Pregenerated sensors for CHN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004633Ensembl transcript IDs: ENSMUST00000046856.14, ENSMUST00000067741.10, ENSMUST00000114401.8, ENSMUST00000114402.9, ENSMUST00000127323.3, ENSMUST00000133315.4, ENSMUST00000146114.8, ENSMUST00000203091.3, ENSMUST00000203941.3, ENSMUST00000204115.3, ENSMUST00000204746.2, ENSMUST00000204921.3
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGACCCAAGGTAAGGGGTTTCCTACCCTCACCCTTGCTCTCACGTaGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: KTQGKGFPTLTLALT*RRETQSPTLRSTVV Trigger: GACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGAGCAAGGGTGAGGGTAGGAAACCCCTTACCTTGGGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
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| 3UTR GCA 90 bp | CCACGATTCTGCCTGCAGGGCCTGGGGAGGCTAATAGAGCACTTCTaGAGTCTCTATCACTGTAACAGGGCAGTTTTCTTCTGGGCACTC | + |
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Preference number: 1 (lower is better) Translates to: PRFCLQGLGRLIEHF*SLYHCNRAVFFWAL Trigger: GAGTGCCCAGAAGAAAACTGCCCTGTTACAGTGATAGAGACTGCAGAAGTGCTCTATTAGCCTCCCCAGGCCCTGCAGGCAGAATCGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| 3UTR TCA 90 bp | GTGAACTCTCATGGAAGAACTCATCGGGACAGAGGTATGTCAAGGTaGCACTGCATTCACGGTCAACGTTCACCAGGCATCACAGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: VNSHGRTHRDRGMSR*HCIHGQRSPGITAR Trigger: TCTTGCTGTGATGCCTGGTGAACGTTGACCGTGAATGCAGTGTCACCTTGACATACCTCTGTCCCGATGAGTTCTTCCATGAGAGTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| 3UTR TCA 90 bp | TCATTTTCGCGATGTACTCAGCAGCCTTGGTCTCTATGTAGAGTGTaGTCAAGCCATCTGTCACCAGGTCGTGAATGGATTCGAACCTCT | + |
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Preference number: 1 (lower is better) Translates to: SFSRCTQQPWSLCRV*SSHLSPGREWIRTS Trigger: AGAGGTTCGAATCCATTCACGACCTGGTGACAGATGGCTTGATCACACTCTACATAGAGACCAAGGCTGCTGAGTACATCGCGAAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133315.4 |
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| 3UTR TCA 90 bp | AATGAAAGAAAGGAACAAGATTCAACAATGATCCTTCAAGGTTCATaGTTCATCCATATGGAAATGCGGCAAAGAATTTCAACTTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: NERKEQDSTMILQGS*FIHMEMRQRISTCH Trigger: ATGGCAAGTTGAAATTCTTTGCCGCATTTCCATATGGATGAATCATGAACCTTGAAGGATCATTGTTGAATCTTGTTCCTTTCTTTCATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| 3UTR-3UTR CCA 90 bp | CTGCACGATCAGCTTTTGGTACCGCATGTCATGGAGGGTGGTGAGGGTGCTGTCGGGGTCTCATCAGGGTaGGCCCAAACACGATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: LHDQLLVPHVMEGGEGAVGVSSG*AQTRSP Trigger: TGGGGATCGTGTTTGGGCCCACCCTGATGAGACCCC...GACAGCACCCTCACCACCCTCCATGACATGCGGTACCAAAAGCTGATCGTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
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| 3UTR-3UTR GCA 90 bp | CCATTGGCATCAGTCTCAAGGGCCTGGCTGAGGAGAGGGAAAGTGCTAATTCTGCACAGTCCCCAACTCTaGGATCCACTGTGGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PLASVSRAWLRRGKVLILHSPQL*DPLWSR Trigger: CCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTG...CAGAATTAGCACTTTCCCTCTCCTCAGCCAGGCCCTTGAGACTGATGCCAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| 3UTR-3UTR GCA 90 bp | GACATACATACGAGGCACGGCAAAAGACCCAAGGTAAGGGGTTTCCTACCCTCACACAGTCCCCAACTCTaGGATCCACTGTGGTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: DIHTRHGKRPKVRGFLPSHSPQL*DPLWSR Trigger: CCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTG...TGAGGGTAGGAAACCCCTTACCTTGGGTCTTTTGCCGTGCCTCGTATGTATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
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| 3UTR-3UTR CCA 90 bp | CACGGCAAAAGACCCAAGGTAAGGGGTTTCCTACCCTCACCCTTGCTCTCACGTCTCTGCGATCCACTGTaGTCCAGGAAATTCTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: HGKRPKVRGFLPSPLLSRLCDPL*SRKFCH Trigger: GTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAG...ACGTGAGAGCAAGGGTGAGGGTAGGAAACCCCTTACCTTGGGTCTTTTGCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGCCATCTGTCACCAGGTCGTGAATGGATTCGAACCTCTTCTCACCCACAAACAGCGTGTAGCATCCTaGCTGCCGCTGGCTTTCTCG | + |
|
Preference number: 2 (lower is better) Translates to: QAICHQVVNGFEPLLTHKQRVAS*LPLAFS Trigger: CGAGAAAGCCAGCGGCAGCCAGGATGCTACACGCTG...TTTGTGGGTGAGAAGAGGTTCGAATCCATTCACGACCTGGTGACAGATGGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133315.4 |
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| 3UTR-3UTR CCA 90 bp | GAACTCATCGGGACAGAGGTATGTCAAGGTGACACTGCATTCACGGTCAACGTTCTCTGCGATCCACTGTaGTCCAGGAAATTCTGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: ELIGTEVCQGDTAFTVNVLCDPL*SRKFCH Trigger: GTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAG...AACGTTGACCGTGAATGCAGTGTCACCTTGACATACCTCTGTCCCGATGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| 3UTR CAA 90 bp | AGGTTCATGATTCATCCATATGGAAATGCGGCAAAGAATTTCAACTaGCCATTGGCATCAGTCTCAAGGGCCTGGCTGAGGAGAGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RFMIHPYGNAAKNFN*PLASVSRAWLRRGK Trigger: TTTCCCTCTCCTCAGCCAGGCCCTTGAGACTGATGCCAATGGCAAGTTGAAATTCTTTGCCGCATTTCCATATGGATGAATCATGAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| 3UTR-3UTR CCA 90 bp | CAAATCTGTACAGTCATGAGGGACAGTGACAGCAGAGAGCAAGCCAAACTGAGCTTCCATAACATCCTTTaGGAAGCCTCAAAAAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: QICTVMRDSDSREQAKLSFHNIL*EASKSP Trigger: TGGGCTTTTTGAGGCTTCCCAAAGGATGTTATGGAA...GCTCAGTTTGGCTTGCTCTCTGCTGTCACTGTCCCTCATGACTGTACAGATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| 3UTR CCA 72 bp | GGTAAGGGGTTTCCTACCCTCACCCTTGCTCTCACGTaGAGGCGGGAGACACAGTCCCCAACTCTGCGATCC | + |
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Preference number: 3 (lower is better) Translates to: GKGFPTLTLALT*RRETQSPTLRS Trigger: GGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGAGCAAGGGTGAGGGTAGGAAACCCCTTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
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| 3UTR GCA 72 bp | CTCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTaGGATCCACTGTGGTCCAGGAAATTCTGCCACTTG | + |
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Preference number: 3 (lower is better) Translates to: LSRGGGRHSPQL*DPLWSRKFCHL Trigger: CAAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| 3UTR-3UTR CAA 90 bp | GAACTCATCGGGACAGAGGTATGTCAAGGTGACACTGCATTCACGGTCAACGTTTTCCTACCCTCACCCTaGCTCTCACGTGGAGGCGGG | + |
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Preference number: 3 (lower is better) Translates to: ELIGTEVCQGDTAFTVNVFLPSP*LSRGGG Trigger: CCCGCCTCCACGTGAGAGCAAGGGTGAGGGTAGGAA...AACGTTGACCGTGAATGCAGTGTCACCTTGACATACCTCTGTCCCGATGAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| 3UTR TCA 72 bp | AGGGCCTGGCTGAGGAGAGGGAAAGTGCTAATTCTGTaGCACCGTCCAGCTGCATCCAGTGTCCTCAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: RAWLRRGKVLIL*HRPAASSVLKS Trigger: TGACTTGAGGACACTGGATGCAGCTGGACGGTGTCACAGAATTAGCACTTTCCCTCTCCTCAGCCAGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| 3UTR TCA 72 bp | AGCAGGAGCTGTGAAAAGCAGGGGCACGAGGAGGTGTaGACTCTCATGGAAGAACTCATCGGGACAGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: SRSCEKQGHEEV*TLMEELIGTEV Trigger: TACCTCTGTCCCGATGAGTTCTTCCATGAGAGTTCACACCTCCTCGTGCCCCTGCTTTTCACAGCTCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| 3UTR CCA 72 bp | GTGAAAAGCAGGGGCACGAGGAGGTGTGAACTCTCATaGAAGAACTCATCGGGACAGAGGTATGTCAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: VKSRGTRRCELS*KNSSGQRYVKV Trigger: CACCTTGACATACCTCTGTCCCGATGAGTTCTTCCATGAGAGTTCACACCTCCTCGTGCCCCTGCTTTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| 3UTR TCA 72 bp | CATGGAAGAACTCATCGGGACAGAGGTATGTCAAGGTaGCACTGCATTCACGGTCAACGTTCACCAGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: HGRTHRDRGMSR*HCIHGQRSPGI Trigger: GATGCCTGGTGAACGTTGACCGTGAATGCAGTGTCACCTTGACATACCTCTGTCCCGATGAGTTCTTCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| 3UTR TCA 72 bp | CGATGTACTCAGCAGCCTTGGTCTCTATGTAGAGTGTaGTCAAGCCATCTGTCACCAGGTCGTGAATGGATT | + |
|
Preference number: 3 (lower is better) Translates to: RCTQQPWSLCRV*SSHLSPGREWI Trigger: AATCCATTCACGACCTGGTGACAGATGGCTTGATCACACTCTACATAGAGACCAAGGCTGCTGAGTACATCG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133315.4 |
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| 3UTR-3UTR CAA 90 bp | AACATACACTATCTCACAGCAGAAAAGCCAGTGCTGAGGAGCAGGAGCTGTGAAAATTGTCTTCTCTTTTaGAAGGTGGGAAATGCATAC | + |
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Preference number: 3 (lower is better) Translates to: NIHYLTAEKPVLRSRSCENCLLF*KVGNAY Trigger: GTATGCATTTCCCACCTTCAAAAAGAGAAGACAATT...TTCACAGCTCCTGCTCCTCAGCACTGGCTTTTCTGCTGTGAGATAGTGTATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| 3UTR TCA 72 bp | GAAGGTGGGAAATGCATACTGTACCAAGTACCTTTATaGACTAAGTTCCCTTTTATTACTGTTAAGACCGAA | + |
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Preference number: 3 (lower is better) Translates to: EGGKCILYQVPL*TKFPFITVKTE Trigger: TTCGGTCTTAACAGTAATAAAAGGGAACTTAGTTCATAAAGGTACTTGGTACAGTATGCATTTCCCACCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
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| 3UTR TCA 72 bp | AAGGAACAAGATTCAACAATGATCCTTCAAGGTTCATaGTTCATCCATATGGAAATGCGGCAAAGAATTTCA | + |
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Preference number: 3 (lower is better) Translates to: KEQDSTMILQGS*FIHMEMRQRIS Trigger: TGAAATTCTTTGCCGCATTTCCATATGGATGAATCATGAACCTTGAAGGATCATTGTTGAATCTTGTTCCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| CDS-3UTR TCA 90 bp | CTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGTGTCATGGAGGGTGGTaGGGGTGCTGTCCTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LTWRRETQSPTLRSTVVQCHGGW*GCCPQG Trigger: CCCCTGAGGACAGCACCCTCACCACCCTCCATGACA...CTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR TCA 90 bp | CGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATGTCATGGAGGGTGGTaGGGGTGCTGTCCTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RGGGRHSPQLCDPLWSRKCHGGW*GCCPQG Trigger: CCCCTGAGGACAGCACCCTCACCACCCTCCATGACA...TTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR CCA 90 bp | CTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAACACCGGACTCCCTaGGCGATGAGCCCCCACATA | + |
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Preference number: 4 (lower is better) Translates to: LTWRRETQSPTLRSTVVQEHRTP*AMSPHI Trigger: TATGTGGGGGCTCATCGCCCAGGGAGTCCGGTGTTC...CTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR CCA 90 bp | CTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGGGGTCTCATCAGGGTaGGCCCAAACACGATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LTWRRETQSPTLRSTVVQGVSSG*AQTRSP Trigger: TGGGGATCGTGTTTGGGCCCACCCTGATGAGACCCC...CTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR TCA 90 bp | TGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTTGTCATGGAGGGTGGTaGGGGTGCTGTCCTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: WRRETQSPTLRSTVVQEICHGGW*GCCPQG Trigger: CCCCTGAGGACAGCACCCTCACCACCCTCCATGACA...AATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR GCA 90 bp | CTCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCGGGCCCCGGAATGTGTaGACCTTGAAGTTGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LSRGGGRHSPQLCDPLWSGPRNV*TLKLCV Trigger: GACACACAACTTCAAGGTGCACACATTCCGGGGCCC...GGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR GCA 90 bp | TCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGCTCTTGGCGCTTCCTaGTGGGCTTGGACTTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: SHVEAGDTVPNSAIHCGPALGAS*WAWTSE Trigger: TTCGGAAGTCCAAGCCCAGCAGGAAGCGCCAAGAGC...TGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
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| CDS-3UTR GCA 90 bp | TCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGGCCCCGGAATGTGTaGACCTTGAAGTTGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: SHVEAGDTVPNSAIHCGPGPRNV*TLKLCV Trigger: GACACACAACTTCAAGGTGCACACATTCCGGGGCCC...TGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR CCA 90 bp | CTCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCGATCCTCTTGAGATCTaGCTGGCAGTCATTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LSRGGGRHSPQLCDPLWSDPLEI*LAVIGD Trigger: GTCCCCAATGACTGCCAGCCAGATCTCAAGAGGATC...GGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR TCA 90 bp | AGTTTAAGGTCTGGTTCCCAAACCTCAGTGCCAGCGTGTAGCATCCTGGCTGCCCCTGCTCCCGAGAGATaGTCCCATGAAACCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: SLRSGSQTSVPACSILAAPAPER*SHETSR Trigger: CCGGGAGGTTTCATGGGATCATCTCTCGGGAGCAGG...GGCAGCCAGGATGCTACACGCTGGCACTGAGGTTTGGGAACCAGACCTTAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133315.4 |
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| CDS-3UTR GCA 90 bp | CGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAAAGAAGCTCATCAGCCTaGTCCCGAGAGATGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: RGGGRHSPQLCDPLWSRKRSSSA*SREMIP Trigger: TGGGATCATCTCTCGGGAGCAGGCTGATGAGCTTCT...TTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
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| CDS-3UTR GCA 90 bp | TCCTACCCTCACCCTTGCTCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTTTCTCACCCACAAAGTaGTTCCCGTCGTGGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SYPHPCSHVEAGDTVPNSFSPTK*FPSWKS Trigger: GCTCTTCCACGACGGGAAGCACTTTGTGGGTGAGAA...AGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGAGCAAGGGTGAGGGTAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
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| CDS-3UTR CCA 90 bp | CGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAAGATCCTCTTGAGATCTaGCTGGCAGTCATTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: RGGGRHSPQLCDPLWSRKDPLEI*LAVIGD Trigger: GTCCCCAATGACTGCCAGCCAGATCTCAAGAGGATC...TTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR CCA 90 bp | CACGATCAGCTTTTGGTACCGCATGTCATGGAGGGTGGTGAGGGTGCTGTCCTCCTTGGCGCTTCCTGCTaGGCTTGGACTTCCGAACCA | + |
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Preference number: 4 (lower is better) Translates to: HDQLLVPHVMEGGEGAVLLGASC*AWTSEP Trigger: TGGTTCGGAAGTCCAAGCCCAGCAGGAAGCGCCAAG...GAGGACAGCACCCTCACCACCCTCCATGACATGCGGTACCAAAAGCTGATCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
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| CDS-3UTR TCA 90 bp | ACGATCAGCTTTTGGTACCGCATGTCATGGAGGGTGGTGAGGGTGCTGTCCTCAGGTTGTCGTTGTGTGTaGGGGCAGCTCTTCGGACCA | + |
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Preference number: 4 (lower is better) Translates to: TISFWYRMSWRVVRVLSSGCRCV*GQLFGP Trigger: TGGTCCGAAGAGCTGCCCTCACACACAACGACAACC...TGAGGACAGCACCCTCACCACCCTCCATGACATGCGGTACCAAAAGCTGATCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
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| CDS-3UTR GCA 90 bp | GGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACGGGCCCCGGAATGTGTaGACCTTGAAGTTGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GRHSPQLCDPLWSRKFCHGPRNV*TLKLCV Trigger: GACACACAACTTCAAGGTGCACACATTCCGGGGCCC...GTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR GCA 90 bp | TCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCACAGTCATTGGGGACGTaGTTGGAGCACTGTTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SHVEAGDTVPNSAIHCGPQSLGT*LEHCLC Trigger: ACACAAACAGTGCTCCAAGCACGTCCCCAATGACTG...TGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR GCA 90 bp | CGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAACAGTCATTGGGGACGTaGTTGGAGCACTGTTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: RGGGRHSPQLCDPLWSRKQSLGT*LEHCLC Trigger: ACACAAACAGTGCTCCAAGCACGTCCCCAATGACTG...TTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR CCA 90 bp | GAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTCAGCGTGTAGCATCCTaGCTGCCGCTGGCTTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: ETQSPTLRSTVVQEILPLQRVAS*LPLAFS Trigger: CGAGAAAGCCAGCGGCAGCCAGGATGCTACACGCTG...AAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
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| CDS-3UTR CCA 90 bp | TCCTACCCTCACCCTTGCTCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTCATTGGGGACGTGCTTaGAGCACTGTTTGTGTACGT | + |
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Preference number: 4 (lower is better) Translates to: SYPHPCSHVEAGDTVPNSHWGRA*STVCVR Trigger: ACGTACACAAACAGTGCTCCAAGCACGTCCCCAATG...AGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGAGCAAGGGTGAGGGTAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
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| CDS-3UTR TCA 90 bp | AGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTGGGTTGTCGTTGTGTGTaGGGGCAGCTCTTCGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RHSPQLCDPLWSRKFCHLGCRCV*GQLFGP Trigger: TGGTCCGAAGAGCTGCCCTCACACACAACGACAACC...CAAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR TCA 90 bp | CTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGGAATGTGTGCACCTTaGAGTTGTGTGTCTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTWRRETQSPTLRSTVVQGMCAP*SCVSSH Trigger: ATGAGAAGACACACAACTTCAAGGTGCACACATTCC...CTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTGATCCTCTTGAGATCTaGCTGGCAGTCATTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WRRETQSPTLRSTVVQEIDPLEI*LAVIGD Trigger: GTCCCCAATGACTGCCAGCCAGATCTCAAGAGGATC...AATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCTGTCTGGGTAGATGTTaGCAGAGATATCCGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSRGGGRHSPQLCDPLWSCLGRC*QRYPPF Trigger: AAAAGGCGGATATCTCTGCCAACATCTACCCAGACA...GGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CCA 90 bp | GACATACATACGAGGCACGGCAAAAGACCCAAGGTAAGGGGTTTCCTACCCTCAGGGGTCTCATCAGGGTaGGCCCAAACACGATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DIHTRHGKRPKVRGFLPSGVSSG*AQTRSP Trigger: TGGGGATCGTGTTTGGGCCCACCCTGATGAGACCCC...TGAGGGTAGGAAACCCCTTACCTTGGGTCTTTTGCCGTGCCTCGTATGTATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
||
| CDS-3UTR CCA 90 bp | GACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTGTTGGTACCGCATGTCATaGAGGGTGGTGAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTVPNSAIHCGPGNSATCWYRMS*RVVRVL Trigger: CAGCACCCTCACCACCCTCCATGACATGCGGTACCA...ACAAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CCA 90 bp | AGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTGCTTGGCGCTTCCTGCTaGGCTTGGACTTCCGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RHSPQLCDPLWSRKFCHLLGASC*AWTSEP Trigger: TGGTTCGGAAGTCCAAGCCCAGCAGGAAGCGCCAAG...CAAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
||
| CDS-3UTR TCA 90 bp | TCCTACCCTCACCCTTGCTCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTTCTCTATGTAGAGTGTaGTCAAGCCATCTGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SYPHPCSHVEAGDTVPNSSLCRV*SSHLSP Trigger: TGGTGACAGATGGCTTGATCACACTCTACATAGAGA...AGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGAGCAAGGGTGAGGGTAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR GCA 90 bp | TGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCAGTCATTGGGGACGTaGTTGGAGCACTGTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WRRETQSPTLRSTVVQEIQSLGT*LEHCLC Trigger: ACACAAACAGTGCTCCAAGCACGTCCCCAATGACTG...AATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR GCA 90 bp | CACGATCAGCTTTTGGTACCGCATGTCATGGAGGGTGGTGAGGGTGCTGTCCTCCAGTCATTGGGGACGTaGTTGGAGCACTGTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HDQLLVPHVMEGGEGAVLQSLGT*LEHCLC Trigger: ACACAAACAGTGCTCCAAGCACGTCCCCAATGACTG...GAGGACAGCACCCTCACCACCCTCCATGACATGCGGTACCAAAAGCTGATCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR GCA 90 bp | ACGATCAGCTTTTGGTACCGCATGTCATGGAGGGTGGTGAGGGTGCTGTCCTCACACCTTGACCCCAAATaGAATGGCCAGCAGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TISFWYRMSWRVVRVLSSHLDPK*NGQQLL Trigger: CAAGAGCTGCTGGCCATTGCATTTGGGGTCAAGGTG...TGAGGACAGCACCCTCACCACCCTCCATGACATGCGGTACCAAAAGCTGATCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR CCA 90 bp | ACGATCAGCTTTTGGTACCGCATGTCATGGAGGGTGGTGAGGGTGCTGTCCTCAGATCCTCTTGAGATCTaGCTGGCAGTCATTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TISFWYRMSWRVVRVLSSDPLEI*LAVIGD Trigger: GTCCCCAATGACTGCCAGCCAGATCTCAAGAGGATC...TGAGGACAGCACCCTCACCACCCTCCATGACATGCGGTACCAAAAGCTGATCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR CCA 90 bp | TCCTACCCTCACCCTTGCTCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTTGTCTGGGTAGATGTTaGCAGAGATATCCGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SYPHPCSHVEAGDTVPNSCLGRC*QRYPPF Trigger: AAAAGGCGGATATCTCTGCCAACATCTACCCAGACA...AGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGAGCAAGGGTGAGGGTAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
||
| CDS-3UTR CCA 90 bp | GACATACATACGAGGCACGGCAAAAGACCCAAGGTAAGGGGTTTCCTACCCTCATGGTACCGCATGTCATaGAGGGTGGTGAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DIHTRHGKRPKVRGFLPSWYRMS*RVVRVL Trigger: CAGCACCCTCACCACCCTCCATGACATGCGGTACCA...TGAGGGTAGGAAACCCCTTACCTTGGGTCTTTTGCCGTGCCTCGTATGTATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
||
| CDS-3UTR GCA 90 bp | AGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTGCACCTTGACCCCAAATaGAATGGCCAGCAGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RHSPQLCDPLWSRKFCHLHLDPK*NGQQLL Trigger: CAAGAGCTGCTGGCCATTGCATTTGGGGTCAAGGTG...CAAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
||
| CDS-3UTR CCA 90 bp | ACGATCAGCTTTTGGTACCGCATGTCATGGAGGGTGGTGAGGGTGCTGTCCTCACATTGGGGACGTGCTTaGAGCACTGTTTGTGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: TISFWYRMSWRVVRVLSSHWGRA*STVCVR Trigger: ACGTACACAAACAGTGCTCCAAGCACGTCCCCAATG...TGAGGACAGCACCCTCACCACCCTCCATGACATGCGGTACCAAAAGCTGATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR CCA 90 bp | CTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGATGATGTTTATGTCTaGGTAGATGTTGGCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTWRRETQSPTLRSTVVQDDVYV*VDVGRD Trigger: ATCTCTGCCAACATCTACCCAGACATAAACATCATC...CTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTGCCTCTTGCTGCAGCTaGTACAAGTATGATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WRRETQSPTLRSTVVQEIASCCS*YKYDFH Trigger: ATGGAAATCATACTTGTATCAGCTGCAGCAAGAGGC...AATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR TCA 90 bp | GCTTCCCGTCGTGGAAGAGCCGGTAGTTTAAGGTCTGGTTCCCAAACCTCAGTGGCCTCTTGCTGCAGCTaGTACAAGTATGATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASRRGRAGSLRSGSQTSVASCCS*YKYDFH Trigger: ATGGAAATCATACTTGTATCAGCTGCAGCAAGAGGC...CACTGAGGTTTGGGAACCAGACCTTAAACTACCGGCTCTTCCACGACGGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133315.4 |
||
| CDS-3UTR TCA 90 bp | AAGTGTGAGAAACGTTTTTATTCCACTAGCTCTATCAGCTCACTTCCCTGGTGGCCTCCCGGGGACAAATaGTCCTCTTGGGACGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KCEKRFYSTSSISSLPWWPPGDK*SSWDEV Trigger: CACCTCGTCCCAAGAGGATCATTTGTCCCCGGGAGG...CCACCAGGGAAGTGAGCTGATAGAGCTAGTGGAATAAAAACGTTTCTCACACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR GCA 90 bp | TCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCACGCATTGGAGATTTTTaGTGCCTCTATAAATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SHVEAGDTVPNSAIHCGPRIGDF*CLYKFG Trigger: TCCAAATTTATAGAGGCAGCAAAAATCTCCAATGCG...TGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAACGCATTGGAGATTTTTaGTGCCTCTATAAATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGGGRHSPQLCDPLWSRKRIGDF*CLYKFG Trigger: TCCAAATTTATAGAGGCAGCAAAAATCTCCAATGCG...TTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTGGGCCCAAACACGATCCCCAGATTTTCGGCATTCATTAAATTGTCCTTTGCTCTTGGCGCTTCCTaGTGGGCTTGGACTTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVGPNTIPRFSAFIKLSFALGAS*WAWTSE Trigger: TTCGGAAGTCCAAGCCCAGCAGGAAGCGCCAAGAGC...AAAGGACAATTTAATGAATGCCGAAAATCTGGGGATCGTGTTTGGGCCCACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR CCA 90 bp | AGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTGGCCTCTCATCCGCATTaGAGATTTTTGCTGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RHSPQLCDPLWSRKFCHLASHPH*RFLLPL Trigger: TAGAGGCAGCAAAAATCTCCAATGCGGATGAGAGGC...CAAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTAAGGTCTGGTTCCCAAACCTCAGTGCCAGCGTGTAGCATCCTGGCTGCCCAGCTGATACAAGTATaGTTTCCATATTGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRSGSQTSVPACSILAAQLIQV*FPYWRL Trigger: CAGCCTCCAATATGGAAATCATACTTGTATCAGCTG...GGCAGCCAGGATGCTACACGCTGGCACTGAGGTTTGGGAACCAGACCTTAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133315.4 |
||
| CDS-3UTR TCA 90 bp | GACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTGTGGAATGTGTGCACCTTaGAGTTGTGTGTCTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DTVPNSAIHCGPGNSATCGMCAP*SCVSSH Trigger: ATGAGAAGACACACAACTTCAAGGTGCACACATTCC...ACAAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR TCA 90 bp | TGTACAGTCATGAGGGACAGTGACAGCAGAGAGCAAGCCAAACTGAGCCCCAGAGGAATGTGTGCACCTTaGAGTTGTGTGTCTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CTVMRDSDSREQAKLSPRGMCAP*SCVSSH Trigger: ATGAGAAGACACACAACTTCAAGGTGCACACATTCC...TCTGGGGCTCAGTTTGGCTTGCTCTCTGCTGTCACTGTCCCTCATGACTGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
||
| CDS-3UTR TCA 90 bp | GACATACATACGAGGCACGGCAAAAGACCCAAGGTAAGGGGTTTCCTACCCTCAGTGTCTTCTCATAGTTaGAGTGGTTGTCGTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DIHTRHGKRPKVRGFLPSVSSHS*SGCRCV Trigger: CACACAACGACAACCACTTCAACTATGAGAAGACAC...TGAGGGTAGGAAACCCCTTACCTTGGGTCTTTTGCCGTGCCTCGTATGTATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
||
| CDS-3UTR GCA 90 bp | TGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCGCATTGGAGATTTTTaGTGCCTCTATAAATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WRRETQSPTLRSTVVQEIRIGDF*CLYKFG Trigger: TCCAAATTTATAGAGGCAGCAAAAATCTCCAATGCG...AATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGCCATCTGTCACCAGGTCGTGAATGGATTCGAACCTCTTCTCACCCACAATTCCATATTGGAGGCTaGTATTCCTCAGCATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSHLSPGREWIRTSSHPQFHIGG*YSSASE Trigger: CTCTGATGCTGAGGAATACCAGCCTCCAATATGGAA...TTGTGGGTGAGAAGAGGTTCGAATCCATTCACGACCTGGTGACAGATGGCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133315.4 |
||
| CDS-3UTR CCA 90 bp | AGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTGGATGATGTTTATGTCTaGGTAGATGTTGGCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RHSPQLCDPLWSRKFCHLDDVYV*VDVGRD Trigger: ATCTCTGCCAACATCTACCCAGACATAAACATCATC...CAAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CCA 90 bp | GAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTGATGATGTTTATGTCTaGGTAGATGTTGGCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ETQSPTLRSTVVQEILPLDDVYV*VDVGRD Trigger: ATCTCTGCCAACATCTACCCAGACATAAACATCATC...AAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CCA 90 bp | ATCACTCTTCCAGCAAAACAGACATACATACGAGGCACGGCAAAAGACCCAAGGGCCTCTCATCCGCATTaGAGATTTTTGCTGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ITLPAKQTYIRGTAKDPRASHPH*RFLLPL Trigger: TAGAGGCAGCAAAAATCTCCAATGCGGATGAGAGGC...CCTTGGGTCTTTTGCCGTGCCTCGTATGTATGTCTGTTTTGCTGGAAGAGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
||
| CDS-3UTR TCA 90 bp | GTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTGTTTGAATCAGCTGATACAAGTATaGTTTCCATATTGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPNSAIHCGPGNSATCLNQLIQV*FPYWRL Trigger: CAGCCTCCAATATGGAAATCATACTTGTATCAGCTG...ATTCAAACAAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR TCA 90 bp | ATCAGGGTGGGCCCAAACACGATCCCCAGATTTTCGGCATTCATTAAATTGTCCGTGTCTTCTCATAGTTaGAGTGGTTGTCGTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IRVGPNTIPRFSAFIKLSVSSHS*SGCRCV Trigger: CACACAACGACAACCACTTCAACTATGAGAAGACAC...GGACAATTTAATGAATGCCGAAAATCTGGGGATCGTGTTTGGGCCCACCCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGTGAGAAACGTTTTTATTCCACTAGCTCTATCAGCTCACTTCCCTGGTGGCATTGGGGACGTGCTTaGAGCACTGTTTGTGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: KCEKRFYSTSSISSLPWWHWGRA*STVCVR Trigger: ACGTACACAAACAGTGCTCCAAGCACGTCCCCAATG...CCACCAGGGAAGTGAGCTGATAGAGCTAGTGGAATAAAAACGTTTCTCACACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| 3UTR CAA 72 bp | CCTTTGGGAAGCCTCAAAAAGCCCACAGAAAGGAAATaGGCAGATGCTTCAGACCAGCCTAGAAACACTATG | + |
|
Preference number: 4 (lower is better) Translates to: PLGSLKKPTERK*ADASDQPRNTM Trigger: CATAGTGTTTCTAGGCTGGTCTGAAGCATCTGCCAATTTCCTTTCTGTGGGCTTTTTGAGGCTTCCCAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
||
| 3UTR CAA 72 bp | ATTCATCCATATGGAAATGCGGCAAAGAATTTCAACTaGCCATTGGCATCAGTCTCAAGGGCCTGGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHPYGNAAKNFN*PLASVSRAWLR Trigger: CCTCAGCCAGGCCCTTGAGACTGATGCCAATGGCAAGTTGAAATTCTTTGCCGCATTTCCATATGGATGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
||
| CDS-3UTR TCA 90 bp | GAATTGTCTTCTCTTTTTGAAGGTGGGAAATGCATACTGTACCAAGTACCTTTAGGTTGTCGTTGTGTGTaGGGGCAGCTCTTCGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ELSSLFEGGKCILYQVPLGCRCV*GQLFGP Trigger: TGGTCCGAAGAGCTGCCCTCACACACAACGACAACC...TAAAGGTACTTGGTACAGTATGCATTTCCCACCTTCAAAAAGAGAAGACAATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
||
| CDS-3UTR TCA 90 bp | AGGGTGGGCCCAAACACGATCCCCAGATTTTCGGCATTCATTAAATTGTCCTTTGGAATGTGTGCACCTTaGAGTTGTGTGTCTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVGPNTIPRFSAFIKLSFGMCAP*SCVSSH Trigger: ATGAGAAGACACACAACTTCAAGGTGCACACATTCC...AAAGGACAATTTAATGAATGCCGAAAATCTGGGGATCGTGTTTGGGCCCACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGTGAGAAACGTTTTTATTCCACTAGCTCTATCAGCTCACTTCCCTGGTGGTCACCAGGTCGTGAATaGATTCGAACCTCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KCEKRFYSTSSISSLPWWSPGRE*IRTSSH Trigger: GTGAGAAGAGGTTCGAATCCATTCACGACCTGGTGA...CCACCAGGGAAGTGAGCTGATAGAGCTAGTGGAATAAAAACGTTTCTCACACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAATTCTGCCACTTGTTTGAATAAACAAATCAAGTGTGAGAAACGTTTTGGGGTCTCATCAGGGTaGGCCCAAACACGATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGNSATCLNKQIKCEKRFGVSSG*AQTRSP Trigger: TGGGGATCGTGTTTGGGCCCACCCTGATGAGACCCC...AAAACGTTTCTCACACTTGATTTGTTTATTCAAACAAGTGGCAGAATTTCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CCA 90 bp | GAATTGTCTTCTCTTTTTGAAGGTGGGAAATGCATACTGTACCAAGTACCTTTATGGTACCGCATGTCATaGAGGGTGGTGAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELSSLFEGGKCILYQVPLWYRMS*RVVRVL Trigger: CAGCACCCTCACCACCCTCCATGACATGCGGTACCA...TAAAGGTACTTGGTACAGTATGCATTTCCCACCTTCAAAAAGAGAAGACAATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
||
| CDS-3UTR TCA 90 bp | GGTCCAGGAAATTCTGCCACTTGTTTGAATAAACAAATCAAGTGTGAGAAACGTCCTGCTCCCGAGAGATaGTCCCATGAAACTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPGNSATCLNKQIKCEKRPAPER*SHETLF Trigger: GAAGAGAGTTTCATGGGATCATCTCTCGGGAGCAGG...ACGTTTCTCACACTTGATTTGTTTATTCAAACAAGTGGCAGAATTTCCTGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR TCA 90 bp | AAGAACAGAAGCCACAACAAACAAATCTGTACAGTCATGAGGGACAGTGACAGCGTGTCTTCTCATAGTTaGAGTGGTTGTCGTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KNRSHNKQICTVMRDSDSVSSHS*SGCRCV Trigger: CACACAACGACAACCACTTCAACTATGAGAAGACAC...GCTGTCACTGTCCCTCATGACTGTACAGATTTGTTTGTTGTGGCTTCTGTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
||
| CDS-3UTR CCA 90 bp | AAGTGTGAGAAACGTTTTTATTCCACTAGCTCTATCAGCTCACTTCCCTGGTGGTGTCTGGGTAGATGTTaGCAGAGATATCCGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KCEKRFYSTSSISSLPWWCLGRC*QRYPPF Trigger: AAAAGGCGGATATCTCTGCCAACATCTACCCAGACA...CCACCAGGGAAGTGAGCTGATAGAGCTAGTGGAATAAAAACGTTTCTCACACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAATTCTGCCACTTGTTTGAATAAACAAATCAAGTGTGAGAAACGTTTTCATTGGGGACGTGCTTaGAGCACTGTTTGTGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: PGNSATCLNKQIKCEKRFHWGRA*STVCVR Trigger: ACGTACACAAACAGTGCTCCAAGCACGTCCCCAATG...AAAACGTTTCTCACACTTGATTTGTTTATTCAAACAAGTGGCAGAATTTCCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CCA 90 bp | GAATTGTCTTCTCTTTTTGAAGGTGGGAAATGCATACTGTACCAAGTACCTTTAGCCTCTCATCCGCATTaGAGATTTTTGCTGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ELSSLFEGGKCILYQVPLASHPH*RFLLPL Trigger: TAGAGGCAGCAAAAATCTCCAATGCGGATGAGAGGC...TAAAGGTACTTGGTACAGTATGCATTTCCCACCTTCAAAAAGAGAAGACAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
||
| CDS-3UTR CCA 90 bp | GAATTGTCTTCTCTTTTTGAAGGTGGGAAATGCATACTGTACCAAGTACCTTTATTCCATATTGGAGGCTaGTATTCCTCAGCATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELSSLFEGGKCILYQVPLFHIGG*YSSASE Trigger: CTCTGATGCTGAGGAATACCAGCCTCCAATATGGAA...TAAAGGTACTTGGTACAGTATGCATTTCCCACCTTCAAAAAGAGAAGACAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAATTCTGCCACTTGTTTGAATAAACAAATCAAGTGTGAGAAACGTTTTGACGCTAGCTTTCCTTaGTTCGTTTTTAGACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGNSATCLNKQIKCEKRFDASFP*FVFRPA Trigger: AGCAGGTCTAAAAACGAATCAAGGAAAGCTAGCGTC...AAAACGTTTCTCACACTTGATTTGTTTATTCAAACAAGTGGCAGAATTTCCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAATTCTGCCACTTGTTTGAATAAACAAATCAAGTGTGAGAAACGTTTTGTGTCTTCTCATAGTTaGAGTGGTTGTCGTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGNSATCLNKQIKCEKRFVSSHS*SGCRCV Trigger: CACACAACGACAACCACTTCAACTATGAGAAGACAC...AAAACGTTTCTCACACTTGATTTGTTTATTCAAACAAGTGGCAGAATTTCCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CAA 90 bp | CTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGTCTGGCTGGCAGTCATaGGGGACGTGCTTGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LTWRRETQSPTLRSTVVQSGWQS*GTCLEH Trigger: GTGCTCCAAGCACGTCCCCAATGACTGCCAGCCAGA...CTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CAA 90 bp | CGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATCTGGCTGGCAGTCATaGGGGACGTGCTTGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGGGRHSPQLCDPLWSRKSGWQS*GTCLEH Trigger: GTGCTCCAAGCACGTCCCCAATGACTGCCAGCCAGA...TTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CAA 90 bp | CTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGCCTTTGAGCCCCACCTaGACCCCAAATGCAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTWRRETQSPTLRSTVVQPLSPT*TPNAMA Trigger: GGCCATTGCATTTGGGGTCAAGGTGGGGCTCAAAGG...CTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
||
| CDS-3UTR CAA 90 bp | CACGATCAGCTTTTGGTACCGCATGTCATGGAGGGTGGTGAGGGTGCTGTCCTCTCTGGCTGGCAGTCATaGGGGACGTGCTTGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HDQLLVPHVMEGGEGAVLSGWQS*GTCLEH Trigger: GTGCTCCAAGCACGTCCCCAATGACTGCCAGCCAGA...GAGGACAGCACCCTCACCACCCTCCATGACATGCGGTACCAAAAGCTGATCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACAATGGCCAGCAGCTCTaGGCGCTTCCTGCTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRHSPQLCDPLWSRKFCHNGQQL*ALPAGL Trigger: AAGCCCAGCAGGAAGCGCCAAGAGCTGCTGGCCATT...GTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067741.10 |
||
| CDS GCA 90 bp | AGGAGACCAGAGAAAGCCACCTTTGAGCCCCACCTTGACCCCAAATaGAATGGCCAGCAGCTCTTGGCGCTTCCTGCTGGGCTTGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: RRPEKATFEPHLDPK*NGQQLLALPAGLGL Trigger: AAGTCCAAGCCCAGCAGGAAGCGCCAAGAGCTGCTGGCCATTGCATTTGGGGTCAAGGTGGGGCTCAAAGGTGGCTTTCTCTGGTCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000067741.10 ENSMUST00000203091.3 ENSMUST00000203941.3 ENSMUST00000204115.3 ENSMUST00000204746.2 ENSMUST00000204921.3 |
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| CDS-3UTR CAA 90 bp | CTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGTTGAAGTGGTTGTCGTaGTGTGTGAGGGCAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTWRRETQSPTLRSTVVQLKWLS*CVRAAL Trigger: AAGAGCTGCCCTCACACACAACGACAACCACTTCAA...CTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CAA 90 bp | CTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGCTCGTAGATGGGATTaGTGGTCATTTTCGCGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LTWRRETQSPTLRSTVVQARRWD*WSFSRC Trigger: ACATCGCGAAAATGACCACAAATCCCATCTACGAGC...CTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR CAA 90 bp | TCCTACCCTCACCCTTGCTCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTTTGAAGTGGTTGTCGTaGTGTGTGAGGGCAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SYPHPCSHVEAGDTVPNSLKWLS*CVRAAL Trigger: AAGAGCTGCCCTCACACACAACGACAACCACTTCAA...AGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGAGCAAGGGTGAGGGTAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
||
| CDS-3UTR CAA 90 bp | GGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTCATTGGGGACGTGCTaGGAGCACTGTTTGTGTACG | + |
|
Preference number: 5 (lower is better) Translates to: GGGRHSPQLCDPLWSRKFSLGTC*EHCLCT Trigger: CGTACACAAACAGTGCTCCAAGCACGTCCCCAATGA...GAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS TCA 90 bp | GTTGAAGTGGTTGTCGTTGTGTGTGAGGGCAGCTCTTCGGACCAGTaGAGAGATCTTCTCCACTGGCGTGTGCTCCTCGTTGCTGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: VEVVVVVCEGSSSDQ*RDLLHWRVLLVADA Trigger: AGCGTCAGCAACGAGGAGCACACGCCAGTGGAGAAGATCTCTTCACTGGTCCGAAGAGCTGCCCTCACACACAACGACAACCACTTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR CAA 90 bp | TCCCGTCGTGGAAGAGCCGGTAGTTTAAGGTCTGGTTCCCAAACCTCAGTGCCAGGGACGAGGTGCCTCTaGCTGCAGCTGATACAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SRRGRAGSLRSGSQTSVPGTRCL*LQLIQV Trigger: TACTTGTATCAGCTGCAGCAAGAGGCACCTCGTCCC...TGGCACTGAGGTTTGGGAACCAGACCTTAAACTACCGGCTCTTCCACGACGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133315.4 |
||
| CDS-3UTR CAA 90 bp | CACGATCAGCTTTTGGTACCGCATGTCATGGAGGGTGGTGAGGGTGCTGTCCTCTCATTGGGGACGTGCTaGGAGCACTGTTTGTGTACG | + |
|
Preference number: 5 (lower is better) Translates to: HDQLLVPHVMEGGEGAVLSLGTC*EHCLCT Trigger: CGTACACAAACAGTGCTCCAAGCACGTCCCCAATGA...GAGGACAGCACCCTCACCACCCTCCATGACATGCGGTACCAAAAGCTGATCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR CAA 90 bp | TCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAACTTTCTTGATCCTCTaGAGATCTGGCTGGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SHVEAGDTVPNSAIHCGPTFLIL*RSGWQS Trigger: TGACTGCCAGCCAGATCTCAAGAGGATCAAGAAAGT...TGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CAA 90 bp | GAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTGGGACGAGGTGCCTCTaGCTGCAGCTGATACAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ETQSPTLRSTVVQEILPLGTRCL*LQLIQV Trigger: TACTTGTATCAGCTGCAGCAAGAGGCACCTCGTCCC...AAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR CAA 90 bp | CTGCACGATCAGCTTTTGGTACCGCATGTCATGGAGGGTGGTGAGGGTGCTGTCTTGAAGTGGTTGTCGTaGTGTGTGAGGGCAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LHDQLLVPHVMEGGEGAVLKWLS*CVRAAL Trigger: AAGAGCTGCCCTCACACACAACGACAACCACTTCAA...GACAGCACCCTCACCACCCTCCATGACATGCGGTACCAAAAGCTGATCGTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR CAA 90 bp | CACGGCAAAAGACCCAAGGTAAGGGGTTTCCTACCCTCACCCTTGCTCTCACGTTCATTGGGGACGTGCTaGGAGCACTGTTTGTGTACG | + |
|
Preference number: 5 (lower is better) Translates to: HGKRPKVRGFLPSPLLSRSLGTC*EHCLCT Trigger: CGTACACAAACAGTGCTCCAAGCACGTCCCCAATGA...ACGTGAGAGCAAGGGTGAGGGTAGGAAACCCCTTACCTTGGGTCTTTTGCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
||
| CDS TCA 90 bp | AATGGAAACTGGCTAACGAGTGAGAAGGCAGCTCCCGGGGACAAATaGTCCTCTTGGGACGAGGTGCCTCTTGCTGCAGCTGATACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NGNWLTSEKAAPGDK*SSWDEVPLAAADTS Trigger: ACTTGTATCAGCTGCAGCAAGAGGCACCTCGTCCCAAGAGGATCATTTGTCCCCGGGAGCTGCCTTCTCACTCGTTAGCCAGTTTCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127323.3 |
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| CDS-3UTR CAA 90 bp | GGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACCGGAATGTGTGCACCTaGAAGTTGTGTGTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRHSPQLCDPLWSRKFCHRNVCT*KLCVFS Trigger: TGAGAAGACACACAACTTCAAGGTGCACACATTCCG...GTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CAA 90 bp | CTGCACGATCAGCTTTTGGTACCGCATGTCATGGAGGGTGGTGAGGGTGCTGTCCGGAATGTGTGCACCTaGAAGTTGTGTGTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LHDQLLVPHVMEGGEGAVRNVCT*KLCVFS Trigger: TGAGAAGACACACAACTTCAAGGTGCACACATTCCG...GACAGCACCCTCACCACCCTCCATGACATGCGGTACCAAAAGCTGATCGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR CAA 90 bp | TCTCACGTGGAGGCGGGAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCACTGACTTTAATCCTCTaGCTTCAATTTCCCGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: SHVEAGDTVPNSAIHCGPLTLIL*LQFPEY Trigger: GTATTCGGGAAATTGAAGCAAGAGGATTAAAGTCAG...TGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTCCCGCCTCCACGTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTGGGCCCAAACACGATCCCCAGATTTTCGGCATTCATTAAATTGTCCTTTAATGGCCAGCAGCTCTaGGCGCTTCCTGCTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RVGPNTIPRFSAFIKLSFNGQQL*ALPAGL Trigger: AAGCCCAGCAGGAAGCGCCAAGAGCTGCTGGCCATT...AAAGGACAATTTAATGAATGCCGAAAATCTGGGGATCGTGTTTGGGCCCACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR CAA 90 bp | ATCAGGGTGGGCCCAAACACGATCCCCAGATTTTCGGCATTCATTAAATTGTCCCCTTTGAGCCCCACCTaGACCCCAAATGCAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IRVGPNTIPRFSAFIKLSPLSPT*TPNAMA Trigger: GGCCATTGCATTTGGGGTCAAGGTGGGGCTCAAAGG...GGACAATTTAATGAATGCCGAAAATCTGGGGATCGTGTTTGGGCCCACCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS TCA 90 bp | CTTCTCCACTGGCGTGTGCTCCTCGTTGCTGACGCTAGCTTTCCTTaGTTCGTTTTTAGACCTGCTCAGCCTTCGGGACACTTTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLHWRVLLVADASFP*FVFRPAQPSGHFFS Trigger: AGAGAAAAAGTGTCCCGAAGGCTGAGCAGGTCTAAAAACGAATCAAGGAAAGCTAGCGTCAGCAACGAGGAGCACACGCCAGTGGAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR CAA 90 bp | ATCACTCTTCCAGCAAAACAGACATACATACGAGGCACGGCAAAAGACCCAAGGGGACAAATGATCCTCTaGGGACGAGGTGCCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ITLPAKQTYIRGTAKDPRGQMIL*GRGASC Trigger: GCAAGAGGCACCTCGTCCCAAGAGGATCATTTGTCC...CCTTGGGTCTTTTGCCGTGCCTCGTATGTATGTCTGTTTTGCTGGAAGAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR CAA 90 bp | GACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTGTACTTTCTTGATCCTCTaGAGATCTGGCTGGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DTVPNSAIHCGPGNSATCTFLIL*RSGWQS Trigger: TGACTGCCAGCCAGATCTCAAGAGGATCAAGAAAGT...ACAAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CAA 90 bp | CTGCACGATCAGCTTTTGGTACCGCATGTCATGGAGGGTGGTGAGGGTGCTGTCCTGACTTTAATCCTCTaGCTTCAATTTCCCGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: LHDQLLVPHVMEGGEGAVLTLIL*LQFPEY Trigger: GTATTCGGGAAATTGAAGCAAGAGGATTAAAGTCAG...GACAGCACCCTCACCACCCTCCATGACATGCGGTACCAAAAGCTGATCGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR CAA 90 bp | GAGACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTAGTATGATTTCCATATaGGAGGCTGGTATTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ETQSPTLRSTVVQEILPLSMISI*EAGIPQ Trigger: CTGAGGAATACCAGCCTCCAATATGGAAATCATACT...AAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
||
| CDS-3UTR CAA 90 bp | CAAAGTGCTTCCCGTCGTGGAAGAGCCGGTAGTTTAAGGTCTGGTTCCCAAACCAGTATGATTTCCATATaGGAGGCTGGTATTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QSASRRGRAGSLRSGSQTSMISI*EAGIPQ Trigger: CTGAGGAATACCAGCCTCCAATATGGAAATCATACT...GGTTTGGGAACCAGACCTTAAACTACCGGCTCTTCCACGACGGGAAGCACTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133315.4 |
||
| CDS GCA 90 bp | ACTTTCTTGATCCTCTTGAGATCTGGCTGGCAGTCATTGGGGACGTaGTTGGAGCACTGTTTGTGTACGTTTAACCCACAATCTGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: TFLILLRSGWQSLGT*LEHCLCTFNPQSEH Trigger: GTGTTCAGATTGTGGGTTAAACGTACACAAACAGTGCTCCAAGCACGTCCCCAATGACTGCCAGCCAGATCTCAAGAGGATCAAGAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 ENSMUST00000114402.9 ENSMUST00000146114.8 ENSMUST00000203091.3 ENSMUST00000204115.3 ENSMUST00000204921.3 |
||
| CDS-3UTR CAA 90 bp | ATCACTCTTCCAGCAAAACAGACATACATACGAGGCACGGCAAAAGACCCAAGGCGGAATGTGTGCACCTaGAAGTTGTGTGTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ITLPAKQTYIRGTAKDPRRNVCT*KLCVFS Trigger: TGAGAAGACACACAACTTCAAGGTGCACACATTCCG...CCTTGGGTCTTTTGCCGTGCCTCGTATGTATGTCTGTTTTGCTGGAAGAGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
||
| CDS-3UTR CAA 90 bp | ATCAGGGTGGGCCCAAACACGATCCCCAGATTTTCGGCATTCATTAAATTGTCCACTTTCTTGATCCTCTaGAGATCTGGCTGGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IRVGPNTIPRFSAFIKLSTFLIL*RSGWQS Trigger: TGACTGCCAGCCAGATCTCAAGAGGATCAAGAAAGT...GGACAATTTAATGAATGCCGAAAATCTGGGGATCGTGTTTGGGCCCACCCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203091.3 |
||
| CDS-3UTR CAA 90 bp | GACACAGTCCCCAACTCTGCGATCCACTGTGGTCCAGGAAATTCTGCCACTTGTCTGACTTTAATCCTCTaGCTTCAATTTCCCGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: DTVPNSAIHCGPGNSATCLTLIL*LQFPEY Trigger: GTATTCGGGAAATTGAAGCAAGAGGATTAAAGTCAG...ACAAGTGGCAGAATTTCCTGGACCACAGTGGATCGCAGAGTTGGGGACTGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CAA 90 bp | GAATTGTCTTCTCTTTTTGAAGGTGGGAAATGCATACTGTACCAAGTACCTTTATCTGGCTGGCAGTCATaGGGGACGTGCTTGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ELSSLFEGGKCILYQVPLSGWQS*GTCLEH Trigger: GTGCTCCAAGCACGTCCCCAATGACTGCCAGCCAGA...TAAAGGTACTTGGTACAGTATGCATTTCCCACCTTCAAAAAGAGAAGACAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 |
||
| CDS-3UTR CAA 90 bp | GGTCCAGGAAATTCTGCCACTTGTTTGAATAAACAAATCAAGTGTGAGAAACGTTCATTGGGGACGTGCTaGGAGCACTGTTTGTGTACG | + |
|
Preference number: 5 (lower is better) Translates to: GPGNSATCLNKQIKCEKRSLGTC*EHCLCT Trigger: CGTACACAAACAGTGCTCCAAGCACGTCCCCAATGA...ACGTTTCTCACACTTGATTTGTTTATTCAAACAAGTGGCAGAATTTCCTGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGTCCAGGAAATTCTGCCACTTGTTTGAATAAACAAATCAAGTGTGAGAAATTGAAGTGGTTGTCGTaGTGTGTGAGGGCAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CGPGNSATCLNKQIKCEKLKWLS*CVRAAL Trigger: AAGAGCTGCCCTCACACACAACGACAACCACTTCAA...TTTCTCACACTTGATTTGTTTATTCAAACAAGTGGCAGAATTTCCTGGACCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGTCCAGGAAATTCTGCCACTTGTTTGAATAAACAAATCAAGTGTGAGAAACGGAATGTGTGCACCTaGAAGTTGTGTGTCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: CGPGNSATCLNKQIKCEKRNVCT*KLCVFS Trigger: TGAGAAGACACACAACTTCAAGGTGCACACATTCCG...TTTCTCACACTTGATTTGTTTATTCAAACAAGTGGCAGAATTTCCTGGACCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR CAA 90 bp | TGTGGTCCAGGAAATTCTGCCACTTGTTTGAATAAACAAATCAAGTGTGAGAAAACTTTCTTGATCCTCTaGAGATCTGGCTGGCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: CGPGNSATCLNKQIKCEKTFLIL*RSGWQS Trigger: TGACTGCCAGCCAGATCTCAAGAGGATCAAGAAAGT...TTTCTCACACTTGATTTGTTTATTCAAACAAGTGGCAGAATTTCCTGGACCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS-3UTR CAA 90 bp | TGTGGTCCAGGAAATTCTGCCACTTGTTTGAATAAACAAATCAAGTGTGAGAAACTGACTTTAATCCTCTaGCTTCAATTTCCCGAATAC | + |
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Preference number: 5 (lower is better) Translates to: CGPGNSATCLNKQIKCEKLTLIL*LQFPEY Trigger: GTATTCGGGAAATTGAAGCAAGAGGATTAAAGTCAG...TTTCTCACACTTGATTTGTTTATTCAAACAAGTGGCAGAATTTCCTGGACCACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 |
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| CDS CAA 72 bp | AGAGGAGACCAGAGAAAGCCACCTTTGAGCCCCACCTaGACCCCAAATGCAATGGCCAGCAGCTCTTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RGDQRKPPLSPT*TPNAMASSSWR Trigger: GCGCCAAGAGCTGCTGGCCATTGCATTTGGGGTCAAGGTGGGGCTCAAAGGTGGCTTTCTCTGGTCTCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000067741.10 ENSMUST00000203091.3 ENSMUST00000203941.3 ENSMUST00000204115.3 ENSMUST00000204746.2 ENSMUST00000204921.3 |
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| CDS CAA 90 bp | AAGAGCTTGAGAGGAGACCAGAGAAAGCCACCTTTGAGCCCCACCTaGACCCCAAATGCAATGGCCAGCAGCTCTTGGCGCTTCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: KSLRGDQRKPPLSPT*TPNAMASSSWRFLL Trigger: CAGCAGGAAGCGCCAAGAGCTGCTGGCCATTGCATTTGGGGTCAAGGTGGGGCTCAAAGGTGGCTTTCTCTGGTCTCCTCTCAAGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000067741.10 ENSMUST00000203091.3 ENSMUST00000203941.3 ENSMUST00000204115.3 ENSMUST00000204746.2 ENSMUST00000204921.3 |
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| CDS TCA 72 bp | GTTGTCGTTGTGTGTGAGGGCAGCTCTTCGGACCAGTaGAGAGATCTTCTCCACTGGCGTGTGCTCCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: VVVVCEGSSSDQ*RDLLHWRVLLV Trigger: AACGAGGAGCACACGCCAGTGGAGAAGATCTCTTCACTGGTCCGAAGAGCTGCCCTCACACACAACGACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
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| CDS CAA 72 bp | GCAAAGAGCTTGAGAGGAGACCAGAGAAAGCCACCTTaGAGCCCCACCTTGACCCCAAATGCAATGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: AKSLRGDQRKPP*SPTLTPNAMAS Trigger: GCTGGCCATTGCATTTGGGGTCAAGGTGGGGCTCAAAGGTGGCTTTCTCTGGTCTCCTCTCAAGCTCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000067741.10 ENSMUST00000203091.3 ENSMUST00000203941.3 ENSMUST00000204115.3 ENSMUST00000204746.2 ENSMUST00000204921.3 |
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| CDS CAA 90 bp | GCAGCTCTTCGGACCAGTGAAGAGATCTGTGAACAGGCAAAGAGCTaGAGAGGAGACCAGAGAAAGCCACCTTTGAGCCCCACCTTGACC | + |
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Preference number: 6 (lower is better) Translates to: AALRTSEEICEQAKS*RGDQRKPPLSPTLT Trigger: GGTCAAGGTGGGGCTCAAAGGTGGCTTTCTCTGGTCTCCTCTCAAGCTCTTTGCCTGTTCACAGATCTCTTCACTGGTCCGAAGAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067741.10 ENSMUST00000203091.3 ENSMUST00000203941.3 ENSMUST00000204115.3 ENSMUST00000204746.2 ENSMUST00000204921.3 |
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| CDS TCA 72 bp | TGGCGTGTGCTCCTCGTTGCTGACGCTAGCTTTCCTTaGTTCGTTTTTAGACCTGCTCAGCCTTCGGGACAC | + |
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Preference number: 6 (lower is better) Translates to: WRVLLVADASFP*FVFRPAQPSGH Trigger: GTGTCCCGAAGGCTGAGCAGGTCTAAAAACGAATCAAGGAAAGCTAGCGTCAGCAACGAGGAGCACACGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
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| CDS CAA 72 bp | GTGGTGAGGTCACAGCAGTACACTTTCTTGATCCTCTaGAGATCTGGCTGGCAGTCATTGGGGACGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: VVRSQQYTFLIL*RSGWQSLGTCL Trigger: CAAGCACGTCCCCAATGACTGCCAGCCAGATCTCAAGAGGATCAAGAAAGTGTACTGCTGTGACCTCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 ENSMUST00000114402.9 ENSMUST00000146114.8 ENSMUST00000203091.3 ENSMUST00000204115.3 ENSMUST00000204921.3 |
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| CDS CAA 72 bp | GCAATGGCCAGCAGCTCTTGGCGCTTCCTGCTGGGCTaGGACTTCCGAACCATAGCACATTTTCTCTCATTT | + |
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Preference number: 6 (lower is better) Translates to: AMASSSWRFLLG*DFRTIAHFLSF Trigger: AAATGAGAGAAAATGTGCTATGGTTCGGAAGTCCAAGCCCAGCAGGAAGCGCCAAGAGCTGCTGGCCATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067741.10 ENSMUST00000203091.3 ENSMUST00000203941.3 ENSMUST00000204115.3 ENSMUST00000204746.2 ENSMUST00000204921.3 |
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| CDS CAA 90 bp | CTTCGGACCAGTGAAGAGATCTTCTCCACTGGCGTGTGCTCCTCGTaGCTGACGCTAGCTTTCCTTGATTCGTTTTTAGACCTGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LRTSEEIFSTGVCSS*LTLAFLDSFLDLLS Trigger: GCTGAGCAGGTCTAAAAACGAATCAAGGAAAGCTAGCGTCAGCAACGAGGAGCACACGCCAGTGGAGAAGATCTCTTCACTGGTCCGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046856.14 |
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| CDS CAA 90 bp | TTCTTGATCCTCTTGAGATCTGGCTGGCAGTCATTGGGGACGTGCTaGGAGCACTGTTTGTGTACGTTTAACCCACAATCTGAACACCGG | + |
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Preference number: 6 (lower is better) Translates to: FLILLRSGWQSLGTC*EHCLCTFNPQSEHR Trigger: CCGGTGTTCAGATTGTGGGTTAAACGTACACAAACAGTGCTCCAAGCACGTCCCCAATGACTGCCAGCCAGATCTCAAGAGGATCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 ENSMUST00000114402.9 ENSMUST00000146114.8 ENSMUST00000203091.3 ENSMUST00000204115.3 ENSMUST00000204921.3 |
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| CDS GCA 72 bp | ATCCTCTTGAGATCTGGCTGGCAGTCATTGGGGACGTaGTTGGAGCACTGTTTGTGTACGTTTAACCCACAA | + |
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Preference number: 6 (lower is better) Translates to: ILLRSGWQSLGT*LEHCLCTFNPQ Trigger: TTGTGGGTTAAACGTACACAAACAGTGCTCCAAGCACGTCCCCAATGACTGCCAGCCAGATCTCAAGAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 ENSMUST00000114402.9 ENSMUST00000146114.8 ENSMUST00000203091.3 ENSMUST00000204115.3 ENSMUST00000204921.3 |
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| CDS CAA 72 bp | CTCTTGAGATCTGGCTGGCAGTCATTGGGGACGTGCTaGGAGCACTGTTTGTGTACGTTTAACCCACAATCT | + |
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Preference number: 6 (lower is better) Translates to: LLRSGWQSLGTC*EHCLCTFNPQS Trigger: AGATTGTGGGTTAAACGTACACAAACAGTGCTCCAAGCACGTCCCCAATGACTGCCAGCCAGATCTCAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000046856.14 ENSMUST00000067741.10 ENSMUST00000114401.8 ENSMUST00000114402.9 ENSMUST00000146114.8 ENSMUST00000203091.3 ENSMUST00000204115.3 ENSMUST00000204921.3 |
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| CDS CAA 72 bp | AGGACCTCATGGACAGCTTCCAGCCTCTCATCCGCATaGGAGATTTCTCTGTCAAACGCCATCTTGACATCT | + |
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Preference number: 6 (lower is better) Translates to: RTSWTASSLSSA*EISLSNAILTS Trigger: AGATGTCAAGATGGCGTTTGACAGAGAAATCTCCAATGCGGATGAGAGGCTGGAAGCTGTCCATGAGGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203941.3 ENSMUST00000204921.3 |
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| CDS CAA 72 bp | CCTCTTGCTGCAGCTGATACAAGTATGATTTCCATATaGGAGGCTGGTATTCCTCAGCATCAGAGGACACGG | + |
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Preference number: 6 (lower is better) Translates to: PLAAADTSMISI*EAGIPQHQRTR Trigger: CCGTGTCCTCTGATGCTGAGGAATACCAGCCTCCAATATGGAAATCATACTTGTATCAGCTGCAGCAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046856.14 ENSMUST00000127323.3 ENSMUST00000133315.4 |
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