Pregenerated sensors for CHN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056486Ensembl transcript IDs: ENSMUST00000070579.7, ENSMUST00000102677.11, ENSMUST00000112024.10, ENSMUST00000124450.2, ENSMUST00000139252.2, ENSMUST00000166199.9, ENSMUST00000180045.8, ENSMUST00000229731.2
Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGAGCGTCTCGCAGTGGGCAGGCGGCAGCGATCTCAGTGCTTCGTaGAGGGTCTCCAATTGCTCGTCAGGGTCCATAATTTTGGCAGAC | + |
|
Preference number: 1 (lower is better) Translates to: RSVSQWAGGSDLSAS*RVSNCSSGSIILAD Trigger: GTCTGCCAAAATTATGGACCCTGACGAGCAATTGGAGACCCTTCACGAAGCACTGAGATCGCTGCCGCCTGCCCACTGCGAGACGCTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124450.2 |
||
| 3UTR CCA 90 bp | CTCAAAGTCACATGGCTGACAGGTGGCAGTCCCAAACGCAGACCTTaGGCTCTCTGCCTGACGAGCTGCCTTGTAACGCCTCTCACCCGT | + |
|
Preference number: 1 (lower is better) Translates to: LKVTWLTGGSPKRRP*ALCLTSCLVTPLTR Trigger: ACGGGTGAGAGGCGTTACAAGGCAGCTCGTCAGGCAGAGAGCCCAAGGTCTGCGTTTGGGACTGCCACCTGTCAGCCATGTGACTTTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 90 bp | GTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTaGCAGGTGTGCAGAGCCCAAGCAGTTAGCACTCCTCACATGAAG | + |
|
Preference number: 1 (lower is better) Translates to: VSWHPTHDPGCSRQA*QVCRAQAVSTPHMK Trigger: CTTCATGTGAGGAGTGCTAACTGCTTGGGCTCTGCACACCTGCCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR GCA 90 bp | CATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGCAGGTGTaGAGAGCCCAAGCAGTTAGCACTCCTCACATGAAGCTAGAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: HPTHDPGCSRQAWQV*RAQAVSTPHMKLEE Trigger: TTCCTCTAGCTTCATGTGAGGAGTGCTAACTGCTTGGGCTCTGCACACCTGCCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR GCA 90 bp | GAAGCATGCTGGGTGACAACCACAGACAACCCAGGACAGAGGTGGTaGAGGCACAAGTCTGTGATTCCTCAATGTGGGGTTTCCTCACCA | + |
|
Preference number: 1 (lower is better) Translates to: EACWVTTTDNPGQRW*RHKSVIPQCGVSSP Trigger: TGGTGAGGAAACCCCACATTGAGGAATCACAGACTTGTGCCTGCACCACCTCTGTCCTGGGTTGTCTGTGGTTGTCACCCAGCATGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 90 bp | GGACCCCAAAAGCAAAGTCATGACAGTTTACTCTGGGAAGCATGCTaGGTGACAACCACAGACAACCCAGGACAGAGGTGGTGCAGGCAC | + |
|
Preference number: 1 (lower is better) Translates to: GPQKQSHDSLLWEAC*VTTTDNPGQRWCRH Trigger: GTGCCTGCACCACCTCTGTCCTGGGTTGTCTGTGGTTGTCACCCAGCATGCTTCCCAGAGTAAACTGTCATGACTTTGCTTTTGGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR GCA 90 bp | CATGGACCCCAAAAGCAAAGTCATGACAGTTTACTCTGGGAAGCATaGTGGGTGACAACCACAGACAACCCAGGACAGAGGTGGTGCAGG | + |
|
Preference number: 1 (lower is better) Translates to: HGPQKQSHDSLLWEA*WVTTTDNPGQRWCR Trigger: CCTGCACCACCTCTGTCCTGGGTTGTCTGTGGTTGTCACCCAGCATGCTTCCCAGAGTAAACTGTCATGACTTTGCTTTTGGGGTCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 90 bp | CCCAAAAGCAAAGTCATGACAGTTTACTCTGGGAAGCATGCTGGGTaGCAACCACAGACAACCCAGGACAGAGGTGGTGCAGGCACAAGT | + |
|
Preference number: 1 (lower is better) Translates to: PKSKVMTVYSGKHAG*QPQTTQDRGGAGTS Trigger: ACTTGTGCCTGCACCACCTCTGTCCTGGGTTGTCTGTGGTTGTCACCCAGCATGCTTCCCAGAGTAAACTGTCATGACTTTGCTTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 90 bp | GCTGGAAAGGAACCGTTGTGGAGTTGGCATATGGTATGGGGATGGTaGTGTAACAGCCAGGGCACTGCTTATGTGTGTGTGTGTGCAAGC | + |
|
Preference number: 1 (lower is better) Translates to: AGKEPLWSWHMVWGW*CNSQGTAYVCVCAS Trigger: GCTTGCACACACACACACATAAGCAGTGCCCTGGCTGTTACATCACCATCCCCATACCATATGCCAACTCCACAACGGTTCCTTTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 90 bp | ACAGTCCAAGAGACAGAACAAAATAGGCTTCTGCTCAAAGTCACATaGCTGACAGGTGGCAGTCCCAAACGCAGACCTTGGGCTCTCTGC | + |
|
Preference number: 1 (lower is better) Translates to: TVQETEQNRLLLKVT*LTGGSPKRRPWALC Trigger: GCAGAGAGCCCAAGGTCTGCGTTTGGGACTGCCACCTGTCAGCCATGTGACTTTGAGCAGAAGCCTATTTTGTTCTGTCTCTTGGACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 90 bp | AACCAATGGCATGGACCCCAAAAGCAAAGTCATGACAGTTTACTCTaGGAAGCATGCTGGGTGACAACCACAGACAACCCAGGACAGAGG | + |
|
Preference number: 1 (lower is better) Translates to: NQWHGPQKQSHDSLL*EACWVTTTDNPGQR Trigger: CCTCTGTCCTGGGTTGTCTGTGGTTGTCACCCAGCATGCTTCCCAGAGTAAACTGTCATGACTTTGCTTTTGGGGTCCATGCCATTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 90 bp | AGGAGGAGGAAGAAGCTGGAAAGGAACCGTTGTGGAGTTGGCATATaGTATGGGGATGGTGATGTAACAGCCAGGGCACTGCTTATGTGT | + |
|
Preference number: 1 (lower is better) Translates to: RRRKKLERNRCGVGI*YGDGDVTARALLMC Trigger: ACACATAAGCAGTGCCCTGGCTGTTACATCACCATCCCCATACCATATGCCAACTCCACAACGGTTCCTTTCCAGCTTCTTCCTCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 90 bp | GATGGAGTATCCCTGAATATCAATACTTTCCTTCAATGTAAACAGTaGGAAAGCAAACCCACCACTTACCAGCTGCCCACTACAGCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: DGVSLNINTFLQCKQ*ESKPTTYQLPTTAW Trigger: CCAGGCTGTAGTGGGCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTATTGATATTCAGGGATACTCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 90 bp | ATTTCATCTTCACCTTTTATTTTGAGCCACTTTCCTGAAGTTGCCTaGGTTGGTCTTGAACCCTTGGATTCAAGTGCTCTTTCTCCTTCA | + |
|
Preference number: 1 (lower is better) Translates to: ISSSPFILSHFPEVA*VGLEPLDSSALSPS Trigger: TGAAGGAGAAAGAGCACTTGAATCCAAGGGTTCAAGACCAACCCAGGCAACTTCAGGAAAGTGGCTCAAAATAAAAGGTGAAGATGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 90 bp | GCATTCTGTTTGATTCTTAGTGTGGTGAAACTTTTCACAGGACATTaGTTAAGACGACAGCTAGATGGAGTATCCCTGAATATCAATACT | + |
|
Preference number: 1 (lower is better) Translates to: AFCLILSVVKLFTGH*LRRQLDGVSLNINT Trigger: AGTATTGATATTCAGGGATACTCCATCTAGCTGTCGTCTTAACCAATGTCCTGTGAAAAGTTTCACCACACTAAGAATCAAACAGAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CAA 90 bp | GCTCAAAGTCACATGGCTGACAGGTGGCAGTCCCAAACGCAGACCTaGGGCTCTCTGCCTGACGAGCTGCCTTGTAACGCCTCTCACCCG | + |
|
Preference number: 2 (lower is better) Translates to: AQSHMADRWQSQTQT*GSLPDELPCNASHP Trigger: CGGGTGAGAGGCGTTACAAGGCAGCTCGTCAGGCAGAGAGCCCAAGGTCTGCGTTTGGGACTGCCACCTGTCAGCCATGTGACTTTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGGGTCGAGCTCTGGGGATCTCATGAGGGTTGGTCCAAACACGATCCCAAGGGCTGGCTCTCACGGATaGGGTAGCTCCCCTCAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: MGSSSGDLMRVGPNTIPRAGSHG*GSSPQP Trigger: TGGCTGAGGGGAGCTACCTCATCCGTGAGAGCCAGC...CCTTGGGATCGTGTTTGGACCAACCCTCATGAGATCCCCAGAGCTCGACCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124450.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGGGGAAGCATGCTGGGTaGCAACCACAGACAACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWGKHAG*QPQTTQ Trigger: CTGGGTTGTCTGTGGTTGTCACCCAGCATGCTTCCC...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGAAGGGTCACTCTCTTGAGATGCGCCATGAGGTACCGGAGCGTCTCGCAGTGCAAAGTGTACGTTCCTaGCTGCCGCTGGCTCTCACG | + |
|
Preference number: 2 (lower is better) Translates to: MKGHSLEMRHEVPERLAVQSVRS*LPLALT Trigger: CGTGAGAGCCAGCGGCAGCCAGGAACGTACACTTTG...CACTGCGAGACGCTCCGGTACCTCATGGCGCATCTCAAGAGAGTGACCCTTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124450.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGGAACCGTTGTGGAGTTaGCATATGGTATGGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWEPLWS*HMVWGW Trigger: CCATCCCCATACCATATGCCAACTCCACAACGGTTC...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR GCA 90 bp | GAACTTGGGGTAGGCATCGTATGTGATGAGAGGAATTGGCAGATCCCTGAAGTAGTGTACGTTCCTGGCTaGCGCTGGCTCTCACGGATG | + |
|
Preference number: 2 (lower is better) Translates to: ELGVGIVCDERNWQIPEVVYVPG*RWLSRM Trigger: CATCCGTGAGAGCCAGCGGCAGCCAGGAACGTACAC...TACTTCAGGGATCTGCCAATTCCTCTCATCACATACGATGCCTACCCCAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124450.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGAGCATCAGAAACCAATaGCATGGACCCCAAAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWSIRNQ*HGPQKQ Trigger: TTGCTTTTGGGGTCCATGCCATTGGTTTCTGATGCT...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGGGTCGAGCTCTGGGGATCTCATGAGGGTTGGTCCAAACACGATCCCAAGGAGATTCTCCTTCTCATaGAGGGTCACTCTCTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: MGSSSGDLMRVGPNTIPRRFSFS*RVTLLR Trigger: TCTCAAGAGAGTGACCCTTCATGAGAAGGAGAATCT...CCTTGGGATCGTGTTTGGACCAACCCTCATGAGATCCCCAGAGCTCGACCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124450.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGGTCACAGCTGTACACCTTCTTCACGTGCTTCAGATCTGGCTTACAGTCAGCACATTTCACTCCCTaGGCAATGAGGCCCCACATG | + |
|
Preference number: 2 (lower is better) Translates to: VRSQLYTFFTCFRSGLQSAHFTP*AMRPHM Trigger: CATGTGGGGCCTCATTGCTCAGGGAGTGAAATGTGC...TGACTGTAAGCCAGATCTGAAGCACGTGAAGAAGGTGTACAGCTGTGACCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139252.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGAAGGGTCACTCTCTTGAGATGCGCCATGAGGTACCGGAGCGTCTCGCAGTGTGTGATGAGAGGAATTaGCAGATCCCTGAAGTACAG | + |
|
Preference number: 2 (lower is better) Translates to: MKGHSLEMRHEVPERLAVCDERN*QIPEVQ Trigger: CTGTACTTCAGGGATCTGCCAATTCCTCTCATCACA...CACTGCGAGACGCTCCGGTACCTCATGGCGCATCTCAAGAGAGTGACCCTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124450.2 |
||
| 3UTR-3UTR TCA 90 bp | TTACCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCGGGAAGCATGCTGGGTaGCAACCACAGACAACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LPAAHYSLESGVRHVLYFGKHAG*QPQTTQ Trigger: CTGGGTTGTCTGTGGTTGTCACCCAGCATGCTTCCC...GAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCCATCTCACCCGTGTGTCATaGCATCCCACACATGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: PAAHYSLESGVRHVLYFHLTRVS*HPTHDP Trigger: AGGGTCATGTGTGGGATGCCATGACACACGGGTGAG...ATGGAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCGGGAAGCATGCTGGGTaGCAACCACAGACAACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: ILSFNVNSEKANPPLTSCGKHAG*QPQTTQ Trigger: CTGGGTTGTCTGTGGTTGTCACCCAGCATGCTTCCC...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCCCACTATCAAAGTCACATGGCTaGCAGGTGGCAGTCCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SFNVNSEKANPPLTSCPLSKSHG*QVAVPN Trigger: GTTTGGGACTGCCACCTGTCAGCCATGTGACTTTGA...TAGTGGGCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | TTACCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCTCAAAGTCACATGGCTaGCAGGTGGCAGTCCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LPAAHYSLESGVRHVLYFSKSHG*QVAVPN Trigger: GTTTGGGACTGCCACCTGTCAGCCATGTGACTTTGA...GAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGGAAAATGTTGTGTGGTaGATTTTTATTGGTAGCGTA | + |
|
Preference number: 2 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWENVVW*IFIGSV Trigger: TACGCTACCAATAAAAATGCACCACACAACATTTTC...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR GCA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCCAAGCCTGGCAGGTGTaGAGAGCCCAAGCAGTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: ILSFNVNSEKANPPLTSCQAWQV*RAQAVS Trigger: GCTAACTGCTTGGGCTCTGCACACCTGCCAGGCTTG...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCCTCTGGGAAGCATGCTaGGTGACAACCACAGACAAC | + |
|
Preference number: 2 (lower is better) Translates to: LPAAHYSLESGVRHVLYFLWEAC*VTTTDN Trigger: GTTGTCTGTGGTTGTCACCCAGCATGCTTCCCAGAG...GAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGAGAAGTTTGAATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTGGGTATGGCATCCCACACATaGCCCTGGCTGTTCCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: TEKFESYLLHSKSYARLGMASHT*PWLFQT Trigger: TGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCAT...ACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCCCACTATTTGAGCCACTTTCCTaGAGTTGCCTGGGTTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SFNVNSEKANPPLTSCPLFEPLS*SCLGWS Trigger: AGACCAACCCAGGCAACTTCAGGAAAGTGGCTCAAA...TAGTGGGCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGCATGGACCCCAAAAGCAAAGTCATGACAGTTTACTCTGGGAAGCATGCTGGACCAGAAAGCGTGTGTaGACTGTTTTACAAGGACAG | + |
|
Preference number: 2 (lower is better) Translates to: WHGPQKQSHDSLLWEACWTRKRV*TVLQGQ Trigger: CTGTCCTTGTAAAACAGTGCACACACGCTTTCTGGT...CCAGCATGCTTCCCAGAGTAAACTGTCATGACTTTGCTTTTGGGGTCCATGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCCATAACTCTCTGGGAAGCATGCTaGGTGACAACCACAGACAAC | + |
|
Preference number: 2 (lower is better) Translates to: LPTTAWKVELDMFCISITLWEAC*VTTTDN Trigger: GTTGTCTGTGGTTGTCACCCAGCATGCTTCCCAGAG...AGTTATGGAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCGAACCGTTGTGGAGTTaGCATATGGTATGGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: LPAAHYSLESGVRHVLYFEPLWS*HMVWGW Trigger: CCATCCCCATACCATATGCCAACTCCACAACGGTTC...GAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCTGTTCCAGACAAGCCTaGCAGGTGTGCAGAGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: ILSFNVNSEKANPPLTSCCSRQA*QVCRAQ Trigger: TTGGGCTCTGCACACCTGCCAGGCTTGTCTGGAACA...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGAGAAGTTTGAATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTGGGTCTCACCCGTGTGTCATaGCATCCCACACATGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: TEKFESYLLHSKSYARLGLTRVS*HPTHDP Trigger: AGGGTCATGTGTGGGATGCCATGACACACGGGTGAG...ACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTACCACTGCTCAAAGTCACATaGCTGACAGGTGGCAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SLLSLLALLLVVLVVLVPLLKVT*LTGGSP Trigger: GGGACTGCCACCTGTCAGCCATGTGACTTTGAGCAG...TGGTACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCATGGTATGGGGATGGTaGTGTAACAGCCAGGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: ILSFNVNSEKANPPLTSCMVWGW*CNSQGT Trigger: AGTGCCCTGGCTGTTACATCACCATCCCCATACCAT...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | TCACGAGCGTTGTCAGGTCACAGCTGTACACCTTCTTCACGTGCTTCAGATCTGGGAACGTATGCACCTTaGAATTGTGAACCTTTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: SRALSGHSCTPSSRASDLGTYAP*NCEPFH Trigger: ATGAAAAGGTTCACAATTTCAAGGTGCATACGTTCC...CAGATCTGAAGCACGTGAAGAAGGTGTACAGCTGTGACCTGACAACGCTCGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139252.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACACCCAGGGTTACCGGGACCAGAAAGCGTGTGTGCACTGTTTTACAAGGACTCCTTCATTTTAATCTaGGTATTTGGCCAAACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: RHPGLPGPESVCALFYKDSFILI*VFGQTS Trigger: AGAGGTTTGGCCAAATACCCAGATTAAAATGAAGGA...GTCCTTGTAAAACAGTGCACACACGCTTTCTGGTCCCGGTAACCCTGGGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGAGAAGTTTGAATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTGGGTGGAGGAGGAAGAAGCTaGAAAGGAACCGTTGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: TEKFESYLLHSKSYARLGGGGRS*KGTVVE Trigger: CTCCACAACGGTTCCTTTCCAGCTTCTTCCTCCTCC...ACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGACAGTGGAGGATCCGTCCATACATTAAGCCATGGCAACCACATGTAATATTTCCTGAAGTTGCCTaGGTTGGTCTTGAACCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: ARQWRIRPYIKPWQPHVIFPEVA*VGLEPL Trigger: CAAGGGTTCAAGACCAACCCAGGCAACTTCAGGAAA...TATTACATGTGGTTGCCATGGCTTAATGTATGGACGGATCCTCCACTGTCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTTCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTATGGCATCCCACACATaGCCCTGGCTGTTCCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: FFSSVPSRPPFSSISSTSMASHT*PWLFQT Trigger: TGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCAT...ACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTACCATTTGAGCCACTTTCCTaGAGTTGCCTGGGTTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLLSLLALLLVVLVVLVPFEPLS*SCLGWS Trigger: AGACCAACCCAGGCAACTTCAGGAAAGTGGCTCAAA...TGGTACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCCCACTAACCAGAAAGCGTGTGTaGACTGTTTTACAAGGACAG | + |
|
Preference number: 2 (lower is better) Translates to: SFNVNSEKANPPLTSCPLTRKRV*TVLQGQ Trigger: CTGTCCTTGTAAAACAGTGCACACACGCTTTCTGGT...TAGTGGGCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCAGCATCAGAAACCAATaGCATGGACCCCAAAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LPAAHYSLESGVRHVLYFSIRNQ*HGPQKQ Trigger: TTGCTTTTGGGGTCCATGCCATTGGTTTCTGATGCT...GAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCGAACCGTTGTGGAGTTaGCATATGGTATGGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: ILSFNVNSEKANPPLTSCEPLWS*HMVWGW Trigger: CCATCCCCATACCATATGCCAACTCCACAACGGTTC...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTTCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTATGGTATGGGGATGGTaGTGTAACAGCCAGGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: FFSSVPSRPPFSSISSTSMVWGW*CNSQGT Trigger: AGTGCCCTGGCTGTTACATCACCATCCCCATACCAT...ACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCCATCTTCACCTTTTATTTTaGGCCACTTTCCTGAAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: PAAHYSLESGVRHVLYFHLHLLF*ATFLKL Trigger: CAACTTCAGGAAAGTGGCTCAAAATAAAAGGTGAAG...ATGGAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAAGACAGTGGAGGATCCGTCCATACATTAAGCCATGGCAACCACATGTAATACTTCAATGTAAACAGTaGGAAAGCAAACCCACCACT | + |
|
Preference number: 2 (lower is better) Translates to: ARQWRIRPYIKPWQPHVILQCKQ*ESKPTT Trigger: AGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAG...TATTACATGTGGTTGCCATGGCTTAATGTATGGACGGATCCTCCACTGTCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGGAACATGTCAAATGACACACAGGATATAATTGGCAAATGCAATAATTGGTCAAAGTCACATGGCTaGCAGGTGGCAGTCCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: QRNMSNDTQDIIGKCNNWSKSHG*QVAVPN Trigger: GTTTGGGACTGCCACCTGTCAGCCATGTGACTTTGA...CCAATTATTGCATTTGCCAATTATATCCTGTGTGTCATTTGACATGTTCCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTTCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTTTTGAGCCACTTTCCTaGAGTTGCCTGGGTTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: FFSSVPSRPPFSSISSTSFEPLS*SCLGWS Trigger: AGACCAACCCAGGCAACTTCAGGAAAGTGGCTCAAA...ACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | TTACCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCCTTCACCTTTTATTTTaGGCCACTTTCCTGAAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LPAAHYSLESGVRHVLYFLHLLF*ATFLKL Trigger: CAACTTCAGGAAAGTGGCTCAAAATAAAAGGTGAAG...GAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | GAACTTGGGGTAGGCATCGTATGTGATGAGAGGAATTGGCAGATCCCTGAAGTATATCAAAAGCCATCTTaGCATCTTCAAAGCGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ELGVGIVCDERNWQIPEVYQKPS*HLQSVS Trigger: AGAAACGCTTTGAAGATGTCAAGATGGCTTTTGATA...TACTTCAGGGATCTGCCAATTCCTCTCATCACATACGATGCCTACCCCAAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124450.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTACCAATTCTTCCTCCCCAGTaGTGGGATTACAGCACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SLLSLLALLLVVLVVLVPILPPQ*WDYSTF Trigger: AAAAGTGCTGTAATCCCAGCACTGGGGAGGAAGAAT...TGGTACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR GCA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCATTCTTCCTCCCCAGTaGTGGGATTACAGCACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: ILSFNVNSEKANPPLTSCILPPQ*WDYSTF Trigger: AAAAGTGCTGTAATCCCAGCACTGGGGAGGAAGAAT...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR GCA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCGTTCCACTGAGCGTTTaGTTGAGACAGAATCTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: ILSFNVNSEKANPPLTSCVPLSV*LRQNLC Trigger: ACAGAGATTCTGTCTCAAGCAAACGCTCAGTGGAAC...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAGAAGTTTGAATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTGGGTGTTCCACTGAGCGTTTaGTTGAGACAGAATCTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TEKFESYLLHSKSYARLGVPLSV*LRQNLC Trigger: ACAGAGATTCTGTCTCAAGCAAACGCTCAGTGGAAC...ACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGAACATGTCAAATGACACACAGGATATAATTGGCAAATGCAATAATTGGGGAGGAGGAAGAAGCTaGAAAGGAACCGTTGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: QRNMSNDTQDIIGKCNNWGGGRS*KGTVVE Trigger: CTCCACAACGGTTCCTTTCCAGCTTCTTCCTCCTCC...CCAATTATTGCATTTGCCAATTATATCCTGTGTGTCATTTGACATGTTCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCCTTCCTCCCCAGTGCTaGGATTACAGCACTTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: ILSFNVNSEKANPPLTSCLPPQC*DYSTFI Trigger: AATAAAAGTGCTGTAATCCCAGCACTGGGGAGGAAG...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCCAGCACTTTTATTACTaGAAACCTAAAACCACACAC | + |
|
Preference number: 2 (lower is better) Translates to: LPAAHYSLESGVRHVLYFQHFYY*KPKTTH Trigger: GTGTGTGGTTTTAGGTTTCCAGTAATAAAAGTGCTG...GAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGAGAAGTTTGAATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTGGGTCTTCACCTTTTATTTTaGGCCACTTTCCTGAAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: TEKFESYLLHSKSYARLGLHLLF*ATFLKL Trigger: CAACTTCAGGAAAGTGGCTCAAAATAAAAGGTGAAG...ACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCACAGAAAATGTTGTGTaGTGCATTTTTATTGGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: LPAAHYSLESGVRHVLYFTENVV*CIFIGS Trigger: GCTACCAATAAAAATGCACCACACAACATTTTCTGT...GAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGAACATGTCAAATGACACACAGGATATAATTGGCAAATGCAATAATTGGTTTCCTGAAGTTGCCTaGGTTGGTCTTGAACCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: QRNMSNDTQDIIGKCNNWFPEVA*VGLEPL Trigger: CAAGGGTTCAAGACCAACCCAGGCAACTTCAGGAAA...CCAATTATTGCATTTGCCAATTATATCCTGTGTGTCATTTGACATGTTCCTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTACCCTTGGATTCAAGTaGTCTTTCTCCTTCAGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: FFSSVPSRPPFSSISSTSTLGFK*SFSFSS Trigger: ACTACTGAAGGAGAAAGAGCACTTGAATCCAAGGGT...ACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTACCATCCTTCATTTTAATCTaGGTATTTGGCCAAACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLLSLLALLLVVLVVLVPSFILI*VFGQTS Trigger: AGAGGTTTGGCCAAATACCCAGATTAAAATGAAGGA...TGGTACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGAGAAGTTTGAATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTGGGTCAGCACTTTTATTACTaGAAACCTAAAACCACACAC | + |
|
Preference number: 2 (lower is better) Translates to: TEKFESYLLHSKSYARLGQHFYY*KPKTTH Trigger: GTGTGTGGTTTTAGGTTTCCAGTAATAAAAGTGCTG...ACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTACCAGAAAATGTTGTGTGGTaGATTTTTATTGGTAGCGTA | + |
|
Preference number: 2 (lower is better) Translates to: SLLSLLALLLVVLVVLVPENVVW*IFIGSV Trigger: TACGCTACCAATAAAAATGCACCACACAACATTTTC...TGGTACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTTCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTAATAAGCCCAATGAATaGATGTCAATTTTAGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FFSSVPSRPPFSSISSTSNKPNE*MSILGS Trigger: GCTGCCTAAAATTGACATTCATTCATTGGGCTTATT...ACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTTCCTTCATTTTAATCTaGGTATTTGGCCAAACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: FFSSVPSRPPFSSISSTSSFILI*VFGQTS Trigger: AGAGGTTTGGCCAAATACCCAGATTAAAATGAAGGA...ACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGGAACATGTCAAATGACACACAGGATATAATTGGCAAATGCAATAATTGGGTATTTTTCAACAAATaGATTGCAAGACAGTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: QRNMSNDTQDIIGKCNNWVFFNK*IARQWR Trigger: CCTCCACTGTCTTGCAATTCATTTGTTGAAAAATAC...CCAATTATTGCATTTGCCAATTATATCCTGTGTGTCATTTGACATGTTCCTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGAACATGTCAAATGACACACAGGATATAATTGGCAAATGCAATAATTGGACAGAAAATGTTGTGTaGTGCATTTTTATTGGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: QRNMSNDTQDIIGKCNNWTENVV*CIFIGS Trigger: GCTACCAATAAAAATGCACCACACAACATTTTCTGT...CCAATTATTGCATTTGCCAATTATATCCTGTGTGTCATTTGACATGTTCCTCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR GCA 72 bp | GAGCGTCTCGCAGTGGGCAGGCGGCAGCGATCTCAGTaGTTCGTGAAGGGTCTCCAATTGCTCGTCAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: ERLAVGRRQRSQ*FVKGLQLLVRV Trigger: GACCCTGACGAGCAATTGGAGACCCTTCACGAAGCACTGAGATCGCTGCCGCCTGCCCACTGCGAGACGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124450.2 |
||
| 3UTR CCA 72 bp | CATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTaGCAGGTGTGCAGAGCCCAAGCAGTTAGCACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HPTHDPGCSRQA*QVCRAQAVSTP Trigger: AGGAGTGCTAACTGCTTGGGCTCTGCACACCTGCCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 72 bp | TCGCAGTGGGCAGGCGGCAGCGATCTCAGTGCTTCGTaGAGGGTCTCCAATTGCTCGTCAGGGTCCATAATT | + |
|
Preference number: 3 (lower is better) Translates to: SQWAGGSDLSAS*RVSNCSSGSII Trigger: AATTATGGACCCTGACGAGCAATTGGAGACCCTTCACGAAGCACTGAGATCGCTGCCGCCTGCCCACTGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124450.2 |
||
| 3UTR GCA 72 bp | CATGACCCTGGCTGTTCCAGACAAGCCTGGCAGGTGTaGAGAGCCCAAGCAGTTAGCACTCCTCACATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HDPGCSRQAWQV*RAQAVSTPHMK Trigger: CTTCATGTGAGGAGTGCTAACTGCTTGGGCTCTGCACACCTGCCAGGCTTGTCTGGAACAGCCAGGGTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR GCA 72 bp | TGGGTGACAACCACAGACAACCCAGGACAGAGGTGGTaGAGGCACAAGTCTGTGATTCCTCAATGTGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: WVTTTDNPGQRW*RHKSVIPQCGV Trigger: AACCCCACATTGAGGAATCACAGACTTGTGCCTGCACCACCTCTGTCCTGGGTTGTCTGTGGTTGTCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 72 bp | ACAACCCAGGACAGAGGTGGTGCAGGCACAAGTCTGTaGTTCCTCAATGTGGGGTTTCCTCACCAAAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TTQDRGGAGTSL*FLNVGFPHQKG Trigger: CCCTTTTTGGTGAGGAAACCCCACATTGAGGAATCACAGACTTGTGCCTGCACCACCTCTGTCCTGGGTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 72 bp | CAGAACAAAATAGGCTTCTGCTCAAAGTCACATGGCTaGCAGGTGGCAGTCCCAAACGCAGACCTTGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QNKIGFCSKSHG*QVAVPNADLGL Trigger: GAGCCCAAGGTCTGCGTTTGGGACTGCCACCTGTCAGCCATGTGACTTTGAGCAGAAGCCTATTTTGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 72 bp | AAAGTCATGACAGTTTACTCTGGGAAGCATGCTGGGTaGCAACCACAGACAACCCAGGACAGAGGTGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KVMTVYSGKHAG*QPQTTQDRGGA Trigger: TGCACCACCTCTGTCCTGGGTTGTCTGTGGTTGTCACCCAGCATGCTTCCCAGAGTAAACTGTCATGACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 72 bp | GAACCGTTGTGGAGTTGGCATATGGTATGGGGATGGTaGTGTAACAGCCAGGGCACTGCTTATGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: EPLWSWHMVWGW*CNSQGTAYVCV Trigger: CACACACACATAAGCAGTGCCCTGGCTGTTACATCACCATCCCCATACCATATGCCAACTCCACAACGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR GCA 72 bp | ATTATACTACTGTGCTTGGCCGTTCCACTGAGCGTTTaGTTGAGACAGAATCTCTGTACCCTAGGCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: IILLCLAVPLSV*LRQNLCTLGWP Trigger: GGGCCAGCCTAGGGTACAGAGATTCTGTCTCAAGCAAACGCTCAGTGGAACGGCCAAGCACAGTAGTATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 72 bp | AAGAAGCTGGAAAGGAACCGTTGTGGAGTTGGCATATaGTATGGGGATGGTGATGTAACAGCCAGGGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: KKLERNRCGVGI*YGDGDVTARAL Trigger: CAGTGCCCTGGCTGTTACATCACCATCCCCATACCATATGCCAACTCCACAACGGTTCCTTTCCAGCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 72 bp | GAGACAGAACAAAATAGGCTTCTGCTCAAAGTCACATaGCTGACAGGTGGCAGTCCCAAACGCAGACCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: ETEQNRLLLKVT*LTGGSPKRRPW Trigger: CCAAGGTCTGCGTTTGGGACTGCCACCTGTCAGCCATGTGACTTTGAGCAGAAGCCTATTTTGTTCTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 72 bp | CCAAGGTTCTCTGCACTCATCAGATTCTCCTTCTCATaGAGGGTCACTCTCTTGAGATGCGCCATGAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: PRFSALIRFSFS*RVTLLRCAMRY Trigger: GTACCTCATGGCGCATCTCAAGAGAGTGACCCTTCATGAGAAGGAGAATCTGATGAGTGCAGAGAACCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124450.2 |
||
| 3UTR GCA 72 bp | GCCCTGAGCTCCATCGTCCTGATTCTTCCTCCCCAGTaGTGGGATTACAGCACTTTTATTACTGGAAACCTA | + |
|
Preference number: 3 (lower is better) Translates to: ALSSIVLILPPQ*WDYSTFITGNL Trigger: TAGGTTTCCAGTAATAAAAGTGCTGTAATCCCAGCACTGGGGAGGAAGAATCAGGACGATGGAGCTCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 72 bp | CATGGACCCCAAAAGCAAAGTCATGACAGTTTACTCTaGGAAGCATGCTGGGTGACAACCACAGACAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: HGPQKQSHDSLL*EACWVTTTDNP Trigger: TGGGTTGTCTGTGGTTGTCACCCAGCATGCTTCCCAGAGTAAACTGTCATGACTTTGCTTTTGGGGTCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 72 bp | CAGAAACCAATGGCATGGACCCCAAAAGCAAAGTCATaGCAGTTTACTCTGGGAAGCATGCTGGGTGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: QKPMAWTPKAKS*QFTLGSMLGDN Trigger: GTTGTCACCCAGCATGCTTCCCAGAGTAAACTGTCATGACTTTGCTTTTGGGGTCCATGCCATTGGTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCCCACTAGCTGGAAAGGAACCGTaGTGGAGTTGGCATATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SFNVNSEKANPPLTSCPLAGKEP*WSWHMV Trigger: TACCATATGCCAACTCCACAACGGTTCCTTTCCAGC...TAGTGGGCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 72 bp | AAATCCTTTGCACATATTAGGCAGGCTCTCTACTACTaGGCTGACTCCCGCCCCGTGACTTGTTTCTACTTT | + |
|
Preference number: 3 (lower is better) Translates to: KSFAHIRQALYY*ADSRPVTCFYF Trigger: AAAGTAGAAACAAGTCACGGGGCGGGAGTCAGCTCAGTAGTAGAGAGCCTGCCTAATATGTGCAAAGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR GCA 72 bp | ACCACAACCACAACAGGCCCTGATCTATCAGCTGTGTaGTTAAATGCGGATGAACTTCACGGCTGTAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: TTTTTGPDLSAV*LNADELHGCNL Trigger: CAAATTACAGCCGTGAAGTTCATCCGCATTTAAGCACACAGCTGATAGATCAGGGCCTGTTGTGGTTGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 72 bp | AATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTaGGTACAGAGCGAGATCCTGTCTCCAAACCCGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NLTCYIVSPMPD*VQSEILSPNPK Trigger: TTTCGGGTTTGGAGACAGGATCTCGCTCTGTACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCGCTGGAAAGGAACCGTaGTGGAGTTGGCATATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ILSFNVNSEKANPPLTSCAGKEP*WSWHMV Trigger: TACCATATGCCAACTCCACAACGGTTCCTTTCCAGC...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGACAGTGGAGGATCCGTCCATACATTAAGCCATGGCAACCACATGTAATAGTTGGTCTTGAACCCTaGGATTCAAGTGCTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ARQWRIRPYIKPWQPHVIVGLEP*DSSALS Trigger: AGAAAGAGCACTTGAATCCAAGGGTTCAAGACCAAC...TATTACATGTGGTTGCCATGGCTTAATGTATGGACGGATCCTCCACTGTCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCTTGCCTGGGTTGGTCTaGAACCCTTGGATTCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ILSFNVNSEKANPPLTSCLPGLV*NPWIQV Trigger: CACTTGAATCCAAGGGTTCAAGACCAACCCAGGCAA...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 72 bp | CTGAGCTCCATCGTCCTGATTCTTCCTCCCCAGTGCTaGGATTACAGCACTTTTATTACTGGAAACCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSSIVLILPPQC*DYSTFITGNLK Trigger: TTTTAGGTTTCCAGTAATAAAAGTGCTGTAATCCCAGCACTGGGGAGGAAGAATCAGGACGATGGAGCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGACAGTGGAGGATCCGTCCATACATTAAGCCATGGCAACCACATGTAATAACTTTTCACAGGACATaGGTTAAGACGACAGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ARQWRIRPYIKPWQPHVITFHRT*VKTTAR Trigger: TCTAGCTGTCGTCTTAACCAATGTCCTGTGAAAAGT...TATTACATGTGGTTGCCATGGCTTAATGTATGGACGGATCCTCCACTGTCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 72 bp | TCTCCCCAACAAAGTGCTTTCCATCGTAGTACAGCCTaGAGTTTCTGGTCTGACTTCCAAATCTTAAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SPQQSAFHRSTA*SFWSDFQILKP Trigger: TGGCTTTAAGATTTGGAAGTCAGACCAGAAACTTCAGGCTGTACTACGATGGAAAGCACTTTGTTGGGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124450.2 |
||
| 3UTR GCA 72 bp | CATGTAACCCCAACACTGAGAAGTTTGAATCTTACCTaGTACATAGTAAGTCCTATGCCAGACTGGGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: HVTPTLRSLNLT*YIVSPMPDWVQ Trigger: CTGTACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGTGTTGGGGTTACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 72 bp | TCACCTTTTATTTTGAGCCACTTTCCTGAAGTTGCCTaGGTTGGTCTTGAACCCTTGGATTCAAGTGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SPFILSHFPEVA*VGLEPLDSSAL Trigger: AAGAGCACTTGAATCCAAGGGTTCAAGACCAACCCAGGCAACTTCAGGAAAGTGGCTCAAAATAAAAGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTTTGCCTGGGTTGGTCTaGAACCCTTGGATTCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FFSSVPSRPPFSSISSTSLPGLV*NPWIQV Trigger: CACTTGAATCCAAGGGTTCAAGACCAACCCAGGCAA...ACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCCATTCTTCACCTTTTATTTaGAGCCACTTTCCTGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PAAHYSLESGVRHVLYFHSSPFI*SHFPEV Trigger: AACTTCAGGAAAGTGGCTCAAAATAAAAGGTGAAGA...ATGGAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTCTCCCGCCCCGTGACTaGTTTCTACTTTTGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: FFSSVPSRPPFSSISSTSLPPRD*FLLLKM Trigger: CATCTTCAAAAGTAGAAACAAGTCACGGGGCGGGAG...ACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 72 bp | GTTTCCTCACCAAAAAGGGGTAATCATGCAGTAGCTTaGGTTTCTCTTAACATGATAGACACCCAGGGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: VSSPKRGNHAVA*VSLNMIDTQGY Trigger: GTAACCCTGGGTGTCTATCATGTTAAGAGAAACTCAAGCTACTGCATGATTACCCCTTTTTGGTGAGGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR TCA 72 bp | TCCCTGAATATCAATACTTTCCTTCAATGTAAACAGTaGGAAAGCAAACCCACCACTTACCAGCTGCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SLNINTFLQCKQ*ESKPTTYQLPT Trigger: AGTGGGCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTATTGATATTCAGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGACAGTGGAGGATCCGTCCATACATTAAGCCATGGCAACCACATGTAATAACACGTTTTGTTTTATaGTTTACAGCAGGATGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ARQWRIRPYIKPWQPHVITRFVL*FTAGWN Trigger: GTTCCATCCTGCTGTAAACAATAAAACAAAACGTGT...TATTACATGTGGTTGCCATGGCTTAATGTATGGACGGATCCTCCACTGTCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCCCACTATCTTCACCTTTTATTTaGAGCCACTTTCCTGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SFNVNSEKANPPLTSCPLSSPFI*SHFPEV Trigger: AACTTCAGGAAAGTGGCTCAAAATAAAAGGTGAAGA...TAGTGGGCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGACAGTGGAGGATCCGTCCATACATTAAGCCATGGCAACCACATGTAATAATCTGTGCATTCTGTTaGATTCTTAGTGTGGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ARQWRIRPYIKPWQPHVIICAFC*ILSVVK Trigger: TTTCACCACACTAAGAATCAAACAGAATGCACAGAT...TATTACATGTGGTTGCCATGGCTTAATGTATGGACGGATCCTCCACTGTCTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGAACATGTCAAATGACACACAGGATATAATTGGCAAATGCAATAATTGGCTCCCGCCCCGTGACTaGTTTCTACTTTTGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: QRNMSNDTQDIIGKCNNWLPPRD*FLLLKM Trigger: CATCTTCAAAAGTAGAAACAAGTCACGGGGCGGGAG...CCAATTATTGCATTTGCCAATTATATCCTGTGTGTCATTTGACATGTTCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAGAAGTTTGAATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTGGGTGGTTGTTTAAATCCTTaGCACATATTAGGCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: TEKFESYLLHSKSYARLGGCLNP*HILGRL Trigger: GAGCCTGCCTAATATGTGCAAAGGATTTAAACAACC...ACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTGTTGGTCTTGAACCCTaGGATTCAAGTGCTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FFSSVPSRPPFSSISSTSVGLEP*DSSALS Trigger: AGAAAGAGCACTTGAATCCAAGGGTTCAAGACCAAC...ACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGAACATGTCAAATGACACACAGGATATAATTGGCAAATGCAATAATTGGGGTTGTTTAAATCCTTaGCACATATTAGGCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QRNMSNDTQDIIGKCNNWGCLNP*HILGRL Trigger: GAGCCTGCCTAATATGTGCAAAGGATTTAAACAACC...CCAATTATTGCATTTGCCAATTATATCCTGTGTGTCATTTGACATGTTCCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR CCA 72 bp | ACTTTTCACAGGACATTGGTTAAGACGACAGCTAGATaGAGTATCCCTGAATATCAATACTTTCCTTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: TFHRTLVKTTAR*SIPEYQYFPSM Trigger: CATTGAAGGAAAGTATTGATATTCAGGGATACTCCATCTAGCTGTCGTCTTAACCAATGTCCTGTGAAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGAACATGTCAAATGACACACAGGATATAATTGGCAAATGCAATAATTGGTTTTCAACAAATGAATaGCAAGACAGTGGAGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: QRNMSNDTQDIIGKCNNWFSTNE*QDSGGS Trigger: GGATCCTCCACTGTCTTGCAATTCATTTGTTGAAAA...CCAATTATTGCATTTGCCAATTATATCCTGTGTGTCATTTGACATGTTCCTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGAACATGTCAAATGACACACAGGATATAATTGGCAAATGCAATAATTGGATCTGTGCATTCTGTTaGATTCTTAGTGTGGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QRNMSNDTQDIIGKCNNWICAFC*ILSVVK Trigger: TTTCACCACACTAAGAATCAAACAGAATGCACAGAT...CCAATTATTGCATTTGCCAATTATATCCTGTGTGTCATTTGACATGTTCCTCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR GCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGGTGTACGTTCCTGGCTaGCGCTGGCTCTCACGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWVYVPG*RWLSRM Trigger: CATCCGTGAGAGCCAGCGGCAGCCAGGAACGTACAC...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112024.10 |
||
| CDS-3UTR CCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGCAAAGTGTACGTTCCTaGCTGCCGCTGGCTCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWQSVRS*LPLALT Trigger: CGTGAGAGCCAGCGGCAGCCAGGAACGTACACTTTG...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112024.10 |
||
| CDS-3UTR GCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGGTCACTCTCTTGAGATaGGCCATGAGGTACCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWVTLLR*AMRYRS Trigger: GCTCCGGTACCTCATGGCGCATCTCAAGAGAGTGAC...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR GCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGATCAGTAAGCCTTGCTaGCGGCCCTCGGGTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWISKPC*RPSGFA Trigger: AGCAAAACCCGAGGGCCGGCAGCAAGGCTTACTGAT...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102677.11 |
||
| CDS-3UTR TCA 90 bp | GTCAGGTCACAGCTGTACACCTTCTTCACGTGCTTCAGATCTGGCTTACAGTCAGTGACCCTTCGAGGGTaGGGGGCTTCCTGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRSQLYTFFTCFRSGLQSVTLRG*GASCCS Trigger: GCTGCAGCAGGAAGCCCCTCACCCTCGAAGGGTCAC...TGACTGTAAGCCAGATCTGAAGCACGTGAAGAAGGTGTACAGCTGTGACCTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139252.2 |
||
| CDS-3UTR TCA 90 bp | TGGCATGGACCCCAAAAGCAAAGTCATGACAGTTTACTCTGGGAAGCATGCTGGGCTGGCTCTCACGGATaGGGTAGCTCCCCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WHGPQKQSHDSLLWEACWAGSHG*GSSPQP Trigger: TGGCTGAGGGGAGCTACCTCATCCGTGAGAGCCAGC...CCAGCATGCTTCCCAGAGTAAACTGTCATGACTTTGCTTTTGGGGTCCATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112024.10 |
||
| CDS-3UTR TCA 90 bp | GTCAGGTCACAGCTGTACACCTTCTTCACGTGCTTCAGATCTGGCTTACAGTCAGCTGGCTCTCACGGATaGGGTAGCTCCCCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRSQLYTFFTCFRSGLQSAGSHG*GSSPQP Trigger: TGGCTGAGGGGAGCTACCTCATCCGTGAGAGCCAGC...TGACTGTAAGCCAGATCTGAAGCACGTGAAGAAGGTGTACAGCTGTGACCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139252.2 |
||
| CDS-3UTR GCA 90 bp | TCACGAGCGTTGTCAGGTCACAGCTGTACACCTTCTTCACGTGCTTCAGATCTGGTGTACGTTCCTGGCTaGCGCTGGCTCTCACGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SRALSGHSCTPSSRASDLVYVPG*RWLSRM Trigger: CATCCGTGAGAGCCAGCGGCAGCCAGGAACGTACAC...CAGATCTGAAGCACGTGAAGAAGGTGTACAGCTGTGACCTGACAACGCTCGTGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139252.2 |
||
| CDS-3UTR CCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGCACGTGCTTCAGATCTaGCTTACAGTCATTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWHVLQI*LTVIGD Trigger: GTCCCCAATGACTGTAAGCCAGATCTGAAGCACGTG...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR CCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGTCACCAGATCGTGGATaGACTCAAAGCGTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWSPDRG*TQSVSP Trigger: GGGAGAAACGCTTTGAGTCCATCCACGATCTGGTGA...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112024.10 |
||
| CDS-3UTR CCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGTCTGATACCCCATCCTaGCCTGTAGCCTCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWSDTPS*PVASFS Trigger: TGAGAAAGAGGCTACAGGCCAGGATGGGGTATCAGA...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112024.10 |
||
| CDS-3UTR TCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGTTTTGGCAGACTCAATaGACTTGGGGTAGGCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWFWQTQ*TWGRHR Trigger: ACGATGCCTACCCCAAGTTCATTGAGTCTGCCAAAA...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | AGACACCCAGGGTTACCGGGACCAGAAAGCGTGTGTGCACTGTTTTACAAGGACGCACATTTCACTCCCTaGGCAATGAGGCCCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: RHPGLPGPESVCALFYKDAHFTP*AMRPHM Trigger: CATGTGGGGCCTCATTGCTCAGGGAGTGAAATGTGC...GTCCTTGTAAAACAGTGCACACACGCTTTCTGGTCCCGGTAACCCTGGGTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 |
||
| CDS-3UTR TCA 90 bp | GCAAGACAGTGGAGGATCCGTCCATACATTAAGCCATGGCAACCACATGTAATAGTGACCCTTCGAGGGTaGGGGGCTTCCTGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARQWRIRPYIKPWQPHVIVTLRG*GASCCS Trigger: GCTGCAGCAGGAAGCCCCTCACCCTCGAAGGGTCAC...TATTACATGTGGTTGCCATGGCTTAATGTATGGACGGATCCTCCACTGTCTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112024.10 |
||
| CDS-3UTR CCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGTCAGTCACCAGATCGTaGATGGACTCAAAGCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWSVTRS*MDSKRF Trigger: GAAACGCTTTGAGTCCATCCACGATCTGGTGACTGA...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112024.10 |
||
| CDS-3UTR CCA 90 bp | GTCAGGTCACAGCTGTACACCTTCTTCACGTGCTTCAGATCTGGCTTACAGTCACAAAGTGTACGTTCCTaGCTGCCGCTGGCTCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: VRSQLYTFFTCFRSGLQSQSVRS*LPLALT Trigger: CGTGAGAGCCAGCGGCAGCCAGGAACGTACACTTTG...TGACTGTAAGCCAGATCTGAAGCACGTGAAGAAGGTGTACAGCTGTGACCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139252.2 |
||
| CDS-3UTR GCA 90 bp | TGGCATGGACCCCAAAAGCAAAGTCATGACAGTTTACTCTGGGAAGCATGCTGGGTCACTCTCTTGAGATaGGCCATGAGGTACCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WHGPQKQSHDSLLWEACWVTLLR*AMRYRS Trigger: GCTCCGGTACCTCATGGCGCATCTCAAGAGAGTGAC...CCAGCATGCTTCCCAGAGTAAACTGTCATGACTTTGCTTTTGGGGTCCATGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTGCACTGTTTTACAAGGACAGCTGAGCGGTGCTATAGAAATGACAGGAAGCCATTGGCCGCTTGGTaGTGTGAGCTTTCACGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CVHCFTRTAERCYRNDRKPLAAW*CELSRA Trigger: CGCTCGTGAAAGCTCACATCACCAAGCGGCCAATGG...CTTCCTGTCATTTCTATAGCACCGCTCAGCTGTCCTTGTAAAACAGTGCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGTATCAAAAGCCATCTTaGCATCTTCAATCAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWYQKPS*HLQSGH Trigger: GTGACCTGATTGAAGATGTCAAGATGGCTTTTGATA...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR CCA 90 bp | TGGCATGGACCCCAAAAGCAAAGTCATGACAGTTTACTCTGGGAAGCATGCTGGCATGTCTACCACCATTaGCCGCTTGGTGATGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WHGPQKQSHDSLLWEACWHVYHH*PLGDVS Trigger: GCTCACATCACCAAGCGGCCAATGGTGGTAGACATG...CCAGCATGCTTCCCAGAGTAAACTGTCATGACTTTGCTTTTGGGGTCCATGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGGTCACAGCTGTACACCTTCTTCACGTGCTTCAGATCTGGCTTACAGTCAGCCACACTCAGGAGCTaGTCAGTCTCTTCTCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRSQLYTFFTCFRSGLQSATLRS*SVSSLE Trigger: CTCTAGAGAAGAGACTGACCAGCTCCTGAGTGTGGC...TGACTGTAAGCCAGATCTGAAGCACGTGAAGAAGGTGTACAGCTGTGACCTGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139252.2 |
||
| CDS-3UTR TCA 90 bp | TGGCATGGACCCCAAAAGCAAAGTCATGACAGTTTACTCTGGGAAGCATGCTGGCAGGTCACTAAATCCTaGCACTCGGTAGAGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WHGPQKQSHDSLLWEACWQVTKS*HSVESF Trigger: GAAGGACTCTACCGAGTGTCAGGATTTAGTGACCTG...CCAGCATGCTTCCCAGAGTAAACTGTCATGACTTTGCTTTTGGGGTCCATGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR GCA 90 bp | AGACACCCAGGGTTACCGGGACCAGAAAGCGTGTGTGCACTGTTTTACAAGGACTGTCTCTTTCAGGACTaGCATGTGCTGTTTGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: RHPGLPGPESVCALFYKDCLFQD*HVLFVC Trigger: GCATACAAACAGCACATGGCAGTCCTGAAAGAGACA...GTCCTTGTAAAACAGTGCACACACGCTTTCTGGTCCCGGTAACCCTGGGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112024.10 |
||
| CDS-3UTR TCA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCGGCCGCTTGGTGATGTaGGCTTTCACGAGCGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILSFNVNSEKANPPLTSCGRLVM*AFTSVV Trigger: GACAACGCTCGTGAAAGCTCACATCACCAAGCGGCC...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCCATCAGGTCACTAAATCCTaGCACTCGGTAGAGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PAAHYSLESGVRHVLYFHQVTKS*HSVESF Trigger: GAAGGACTCTACCGAGTGTCAGGATTTAGTGACCTG...ATGGAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | TTACCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCGATCTCAGTGCTTCGTaGAGGGTCTCCAATTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LPAAHYSLESGVRHVLYFDLSAS*RVSNCS Trigger: CGAGCAATTGGAGACCCTTCACGAAGCACTGAGATC...GAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTGTGACCCTTCGAGGGTaGGGGGCTTCCTGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIVTLRG*GASCCS Trigger: GCTGCAGCAGGAAGCCCCTCACCCTCGAAGGGTCAC...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000166199.9 |
||
| CDS-3UTR GCA 90 bp | AGACACCCAGGGTTACCGGGACCAGAAAGCGTGTGTGCACTGTTTTACAAGGACAAGAGTTTCAGAGGTTaGCAGATTGTCACAGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RHPGLPGPESVCALFYKDKSFRG*QIVTDD Trigger: GTCATCTGTGACAATCTGGCAACCTCTGAAACTCTT...GTCCTTGTAAAACAGTGCACACACGCTTTCTGGTCCCGGTAACCCTGGGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102677.11 |
||
| CDS-3UTR TCA 90 bp | TCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCCCACTACAGGTCACTAAATCCTaGCACTCGGTAGAGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFNVNSEKANPPLTSCPLQVTKS*HSVESF Trigger: GAAGGACTCTACCGAGTGTCAGGATTTAGTGACCTG...TAGTGGGCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | TGGCATGGACCCCAAAAGCAAAGTCATGACAGTTTACTCTGGGAAGCATGCTGGAGATTCTCCTTCTCATaGAGGGTCACTCTCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WHGPQKQSHDSLLWEACWRFSFS*RVTLLR Trigger: TCTCAAGAGAGTGACCCTTCATGAGAAGGAGAATCT...CCAGCATGCTTCCCAGAGTAAACTGTCATGACTTTGCTTTTGGGGTCCATGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGAAGTTTGAATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTGGGTGCACATTTCACTCCCTaGGCAATGAGGCCCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: TEKFESYLLHSKSYARLGAHFTP*AMRPHM Trigger: CATGTGGGGCCTCATTGCTCAGGGAGTGAAATGTGC...ACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 |
||
| CDS-3UTR TCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTGCTGGCTCTCACGGATaGGGTAGCTCCCCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIAGSHG*GSSPQP Trigger: TGGCTGAGGGGAGCTACCTCATCCGTGAGAGCCAGC...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000166199.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTGCACTGTTTTACAAGGACAGCTGAGCGGTGCTATAGAAATGACAGGAAGCACGTGCTTCAGATCTaGCTTACAGTCATTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CVHCFTRTAERCYRNDRKHVLQI*LTVIGD Trigger: GTCCCCAATGACTGTAAGCCAGATCTGAAGCACGTG...CTTCCTGTCATTTCTATAGCACCGCTCAGCTGTCCTTGTAAAACAGTGCACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAGGCCGCTTGGTGATGTaGGCTTTCACGAGCGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IWVFGQTSNEETIQLMKLGRLVM*AFTSVV Trigger: GACAACGCTCGTGAAAGCTCACATCACCAAGCGGCC...TAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | TTACCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCTTTTGGCAGACTCAATaGACTTGGGGTAGGCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPAAHYSLESGVRHVLYFFWQTQ*TWGRHR Trigger: ACGATGCCTACCCCAAGTTCATTGAGTCTGCCAAAA...GAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTACCAGATCTCAGTGCTTCGTaGAGGGTCTCCAATTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLLALLLVVLVVLVPDLSAS*RVSNCS Trigger: CGAGCAATTGGAGACCCTTCACGAAGCACTGAGATC...TGGTACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTGTGTACGTTCCTGGCTaGCGCTGGCTCTCACGGATG | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIVYVPG*RWLSRM Trigger: CATCCGTGAGAGCCAGCGGCAGCCAGGAACGTACAC...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000166199.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCCATTGTGATGAGAGGAATTaGCAGATCCCTGAAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: PAAHYSLESGVRHVLYFHCDERN*QIPEVQ Trigger: CTGTACTTCAGGGATCTGCCAATTCCTCTCATCACA...ATGGAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTGGCCGCTTGGTGATGTaGGCTTTCACGAGCGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIGRLVM*AFTSVV Trigger: GACAACGCTCGTGAAAGCTCACATCACCAAGCGGCC...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTCCATTGGCCGCTTGGTaGTGTGAGCTTTCACGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIPLAAW*CELSRA Trigger: CGCTCGTGAAAGCTCACATCACCAAGCGGCCAATGG...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTGCACTGTTTTACAAGGACAGCTGAGCGGTGCTATAGAAATGACAGGAAGAGATTCTCCTTCTCATaGAGGGTCACTCTCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CVHCFTRTAERCYRNDRKRFSFS*RVTLLR Trigger: TCTCAAGAGAGTGACCCTTCATGAGAAGGAGAATCT...CTTCCTGTCATTTCTATAGCACCGCTCAGCTGTCCTTGTAAAACAGTGCACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAGTCACTCTCTTGAGATaGGCCATGAGGTACCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IWVFGQTSNEETIQLMKLVTLLR*AMRYRS Trigger: GCTCCGGTACCTCATGGCGCATCTCAAGAGAGTGAC...TAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCCATAACTTTCAGGACTGCCATGTaGTGTTTGTATGCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPTTAWKVELDMFCISITFRTAM*CLYAGS Trigger: AGAGCCAGCATACAAACAGCACATGGCAGTCCTGAA...AGTTATGGAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112024.10 |
||
| CDS-3UTR CCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTCAAAGTGTACGTTCCTaGCTGCCGCTGGCTCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIQSVRS*LPLALT Trigger: CGTGAGAGCCAGCGGCAGCCAGGAACGTACACTTTG...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000166199.9 |
||
| CDS-3UTR TCA 90 bp | ACTGAGAAGTTTGAATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTGGGTTTTTGGCAGACTCAATaGACTTGGGGTAGGCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: TEKFESYLLHSKSYARLGFWQTQ*TWGRHR Trigger: ACGATGCCTACCCCAAGTTCATTGAGTCTGCCAAAA...ACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTGATCTCAGTGCTTCGTaGAGGGTCTCCAATTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FFSSVPSRPPFSSISSTSDLSAS*RVSNCS Trigger: CGAGCAATTGGAGACCCTTCACGAAGCACTGAGATC...ACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCGTCACAGATGACTTTTaGGAGCCCAGTTTCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSFNVNSEKANPPLTSCVTDDF*EPSFIP Trigger: GGGAATGAAACTGGGCTCTCAAAAGTCATCTGTGAC...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102677.11 |
||
| CDS-3UTR TCA 90 bp | CTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCCATAACTCCAGATTGTCACAGATaGCTTTTGAGAGCCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPTTAWKVELDMFCISITPDCHR*LLRAQF Trigger: AAACTGGGCTCTCAAAAGTCATCTGTGACAATCTGG...AGTTATGGAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102677.11 |
||
| CDS-3UTR TCA 90 bp | TCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCCCACTATGCTCTTCTAACAAGTaGTGTCAACTGCGAATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFNVNSEKANPPLTSCPLCSSNK*CQLRIS Trigger: GCTTATTCGCAGTTGACATCACTTGTTAGAAGAGCA...TAGTGGGCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102677.11 |
||
| CDS-3UTR TCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTGCACATTTCACTCCCTaGGCAATGAGGCCCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIAHFTP*AMRPHM Trigger: CATGTGGGGCCTCATTGCTCAGGGAGTGAAATGTGC...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000166199.9 |
||
| CDS-3UTR GCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTGTCACTCTCTTGAGATaGGCCATGAGGTACCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIVTLLR*AMRYRS Trigger: GCTCCGGTACCTCATGGCGCATCTCAAGAGAGTGAC...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000166199.9 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS-3UTR CCA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCCTGGCTTACAGTCATTaGGGACCATCTTGGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: ILSFNVNSEKANPPLTSCLAYSH*GPSWNT Trigger: AGTGTTCCAAGATGGTCCCCAATGACTGTAAGCCAG...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 |
||
| CDS-3UTR TCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTGATCTCAGTGCTTCGTaGAGGGTCTCCAATTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIDLSAS*RVSNCS Trigger: CGAGCAATTGGAGACCCTTCACGAAGCACTGAGATC...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000166199.9 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS-3UTR TCA 90 bp | GCAAGACAGTGGAGGATCCGTCCATACATTAAGCCATGGCAACCACATGTAATAGGAACGTATGCACCTTaGAATTGTGAACCTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ARQWRIRPYIKPWQPHVIGTYAP*NCEPFH Trigger: ATGAAAAGGTTCACAATTTCAAGGTGCATACGTTCC...TATTACATGTGGTTGCCATGGCTTAATGTATGGACGGATCCTCCACTGTCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 |
||
| CDS-3UTR CCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTCATGTCTACCACCATTaGCCGCTTGGTGATGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIHVYHH*PLGDVS Trigger: GCTCACATCACCAAGCGGCCAATGGTGGTAGACATG...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS-3UTR CCA 90 bp | ACTGAGAAGTTTGAATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTGGGTTGTGATGAGAGGAATTaGCAGATCCCTGAAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TEKFESYLLHSKSYARLGCDERN*QIPEVQ Trigger: CTGTACTTCAGGGATCTGCCAATTCCTCTCATCACA...ACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTGCCACACTCAGGAGCTaGTCAGTCTCTTCTCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIATLRS*SVSSLE Trigger: CTCTAGAGAAGAGACTGACCAGCTCCTGAGTGTGGC...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000166199.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTCAGGTCACTAAATCCTaGCACTCGGTAGAGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIQVTKS*HSVESF Trigger: GAAGGACTCTACCGAGTGTCAGGATTTAGTGACCTG...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000166199.9 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTATTTTGGCAGACTCAATaGACTTGGGGTAGGCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: IWVFGQTSNEETIQLMKLFWQTQ*TWGRHR Trigger: ACGATGCCTACCCCAAGTTCATTGAGTCTGCCAAAA...TAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTCACGTGCTTCAGATCTaGCTTACAGTCATTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIHVLQI*LTVIGD Trigger: GTCCCCAATGACTGTAAGCCAGATCTGAAGCACGTG...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTTCACCAGATCGTGGATaGACTCAAAGCGTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLISPDRG*TQSVSP Trigger: GGGAGAAACGCTTTGAGTCCATCCACGATCTGGTGA...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000166199.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTTCTGATACCCCATCCTaGCCTGTAGCCTCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLISDTPS*PVASFS Trigger: TGAGAAAGAGGCTACAGGCCAGGATGGGGTATCAGA...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000166199.9 |
||
| CDS-3UTR TCA 90 bp | ACTGAGAAGTTTGAATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTGGGTTATCAAAAGCCATCTTaGCATCTTCAATCAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TEKFESYLLHSKSYARLGYQKPS*HLQSGH Trigger: GTGACCTGATTGAAGATGTCAAGATGGCTTTTGATA...ACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTTTTTGGCAGACTCAATaGACTTGGGGTAGGCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIFWQTQ*TWGRHR Trigger: ACGATGCCTACCCCAAGTTCATTGAGTCTGCCAAAA...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000166199.9 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAAGATTCTCCTTCTCATaGAGGGTCACTCTCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IWVFGQTSNEETIQLMKLRFSFS*RVTLLR Trigger: TCTCAAGAGAGTGACCCTTCATGAGAAGGAGAATCT...TAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTAGATTCTCCTTCTCATaGAGGGTCACTCTCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FFSSVPSRPPFSSISSTSRFSFS*RVTLLR Trigger: TCTCAAGAGAGTGACCCTTCATGAGAAGGAGAATCT...ACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGAAGTTTGAATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTGGGTGGAACGTATGCACCTTaGAATTGTGAACCTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TEKFESYLLHSKSYARLGGTYAP*NCEPFH Trigger: ATGAAAAGGTTCACAATTTCAAGGTGCATACGTTCC...ACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 |
||
| CDS-3UTR GCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTTTCAGGACTGCCATGTaGTGTTTGTATGCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIFRTAM*CLYAGS Trigger: AGAGCCAGCATACAAACAGCACATGGCAGTCCTGAA...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000166199.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTATGTGATGAGAGGAATTaGCAGATCCCTGAAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: IWVFGQTSNEETIQLMKLCDERN*QIPEVQ Trigger: CTGTACTTCAGGGATCTGCCAATTCCTCTCATCACA...TAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTCTTCTGTCCCTTCTCGCCCTCCTTTTAGTAGTATTAGTAGTACTAGTTGTGATGAGAGGAATTaGCAGATCCCTGAAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: FFSSVPSRPPFSSISSTSCDERN*QIPEVQ Trigger: CTGTACTTCAGGGATCTGCCAATTCCTCTCATCACA...ACTAGTACTACTAATACTACTAAAAGGAGGGCGAGAAGGGACAGAAGAGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGAACATGTCAAATGACACACAGGATATAATTGGCAAATGCAATAATTGGCTGGCTTACAGTCATTaGGGACCATCTTGGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: QRNMSNDTQDIIGKCNNWLAYSH*GPSWNT Trigger: AGTGTTCCAAGATGGTCCCCAATGACTGTAAGCCAG...CCAATTATTGCATTTGCCAATTATATCCTGTGTGTCATTTGACATGTTCCTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112024.10 |
||
| CDS-3UTR CCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTTCAGTCACCAGATCGTaGATGGACTCAAAGCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLISVTRS*MDSKRF Trigger: GAAACGCTTTGAGTCCATCCACGATCTGGTGACTGA...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000166199.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTAGATTCTCCTTCTCATaGAGGGTCACTCTCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIRFSFS*RVTLLR Trigger: TCTCAAGAGAGTGACCCTTCATGAGAAGGAGAATCT...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000166199.9 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTGATCCCAAGGTTCTCTaGACTCATCAGATTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIDPKVL*THQILL Trigger: AAGGAGAATCTGATGAGTGCAGAGAACCTTGGGATC...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000166199.9 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTTGTCTCTTTCAGGACTaGCATGTGCTGTTTGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLICLFQD*HVLFVC Trigger: GCATACAAACAGCACATGGCAGTCCTGAAAGAGACA...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000166199.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTTGTGATGAGAGGAATTaGCAGATCCCTGAAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLICDERN*QIPEVQ Trigger: CTGTACTTCAGGGATCTGCCAATTCCTCTCATCACA...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000166199.9 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTATATCAAAAGCCATCTTaGCATCTTCAATCAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IWVFGQTSNEETIQLMKLYQKPS*HLQSGH Trigger: GTGACCTGATTGAAGATGTCAAGATGGCTTTTGATA...TAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTTTCAGAATTAAGACCTaGACATTTCACTCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIFRIKT*TFHSLS Trigger: GCTCAGGGAGTGAAATGTGCAGGTCTTAATTCTGAA...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166199.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTTATCAAAAGCCATCTTaGCATCTTCAATCAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIYQKPS*HLQSGH Trigger: GTGACCTGATTGAAGATGTCAAGATGGCTTTTGATA...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000166199.9 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTGGAACGTATGCACCTTaGAATTGTGAACCTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WVFGQTSNEETIQLMKLIGTYAP*NCEPFH Trigger: ATGAAAAGGTTCACAATTTCAAGGTGCATACGTTCC...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000166199.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCCATGCCGGCCCTCGGGTTTaGCTTTGTGGACTGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PAAHYSLESGVRHVLYFHAGPRV*LCGLWL Trigger: GAGCCACAGTCCACAAAGCAAAACCCGAGGGCCGGC...ATGGAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102677.11 |
||
| CDS-3UTR CAA 90 bp | ACCCGTGTGTCATGGCATCCCACACATGACCCTGGCTGTTCCAGACAAGCCTGGACTGCCATGTGCTGTTaGTATGCTGGCTCTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TRVSWHPTHDPGCSRQAWTAMCC*YAGSLF Trigger: AAACAGAGAGCCAGCATACAAACAGCACATGGCAGT...CCAGGCTTGTCTGGAACAGCCAGGGTCATGTGTGGGATGCCATGACACACGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112024.10 |
||
| CDS-3UTR CAA 90 bp | GCAAGACAGTGGAGGATCCGTCCATACATTAAGCCATGGCAACCACATGTAATAGAGCTTTCACGAGCGTaGTCAGGTCACAGCTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: ARQWRIRPYIKPWQPHVIELSRA*SGHSCT Trigger: TGTACAGCTGTGACCTGACAACGCTCGTGAAAGCTC...TATTACATGTGGTTGCCATGGCTTAATGTATGGACGGATCCTCCACTGTCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGCACTGTTTTACAAGGACAGCTGAGCGGTGCTATAGAAATGACAGGAAGGAGCTTTCACGAGCGTaGTCAGGTCACAGCTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: CVHCFTRTAERCYRNDRKELSRA*SGHSCT Trigger: TGTACAGCTGTGACCTGACAACGCTCGTGAAAGCTC...CTTCCTGTCATTTCTATAGCACCGCTCAGCTGTCCTTGTAAAACAGTGCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGCACTGTTTTACAAGGACAGCTGAGCGGTGCTATAGAAATGACAGGAAGCCCTCGGGTTTTGCTTaGTGGACTGTGGCTCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: CVHCFTRTAERCYRNDRKPSGFA*WTVALL Trigger: TAACAGAGCCACAGTCCACAAAGCAAAACCCGAGGG...CTTCCTGTCATTTCTATAGCACCGCTCAGCTGTCCTTGTAAAACAGTGCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102677.11 |
||
| CDS-3UTR CAA 90 bp | TTACCAGCTGCCCACTACAGCCTGGAAAGTGGAGTTAGACATGTTCTGTATTTCTCTGGCTTACAGTCATaGGGGACCATCTTGGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: LPAAHYSLESGVRHVLYFSGLQS*GTILEH Trigger: GTGTTCCAAGATGGTCCCCAATGACTGTAAGCCAGA...GAAATACAGAACATGTCTAACTCCACTTTCCAGGCTGTAGTGGGCAGCTGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 |
||
| CDS-3UTR CAA 90 bp | ACTGAGAAGTTTGAATCTTACCTGCTACATAGTAAGTCCTATGCCAGACTGGGTGAGCTTTCACGAGCGTaGTCAGGTCACAGCTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: TEKFESYLLHSKSYARLGELSRA*SGHSCT Trigger: TGTACAGCTGTGACCTGACAACGCTCGTGAAAGCTC...ACCCAGTCTGGCATAGGACTTACTATGTAGCAGGTAAGATTCAAACTTCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 |
||
| CDS-3UTR CAA 90 bp | ATACTTTCCTTCAATGTAAACAGTGAGAAAGCAAACCCACCACTTACCAGCTGCTCTGGCTTACAGTCATaGGGGACCATCTTGGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: ILSFNVNSEKANPPLTSCSGLQS*GTILEH Trigger: GTGTTCCAAGATGGTCCCCAATGACTGTAAGCCAGA...GCAGCTGGTAAGTGGTGGGTTTGCTTTCTCACTGTTTACATTGAAGGAAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102677.11 ENSMUST00000112024.10 |
||
| CDS-3UTR CAA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTGAGCTTTCACGAGCGTaGTCAGGTCACAGCTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: WVFGQTSNEETIQLMKLIELSRA*SGHSCT Trigger: TGTACAGCTGTGACCTGACAACGCTCGTGAAAGCTC...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTATCAGAGGTTGCCAGATaGTCACAGATGACTTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IWVFGQTSNEETIQLMKLSEVAR*SQMTFE Trigger: CTCAAAAGTCATCTGTGACAATCTGGCAACCTCTGA...TAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102677.11 |
||
| CDS-3UTR CAA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTACTGCCATGTGCTGTTaGTATGCTGGCTCTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: WVFGQTSNEETIQLMKLITAMCC*YAGSLF Trigger: AAACAGAGAGCCAGCATACAAACAGCACATGGCAGT...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112024.10 ENSMUST00000166199.9 |
||
| CDS-3UTR CAA 90 bp | TGGGTATTTGGCCAAACCTCTAACGAAGAAACAATTCAGCTAATGAAGCTAATTGCACCAGTGATAATGTaGATGTCCTCATACATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WVFGQTSNEETIQLMKLIAPVIM*MSSYMF Trigger: GAACATGTATGAGGACATCAACATTATCACTGGTGC...AATTAGCTTCATTAGCTGAATTGTTTCTTCGTTAGAGGTTTGGCCAAATACCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000166199.9 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS CCA 72 bp | GCGTATGTCGTTCAGGGCGGCCATGGGGTCGAGCTCTaGGGATCTCATGAGGGTTGGTCCAAACACGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: AYVVQGGHGVEL*GSHEGWSKHDP Trigger: GGGATCGTGTTTGGACCAACCCTCATGAGATCCCCAGAGCTCGACCCCATGGCCGCCCTGAACGACATACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000070579.7 ENSMUST00000102677.11 ENSMUST00000112024.10 ENSMUST00000166199.9 ENSMUST00000180045.8 ENSMUST00000229731.2 |
||
| CDS CAA 72 bp | ATCAGTAAGCCTTGCTGCCGGCCCTCGGGTTTTGCTTaGTGGACTGTGGCTCTGTTAGCTTTCCTCCCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: ISKPCCRPSGFA*WTVALLAFLPD Trigger: GTCGGGGAGGAAAGCTAACAGAGCCACAGTCCACAAAGCAAAACCCGAGGGCCGGCAGCAAGGCTTACTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102677.11 |
||
| CDS GCA 72 bp | CCCAGTTTCATTCCCAAGGCTGCTATCAGTAAGCCTTaGTGCCGGCCCTCGGGTTTTGCTTTGTGGACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PSFIPKAAISKP*CRPSGFALWTV Trigger: CACAGTCCACAAAGCAAAACCCGAGGGCCGGCAGCAAGGCTTACTGATAGCAGCCTTGGGAATGAAACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102677.11 |
||
| CDS TCA 72 bp | AATACTTTGGTCTGTTTTCTACCTCACAAGTGCAGGTaGCCCTTCGAGGGTGAGGGGCTTCCTGCTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: NTLVCFLPHKCR*PFEGEGLPAAA Trigger: AGCTGCAGCAGGAAGCCCCTCACCCTCGAAGGGTCACCTGCACTTGTGAGGTAGAAAACAGACCAAAGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112024.10 ENSMUST00000139252.2 ENSMUST00000166199.9 |
||
| CDS TCA 72 bp | AGCAAAGAGTTTCAGAGGTTGCCAGATTGTCACAGATaGCTTTTGAGAGCCCAGTTTCATTCCCAAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SKEFQRLPDCHR*LLRAQFHSQGC Trigger: GCAGCCTTGGGAATGAAACTGGGCTCTCAAAAGTCATCTGTGACAATCTGGCAACCTCTGAAACTCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102677.11 |
||
| CDS CAA 90 bp | GTGATGTCAACTGCGAATAAGCAAAGAGTTTCAGAGGTTGCCAGATaGTCACAGATGACTTTTGAGAGCCCAGTTTCATTCCCAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VMSTANKQRVSEVAR*SQMTFESPVSFPRL Trigger: CAGCCTTGGGAATGAAACTGGGCTCTCAAAAGTCATCTGTGACAATCTGGCAACCTCTGAAACTCTTTGCTTATTCGCAGTTGACATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102677.11 |
||
| CDS TCA 72 bp | AGTTTCAGAGGTTGCCAGATTGTCACAGATGACTTTTaGGAGCCCAGTTTCATTCCCAAGGCTGCTATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SFRGCQIVTDDF*EPSFIPKAAIS Trigger: ACTGATAGCAGCCTTGGGAATGAAACTGGGCTCTCAAAAGTCATCTGTGACAATCTGGCAACCTCTGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102677.11 |
||