Pregenerated sensors for CHPF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032997Ensembl transcript IDs: ENSMUST00000079205.14, ENSMUST00000094818.4, ENSMUST00000124042.2, ENSMUST00000138683.2
Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCGGGCACCAGGGAAACGCCGCTCTAGCTCTGCCACGTGGGCCTTaGCAGGTGCGAAGACGTCTGAGTGGGCTGCCCGCTGGGCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: PGHQGNAALALPRGP*QVRRRLSGLPAGPG Trigger: GCCAGGCCCAGCGGGCAGCCCACTCAGACGTCTTCGCACCTGTCAAGGCCCACGTGGCAGAGCTAGAGCGGCGTTTCCCTGGTGCCCGGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CCA 90 bp | CAGGGCACCCGGGCACCAGGGAAACGCCGCTCTAGCTCTGCCACGTaGGCCTTGACAGGTGCGAAGACGTCTGAGTGGGCTGCCCGCTGG | + |
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Preference number: 1 (lower is better) Translates to: QGTRAPGKRRSSSAT*ALTGAKTSEWAARW Trigger: CCAGCGGGCAGCCCACTCAGACGTCTTCGCACCTGTCAAGGCCCACGTGGCAGAGCTAGAGCGGCGTTTCCCTGGTGCCCGGGTGCCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CCA 90 bp | GGCCGAAGGAGCTGCACCCTGCGGGTGAGGGGCCAGCGGCCACCCTaGGGTGTCAGCGCTTCCAGCTGCAGGTCTAGTGTGTACTCCATG | + |
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Preference number: 1 (lower is better) Translates to: GRRSCTLRVRGQRPP*GVSASSCRSSVYSM Trigger: CATGGAGTACACACTAGACCTGCAGCTGGAAGCGCTGACACCCCAGGGTGGCCGCTGGCCCCTCACCCGCAGGGTGCAGCTCCTTCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CCA 90 bp | ACGTGGGCCTTGACAGGTGCGAAGACGTCTGAGTGGGCTGCCCGCTaGGCCTGGCGTGGCTCATACAGCAGCAGCAGGGTCAAGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: TWALTGAKTSEWAAR*AWRGSYSSSRVKAA Trigger: AGCAGCCTTGACCCTGCTGCTGCTGTATGAGCCACGCCAGGCCCAGCGGGCAGCCCACTCAGACGTCTTCGCACCTGTCAAGGCCCACGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CCA 90 bp | TCTAGCTCTGCCACGTGGGCCTTGACAGGTGCGAAGACGTCTGAGTaGGCTGCCCGCTGGGCCTGGCGTGGCTCATACAGCAGCAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SSSATWALTGAKTSE*AARWAWRGSYSSSR Trigger: CCTGCTGCTGCTGTATGAGCCACGCCAGGCCCAGCGGGCAGCCCACTCAGACGTCTTCGCACCTGTCAAGGCCCACGTGGCAGAGCTAGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CCA 90 bp | GCCTTGACAGGTGCGAAGACGTCTGAGTGGGCTGCCCGCTGGGCCTaGCGTGGCTCATACAGCAGCAGCAGGGTCAAGGCTGCTGCATCA | + |
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Preference number: 1 (lower is better) Translates to: ALTGAKTSEWAARWA*RGSYSSSRVKAAAS Trigger: TGATGCAGCAGCCTTGACCCTGCTGCTGCTGTATGAGCCACGCCAGGCCCAGCGGGCAGCCCACTCAGACGTCTTCGCACCTGTCAAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR TCA 90 bp | TGGCATCAAGGATGCAGCGGCCCAACCACTCATCCGGGCGAGCACTaGCGATGTCGTTGCGGCAGCTTTCCAGGTGGGGGCGCAGTTGCT | + |
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Preference number: 1 (lower is better) Translates to: WHQGCSGPTTHPGEH*RCRCGSFPGGGAVA Trigger: AGCAACTGCGCCCCCACCTGGAAAGCTGCCGCAACGACATCGTCAGTGCTCGCCCGGATGAGTGGTTGGGCCGCTGCATCCTTGATGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR GCA 90 bp | GTGCTTCTTGGACAGCAGATCCATGAGACGCAGTGGAGAGGGCGCTaGTGTCTGCACACTGAGCCAGGGCACCCGGGCACCAGGGAAACG | + |
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Preference number: 1 (lower is better) Translates to: VLLGQQIHETQWRGR*CLHTEPGHPGTRET Trigger: CGTTTCCCTGGTGCCCGGGTGCCCTGGCTCAGTGTGCAGACAGCAGCGCCCTCTCCACTGCGTCTCATGGATCTGCTGTCCAAGAAGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CCA 90 bp | GAGCCGTGCACTGCACGGCTGGGCCCGGTAGCGCTGCAGCAAGGCTaGCTCTACTGCTCTCAGCACGTGCAAGTTGGAGAAGCGCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: EPCTARLGPVALQQG*LYCSQHVQVGEAQK Trigger: TTTCTGCGCTTCTCCAACTTGCACGTGCTGAGAGCAGTAGAGCCAGCCTTGCTGCAGCGCTACCGGGCCCAGCCGTGCAGTGCACGGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR TCA 90 bp | CCAGCTGTTGCTTCTGGAGCTGCAGCGCTGGCTGGTAACGGCGGTTaGGCTCCTCTAAGGCTGTCCCCAGGACGTCAGCCACATCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: PAVASGAAALAGNGG*APLRLSPGRQPHQP Trigger: AGGCTGATGTGGCTGACGTCCTGGGGACAGCCTTAGAGGAGCTCAACCGCCGTTACCAGCCAGCGCTGCAGCTCCAGAAGCAACAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR GCA 90 bp | GCACTGACGATGTCGTTGCGGCAGCTTTCCAGGTGGGGGCGCAGTTaGTGTAGCAGTGTGCGAGAGAGCAAGACTCCAAAGCCCCCGTGG | + |
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Preference number: 1 (lower is better) Translates to: ALTMSLRQLSRWGRS*CSSVRESKTPKPPW Trigger: CCACGGGGGCTTTGGAGTCTTGCTCTCTCGCACACTGCTACAGCAACTGCGCCCCCACCTGGAAAGCTGCCGCAACGACATCGTCAGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR GCA 90 bp | CGGTCCAGCTCAGCGCGGGCAAAAGCTTTGTGCAGCTGGTACATGTaGACAGGGTCACGCACGGGATGGGCTGTCAAGGCGCTGCGGAAA | + |
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Preference number: 1 (lower is better) Translates to: RSSSARAKALCSWYM*TGSRTGWAVKALRK Trigger: TTTCCGCAGCGCCTTGACAGCCCATCCCGTGCGTGACCCTGTGCACATGTACCAGCTGCACAAAGCTTTTGCCCGCGCTGAGCTGGACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CCA 90 bp | TGGTACGTGCGGTCCAGCTCAGCGCGGGCAAAAGCTTTGTGCAGCTaGTACATGTGCACAGGGTCACGCACGGGATGGGCTGTCAAGGCG | + |
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Preference number: 1 (lower is better) Translates to: WYVRSSSARAKALCS*YMCTGSRTGWAVKA Trigger: CGCCTTGACAGCCCATCCCGTGCGTGACCCTGTGCACATGTACCAGCTGCACAAAGCTTTTGCCCGCGCTGAGCTGGACCGCACGTACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR GCA 90 bp | ATCTCCTGGTACGTGCGGTCCAGCTCAGCGCGGGCAAAAGCTTTGTaGAGCTGGTACATGTGCACAGGGTCACGCACGGGATGGGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: ISWYVRSSSARAKAL*SWYMCTGSRTGWAV Trigger: GACAGCCCATCCCGTGCGTGACCCTGTGCACATGTACCAGCTGCACAAAGCTTTTGCCCGCGCTGAGCTGGACCGCACGTACCAGGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CCA 90 bp | TGTCCTGAGCCCATGGGTCCAACAAAGCAAGAGACAAGGGACCAGTaGGCTGCCCTAGGGACTGAGGCTACAGCCAGCCCTGTCCAGCGA | + |
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Preference number: 1 (lower is better) Translates to: CPEPMGPTKQETRDQ*AALGTEATASPVQR Trigger: TCGCTGGACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCCCACTGGTCCCTTGTCTCTTGCTTTGTTGGACCCATGGGCTCAGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
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| 3UTR CCA 90 bp | TCATCCGGGCGAGCACTGACGATGTCGTTGCGGCAGCTTTCCAGGTaGGGGCGCAGTTGCTGTAGCAGTGTGCGAGAGAGCAAGACTCCA | + |
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Preference number: 1 (lower is better) Translates to: SSGRALTMSLRQLSR*GRSCCSSVRESKTP Trigger: TGGAGTCTTGCTCTCTCGCACACTGCTACAGCAACTGCGCCCCCACCTGGAAAGCTGCCGCAACGACATCGTCAGTGCTCGCCCGGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CCA 90 bp | AGTTGTAGTGCATTCCCTCGTGGTCACCAGTACAGCCCACGCCTGTaGCATCAAGGATGCAGCGGCCCAACCACTCATCCGGGCGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: SCSAFPRGHQYSPRL*HQGCSGPTTHPGEH Trigger: GTGCTCGCCCGGATGAGTGGTTGGGCCGCTGCATCCTTGATGCCACAGGCGTGGGCTGTACTGGTGACCACGAGGGAATGCACTACAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CCA 90 bp | AAAGCTTTGTGCAGCTGGTACATGTGCACAGGGTCACGCACGGGATaGGCTGTCAAGGCGCTGCGGAAACGAGGGTCCCCCTCCTGCACA | + |
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Preference number: 1 (lower is better) Translates to: KALCSWYMCTGSRTG*AVKALRKRGSPSCT Trigger: TGTGCAGGAGGGGGACCCTCGTTTCCGCAGCGCCTTGACAGCCCATCCCGTGCGTGACCCTGTGCACATGTACCAGCTGCACAAAGCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR GCA 90 bp | ACTGCACGGCTGGGCCCGGTAGCGCTGCAGCAAGGCTGGCTCTACTaGTCTCAGCACGTGCAAGTTGGAGAAGCGCAGAAACAACTCGTA | + |
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Preference number: 1 (lower is better) Translates to: TARLGPVALQQGWLY*SQHVQVGEAQKQLV Trigger: TACGAGTTGTTTCTGCGCTTCTCCAACTTGCACGTGCTGAGAGCAGTAGAGCCAGCCTTGCTGCAGCGCTACCGGGCCCAGCCGTGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CCA 90 bp | CAGAGGCCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTaGACAAGAAAGGATGGCTCTAGGGCATCTGTCTCAGGGCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: QRPQPESAASRGQGD*TRKDGSRASVSGLV Trigger: GACAAGCCCTGAGACAGATGCCCTAGAGCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGGCCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
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| 3UTR CCA 90 bp | AGCGCTGCAGCAAGGCTGGCTCTACTGCTCTCAGCACGTGCAAGTTaGAGAAGCGCAGAAACAACTCGTACACATCCAGGCTCTCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: SAAARLALLLSARAS*RSAETTRTHPGSPA Trigger: TGCTGGAGAGCCTGGATGTGTACGAGTTGTTTCTGCGCTTCTCCAACTTGCACGTGCTGAGAGCAGTAGAGCCAGCCTTGCTGCAGCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR GCA 90 bp | TGGTATTCTGGATCTCCCACTGCAATTCTTGAATCTCCTGGTACGTaGGGTCCAGCTCAGCGCGGGCAAAAGCTTTGTGCAGCTGGTACA | + |
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Preference number: 1 (lower is better) Translates to: WYSGSPTAILESPGT*GPAQRGQKLCAAGT Trigger: TGTACCAGCTGCACAAAGCTTTTGCCCGCGCTGAGCTGGACCGCACGTACCAGGAGATTCAAGAATTGCAGTGGGAGATCCAGAATACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CAA 90 bp | ACCCGGGCACCAGGGAAACGCCGCTCTAGCTCTGCCACGTGGGCCTaGACAGGTGCGAAGACGTCTGAGTGGGCTGCCCGCTGGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TRAPGKRRSSSATWA*TGAKTSEWAARWAW Trigger: CCAGGCCCAGCGGGCAGCCCACTCAGACGTCTTCGCACCTGTCAAGGCCCACGTGGCAGAGCTAGAGCGGCGTTTCCCTGGTGCCCGGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGGCTGCCCGCTGGGCCTGGCGTGGCTCATACAGCAGCAGCAGGGTCAAGGCCATCCGGGCGAGCACTaGCGATGTCGTTGCGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VGCPLGLAWLIQQQQGQGHPGEH*RCRCGS Trigger: GCTGCCGCAACGACATCGTCAGTGCTCGCCCGGATG...GCCTTGACCCTGCTGCTGCTGTATGAGCCACGCCAGGCCCAGCGGGCAGCCCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCTACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGGCTGCCCTAGGGACTaGGGCTACAGCCAGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: RLQPALSSEAGTWLQVPGGCPRD*GYSQPC Trigger: ACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCC...CCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTAGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGAGAGGGCGCTGCTGTCTGCACACTGAGCCAGGGCACCCGGGCACCAGGCGGCAGCTTTCCAGGTaGGGGCGCAGTTGCTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: QWRGRCCLHTEPGHPGTRRQLSR*GRSCCS Trigger: GCTACAGCAACTGCGCCCCCACCTGGAAAGCTGCCG...CCTGGTGCCCGGGTGCCCTGGCTCAGTGTGCAGACAGCAGCGCCCTCTCCACTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGGCACCCGGGCACCAGGGAAACGCCGCTCTAGCTCTGCCACGTGGGCCTTGACAGAGGCCACAGCCTaGATCAGCAGCGTCAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: QGTRAPGKRRSSSATWALTEATA*ISSVKG Trigger: CCCCTTGACGCTGCTGATTCAGGCTGTGGCCTCTGT...CAAGGCCCACGTGGCAGAGCTAGAGCGGCGTTTCCCTGGTGCCCGGGTGCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGCCTGGCGATCAAAGTGACCGGTGTCACGGCCCAGCTCTGGTGGCCCAGAGGTGGGGGCGCAGTTaGTGTAGCAGTGTGCGAGAG | + |
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Preference number: 2 (lower is better) Translates to: WQPGDQSDRCHGPALVAQRWGRS*CSSVRE Trigger: CTCTCGCACACTGCTACAGCAACTGCGCCCCCACCT...CTGGGCCACCAGAGCTGGGCCGTGACACCGGTCACTTTGATCGCCAGGCTGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CAA 90 bp | ATGCAGCGGCCCAACCACTCATCCGGGCGAGCACTGACGATGTCGTaGCGGCAGCTTTCCAGGTGGGGGCGCAGTTGCTGTAGCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: MQRPNHSSGRALTMS*RQLSRWGRSCCSSV Trigger: CACACTGCTACAGCAACTGCGCCCCCACCTGGAAAGCTGCCGCAACGACATCGTCAGTGCTCGCCCGGATGAGTGGTTGGGCCGCTGCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCCCTCGTGGTCACCAGTACAGCCCACGCCTGTGGCATCAAGGATGCAGCGGGCTGCCCTAGGGACTaGGGCTACAGCCAGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: HSLVVTSTAHACGIKDAAGCPRD*GYSQPC Trigger: ACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCC...CGCTGCATCCTTGATGCCACAGGCGTGGGCTGTACTGGTGACCACGAGGGAATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGACAGCAGATCCATGAGACGCAGTGGAGAGGGCGCTGCTGTCTGCACACTGGCTGCCCGCTGGGCCTaGCGTGGCTCATACAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LDSRSMRRSGEGAAVCTLAARWA*RGSYSS Trigger: GCTGCTGTATGAGCCACGCCAGGCCCAGCGGGCAGC...CAGTGTGCAGACAGCAGCGCCCTCTCCACTGCGTCTCATGGATCTGCTGTCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGACAGCAGATCCATGAGACGCAGTGGAGAGGGCGCTGCTGTCTGCACACTGGCGAAGACGTCTGAGTaGGCTGCCCGCTGGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LDSRSMRRSGEGAAVCTLAKTSE*AARWAW Trigger: CCAGGCCCAGCGGGCAGCCCACTCAGACGTCTTCGC...CAGTGTGCAGACAGCAGCGCCCTCTCCACTGCGTCTCATGGATCTGCTGTCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR CAA 90 bp | GTGTCTGGCCCGGCCAGCAGGAACAGAGTGTCTAGTGGGTGCTTCTaGGACAGCAGATCCATGAGACGCAGTGGAGAGGGCGCTGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: VSGPASRNRVSSGCF*DSRSMRRSGEGAAV Trigger: GACAGCAGCGCCCTCTCCACTGCGTCTCATGGATCTGCTGTCCAAGAAGCACCCACTAGACACTCTGTTCCTGCTGGCCGGGCCAGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGAGGCAAGGCTGGCGTCAGGCATAAACAGAGGCCACAGCCTGAATCAGGAGACAAGGGACCAGTaGGCTGCCCTAGGGACTGAG | + |
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Preference number: 2 (lower is better) Translates to: AQEARLASGINRGHSLNQETRDQ*AALGTE Trigger: CTCAGTCCCTAGGGCAGCCCACTGGTCCCTTGTCTC...CTGATTCAGGCTGTGGCCTCTGTTTATGCCTGACGCCAGCCTTGCCTCCTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAGGCTGCCCTAGGGACTaGGGCTACAGCCAGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PSFLSFTSSNNPSTAQLPGCPRD*GYSQPC Trigger: ACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCC...TGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCAAGGCTGGCTCTACTGCTCTCAGCACGTGCAAGTTGGAGAAGCGCAGAAAGGGCTGTCAAGGCGCTaGGGAAACGAGGGTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: QQGWLYCSQHVQVGEAQKGLSRR*GNEGPP Trigger: AGGGGGACCCTCGTTTCCGCAGCGCCTTGACAGCCC...TTTCTGCGCTTCTCCAACTTGCACGTGCTGAGAGCAGTAGAGCCAGCCTTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAGGCTGGCTCTACTGCTCTCAGCACGTGCAAGTTGGAGAAGCGCAGAAACCGCTGGGCCTGGCGTaGCTCATACAGCAGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: QQGWLYCSQHVQVGEAQKPLGLA*LIQQQQ Trigger: CTGCTGCTGCTGTATGAGCCACGCCAGGCCCAGCGG...TTTCTGCGCTTCTCCAACTTGCACGTGCTGAGAGCAGTAGAGCCAGCCTTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAATCTCAGGGCTTGTCCTaGGCCCATGGGTCCAACAAA | + |
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Preference number: 2 (lower is better) Translates to: RGHSLNQQRQGGRGTGQESQGLS*AHGSNK Trigger: TTTGTTGGACCCATGGGCTCAGGACAAGCCCTGAGA...TTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGGCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGACAGCAGATCCATGAGACGCAGTGGAGAGGGCGCTGCTGTCTGCACACTGGTGGCAGTAGCGGCCTaGGGTAGTATCTCCACCGAT | + |
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Preference number: 2 (lower is better) Translates to: LDSRSMRRSGEGAAVCTLVAVAA*GSISTD Trigger: ATCGGTGGAGATACTACCCCAGGCCGCTACTGCCAC...CAGTGTGCAGACAGCAGCGCCCTCTCCACTGCGTCTCATGGATCTGCTGTCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGTTGGAGAAGCGCAGAAACAACTCGTACACATCCAGGCTCTCCAGCAGCTCGAATCTCCTGGTACGTaGGGTCCAGCTCAGCGCGGG | + |
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Preference number: 2 (lower is better) Translates to: QVGEAQKQLVHIQALQQLESPGT*GPAQRG Trigger: CCCGCGCTGAGCTGGACCGCACGTACCAGGAGATTC...GAGCTGCTGGAGAGCCTGGATGTGTACGAGTTGTTTCTGCGCTTCTCCAACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGCAGGGGCTTAGGTGCTGTTCCCCTGTTCCTGCTCAAAGAGCAGCATGGGTTCCAGGGCTGCAGTaGCAAAGGCTTCTAAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: QVQGLRCCSPVPAQRAAWVPGLQ*QRLLRS Trigger: GCTTCTTAGAAGCCTTTGCCACTGCAGCCCTGGAAC...CCATGCTGCTCTTTGAGCAGGAACAGGGGAACAGCACCTAAGCCCCTGCACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCTCTCTCCCCATCAGCAGCCAGTCGGCTGGTATTCTGGATCTCCCACTGGTTGCTGTAGCAGTGTaGGAGAGAGCAAGACTCCAA | + |
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Preference number: 2 (lower is better) Translates to: RGSLPISSQSAGILDLPLVAVAV*ERARLQ Trigger: TTGGAGTCTTGCTCTCTCGCACACTGCTACAGCAAC...CAGTGGGAGATCCAGAATACCAGCCGACTGGCTGCTGATGGGGAGAGAGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCATCAGCAGCCAGTCGGCTGGTATTCTGGATCTCCCACTGCAATTCTTGAATGCAGCTGGTACATGTaGACAGGGTCACGCACGGGA | + |
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Preference number: 2 (lower is better) Translates to: PHQQPVGWYSGSPTAILECSWYM*TGSRTG Trigger: TCCCGTGCGTGACCCTGTGCACATGTACCAGCTGCA...TTCAAGAATTGCAGTGGGAGATCCAGAATACCAGCCGACTGGCTGCTGATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR CCA 90 bp | GGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGCTTCACGAGACAAGGGACCAGTaGGCTGCCCTAGGGACTGAG | + |
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Preference number: 2 (lower is better) Translates to: GSRREKAVDNVPLLSQLHETRDQ*AALGTE Trigger: CTCAGTCCCTAGGGCAGCCCACTGGTCCCTTGTCTC...GTGAAGCTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAGGCTGGCTCTACTGCTCTCAGCACGTGCAAGTTGGAGAAGCGCAGAAATCCCACTGCAATTCTTaGATCTCCTGGTACGTGCGG | + |
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Preference number: 2 (lower is better) Translates to: QQGWLYCSQHVQVGEAQKSHCNS*ISWYVR Trigger: CCGCACGTACCAGGAGATTCAAGAATTGCAGTGGGA...TTTCTGCGCTTCTCCAACTTGCACGTGCTGAGAGCAGTAGAGCCAGCCTTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
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| 3UTR-3UTR GCA 90 bp | ACGTGCAAGTTGGAGAAGCGCAGAAACAACTCGTACACATCCAGGCTCTCCAGCCGGGCAAAAGCTTTGTaGAGCTGGTACATGTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: TCKLEKRRNNSYTSRLSSRAKAL*SWYMCT Trigger: TGTGCACATGTACCAGCTGCACAAAGCTTTTGCCCG...GCTGGAGAGCCTGGATGTGTACGAGTTGTTTCTGCGCTTCTCCAACTTGCACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAGGACACTTGTCCTGAGCCCATaGGTCCAACAAAGCAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSQLHLLQQSIYSPAPRTLVLSP*VQQSKR Trigger: TCTCTTGCTTTGTTGGACCCATGGGCTCAGGACAAG...TGTCCTGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGCACAGAGGCCACAGCCTaGATCAGCAGCGTCAAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LNQFIKARALSWIQKGEGTEATA*ISSVKG Trigger: CCCCTTGACGCTGCTGATTCAGGCTGTGGCCTCTGT...GCCTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGTTGGAGAAGCGCAGAAACAACTCGTACACATCCAGGCTCTCCAGCAGCTCAAAGCTTTGTGCAGCTaGTACATGTGCACAGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: QVGEAQKQLVHIQALQQLKALCS*YMCTGS Trigger: TGACCCTGTGCACATGTACCAGCTGCACAAAGCTTT...GAGCTGCTGGAGAGCCTGGATGTGTACGAGTTGTTTCTGCGCTTCTCCAACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR-3UTR CCA 90 bp | CACTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGAGGGGGCAGGGGGACTaGACAAGAAAGGATGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: HLTSLLKPELYRGSRREKRGQGD*TRKDGS Trigger: AGAGCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCT...CTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
||
| 3UTR-3UTR TCA 90 bp | CACTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGTCTCAGGGCTTGTCCTaGGCCCATGGGTCCAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: HLTSLLKPELYRGSRREKSQGLS*AHGSNK Trigger: TTTGTTGGACCCATGGGCTCAGGACAAGCCCTGAGA...CTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
||
| 3UTR-3UTR CCA 90 bp | CACTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGCTTGTCCTGAGCCCATaGGTCCAACAAAGCAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: HLTSLLKPELYRGSRREKLVLSP*VQQSKR Trigger: TCTCTTGCTTTGTTGGACCCATGGGCTCAGGACAAG...CTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
||
| 3UTR GCA 72 bp | GCACAGGGTCACGCACGGGATGGGCTGTCAAGGCGCTaGGGAAACGAGGGTCCCCCTCCTGCACAGGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: AQGHARDGLSRR*GNEGPPPAQAP Trigger: GGGAGCCTGTGCAGGAGGGGGACCCTCGTTTCCGCAGCGCCTTGACAGCCCATCCCGTGCGTGACCCTGTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR TCA 72 bp | GGATGCAGCGGCCCAACCACTCATCCGGGCGAGCACTaGCGATGTCGTTGCGGCAGCTTTCCAGGTGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GCSGPTTHPGEH*RCRCGSFPGGG Trigger: GCCCCCACCTGGAAAGCTGCCGCAACGACATCGTCAGTGCTCGCCCGGATGAGTGGTTGGGCCGCTGCATCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR GCA 72 bp | GGACAGCAGATCCATGAGACGCAGTGGAGAGGGCGCTaGTGTCTGCACACTGAGCCAGGGCACCCGGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: GQQIHETQWRGR*CLHTEPGHPGT Trigger: GGTGCCCGGGTGCCCTGGCTCAGTGTGCAGACAGCAGCGCCCTCTCCACTGCGTCTCATGGATCTGCTGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR CCA 72 bp | GGTGCGAAGACGTCTGAGTGGGCTGCCCGCTGGGCCTaGCGTGGCTCATACAGCAGCAGCAGGGTCAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GAKTSEWAARWA*RGSYSSSRVKA Trigger: AGCCTTGACCCTGCTGCTGCTGTATGAGCCACGCCAGGCCCAGCGGGCAGCCCACTCAGACGTCTTCGCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCACTGAGCCGTGCACTGCACGGCTGGGCCCGGTAGCGCTGCAGCAAGGCTGGGCACTGACGATGTCGTaGCGGCAGCTTTCCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FTEPCTARLGPVALQQGWALTMS*RQLSRW Trigger: CCACCTGGAAAGCTGCCGCAACGACATCGTCAGTGC...CCAGCCTTGCTGCAGCGCTACCGGGCCCAGCCGTGCAGTGCACGGCTCAGTGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR TCA 72 bp | CAGGGAAACGCCGCTCTAGCTCTGCCACGTGGGCCTTaGCAGGTGCGAAGACGTCTGAGTGGGCTGCCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: QGNAALALPRGP*QVRRRLSGLPA Trigger: AGCGGGCAGCCCACTCAGACGTCTTCGCACCTGTCAAGGCCCACGTGGCAGAGCTAGAGCGGCGTTTCCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR CCA 72 bp | TGCAGCTGGTACATGTGCACAGGGTCACGCACGGGATaGGCTGTCAAGGCGCTGCGGAAACGAGGGTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: CSWYMCTGSRTG*AVKALRKRGSP Trigger: GGGGGACCCTCGTTTCCGCAGCGCCTTGACAGCCCATCCCGTGCGTGACCCTGTGCACATGTACCAGCTGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR CCA 72 bp | CGGGCACCAGGGAAACGCCGCTCTAGCTCTGCCACGTaGGCCTTGACAGGTGCGAAGACGTCTGAGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RAPGKRRSSSAT*ALTGAKTSEWA Trigger: AGCCCACTCAGACGTCTTCGCACCTGTCAAGGCCCACGTGGCAGAGCTAGAGCGGCGTTTCCCTGGTGCCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR TCA 72 bp | GCTTCTGGAGCTGCAGCGCTGGCTGGTAACGGCGGTTaGGCTCCTCTAAGGCTGTCCCCAGGACGTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ASGAAALAGNGG*APLRLSPGRQP Trigger: TGGCTGACGTCCTGGGGACAGCCTTAGAGGAGCTCAACCGCCGTTACCAGCCAGCGCTGCAGCTCCAGAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR CCA 72 bp | GAGCAAGACTCCAAAGCCCCCGTGGCAGTAGCGGCCTaGGGTAGTATCTCCACCGATGAAGTCCTGCGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: EQDSKAPVAVAA*GSISTDEVLRP Trigger: CGGCCGCAGGACTTCATCGGTGGAGATACTACCCCAGGCCGCTACTGCCACGGGGGCTTTGGAGTCTTGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR CCA 72 bp | CGAGCACTGACGATGTCGTTGCGGCAGCTTTCCAGGTaGGGGCGCAGTTGCTGTAGCAGTGTGCGAGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RALTMSLRQLSR*GRSCCSSVRES Trigger: GCTCTCTCGCACACTGCTACAGCAACTGCGCCCCCACCTGGAAAGCTGCCGCAACGACATCGTCAGTGCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR CCA 72 bp | CGGTCCAGCTCAGCGCGGGCAAAAGCTTTGTGCAGCTaGTACATGTGCACAGGGTCACGCACGGGATGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RSSSARAKALCS*YMCTGSRTGWA Trigger: AGCCCATCCCGTGCGTGACCCTGTGCACATGTACCAGCTGCACAAAGCTTTTGCCCGCGCTGAGCTGGACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR CCA 72 bp | ACTGCACGGCTGGGCCCGGTAGCGCTGCAGCAAGGCTaGCTCTACTGCTCTCAGCACGTGCAAGTTGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TARLGPVALQQG*LYCSQHVQVGE Trigger: TTCTCCAACTTGCACGTGCTGAGAGCAGTAGAGCCAGCCTTGCTGCAGCGCTACCGGGCCCAGCCGTGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTGCTTCTTGGACAGCAGATCCATGAGACGCAGTGGAGAGGGCGCTGCTGTGCCGTTCACCAGCTGTaGCTTCTGGAGCTGCAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: WVLLGQQIHETQWRGRCCAVHQL*LLELQR Trigger: GCGCTGCAGCTCCAGAAGCAACAGCTGGTGAACGGC...ACAGCAGCGCCCTCTCCACTGCGTCTCATGGATCTGCTGTCCAAGAAGCACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR TCA 72 bp | TGGCATGCATGCGGCAGCGGTTCAGGAAATCAGGTGTaGGTACCGTGTCTGGCCCGGCCAGCAGGAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: WHACGSGSGNQV*VPCLARPAGTE Trigger: CTCTGTTCCTGCTGGCCGGGCCAGACACGGTACTCACACCTGATTTCCTGAACCGCTGCCGCATGCATGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR GCA 72 bp | TCAGCGCGGGCAAAAGCTTTGTGCAGCTGGTACATGTaGACAGGGTCACGCACGGGATGGGCTGTCAAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: SARAKALCSWYM*TGSRTGWAVKA Trigger: CGCCTTGACAGCCCATCCCGTGCGTGACCCTGTGCACATGTACCAGCTGCACAAAGCTTTTGCCCGCGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR GCA 72 bp | TACGTGCGGTCCAGCTCAGCGCGGGCAAAAGCTTTGTaGAGCTGGTACATGTGCACAGGGTCACGCACGGGA | + |
|
Preference number: 3 (lower is better) Translates to: YVRSSSARAKAL*SWYMCTGSRTG Trigger: TCCCGTGCGTGACCCTGTGCACATGTACCAGCTGCACAAAGCTTTTGCCCGCGCTGAGCTGGACCGCACGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR GCA 72 bp | CTGGCGTGGCTCATACAGCAGCAGCAGGGTCAAGGCTaGTGCATCACCAGGTTCCAGGGCTGCAGTGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LAWLIQQQQGQG*CITRFQGCSGK Trigger: TTTGCCACTGCAGCCCTGGAACCTGGTGATGCAGCAGCCTTGACCCTGCTGCTGCTGTATGAGCCACGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR GCA 72 bp | CTGGGCCCGGTAGCGCTGCAGCAAGGCTGGCTCTACTaGTCTCAGCACGTGCAAGTTGGAGAAGCGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGPVALQQGWLY*SQHVQVGEAQK Trigger: TTTCTGCGCTTCTCCAACTTGCACGTGCTGAGAGCAGTAGAGCCAGCCTTGCTGCAGCGCTACCGGGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR TCA 72 bp | GAGTGTCTAGTGGGTGCTTCTTGGACAGCAGATCCATaGGACGCAGTGGAGAGGGCGCTGCTGTCTGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: ECLVGASWTADP*DAVERALLSAH Trigger: GTGTGCAGACAGCAGCGCCCTCTCCACTGCGTCTCATGGATCTGCTGTCCAAGAAGCACCCACTAGACACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR GCA 72 bp | ATGTCGTTGCGGCAGCTTTCCAGGTGGGGGCGCAGTTaGTGTAGCAGTGTGCGAGAGAGCAAGACTCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: MSLRQLSRWGRS*CSSVRESKTPK Trigger: CTTTGGAGTCTTGCTCTCTCGCACACTGCTACAGCAACTGCGCCCCCACCTGGAAAGCTGCCGCAACGACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR GCA 72 bp | TCAGCGCTTCCAGCTGCAGGTCTAGTGTGTACTCCATaGCTCGGGCTGGATCAAAACGCCGGTAGCCGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SALPAAGLVCTP*LGLDQNAGSRS Trigger: TGAACGGCTACCGGCGTTTTGATCCAGCCCGAGGCATGGAGTACACACTAGACCTGCAGCTGGAAGCGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR CCA 72 bp | CAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTaGACAAGAAAGGATGGCTCTAGGGCATCTGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QPESAASRGQGD*TRKDGSRASVS Trigger: TGAGACAGATGCCCTAGAGCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
||
| 3UTR TCA 72 bp | AGGATGGCTCTAGGGCATCTGTCTCAGGGCTTGTCCTaGGCCCATGGGTCCAACAAAGCAAGAGACAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RMALGHLSQGLS*AHGSNKARDKG Trigger: TCCCTTGTCTCTTGCTTTGTTGGACCCATGGGCTCAGGACAAGCCCTGAGACAGATGCCCTAGAGCCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 ENSMUST00000138683.2 |
||
| 3UTR GCA 72 bp | GGATCTCCCACTGCAATTCTTGAATCTCCTGGTACGTaGGGTCCAGCTCAGCGCGGGCAAAAGCTTTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GSPTAILESPGT*GPAQRGQKLCA Trigger: TGCACAAAGCTTTTGCCCGCGCTGAGCTGGACCGCACGTACCAGGAGATTCAAGAATTGCAGTGGGAGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR GCA 72 bp | CGCTGCAGCAAGGCTGGCTCTACTGCTCTCAGCACGTaGAAGTTGGAGAAGCGCAGAAACAACTCGTACACA | + |
|
Preference number: 3 (lower is better) Translates to: RCSKAGSTALST*KLEKRRNNSYT Trigger: TGTGTACGAGTTGTTTCTGCGCTTCTCCAACTTGCACGTGCTGAGAGCAGTAGAGCCAGCCTTGCTGCAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| 3UTR CCA 72 bp | GCAAGGCTGGCTCTACTGCTCTCAGCACGTGCAAGTTaGAGAAGCGCAGAAACAACTCGTACACATCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ARLALLLSARAS*RSAETTRTHPG Trigger: GCCTGGATGTGTACGAGTTGTTTCTGCGCTTCTCCAACTTGCACGTGCTGAGAGCAGTAGAGCCAGCCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTCACGCACGGGATGGGCTGTCAAGGCGCTGCGGAAACGAGGGTCCCCCTCGCGCCGCGTTGGTGTTaGCGCGCGGCGGCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVTHGMGCQGAAETRVPLAPRWC*RAAAAQ Trigger: CTGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGC...GAGGGGGACCCTCGTTTCCGCAGCGCCTTGACAGCCCATCCCGTGCGTGACCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGTCACGGCCCAGCTCTaGTGGCCCAGGGCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLQPALSSEAGTWLQVPGVTAQL*WPRALR Trigger: CCTCAGGGCCCTGGGCCACCAGAGCTGGGCCGTGAC...CCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTAGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR TCA 90 bp | ACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGACACCACCGCCATGCCTaGAGGTGTCCGGCGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TASPVQRGWHVAPGSWGRHHRHA*RCPAAP Trigger: AGGGGCCGCCGGACACCTTCAGGCATGGCGGTGGTG...TCTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
||
| CDS-3UTR CCA 90 bp | AGGCTACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGAGGGCGAGACGGTGCTaGGATGCCCACTGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLQPALSSEAGTWLQVPGRARRC*DAHWPG Trigger: GCCTGGCCAGTGGGCATCCCAGCACCGTCTCGCCCT...CCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTAGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR TCA 90 bp | AGGGACCAGTGGGCTGCCCTAGGGACTGAGGCTACAGCCAGCCCTGTCCAGCGACTGCTGTCTGCACACTaGGCCAGGGCACCCGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RDQWAALGTEATASPVQRLLSAH*ARAPGH Trigger: GTGCCCGGGTGCCCTGGCTCAGTGTGCAGACAGCAG...TCGCTGGACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCCCACTGGTCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | AGGCTACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGGGCTGTCAAGGCGCTaGGGAAACGAGGGTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLQPALSSEAGTWLQVPGGLSRR*GNEGPP Trigger: AGGGGGACCCTCGTTTCCGCAGCGCCTTGACAGCCC...CCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTAGCCT 68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | AGGCTACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAGACGGTGCTGGGATaGCCACTGGCCAGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLQPALSSEAGTWLQVPGETVLG*PLARQR Trigger: CCTCTGCCTGGCCAGTGGGCATCCCAGCACCGTCTC...CCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTAGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | TACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGGGCAGGGCGAGACGGTaGTGGGATGCCCACTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSQPCPARLARGSRFLGKGRARR*WDAHWP Trigger: TGGCCAGTGGGCATCCCAGCACCGTCTCGCCCTGCC...CTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | AGGGACCAGTGGGCTGCCCTAGGGACTGAGGCTACAGCCAGCCCTGTCCAGCGAGAGTGGGCTGCCCGCTaGGCCTGGCGTGGCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: RDQWAALGTEATASPVQREWAAR*AWRGSY Trigger: GTATGAGCCACGCCAGGCCCAGCGGGCAGCCCACTC...TCGCTGGACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCCCACTGGTCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | TACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGGCGAAGACGTCTGAGTaGGCTGCCCGCTGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSQPCPARLARGSRFLGKAKTSE*AARWAW Trigger: CCAGGCCCAGCGGGCAGCCCACTCAGACGTCTTCGC...CTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | AGGCTACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAATCTCCTGGTACGTaGGGTCCAGCTCAGCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLQPALSSEAGTWLQVPGESPGT*GPAQRG Trigger: CCCGCGCTGAGCTGGACCGCACGTACCAGGAGATTC...CCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTAGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | TACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGGAGGGCGCTGCTGTCTaGACACTGAGCCAGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: YSQPCPARLARGSRFLGKEGAAV*TLSQGT Trigger: GGTGCCCTGGCTCAGTGTGCAGACAGCAGCGCCCTC...CTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | AGGGACCAGTGGGCTGCCCTAGGGACTGAGGCTACAGCCAGCCCTGTCCAGCGACCGCTGGGCCTGGCGTaGCTCATACAGCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDQWAALGTEATASPVQRPLGLA*LIQQQQ Trigger: CTGCTGCTGCTGTATGAGCCACGCCAGGCCCAGCGG...TCGCTGGACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCCCACTGGTCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | TACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGCCCAGGGCCCTGAGGTaGAGCCACAGCAGGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YSQPCPARLARGSRFLGKPRALR*SHSRVE Trigger: TTCCACCCTGCTGTGGCTCCACCTCAGGGCCCTGGG...CTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| 3UTR CAA 72 bp | CCAGGGAAACGCCGCTCTAGCTCTGCCACGTGGGCCTaGACAGGTGCGAAGACGTCTGAGTGGGCTGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PGKRRSSSATWA*TGAKTSEWAAR Trigger: GCGGGCAGCCCACTCAGACGTCTTCGCACCTGTCAAGGCCCACGTGGCAGAGCTAGAGCGGCGTTTCCCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| CDS-3UTR CCA 90 bp | GGCCACCCTGGGGTGTCAGCGCTTCCAGCTGCAGGTCTAGTGTGTACTCCATGCTCAGAGTCTCCGGGTTaGGGCGGCCCGGGTCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GHPGVSALPAAGLVCTPCSESPG*GGPGPQ Trigger: TTGCGGACCCGGGCCGCCCCAACCCGGAGACTCTGA...GCATGGAGTACACACTAGACCTGCAGCTGGAAGCGCTGACACCCCAGGGTGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| CDS-3UTR CCA 90 bp | AGGGACCAGTGGGCTGCCCTAGGGACTGAGGCTACAGCCAGCCCTGTCCAGCGACGGCAGCTTTCCAGGTaGGGGCGCAGTTGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDQWAALGTEATASPVQRRQLSR*GRSCCS Trigger: GCTACAGCAACTGCGCCCCCACCTGGAAAGCTGCCG...TCGCTGGACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCCCACTGGTCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | AGGCTACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGTACAGCCCACGCCTGTaGCATCAAGGATGCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLQPALSSEAGTWLQVPGYSPRL*HQGCSG Trigger: GCCGCTGCATCCTTGATGCCACAGGCGTGGGCTGTA...CCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTAGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGAGGCAAGGCTGGCGTCAGGCATAAACAGAGGCCACAGCCTGAATCAGGTCACGGCCCAGCTCTaGTGGCCCAGGGCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQEARLASGINRGHSLNQVTAQL*WPRALR Trigger: CCTCAGGGCCCTGGGCCACCAGAGCTGGGCCGTGAC...CTGATTCAGGCTGTGGCCTCTGTTTATGCCTGACGCCAGCCTTGCCTCCTGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | ACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGAGCCACCAGAAGCTTCTaGCTGATGCCCAGCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TASPVQRGWHVAPGSWGRATRSF*LMPSSV Trigger: CACGGAGCTGGGCATCAGGCAGAAGCTTCTGGTGGC...TCTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAATGGCGCAGCGCCAGGTaGAGGTGTCCGATGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGHSLNQQRQGGRGTGQEWRSAR*RCPMGL Trigger: GAGGCCCATCGGACACCTGCACCTGGCGCTGCGCCA...TTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGGCCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | AGGCTACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGTGCAGCTGGTACATGTaGACAGGGTCACGCACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLQPALSSEAGTWLQVPGCSWYM*TGSRTG Trigger: TCCCGTGCGTGACCCTGTGCACATGTACCAGCTGCA...CCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTAGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | AGGGACCAGTGGGCTGCCCTAGGGACTGAGGCTACAGCCAGCCCTGTCCAGCGACAGGGTCAAGGCTGCTaGATCACCAGGTTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RDQWAALGTEATASPVQRQGQGC*ITRFQG Trigger: GCCCTGGAACCTGGTGATGCAGCAGCCTTGACCCTG...TCGCTGGACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCCCACTGGTCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | TACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGCAGGGTCAAGGCTGCTaGATCACCAGGTTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YSQPCPARLARGSRFLGKQGQGC*ITRFQG Trigger: GCCCTGGAACCTGGTGATGCAGCAGCCTTGACCCTG...CTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | ACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGACAGTGGAGAGGGCGCTaGTGTCTGCACACTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TASPVQRGWHVAPGSWGRQWRGR*CLHTEP Trigger: TGGCTCAGTGTGCAGACAGCAGCGCCCTCTCCACTG...TCTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | AGGCTACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGTGGCAGTAGCGGCCTaGGGTAGTATCTCCACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLQPALSSEAGTWLQVPGVAVAA*GSISTD Trigger: ATCGGTGGAGATACTACCCCAGGCCGCTACTGCCAC...CCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGGCGCGAAGACGTCTGAGTaGGCTGCCCGCTGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPESAASRGQGDWTRKDGAKTSE*AARWAW Trigger: CCAGGCCCAGCGGGCAGCCCACTCAGACGTCTTCGC...GCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | AGGGACCAGTGGGCTGCCCTAGGGACTGAGGCTACAGCCAGCCCTGTCCAGCGATGTGAGTACCGTGTCTaGCCCGGCCAGCAGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RDQWAALGTEATASPVQRCEYRV*PGQQEQ Trigger: CTGTTCCTGCTGGCCGGGCCAGACACGGTACTCACA...TCGCTGGACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCCCACTGGTCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| 3UTR CAA 72 bp | CCCAACCACTCATCCGGGCGAGCACTGACGATGTCGTaGCGGCAGCTTTCCAGGTGGGGGCGCAGTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNHSSGRALTMS*RQLSRWGRSCC Trigger: ACAGCAACTGCGCCCCCACCTGGAAAGCTGCCGCAACGACATCGTCAGTGCTCGCCCGGATGAGTGGTTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGATCAGGAAATCAGGTGTaGGTACCGTGTCTGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TASPVQRGWHVAPGSWGRSGNQV*VPCLAR Trigger: CCGGGCCAGACACGGTACTCACACCTGATTTCCTGA...TCTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | CCCTCCTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAGCGCCGCGTTGGTGTTaGCGCGCGGCGGCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSFLSFTSSNNPSTAQLPAPRWC*RAAAAQ Trigger: CTGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGC...TGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAGGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000138683.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGCAAGGCTGGCGTCAGGCATAAACAGAGGCCACAGCCTGAATCAGCATCAGAGTCTCCGGGTTaGGGCGGCCCGGGTCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGGKAGVRHKQRPQPESASESPG*GGPGPQ Trigger: TTGCGGACCCGGGCCGCCCCAACCCGGAGACTCTGA...TGCTGATTCAGGCTGTGGCCTCTGTTTATGCCTGACGCCAGCCTTGCCTCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000138683.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGCCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAACCGCTGGGCCTGGCGTaGCTCATACAGCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGHSLNQQRQGGRGTGQEPLGLA*LIQQQQ Trigger: CTGCTGCTGCTGTATGAGCCACGCCAGGCCCAGCGG...TTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGGCCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR TCA 90 bp | GACCAGTGGGCTGCCCTAGGGACTGAGGCTACAGCCAGCCCTGTCCAGCGAGGCTCCCACTGCAATTCTTaGATCTCCTGGTACGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DQWAALGTEATASPVQRGSHCNS*ISWYVR Trigger: CCGCACGTACCAGGAGATTCAAGAATTGCAGTGGGA...GCCTCGCTGGACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCCCACTGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR TCA 90 bp | AGAGGCCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAACTGCCACGTGGGCCTTaGCAGGTGCGAAGACGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGHSLNQQRQGGRGTGQELPRGP*QVRRRL Trigger: CAGACGTCTTCGCACCTGTCAAGGCCCACGTGGCAG...TTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGGCCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | CCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGAGGGCGCTGCTGTCTaGACACTGAGCCAGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PQPESAASRGQGDWTRKDEGAAV*TLSQGT Trigger: GGTGCCCTGGCTCAGTGTGCAGACAGCAGCGCCCTC...ATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAGCATGGCAAGCTGGGTaGGGGAGCCAAGGCCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGHSLNQQRQGGRGTGQEAWQAG*GSQGPQ Trigger: TTGAGGGCCTTGGCTCCCGCACCCAGCTTGCCATGC...TTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGGCCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGGCGGTGCAGGTGTCCGATaGGCCTCTCTTCGCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QPESAASRGQGDWTRKDGGAGVR*ASLRPV Trigger: CACTGGGCGAAGAGAGGCCCATCGGACACCTGCACC...GCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CCCCTCCTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAGGGCGAGACGGTGCTaGGATGCCCACTGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLSQLHLLQQSIYSPAPRARRC*DAHWPG Trigger: GCCTGGCCAGTGGGCATCCCAGCACCGTCTCGCCCT...GGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAGGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | GACCAGTGGGCTGCCCTAGGGACTGAGGCTACAGCCAGCCCTGTCCAGCGAGGCGTTCCAGGGCTGCAGTaGCAAAGGCTTCTAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DQWAALGTEATASPVQRGVPGLQ*QRLLRS Trigger: GCTTCTTAGAAGCCTTTGCCACTGCAGCCCTGGAAC...GCCTCGCTGGACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCCCACTGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR TCA 90 bp | CCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATCTGCCACGTGGGCCTTaGCAGGTGCGAAGACGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQPESAASRGQGDWTRKDLPRGP*QVRRRL Trigger: CAGACGTCTTCGCACCTGTCAAGGCCCACGTGGCAG...ATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCGCCTGGCGATCAAAGTaGCCGGTGTCACGGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLSQLHLLQQSIYSPAPAWRSK*PVSRPS Trigger: GCTGGGCCGTGACACCGGTCACTTTGATCGCCAGGC...GGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAGGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | CGTGGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGCTTCGCTCGGATCCGGGCTaGACCGAGTTGGGCCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RGSRREKAVDNVPLLSQLRSDPG*TELGRR Trigger: GCGCCGGCCCAACTCGGTGCAGCCCGGATCCGAGCG...AAGCTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000138683.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCCTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCATGGCGCAGCGCCAGGTaGAGGTGTCCGATGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSFLSFTSSNNPSTAQLPWRSAR*RCPMGL Trigger: GAGGCCCATCGGACACCTGCACCTGGCGCTGCGCCA...TGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGGCAAGTCATCGCCGTGTTaGTCCAGCAGGTGGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPESAASRGQGDWTRKDGKSSPC*SSRWRS Trigger: GCTGCGCCACCTGCTGGAGCAACACGGCGATGACTT...GCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGGCAGGTGGGGGCGCAGTTaGTGTAGCAGTGTGCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPESAASRGQGDWTRKDGRWGRS*CSSVRE Trigger: CTCTCGCACACTGCTACAGCAACTGCGCCCCCACCT...GCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGCAAGGCTGGCGTCAGGCATAAACAGAGGCCACAGCCTGAATCAGCACGGCAGCTTTCCAGGTaGGGGCGCAGTTGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGGKAGVRHKQRPQPESARQLSR*GRSCCS Trigger: GCTACAGCAACTGCGCCCCCACCTGGAAAGCTGCCG...TGCTGATTCAGGCTGTGGCCTCTGTTTATGCCTGACGCCAGCCTTGCCTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CCCTCCTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAGAGTGGGCTGCCCGCTaGGCCTGGCGTGGCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: PSFLSFTSSNNPSTAQLPEWAAR*AWRGSY Trigger: GTATGAGCCACGCCAGGCCCAGCGGGCAGCCCACTC...TGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGGCGCTCAAAGAGCAGCATaGCAAGCTGGGTGCGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPESAASRGQGDWTRKDGAQRAA*QAGCGS Trigger: GCTCCCGCACCCAGCTTGCCATGCTGCTCTTTGAGC...GCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| 3UTR CAA 72 bp | TGGTACGTGCGGTCCAGCTCAGCGCGGGCAAAAGCTTaGTGCAGCTGGTACATGTGCACAGGGTCACGCACG | + |
|
Preference number: 4 (lower is better) Translates to: WYVRSSSARAKA*CSWYMCTGSRT Trigger: CGTGCGTGACCCTGTGCACATGTACCAGCTGCACAAAGCTTTTGCCCGCGCTGAGCTGGACCGCACGTACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| CDS-3UTR TCA 90 bp | CCCTCCTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAGCCTGGCGATCAAAGTaGCCGGTGTCACGGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSFLSFTSSNNPSTAQLPAWRSK*PVSRPS Trigger: GCTGGGCCGTGACACCGGTCACTTTGATCGCCAGGC...TGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | ACTTCAATGCGTGGGCAGAGACATCAATGTGATGAGTACATTCCTCCCTCTCCCCGCTCGGATCCGGGCTaGACCGAGTTGGGCCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TSMRGQRHQCDEYIPPSPRSDPG*TELGRR Trigger: GCGCCGGCCCAACTCGGTGCAGCCCGGATCCGAGCG...GGGAGAGGGAGGAATGTACTCATCACATTGATGTCTCTGCCCACGCATTGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124042.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAATGGAAGGCCTGGAAGTaGATGGGGAAGAAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGHSLNQQRQGGRGTGQEWKAWK*MGKKAC Trigger: GCAGGCCTTCTTCCCCATGCACTTCCAGGCCTTCCA...TTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGGCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAGGACAGGGTCACGCACGGGATaGGCTGTCAAGGCGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQLHLLQQSIYSPAPRTGSRTG*AVKALR Trigger: CCGCAGCGCCTTGACAGCCCATCCCGTGCGTGACCC...TGTCCTGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGCAAGGCTGGCGTCAGGCATAAACAGAGGCCACAGCCTGAATCAGCAACCAGCTGTTGCTTCTaGAGCTGCAGCGCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGKAGVRHKQRPQPESATSCCF*SCSAGW Trigger: CCAGCCAGCGCTGCAGCTCCAGAAGCAACAGCTGGT...TGCTGATTCAGGCTGTGGCCTCTGTTTATGCCTGACGCCAGCCTTGCCTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | GAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGGCTCTAGGTGTGAGTACCGTGTCTaGCCCGGCCAGCAGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ESAASRGQGDWTRKDGSRCEYRV*PGQQEQ Trigger: CTGTTCCTGCTGGCCGGGCCAGACACGGTACTCACA...CCTAGAGCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGCAAGGCTGGCGTCAGGCATAAACAGAGGCCACAGCCTGAATCAGCAGGAGCCACAGCAGGGTaGAAGGCCTGGAAGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PGGKAGVRHKQRPQPESAGATAG*KAWKCM Trigger: CATGCACTTCCAGGCCTTCCACCCTGCTGTGGCTCC...TGCTGATTCAGGCTGTGGCCTCTGTTTATGCCTGACGCCAGCCTTGCCTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGCTCAAAGAGCAGCATaGCAAGCTGGGTGCGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQPESAASRGQGDWTRKDAQRAA*QAGCGS Trigger: GCTCCCGCACCCAGCTTGCCATGCTGCTCTTTGAGC...ATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| 3UTR CAA 72 bp | CCGGCCAGCAGGAACAGAGTGTCTAGTGGGTGCTTCTaGGACAGCAGATCCATGAGACGCAGTGGAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PASRNRVSSGCF*DSRSMRRSGEG Trigger: GCCCTCTCCACTGCGTCTCATGGATCTGCTGTCCAAGAAGCACCCACTAGACACTCTGTTCCTGCTGGCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138683.2 |
||
| CDS-3UTR TCA 90 bp | CGTGGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGCTTAGGTGCGAAGACGTCTaGGTGGGCTGCCCGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGSRREKAVDNVPLLSQLRCEDV*VGCPLG Trigger: GCCCAGCGGGCAGCCCACTCAGACGTCTTCGCACCT...AAGCTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGGCAAGGCTGGCGTCAGGCATAAACAGAGGCCACAGCCTGAATCAGCATCAGGAAATCAGGTGTaGGTACCGTGTCTGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGKAGVRHKQRPQPESASGNQV*VPCLAR Trigger: CCGGGCCAGACACGGTACTCACACCTGATTTCCTGA...TGCTGATTCAGGCTGTGGCCTCTGTTTATGCCTGACGCCAGCCTTGCCTCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | GGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGCTTCACGGCAGGGCGAGACGGTaGTGGGATGCCCACTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRREKAVDNVPLLSQLHGRARR*WDAHWP Trigger: TGGCCAGTGGGCATCCCAGCACCGTCTCGCCCTGCC...GTGAAGCTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | TACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGAGTCGGCTGGTATTCTaGATCTCCCACTGCAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSQPCPARLARGSRFLGKSRLVF*ISHCNS Trigger: AGAATTGCAGTGGGAGATCCAGAATACCAGCCGACT...CTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGAGGCAAGGCTGGCGTCAGGCATAAACAGAGGCCACAGCCTGAATCAGCAGCAGCCAGTCGGCTaGTATTCTGGATCTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AQEARLASGINRGHSLNQQQPVG*YSGSPT Trigger: AGTGGGAGATCCAGAATACCAGCCGACTGGCTGCTG...CTGATTCAGGCTGTGGCCTCTGTTTATGCCTGACGCCAGCCTTGCCTCCTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | GGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGCTTCACGCTGCCCGCTGGGCCTaGCGTGGCTCATACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRREKAVDNVPLLSQLHAARWA*RGSYSS Trigger: GCTGCTGTATGAGCCACGCCAGGCCCAGCGGGCAGC...GTGAAGCTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGCAGGGTGGAAGGCCTaGAAGTGCATGGGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQPESAASRGQGDWTRKDAGWKA*KCMGKK Trigger: CTTCTTCCCCATGCACTTCCAGGCCTTCCACCCTGC...ATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR TCA 90 bp | CGTGGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGCTTCATCCGGGCGAGCACTaGCGATGTCGTTGCGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGSRREKAVDNVPLLSQLHPGEH*RCRCGS Trigger: GCTGCCGCAACGACATCGTCAGTGCTCGCCCGGATG...AAGCTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGGCCTGTTCCCCTGTTCCTaGTCAAAGAGCAGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPESAASRGQGDWTRKDGLFPCS*SKSSMA Trigger: TGCCATGCTGCTCTTTGAGCAGGAACAGGGGAACAG...GCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATCAGCAGCCAGTCGGCTaGTATTCTGGATCTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PQPESAASRGQGDWTRKDQQPVG*YSGSPT Trigger: AGTGGGAGATCCAGAATACCAGCCGACTGGCTGCTG...ATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CGTGGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGCTTCCCAGGGCCCTGAGGTaGAGCCACAGCAGGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGSRREKAVDNVPLLSQLPRALR*SHSRVE Trigger: TTCCACCCTGCTGTGGCTCCACCTCAGGGCCCTGGG...AAGCTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGGCAGAAGCATGCCTCACTaGCAGCCTGGCGATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPESAASRGQGDWTRKDGRSMPH*QPGDQS Trigger: ACTTTGATCGCCAGGCTGCCAGTGAGGCATGCTTCT...GCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR TCA 90 bp | CCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATTCCCACTGCAATTCTTaGATCTCCTGGTACGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PQPESAASRGQGDWTRKDSHCNS*ISWYVR Trigger: CCGCACGTACCAGGAGATTCAAGAATTGCAGTGGGA...ATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | TATCGTGGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGGGGCTGTCAAGGCGCTaGGGAAACGAGGGTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YRGSRREKAVDNVPLLSQGLSRR*GNEGPP Trigger: AGGGGGACCCTCGTTTCCGCAGCGCCTTGACAGCCC...CTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCCACGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | CCCTCCTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCATGCAGCTGGTACATGTaGACAGGGTCACGCACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSFLSFTSSNNPSTAQLPCSWYM*TGSRTG Trigger: TCCCGTGCGTGACCCTGTGCACATGTACCAGCTGCA...TGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAGGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAACGGGCAAAAGCTTTGTaGAGCTGGTACATGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RGHSLNQQRQGGRGTGQERAKAL*SWYMCT Trigger: TGTGCACATGTACCAGCTGCACAAAGCTTTTGCCCG...TTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGGCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | CCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATCTGTTCCCCTGTTCCTaGTCAAAGAGCAGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQPESAASRGQGDWTRKDLFPCS*SKSSMA Trigger: TGCCATGCTGCTCTTTGAGCAGGAACAGGGGAACAG...ATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAGGACATACAGCCCACGCCTGTaGCATCAAGGATGCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSQLHLLQQSIYSPAPRTYSPRL*HQGCSG Trigger: GCCGCTGCATCCTTGATGCCACAGGCGTGGGCTGTA...TGTCCTGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | GAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGGCTCTAGGAGAAGCATGCCTCACTaGCAGCCTGGCGATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESAASRGQGDWTRKDGSRRSMPH*QPGDQS Trigger: ACTTTGATCGCCAGGCTGCCAGTGAGGCATGCTTCT...CCTAGAGCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGGCAAGGCTGGCGTCAGGCATAAACAGAGGCCACAGCCTGAATCAGCAGTTGCTGTAGCAGTGTaGGAGAGAGCAAGACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGGKAGVRHKQRPQPESAVAVAV*ERARLQ Trigger: TTGGAGTCTTGCTCTCTCGCACACTGCTACAGCAAC...TGCTGATTCAGGCTGTGGCCTCTGTTTATGCCTGACGCCAGCCTTGCCTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | CCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGTTGCTGTAGCAGTGTaGGAGAGAGCAAGACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQPESAASRGQGDWTRKDVAVAV*ERARLQ Trigger: TTGGAGTCTTGCTCTCTCGCACACTGCTACAGCAAC...ATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAGGACAGGAGTTGTAGAAGCATaGCTCACTGGCAGCCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSQLHLLQQSIYSPAPRTGVVEA*LTGSLA Trigger: CGCCAGGCTGCCAGTGAGGCATGCTTCTACAACTCC...TGTCCTGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | TATCGTGGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGGGTGCAGGTGTCCGATaGGCCTCTCTTCGCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YRGSRREKAVDNVPLLSQGAGVR*ASLRPV Trigger: CACTGGGCGAAGAGAGGCCCATCGGACACCTGCACC...CTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCCACGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGGCGCGCTTCAGTATAGGTaGCATCAGGCACTAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QPESAASRGQGDWTRKDGALQYR*HQALGK Trigger: TTTTCCTAGTGCCTGATGCCACCTATACTGAAGCGC...GCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGGCAAAGCTTTGTGCAGCTaGTACATGTGCACAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPESAASRGQGDWTRKDGKALCS*YMCTGS Trigger: TGACCCTGTGCACATGTACCAGCTGCACAAAGCTTT...GCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CGTGGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGCTTACCAGCTGTTGCTTCTaGAGCTGCAGCGCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGSRREKAVDNVPLLSQLTSCCF*SCSAGW Trigger: CCAGCCAGCGCTGCAGCTCCAGAAGCAACAGCTGGT...AAGCTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | GGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGCTTCACGGAGCCACAGCAGGGTaGAAGGCCTGGAAGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GSRREKAVDNVPLLSQLHGATAG*KAWKCM Trigger: CATGCACTTCCAGGCCTTCCACCCTGCTGTGGCTCC...GTGAAGCTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR TCA 90 bp | CTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGCCTGCTGTCTGCACACTaGGCCAGGGCACCCGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNQFIKARALSWIQKGEGLLSAH*ARAPGH Trigger: GTGCCCGGGTGCCCTGGCTCAGTGTGCAGACAGCAG...GCCTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | TATCGTGGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGAAGTCATCGCCGTGTTaGTCCAGCAGGTGGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YRGSRREKAVDNVPLLSQKSSPC*SSRWRS Trigger: GCTGCGCCACCTGCTGGAGCAACACGGCGATGACTT...CTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCCACGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | GGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGCTTCACTGGAAGGCCTGGAAGTaGATGGGGAAGAAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRREKAVDNVPLLSQLHWKAWK*MGKKAC Trigger: GCAGGCCTTCTTCCCCATGCACTTCCAGGCCTTCCA...GTGAAGCTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CGTGGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGCTTGTGGCAGTAGCGGCCTaGGGTAGTATCTCCACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGSRREKAVDNVPLLSQLVAVAA*GSISTD Trigger: ATCGGTGGAGATACTACCCCAGGCCGCTACTGCCAC...AAGCTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | GAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGGCTCTAGGAAAGCTTTGTGCAGCTaGTACATGTGCACAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ESAASRGQGDWTRKDGSRKALCS*YMCTGS Trigger: TGACCCTGTGCACATGTACCAGCTGCACAAAGCTTT...CCTAGAGCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGCAAGGCTGGCGTCAGGCATAAACAGAGGCCACAGCCTGAATCAGCAAGTCGGCTGGTATTCTaGATCTCCCACTGCAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGGKAGVRHKQRPQPESASRLVF*ISHCNS Trigger: AGAATTGCAGTGGGAGATCCAGAATACCAGCCGACT...TGCTGATTCAGGCTGTGGCCTCTGTTTATGCCTGACGCCAGCCTTGCCTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGCGCTGCCCGCTGGGCCTaGCGTGGCTCATACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNQFIKARALSWIQKGEGAARWA*RGSYSS Trigger: GCTGCTGTATGAGCCACGCCAGGCCCAGCGGGCAGC...GCCTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | ACAACTGGAATTCACTGTTACTTAGAAGAAATTACTTCAATGCGTGGGCAGAGAGCGCCGCGTTGGTGTTaGCGCGCGGCGGCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTGIHCYLEEITSMRGQRAPRWC*RAAAAQ Trigger: CTGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGC...TCTCTGCCCACGCATTGAAGTAATTTCTTCTAAGTAACAGTGAATTCCAGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124042.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCCTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAAGAGTGTCTAGTGGGTaGTTCTTGGACAGCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PSFLSFTSSNNPSTAQLPRVSSG*FLDSRS Trigger: GGATCTGCTGTCCAAGAAGCACCCACTAGACACTCT...TGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR TCA 90 bp | TTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGCACATCCGGGCGAGCACTaGCGATGTCGTTGCGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTSLLKPELYRGSRREKAHPGEH*RCRCGS Trigger: GCTGCCGCAACGACATCGTCAGTGCTCGCCCGGATG...TGCCTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | TCTACACTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGTGCCACCACCGCCATaGCTGAAGGTGTCCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: STLNQFIKARALSWIQKGVPPPP*LKVSGG Trigger: GCCGCCGGACACCTTCAGGCATGGCGGTGGTGGCAC...TCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAGTGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAGGACACGGGCAAAAGCTTTGTaGAGCTGGTACATGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSQLHLLQQSIYSPAPRTRAKAL*SWYMCT Trigger: TGTGCACATGTACCAGCTGCACAAAGCTTTTGCCCG...TGTCCTGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | CACTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGAGACGGTGCTGGGATaGCCACTGGCCAGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLTSLLKPELYRGSRREKETVLG*PLARQR Trigger: CCTCTGCCTGGCCAGTGGGCATCCCAGCACCGTCTC...CTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CATCAGGCACTTCCTAAGGTAGAAGGTAAGTTGTACAACTGGAATTCACTGTTATCAGAGTCTCCGGGTTaGGGCGGCCCGGGTCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HQALPKVEGKLYNWNSLLSESPG*GGPGPQ Trigger: TTGCGGACCCGGGCCGCCCCAACCCGGAGACTCTGA...TAACAGTGAATTCCAGTTGTACAACTTACCTTCTACCTTAGGAAGTGCCTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124042.2 |
||
| CDS-3UTR CCA 90 bp | TCTACACTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGGGTCACGCACGGGATaGGCTGTCAAGGCGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: STLNQFIKARALSWIQKGGSRTG*AVKALR Trigger: CCGCAGCGCCTTGACAGCCCATCCCGTGCGTGACCC...TCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAGTGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
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| CDS-3UTR CCA 90 bp | TTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGCATCAGCCACATCAGCCTaGTCGGCCCCACGCAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTSLLKPELYRGSRREKASATSA*SAPRNG Trigger: CCCGTTGCGTGGGGCCGACCAGGCTGATGTGGCTGA...TGCCTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS-3UTR CCA 90 bp | CACTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGTCAGCCACATCAGCCTaGTCGGCCCCACGCAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLTSLLKPELYRGSRREKSATSA*SAPRNG Trigger: CCCGTTGCGTGGGGCCGACCAGGCTGATGTGGCTGA...CTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS-3UTR GCA 90 bp | CTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGCAGGTGGGGGCGCAGTTaGTGTAGCAGTGTGCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNQFIKARALSWIQKGEGRWGRS*CSSVRE Trigger: CTCTCGCACACTGCTACAGCAACTGCGCCCCCACCT...GCCTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS-3UTR GCA 90 bp | TTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGCAGAATCTCCTGGTACGTaGGGTCCAGCTCAGCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTSLLKPELYRGSRREKAESPGT*GPAQRG Trigger: CCCGCGCTGAGCTGGACCGCACGTACCAGGAGATTC...TGCCTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS-3UTR GCA 90 bp | TTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGCAGCATGGCAAGCTGGGTaGGGGAGCCAAGGCCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTSLLKPELYRGSRREKAAWQAG*GSQGPQ Trigger: TTGAGGGCCTTGGCTCCCGCACCCAGCTTGCCATGC...TGCCTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS-3UTR CCA 90 bp | CTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAGGACAGCGCTTCAGTATAGGTaGCATCAGGCACTAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSQLHLLQQSIYSPAPRTALQYR*HQALGK Trigger: TTTTCCTAGTGCCTGATGCCACCTATACTGAAGCGC...TGTCCTGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | CTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGCGCAGGGTGGAAGGCCTaGAAGTGCATGGGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNQFIKARALSWIQKGEGAGWKA*KCMGKK Trigger: CTTCTTCCCCATGCACTTCCAGGCCTTCCACCCTGC...GCCTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS-3UTR GCA 90 bp | TCTACACTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGACAGTGGAGAGGGCGCTaGTGTCTGCACACTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: STLNQFIKARALSWIQKGQWRGR*CLHTEP Trigger: TGGCTCAGTGTGCAGACAGCAGCGCCCTCTCCACTG...TCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAGTGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
||
| CDS-3UTR CCA 90 bp | TTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGCATCTAGCTCTGCCACGTaGGCCTTGACAGGTGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSLLKPELYRGSRREKASSSAT*ALTGAK Trigger: CTTCGCACCTGTCAAGGCCCACGTGGCAGAGCTAGA...TGCCTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR GCA 90 bp | CTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGCGTCAGGAACACTACATaGTCCAGTCGGTGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNQFIKARALSWIQKGEGVRNTT*SSRCPR Trigger: TCTGGGACACCGACTGGAGCATGTAGTGTTCCTGAC...GCCTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
||
| CDS-3UTR CCA 90 bp | CTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGCGTTCCAGGGCTGCAGTaGCAAAGGCTTCTAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNQFIKARALSWIQKGEGVPGLQ*QRLLRS Trigger: GCTTCTTAGAAGCCTTTGCCACTGCAGCCCTGGAAC...GCCTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CCA 90 bp | TCTACACTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGATCTAGCTCTGCCACGTaGGCCTTGACAGGTGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: STLNQFIKARALSWIQKGSSSAT*ALTGAK Trigger: CTTCGCACCTGTCAAGGCCCACGTGGCAGAGCTAGA...TCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAGTGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
||
| CDS-3UTR TCA 90 bp | GCACTTCCTAAGGTAGAAGGTAAGTTGTACAACTGGAATTCACTGTTACTTAGATCCCAAGGTGGCCCTTaGAACCCATCTGACGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALPKVEGKLYNWNSLLLRSQGGP*NPSDGL Trigger: AAGGCCGTCAGATGGGTTTCAAGGGCCACCTTGGGA...TCTAAGTAACAGTGAATTCCAGTTGTACAACTTACCTTCTACCTTAGGAAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124042.2 |
||
| CDS-3UTR GCA 90 bp | CTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGGCAGAGTGTCTAGTGGGTaGTTCTTGGACAGCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LNQFIKARALSWIQKGEGRVSSG*FLDSRS Trigger: GGATCTGCTGTCCAAGAAGCACCCACTAGACACTCT...GCCTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| 3UTR CAA 72 bp | AGGTGGCATCAGGCACTTCCTAAGGTAGAAGGTAAGTaGTACAACTGGAATTCACTGTTACTTAGAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RWHQALPKVEGK*YNWNSLLLRRN Trigger: ATTTCTTCTAAGTAACAGTGAATTCCAGTTGTACAACTTACCTTCTACCTTAGGAAGTGCCTGATGCCACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124042.2 |
||
| CDS CCA 90 bp | CGCCGGCCCCGGGCCTCTCGCGCTCGGATCCGGGCTGCACCGAGTTaGGCCGGCGCGCCGCGTTGGTGTTGCCGCGCGGCGGCAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRPRASRARIRAAPS*AGAPRWCCRAAAAQ Trigger: CTGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGCGCCGGCCCAACTCGGTGCAGCCCGGATCCGAGCGCGAGAGGCCCGGGGCCGGCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS CCA 90 bp | CGCGCTCGGATCCGGGCTGCACCGAGTTGGGCCGGCGCGCCGCGTTaGTGTTGCCGCGCGGCGGCAGCTCAGAGTCTCCGGGTTGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RARIRAAPSWAGAPR*CCRAAAAQSLRVGA Trigger: CGCCCCAACCCGGAGACTCTGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGCGCCGGCCCAACTCGGTGCAGCCCGGATCCGAGCGCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS CCA 90 bp | GCCGCGTTGGTGTTGCCGCGCGGCGGCAGCTCAGAGTCTCCGGGTTaGGGCGGCCCGGGTCCGCAAGGCTCCTCCACCCAGGTGACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AALVLPRGGSSESPG*GGPGPQGSSTQVTL Trigger: CAGCGTCACCTGGGTGGAGGAGCCTTGCGGACCCGGGCCGCCCCAACCCGGAGACTCTGAGCTGCCGCCGCGCGGCAACACCAACGCGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS GCA 90 bp | GGGATGGTAGGGCAAGACACGAGGCTCCCAGCTCTCACCGGTGCCTaGGCCGGCCCCGGGCCTCTCGCGCTCGGATCCGGGCTGCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: GMVGQDTRLPALTGA*AGPGPLALGSGLHR Trigger: TCGGTGCAGCCCGGATCCGAGCGCGAGAGGCCCGGGGCCGGCGCAGGCACCGGTGAGAGCTGGGAGCCTCGTGTCTTGCCCTACCATCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS-3UTR CAA 90 bp | AGGCTACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGCTCAGAGTCTCCGGGTaGGGGCGGCCCGGGTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLQPALSSEAGTWLQVPGLRVSG*GRPGSA Trigger: TGCGGACCCGGGCCGCCCCAACCCGGAGACTCTGAG...CCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTAGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000138683.2 |
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| CDS-3UTR CAA 90 bp | TACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGCTCAGAGTCTCCGGGTaGGGGCGGCCCGGGTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: YSQPCPARLARGSRFLGKLRVSG*GRPGSA Trigger: TGCGGACCCGGGCCGCCCCAACCCGGAGACTCTGAG...CTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000138683.2 |
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| CDS GCA 90 bp | GCAGGTGTCCGATGGGCCTCTCTTCGCCCAGTGCCACCACCGCCATaGCTGAAGGTGTCCGGCGGCCCCTCGCACCGGTCAGGAACACTA | + |
|
Preference number: 5 (lower is better) Translates to: AGVRWASLRPVPPPP*LKVSGGPSHRSGTL Trigger: TAGTGTTCCTGACCGGTGCGAGGGGCCGCCGGACACCTTCAGGCATGGCGGTGGTGGCACTGGGCGAAGAGAGGCCCATCGGACACCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
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| CDS TCA 90 bp | GTGTCCGATGGGCCTCTCTTCGCCCAGTGCCACCACCGCCATGCCTaGAGGTGTCCGGCGGCCCCTCGCACCGGTCAGGAACACTACATG | + |
|
Preference number: 5 (lower is better) Translates to: VSDGPLFAQCHHRHA*RCPAAPRTGQEHYM Trigger: CATGTAGTGTTCCTGACCGGTGCGAGGGGCCGCCGGACACCTTCAGGCATGGCGGTGGTGGCACTGGGCGAAGAGAGGCCCATCGGACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
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| CDS GCA 90 bp | TCAAAGTCATCGCCGTGTTGCTCCAGCAGGTGGCGCAGCGCCAGGTaGAGGTGTCCGATGGGCCTCTCTTCGCCCAGTGCCACCACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SKSSPCCSSRWRSAR*RCPMGLSSPSATTA Trigger: GGCGGTGGTGGCACTGGGCGAAGAGAGGCCCATCGGACACCTGCACCTGGCGCTGCGCCACCTGCTGGAGCAACACGGCGATGACTTTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS-3UTR CAA 90 bp | AGGGACCAGTGGGCTGCCCTAGGGACTGAGGCTACAGCCAGCCCTGTCCAGCGAGTTCTGACGGCCTTCTaGGTGGCCTGGCCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RDQWAALGTEATASPVQRVLTAF*VAWPGC Trigger: GCAGCCAGGCCAGGCCACCAAGAAGGCCGTCAGAAC...TCGCTGGACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCCCACTGGTCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
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| CDS-3UTR CAA 90 bp | CCCCTCCTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCCGCGCCGCGTTGGTGTaGCCGCGCGGCGGCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLLSQLHLLQQSIYSPAPRAALV*PRGGSS Trigger: TGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGCG...GGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAGGAGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000138683.2 |
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| CDS-3UTR CAA 90 bp | ACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGAGCCGTTCACCAGCTGTaGCTTCTGGAGCTGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TASPVQRGWHVAPGSWGRAVHQL*LLELQR Trigger: GCGCTGCAGCTCCAGAAGCAACAGCTGGTGAACGGC...TCTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS-3UTR CAA 90 bp | TACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGGCCGTTCACCAGCTGTaGCTTCTGGAGCTGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: YSQPCPARLARGSRFLGKAVHQL*LLELQR Trigger: GCGCTGCAGCTCCAGAAGCAACAGCTGGTGAACGGC...CTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS-3UTR CAA 90 bp | AGGGACCAGTGGGCTGCCCTAGGGACTGAGGCTACAGCCAGCCCTGTCCAGCGAAAAGTCATCGCCGTGTaGCTCCAGCAGGTGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RDQWAALGTEATASPVQRKVIAV*LQQVAQ Trigger: CTGCGCCACCTGCTGGAGCAACACGGCGATGACTTT...TCGCTGGACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCCCACTGGTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS-3UTR CAA 90 bp | AGGGACCAGTGGGCTGCCCTAGGGACTGAGGCTACAGCCAGCCCTGTCCAGCGAGCACTGACGATGTCGTaGCGGCAGCTTTCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RDQWAALGTEATASPVQRALTMS*RQLSRW Trigger: CCACCTGGAAAGCTGCCGCAACGACATCGTCAGTGC...TCGCTGGACAGGGCTGGCTGTAGCCTCAGTCCCTAGGGCAGCCCACTGGTCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS CCA 90 bp | CGTGCTGATATACCGAGTTCTGACGGCCTTCTTGGTGGCCTGGCCTaGCTGCGCGGGATGGTAGGGCAAGACACGAGGCTCCCAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RADIPSSDGLLGGLA*LRGMVGQDTRLPAL Trigger: GAGAGCTGGGAGCCTCGTGTCTTGCCCTACCATCCCGCGCAGCCAGGCCAGGCCACCAAGAAGGCCGTCAGAACTCGGTATATCAGCACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
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| CDS GCA 90 bp | CCTGAAGGTGTCCGGCGGCCCCTCGCACCGGTCAGGAACACTACATaGTCCAGTCGGTGTCCCAGAGTTCGGTTTACAGCCACACCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PEGVRRPLAPVRNTT*SSRCPRVRFTATPS Trigger: ACTGGGTGTGGCTGTAAACCGAACTCTGGGACACCGACTGGAGCATGTAGTGTTCCTGACCGGTGCGAGGGGCCGCCGGACACCTTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
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| CDS-3UTR CAA 90 bp | CAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAAGGATGGCTCTGCCACGTGGGCCTaGACAGGTGCGAAGACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPESAASRGQGDWTRKDGSATWA*TGAKTS Trigger: AGACGTCTTCGCACCTGTCAAGGCCCACGTGGCAGA...GCCATCCTTTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS-3UTR CAA 90 bp | AGAGGCCACAGCCTGAATCAGCAGCGTCAAGGGGGCAGGGGGACTGGACAAGAAGCGCGGGCAAAAGCTTaGTGCAGCTGGTACATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGHSLNQQRQGGRGTGQEARAKA*CSWYMC Trigger: GCACATGTACCAGCTGCACAAAGCTTTTGCCCGCGC...TTCTTGTCCAGTCCCCCTGCCCCCTTGACGCTGCTGATTCAGGCTGTGGCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CAA 90 bp | GCCCAGGAGGCAAGGCTGGCGTCAGGCATAAACAGAGGCCACAGCCTGAATCAGGCGCGGGCAAAAGCTTaGTGCAGCTGGTACATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AQEARLASGINRGHSLNQARAKA*CSWYMC Trigger: GCACATGTACCAGCTGCACAAAGCTTTTGCCCGCGC...CTGATTCAGGCTGTGGCCTCTGTTTATGCCTGACGCCAGCCTTGCCTCCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CAA 90 bp | TACAGCCAGCCCTGTCCAGCGAGGCTGGCACGTGGCTCCAGGTTCCTGGGGAAGTCTAGTGGGTGCTTCTaGGACAGCAGATCCATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YSQPCPARLARGSRFLGKSSGCF*DSRSMR Trigger: TCTCATGGATCTGCTGTCCAAGAAGCACCCACTAGA...CTTCCCCAGGAACCTGGAGCCACGTGCCAGCCTCGCTGGACAGGGCTGGCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS TCA 90 bp | CAGAGTTCGGTTTACAGCCACACCCAGTGTAGGCAACGTGGCTTGTaGGGTCAGCACTGCCACCAGAAGCTTCTGCCTGATGCCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QSSVYSHTQCRQRGL*GQHCHQKLLPDAQL Trigger: GAGCTGGGCATCAGGCAGAAGCTTCTGGTGGCAGTGCTGACCTCACAAGCCACGTTGCCTACACTGGGTGTGGCTGTAAACCGAACTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAGGACAAAAGTCATCGCCGTGTaGCTCCAGCAGGTGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSQLHLLQQSIYSPAPRTKVIAV*LQQVAQ Trigger: CTGCGCCACCTGCTGGAGCAACACGGCGATGACTTT...TGTCCTGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGGCAAGGCTGGCGTCAGGCATAAACAGAGGCCACAGCCTGAATCAGCACTCCCACTGCAATTCTaGAATCTCCTGGTACGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGGKAGVRHKQRPQPESALPLQF*NLLVRA Trigger: CGCACGTACCAGGAGATTCAAGAATTGCAGTGGGAG...TGCTGATTCAGGCTGTGGCCTCTGTTTATGCCTGACGCCAGCCTTGCCTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCAGCTTCACCTCCTCCAACAATCCATCTACAGCCCAGCTCCCAGGACATCTGCCACGTGGGCCTaGACAGGTGCGAAGACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSQLHLLQQSIYSPAPRTSATWA*TGAKTS Trigger: AGACGTCTTCGCACCTGTCAAGGCCCACGTGGCAGA...TGTCCTGGGAGCTGGGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CAA 90 bp | CATCAGGCACTTCCTAAGGTAGAAGGTAAGTTGTACAACTGGAATTCACTGTTACGCGCCGCGTTGGTGTaGCCGCGCGGCGGCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HQALPKVEGKLYNWNSLLRAALV*PRGGSS Trigger: TGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGCG...TAACAGTGAATTCCAGTTGTACAACTTACCTTCTACCTTAGGAAGTGCCTGATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124042.2 |
||
| CDS-3UTR CAA 90 bp | CGTGGATCCAGAAGGGAGAAGGCAGTAGATAACGTACCCCTCCTTTCTCAGCTTGCACTGACGATGTCGTaGCGGCAGCTTTCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RGSRREKAVDNVPLLSQLALTMS*RQLSRW Trigger: CCACCTGGAAAGCTGCCGCAACGACATCGTCAGTGC...AAGCTGAGAAAGGAGGGGTACGTTATCTACTGCCTTCTCCCTTCTGGATCCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
||
| CDS-3UTR CAA 90 bp | TGTACAACTGGAATTCACTGTTACTTAGAAGAAATTACTTCAATGCGTGGGCAGCTCAGAGTCTCCGGGTaGGGGCGGCCCGGGTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: CTTGIHCYLEEITSMRGQLRVSG*GRPGSA Trigger: TGCGGACCCGGGCCGCCCCAACCCGGAGACTCTGAG...CTGCCCACGCATTGAAGTAATTTCTTCTAAGTAACAGTGAATTCCAGTTGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124042.2 |
||
| CDS-3UTR CAA 90 bp | TGTTACTTAGAAGAAATTACTTCAATGCGTGGGCAGAGACATCAATGTGATGAGCATCTGACGGCCTTCTaGGTGGCCTGGCCTGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: CYLEEITSMRGQRHQCDEHLTAF*VAWPGC Trigger: GCAGCCAGGCCAGGCCACCAAGAAGGCCGTCAGATG...CTCATCACATTGATGTCTCTGCCCACGCATTGAAGTAATTTCTTCTAAGTAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124042.2 |
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| CDS-3UTR CAA 90 bp | CACTTAACCAGTTTATTAAAGCCAGAGCTTTATCGTGGATCCAGAAGGGAGAAGCTCCCACTGCAATTCTaGAATCTCCTGGTACGTGCG | + |
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Preference number: 5 (lower is better) Translates to: HLTSLLKPELYRGSRREKLPLQF*NLLVRA Trigger: CGCACGTACCAGGAGATTCAAGAATTGCAGTGGGAG...CTTCTCCCTTCTGGATCCACGATAAAGCTCTGGCTTTAATAAACTGGTTAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS CAA 90 bp | GCGCCGGCCCCGGGCCTCTCGCGCTCGGATCCGGGCTGCACCGAGTaGGGCCGGCGCGCCGCGTTGGTGTTGCCGCGCGGCGGCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: APAPGLSRSDPGCTE*GRRAALVLPRGGSS Trigger: TGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGCGCCGGCCCAACTCGGTGCAGCCCGGATCCGAGCGCGAGAGGCCCGGGGCCGGCGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS GCA 72 bp | GCGCCGGCCCCGGGCCTCTCGCGCTCGGATCCGGGCTaGACCGAGTTGGGCCGGCGCGCCGCGTTGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: APAPGLSRSDPG*TELGRRAALVL Trigger: CAACACCAACGCGGCGCGCCGGCCCAACTCGGTGCAGCCCGGATCCGAGCGCGAGAGGCCCGGGGCCGGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS CCA 72 bp | CGGGCCTCTCGCGCTCGGATCCGGGCTGCACCGAGTTaGGCCGGCGCGCCGCGTTGGTGTTGCCGCGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: RASRARIRAAPS*AGAPRWCCRAA Trigger: CGCCGCGCGGCAACACCAACGCGGCGCGCCGGCCCAACTCGGTGCAGCCCGGATCCGAGCGCGAGAGGCCCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS CAA 72 bp | CCGGGCCTCTCGCGCTCGGATCCGGGCTGCACCGAGTaGGGCCGGCGCGCCGCGTTGGTGTTGCCGCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: PGLSRSDPGCTE*GRRAALVLPRG Trigger: GCCGCGCGGCAACACCAACGCGGCGCGCCGGCCCAACTCGGTGCAGCCCGGATCCGAGCGCGAGAGGCCCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS CAA 90 bp | TCGCGCTCGGATCCGGGCTGCACCGAGTTGGGCCGGCGCGCCGCGTaGGTGTTGCCGCGCGGCGGCAGCTCAGAGTCTCCGGGTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: SRSDPGCTELGRRAA*VLPRGGSSESPGWG Trigger: GCCCCAACCCGGAGACTCTGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGCGCCGGCCCAACTCGGTGCAGCCCGGATCCGAGCGCGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS GCA 72 bp | GGGCAAGACACGAGGCTCCCAGCTCTCACCGGTGCCTaGGCCGGCCCCGGGCCTCTCGCGCTCGGATCCGGG | + |
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Preference number: 6 (lower is better) Translates to: GQDTRLPALTGA*AGPGPLALGSG Trigger: CCCGGATCCGAGCGCGAGAGGCCCGGGGCCGGCGCAGGCACCGGTGAGAGCTGGGAGCCTCGTGTCTTGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS GCA 72 bp | GCTGCACCGAGTTGGGCCGGCGCGCCGCGTTGGTGTTaGCGCGCGGCGGCAGCTCAGAGTCTCCGGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: AAPSWAGAPRWC*RAAAAQSLRVG Trigger: CCCAACCCGGAGACTCTGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGCGCCGGCCCAACTCGGTGCAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS CCA 72 bp | GTGTTGCCGCGCGGCGGCAGCTCAGAGTCTCCGGGTTaGGGCGGCCCGGGTCCGCAAGGCTCCTCCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: VLPRGGSSESPG*GGPGPQGSSTQ Trigger: CTGGGTGGAGGAGCCTTGCGGACCCGGGCCGCCCCAACCCGGAGACTCTGAGCTGCCGCCGCGCGGCAACAC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS CCA 72 bp | ATCCGGGCTGCACCGAGTTGGGCCGGCGCGCCGCGTTaGTGTTGCCGCGCGGCGGCAGCTCAGAGTCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: IRAAPSWAGAPR*CCRAAAAQSLR Trigger: CCGGAGACTCTGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGCGCCGGCCCAACTCGGTGCAGCCCGGAT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS CAA 72 bp | GGTGTTGCCGCGCGGCGGCAGCTCAGAGTCTCCGGGTaGGGGCGGCCCGGGTCCGCAAGGCTCCTCCACCCA | + |
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Preference number: 6 (lower is better) Translates to: GVAARRQLRVSG*GRPGSARLLHP Trigger: TGGGTGGAGGAGCCTTGCGGACCCGGGCCGCCCCAACCCGGAGACTCTGAGCTGCCGCCGCGCGGCAACACC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS CAA 72 bp | GGCTGCACCGAGTTGGGCCGGCGCGCCGCGTTGGTGTaGCCGCGCGGCGGCAGCTCAGAGTCTCCGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GCTELGRRAALV*PRGGSSESPGW Trigger: CCAACCCGGAGACTCTGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGCGCCGGCCCAACTCGGTGCAGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS CAA 72 bp | GATCCGGGCTGCACCGAGTTGGGCCGGCGCGCCGCGTaGGTGTTGCCGCGCGGCGGCAGCTCAGAGTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: DPGCTELGRRAA*VLPRGGSSESP Trigger: CGGAGACTCTGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGCGCCGGCCCAACTCGGTGCAGCCCGGATC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS CAA 90 bp | CGCCGCGTTGGTGTTGCCGCGCGGCGGCAGCTCAGAGTCTCCGGGTaGGGGCGGCCCGGGTCCGCAAGGCTCCTCCACCCAGGTGACGCT | + |
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Preference number: 6 (lower is better) Translates to: RRVGVAARRQLRVSG*GRPGSARLLHPGDA Trigger: AGCGTCACCTGGGTGGAGGAGCCTTGCGGACCCGGGCCGCCCCAACCCGGAGACTCTGAGCTGCCGCCGCGCGGCAACACCAACGCGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079205.14 ENSMUST00000124042.2 ENSMUST00000138683.2 |
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| CDS TCA 72 bp | GGGCCTCTCTTCGCCCAGTGCCACCACCGCCATGCCTaGAGGTGTCCGGCGGCCCCTCGCACCGGTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GPLFAQCHHRHA*RCPAAPRTGQE Trigger: TTCCTGACCGGTGCGAGGGGCCGCCGGACACCTTCAGGCATGGCGGTGGTGGCACTGGGCGAAGAGAGGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
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| CDS GCA 72 bp | TCGCCGTGTTGCTCCAGCAGGTGGCGCAGCGCCAGGTaGAGGTGTCCGATGGGCCTCTCTTCGCCCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SPCCSSRWRSAR*RCPMGLSSPSA Trigger: GGCACTGGGCGAAGAGAGGCCCATCGGACACCTGCACCTGGCGCTGCGCCACCTGCTGGAGCAACACGGCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS GCA 72 bp | GTCCGGCGGCCCCTCGCACCGGTCAGGAACACTACATaGTCCAGTCGGTGTCCCAGAGTTCGGTTTACAGCC | + |
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Preference number: 6 (lower is better) Translates to: VRRPLAPVRNTT*SSRCPRVRFTA Trigger: GGCTGTAAACCGAACTCTGGGACACCGACTGGAGCATGTAGTGTTCCTGACCGGTGCGAGGGGCCGCCGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
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| CDS CCA 72 bp | ATACCGAGTTCTGACGGCCTTCTTGGTGGCCTGGCCTaGCTGCGCGGGATGGTAGGGCAAGACACGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: IPSSDGLLGGLA*LRGMVGQDTRL Trigger: GAGCCTCGTGTCTTGCCCTACCATCCCGCGCAGCCAGGCCAGGCCACCAAGAAGGCCGTCAGAACTCGGTAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
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| CDS GCA 72 bp | GGCACTAGGAAAAACCAGTCAAAGTCATCGCCGTGTTaGTCCAGCAGGTGGCGCAGCGCCAGGTGCAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GTRKNQSKSSPC*SSRWRSARCRC Trigger: ACACCTGCACCTGGCGCTGCGCCACCTGCTGGAGCAACACGGCGATGACTTTGACTGGTTTTTCCTAGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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| CDS GCA 72 bp | GTGGCTTGTGAGGTCAGCACTGCCACCAGAAGCTTCTaGCTGATGCCCAGCTCCGTGCTGATATACCGAGTT | + |
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Preference number: 6 (lower is better) Translates to: VACEVSTATRSF*LMPSSVLIYRV Trigger: AACTCGGTATATCAGCACGGAGCTGGGCATCAGGCAGAAGCTTCTGGTGGCAGTGCTGACCTCACAAGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
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| CDS TCA 72 bp | GTTTACAGCCACACCCAGTGTAGGCAACGTGGCTTGTaGGGTCAGCACTGCCACCAGAAGCTTCTGCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: VYSHTQCRQRGL*GQHCHQKLLPD Trigger: ATCAGGCAGAAGCTTCTGGTGGCAGTGCTGACCTCACAAGCCACGTTGCCTACACTGGGTGTGGCTGTAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079205.14 |
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| CDS CCA 72 bp | CAGCTAGGCGGTCCAGTCCATGCGCTTCAGTATAGGTaGCATCAGGCACTAGGAAAAACCAGTCAAAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: QLGGPVHALQYR*HQALGKTSQSH Trigger: ATGACTTTGACTGGTTTTTCCTAGTGCCTGATGCCACCTATACTGAAGCGCATGGACTGGACCGCCTAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079205.14 ENSMUST00000094818.4 |
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