTaGGAGATGACATCCATGAGTCGCACCTGCGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: VVRKKSVSTGCF*EMTSMSRTCEG Trigger: CCCTTCGCAGGTGCGACTCATGGATGTCATCTCCAAGAAACACCCTGTGGACACACTCTTCTTCCTTACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088295.9 ENSMUST00000121863.5 |
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