Pregenerated sensors for CHMP7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034190Ensembl transcript IDs: ENSMUST00000036381.10
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATCTACTTCTGCCTGTCCTACAGTTCCTGGAGTCACAGATGTGCTaGCCGGCAGGAGGCAGCACGCAGCAGATGCGGCAGGTCAGCGCC | + |
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Preference number: 1 (lower is better) Translates to: DLLLPVLQFLESQMC*PAGGSTQQMRQVSA Trigger: GGCGCTGACCTGCCGCATCTGCTGCGTGCTGCCTCCTGCCGGCCAGCACATCTGTGACTCCAGGAACTGTAGGACAGGCAGAAGTAGATC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR GCA 90 bp | TCAGATCTACTTCTGCCTGTCCTACAGTTCCTGGAGTCACAGATGTaGTGGCCGGCAGGAGGCAGCACGCAGCAGATGCGGCAGGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: SDLLLPVLQFLESQM*WPAGGSTQQMRQVS Trigger: GCTGACCTGCCGCATCTGCTGCGTGCTGCCTCCTGCCGGCCAGCACATCTGTGACTCCAGGAACTGTAGGACAGGCAGAAGTAGATCTGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR CCA 90 bp | AAGAGGTCCAGGCAGCCACCGTCCCTGGGCAGCAGACTGGCAGTGTaGCTGTCATGTCTCTTCTCCATGCTGCCCCCAGAGCATTCAGAT | + |
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Preference number: 1 (lower is better) Translates to: KRSRQPPSLGSRLAV*LSCLFSMLPPEHSD Trigger: ATCTGAATGCTCTGGGGGCAGCATGGAGAAGAGACATGACAGCCACACTGCCAGTCTGCTGCCCAGGGACGGTGGCTGCCTGGACCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR CCA 90 bp | TGCCCCCAGAGCATTCAGATCTACTTCTGCCTGTCCTACAGTTCCTaGAGTCACAGATGTGCTGGCCGGCAGGAGGCAGCACGCAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: CPQSIQIYFCLSYSS*SHRCAGRQEAARSR Trigger: TCTGCTGCGTGCTGCCTCCTGCCGGCCAGCACATCTGTGACTCCAGGAACTGTAGGACAGGCAGAAGTAGATCTGAATGCTCTGGGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR GCA 90 bp | CCCTGGGCAGCAGACTGGCAGTGTGGCTGTCATGTCTCTTCTCCATaGTGCCCCCAGAGCATTCAGATCTACTTCTGCCTGTCCTACAGT | + |
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Preference number: 1 (lower is better) Translates to: PWAADWQCGCHVSSP*CPQSIQIYFCLSYS Trigger: ACTGTAGGACAGGCAGAAGTAGATCTGAATGCTCTGGGGGCAGCATGGAGAAGAGACATGACAGCCACACTGCCAGTCTGCTGCCCAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR GCA 90 bp | CATGTCTCTTCTCCATGCTGCCCCCAGAGCATTCAGATCTACTTCTaGCTGTCCTACAGTTCCTGGAGTCACAGATGTGCTGGCCGGCAG | + |
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Preference number: 1 (lower is better) Translates to: HVSSPCCPQSIQIYF*LSYSSWSHRCAGRQ Trigger: CTGCCGGCCAGCACATCTGTGACTCCAGGAACTGTAGGACAGGCAGAAGTAGATCTGAATGCTCTGGGGGCAGCATGGAGAAGAGACATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR GCA 90 bp | TGGGCAGCAGACTGGCAGTGTGGCTGTCATGTCTCTTCTCCATGCTaGCCCCAGAGCATTCAGATCTACTTCTGCCTGTCCTACAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: WAADWQCGCHVSSPC*PQSIQIYFCLSYSS Trigger: GGAACTGTAGGACAGGCAGAAGTAGATCTGAATGCTCTGGGGGCAGCATGGAGAAGAGACATGACAGCCACACTGCCAGTCTGCTGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR GCA 90 bp | CCATTGCCAAGGCTGAGTGGGAGAGACTCTTTGAACAATGATTCGTaGTCCTGGCCTGAGGCAAAGTTCTCCCCTCTGCTCAAGTCACCT | + |
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Preference number: 1 (lower is better) Translates to: PLPRLSGRDSLNNDS*SWPEAKFSPLLKSP Trigger: AGGTGACTTGAGCAGAGGGGAGAACTTTGCCTCAGGCCAGGAGCACGAATCATTGTTCAAAGAGTCTCTCCCACTCAGCCTTGGCAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR CCA 90 bp | CCAAGGCTGAGTGGGAGAGACTCTTTGAACAATGATTCGTGCTCCTaGCCTGAGGCAAAGTTCTCCCCTCTGCTCAAGTCACCTCAAGCA | + |
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Preference number: 1 (lower is better) Translates to: PRLSGRDSLNNDSCS*PEAKFSPLLKSPQA Trigger: TGCTTGAGGTGACTTGAGCAGAGGGGAGAACTTTGCCTCAGGCCAGGAGCACGAATCATTGTTCAAAGAGTCTCTCCCACTCAGCCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR TCA 90 bp | CACACCTTCATAGCATGGCTTCCAGAAGCTGTATCTGTCTTGGCGTaGGCAGCAGCATCCAGATACATCCAAGTGGTTCTTCCCTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: HTFIAWLPEAVSVLA*AAASRYIQVVLPSS Trigger: AGAGGAGGGAAGAACCACTTGGATGTATCTGGATGCTGCTGCTCACGCCAAGACAGATACAGCTTCTGGAAGCCATGCTATGAAGGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR TCA 90 bp | GAACTGTATAAATTGTGGCACTATAAAGACGAGAAGGTAGGTCCATaGCATCACTGGGAGCACACCTTCATAGCATGGCTTCCAGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: ELYKLWHYKDEKVGP*HHWEHTFIAWLPEA Trigger: AGCTTCTGGAAGCCATGCTATGAAGGTGTGCTCCCAGTGATGTCATGGACCTACCTTCTCGTCTTTATAGTGCCACAATTTATACAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGAGGCAAAGTTCTCCCCTCTGCTCAAGTCACCTCAAGCAGGAAGGGCCACCTGGCTCAGGCCCCTaGCCTGAGTGGTGGATACTA | + |
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Preference number: 2 (lower is better) Translates to: GLRQSSPLCSSHLKQEGPPGSGP*PEWWIL Trigger: TAGTATCCACCACTCAGGGCAGGGGCCTGAGCCAGG...TGGCCCTTCCTGCTTGAGGTGACTTGAGCAGAGGGGAGAACTTTGCCTCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGGGCCAGTGCAAAGAGGTCCAGGCAGCCACCGTCCCTGGGCAGCAGACTTGGTGCCCAGTGGCTTaGTCCAGAAAACACATCCTT | + |
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Preference number: 2 (lower is better) Translates to: RKGQCKEVQAATVPGQQTWCPVA*SRKHIL Trigger: AAGGATGTGTTTTCTGGAGCAAGCCACTGGGCACCA...AGTCTGCTGCCCAGGGACGGTGGCTGCCTGGACCTCTTTGCACTGGCCCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGAGGCAAAGTTCTCCCCTCTGCTCAAGTCACCTCAAGCAGGAAGGGCCACATGTCTCTTCTCCATaGTGCCCCCAGAGCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: GLRQSSPLCSSHLKQEGPHVSSP*CPQSIQ Trigger: CTGAATGCTCTGGGGGCAGCATGGAGAAGAGACATG...TGGCCCTTCCTGCTTGAGGTGACTTGAGCAGAGGGGAGAACTTTGCCTCAGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR CCA 90 bp | CTGAGTGGGAGAGACTCTTTGAACAATGATTCGTGCTCCTGGCCTGAGGCAAAGCCCTGGGCAGCAGACTaGCAGTGTGGCTGTCATGTC | + |
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Preference number: 2 (lower is better) Translates to: LSGRDSLNNDSCSWPEAKPWAAD*QCGCHV Trigger: GACATGACAGCCACACTGCCAGTCTGCTGCCCAGGG...CTTTGCCTCAGGCCAGGAGCACGAATCATTGTTCAAAGAGTCTCTCCCACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR TCA 90 bp | GACACTTTCCAGATCCTAACAGGGAGGGAGCCAGTTGAGGGTGATGTGGTGCCCAAGAACTGCAGGCTATaGAGACGACGGGTCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: DTFQILTGREPVEGDVVPKNCRL*RRRVKH Trigger: GTGTTTGACCCGTCGTCTTCATAGCCTGCAGTTCTT...GGGCACCACATCACCCTCAACTGGCTCCCTCCCTGTTAGGATCTGGAAAGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR CAA 90 bp | CACCCCCAGCTATTTCCATTGCCAAGGCTGAGTGGGAGAGACTCTTaGAACAATGATTCGTGCTCCTGGCCTGAGGCAAAGTTCTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: HPQLFPLPRLSGRDS*NNDSCSWPEAKFSP Trigger: AGGGGAGAACTTTGCCTCAGGCCAGGAGCACGAATCATTGTTCAAAGAGTCTCTCCCACTCAGCCTTGGCAATGGAAATAGCTGGGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR TCA 90 bp | CCAGAAAAGCACAGGCTAGGGGAGCAGTTTAAAGACCTCACGAGTGGAAGAGAGGCAAGGCTGCCTCTCTaGTACATGAGGGTCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: PEKHRLGEQFKDLTSGREARLPL*YMRVLH Trigger: GTGAAGGACCCTCATGTATCAGAGAGGCAGCCTTGC...CTCTCTTCCACTCGTGAGGTCTTTAAACTGCTCCCCTAGCCTGTGCTTTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR TCA 90 bp | GCAGCACGCAGCAGATGCGGCAGGTCAGCGCCCTGCCTCTTATTGCACATCCTGTTCTCATGCTCACCTTaGAAAGGCAGATTAATCCTT | + |
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Preference number: 2 (lower is better) Translates to: AARSRCGRSAPCLLLHILFSCSP*KGRLIL Trigger: AAGGATTAATCTGCCTTTTCAAGGTGAGCATGAGAA...CAGGATGTGCAATAAGAGGCAGGGCGCTGACCTGCCGCATCTGCTGCGTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGAGGCAAAGTTCTCCCCTCTGCTCAAGTCACCTCAAGCAGGAAGGGCCAAATGGGGCCAAATCATaGATCCAGCTTCTTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: GLRQSSPLCSSHLKQEGPNGAKS*IQLLSH Trigger: GTGTGAAAGAAGCTGGATTCATGATTTGGCCCCATT...TGGCCCTTCCTGCTTGAGGTGACTTGAGCAGAGGGGAGAACTTTGCCTCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTGGGAGAGACTCTTTGAACAATGATTCGTGCTCCTGGCCTGAGGCAAAGGTATCTGTCTTGGCGTaGGCAGCAGCATCCAGATAC | + |
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Preference number: 2 (lower is better) Translates to: LSGRDSLNNDSCSWPEAKVSVLA*AAASRY Trigger: GTATCTGGATGCTGCTGCTCACGCCAAGACAGATAC...CTTTGCCTCAGGCCAGGAGCACGAATCATTGTTCAAAGAGTCTCTCCCACTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR TCA 90 bp | CCATTCCCAGAAAAGCACAGGCTAGGGGAGCAGTTTAAAGACCTCACGAGTGGACTTCACTGGCTGGAATaGAGCTGGTGGGTGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: PFPEKHRLGEQFKDLTSGLHWLE*SWWVKT Trigger: TGTCTTCACCCACCAGCTTCATTCCAGCCAGTGAAG...TCCACTCGTGAGGTCTTTAAACTGCTCCCCTAGCCTGTGCTTTTCTGGGAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR CCA 90 bp | GATGGGCAGAGCTGCAAACCTTTCACCTTCACTGGCTGGAATGAAGCTGGTGGGCACACCTTCATAGCATaGCTTCCAGAAGCTGTATCT | + |
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Preference number: 2 (lower is better) Translates to: DGQSCKPFTFTGWNEAGGHTFIA*LPEAVS Trigger: AGATACAGCTTCTGGAAGCCATGCTATGAAGGTGTG...CCCACCAGCTTCATTCCAGCCAGTGAAGGTGAAAGGTTTGCAGCTCTGCCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR CCA 90 bp | CTGTCATGTCTCTTCTCCATGCTGCCCCCAGAGCATTCAGATCTACTTCTGCCTCCAGATACATCCAAGTaGTTCTTCCCTCCTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LSCLFSMLPPEHSDLLLPPDTSK*FFPPLP Trigger: TGGAAGAGGAGGGAAGAACCACTTGGATGTATCTGG...AGGCAGAAGTAGATCTGAATGCTCTGGGGGCAGCATGGAGAAGAGACATGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR CCA 90 bp | CCATTCCCAGAAAAGCACAGGCTAGGGGAGCAGTTTAAAGACCTCACGAGTGGAGAACTGTATAAATTGTaGCACTATAAAGACGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: PFPEKHRLGEQFKDLTSGELYKL*HYKDEK Trigger: CTTCTCGTCTTTATAGTGCCACAATTTATACAGTTC...TCCACTCGTGAGGTCTTTAAACTGCTCCCCTAGCCTGTGCTTTTCTGGGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR CCA 72 bp | AGGCAGCCACCGTCCCTGGGCAGCAGACTGGCAGTGTaGCTGTCATGTCTCTTCTCCATGCTGCCCCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: RQPPSLGSRLAV*LSCLFSMLPPE Trigger: CTCTGGGGGCAGCATGGAGAAGAGACATGACAGCCACACTGCCAGTCTGCTGCCCAGGGACGGTGGCTGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR CAA 90 bp | GCAGCACGCAGCAGATGCGGCAGGTCAGCGCCCTGCCTCTTATTGCACATCCTGCAGGGAGGGAGCCAGTaGAGGGTGATGTGGTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: AARSRCGRSAPCLLLHILQGGSQ*RVMWCP Trigger: TGGGCACCACATCACCCTCAACTGGCTCCCTCCCTG...CAGGATGTGCAATAAGAGGCAGGGCGCTGACCTGCCGCATCTGCTGCGTGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR GCA 72 bp | CTTCTGCCTGTCCTACAGTTCCTGGAGTCACAGATGTaGTGGCCGGCAGGAGGCAGCACGCAGCAGATGCGG | + |
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Preference number: 3 (lower is better) Translates to: LLPVLQFLESQM*WPAGGSTQQMR Trigger: CCGCATCTGCTGCGTGCTGCCTCCTGCCGGCCAGCACATCTGTGACTCCAGGAACTGTAGGACAGGCAGAAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR GCA 72 bp | GACTGGCAGTGTGGCTGTCATGTCTCTTCTCCATGCTaGCCCCAGAGCATTCAGATCTACTTCTGCCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: DWQCGCHVSSPC*PQSIQIYFCLS Trigger: GGACAGGCAGAAGTAGATCTGAATGCTCTGGGGGCAGCATGGAGAAGAGACATGACAGCCACACTGCCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR CCA 72 bp | AGCATTCAGATCTACTTCTGCCTGTCCTACAGTTCCTaGAGTCACAGATGTGCTGGCCGGCAGGAGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SIQIYFCLSYSS*SHRCAGRQEAA Trigger: TGCTGCCTCCTGCCGGCCAGCACATCTGTGACTCCAGGAACTGTAGGACAGGCAGAAGTAGATCTGAATGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR GCA 72 bp | AGGCTGAGTGGGAGAGACTCTTTGAACAATGATTCGTaGTCCTGGCCTGAGGCAAAGTTCTCCCCTCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: RLSGRDSLNNDS*SWPEAKFSPLL Trigger: GAGCAGAGGGGAGAACTTTGCCTCAGGCCAGGAGCACGAATCATTGTTCAAAGAGTCTCTCCCACTCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR GCA 72 bp | TCTCCATGCTGCCCCCAGAGCATTCAGATCTACTTCTaGCTGTCCTACAGTTCCTGGAGTCACAGATGTGCT | + |
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Preference number: 3 (lower is better) Translates to: SPCCPQSIQIYF*LSYSSWSHRCA Trigger: AGCACATCTGTGACTCCAGGAACTGTAGGACAGGCAGAAGTAGATCTGAATGCTCTGGGGGCAGCATGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR CCA 72 bp | TCTTGGCGTGAGCAGCAGCATCCAGATACATCCAAGTaGTTCTTCCCTCCTCTTCCAACGACTTCTCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: SWREQQHPDTSK*FFPPLPTTSQC Trigger: ACACTGAGAAGTCGTTGGAAGAGGAGGGAAGAACCACTTGGATGTATCTGGATGCTGCTGCTCACGCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR CCA 72 bp | AGTGGGAGAGACTCTTTGAACAATGATTCGTGCTCCTaGCCTGAGGCAAAGTTCTCCCCTCTGCTCAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: SGRDSLNNDSCS*PEAKFSPLLKS Trigger: TGACTTGAGCAGAGGGGAGAACTTTGCCTCAGGCCAGGAGCACGAATCATTGTTCAAAGAGTCTCTCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR CAA 90 bp | TTCCAGATCCTAACAGGGAGGGAGCCAGTTGAGGGTGATGTGGTGCCCAGTGGCACAGAACTGTATAAATaGTGGCACTATAAAGACGAG | + |
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Preference number: 3 (lower is better) Translates to: FQILTGREPVEGDVVPSGTELYK*WHYKDE Trigger: CTCGTCTTTATAGTGCCACAATTTATACAGTTCTGT...GCCACTGGGCACCACATCACCCTCAACTGGCTCCCTCCCTGTTAGGATCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR-3UTR CAA 90 bp | GTTCTCCCCTCTGCTCAAGTCACCTCAAGCAGGAAGGGCCAGTGCAAAGAGGTCTTTCTCATGCTCACCTaGAAAAGGCAGATTAATCCT | + |
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Preference number: 3 (lower is better) Translates to: VLPSAQVTSSRKGQCKEVFLMLT*KRQINP Trigger: AGGATTAATCTGCCTTTTCAAGGTGAGCATGAGAAA...GACCTCTTTGCACTGGCCCTTCCTGCTTGAGGTGACTTGAGCAGAGGGGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR TCA 72 bp | ATAGCATGGCTTCCAGAAGCTGTATCTGTCTTGGCGTaGGCAGCAGCATCCAGATACATCCAAGTGGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: IAWLPEAVSVLA*AAASRYIQVVL Trigger: AAGAACCACTTGGATGTATCTGGATGCTGCTGCTCACGCCAAGACAGATACAGCTTCTGGAAGCCATGCTAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| 3UTR TCA 72 bp | AAATTGTGGCACTATAAAGACGAGAAGGTAGGTCCATaGCATCACTGGGAGCACACCTTCATAGCATGGCTT | + |
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Preference number: 3 (lower is better) Translates to: KLWHYKDEKVGP*HHWEHTFIAWL Trigger: AAGCCATGCTATGAAGGTGTGCTCCCAGTGATGTCATGGACCTACCTTCTCGTCTTTATAGTGCCACAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR GCA 90 bp | GCCGGCAGGAGGCAGCACGCAGCAGATGCGGCAGGTCAGCGCCCTGCCTCTTATCGACGCAGCAGGTCCTaGAGCACCGTAGCCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: AGRRQHAADAAGQRPASYRRSRS*STVASP Trigger: GGGGCTGGCTACGGTGCTGCAGGACCTGCTGCGTCG...ATAAGAGGCAGGGCGCTGACCTGCCGCATCTGCTGCGTGCTGCCTCCTGCCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR CCA 90 bp | AGGAAGGGCCAGTGCAAAGAGGTCCAGGCAGCCACCGTCCCTGGGCAGCAGACTAGGCGCACCACCCCTTaGCGGCGGCTGTGGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: RKGQCKEVQAATVPGQQTRRTTP*RRLWLS Trigger: GCTGAGCCACAGCCGCCGCCAAGGGGTGGTGCGCCT...AGTCTGCTGCCCAGGGACGGTGGCTGCCTGGACCTCTTTGCACTGGCCCTTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR GCA 90 bp | GTTCTCCCCTCTGCTCAAGTCACCTCAAGCAGGAAGGGCCAGTGCAAAGAGGTCGCCCCAGCGGGACACTaGCCTTGCGCTGGAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VLPSAQVTSSRKGQCKEVAPAGH*PCAGRP Trigger: AGGCCTTCCAGCGCAAGGGCAGTGTCCCGCTGGGGC...GACCTCTTTGCACTGGCCCTTCCTGCTTGAGGTGACTTGAGCAGAGGGGAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR GCA 90 bp | GACACTTTCCAGATCCTAACAGGGAGGGAGCCAGTTGAGGGTGATGTGGTGCCCCAGCTGCTTCTTTCCTaGTCGGCATGCCCGGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: DTFQILTGREPVEGDVVPQLLLS*SACPAG Trigger: GCCCGCCGGGCATGCCGAGCAGGAAAGAAGCAGCTG...GGGCACCACATCACCCTCAACTGGCTCCCTCCCTGTTAGGATCTGGAAAGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR GCA 90 bp | GCAGCACGCAGCAGATGCGGCAGGTCAGCGCCCTGCCTCTTATTGCACATCCTGGTGTCCAGCTTGGCATaGAGGGCCTCAATGCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: AARSRCGRSAPCLLLHILVSSLA*RASMRF Trigger: GAAACGCATTGAGGCCCTGCATGCCAAGCTGGACAC...CAGGATGTGCAATAAGAGGCAGGGCGCTGACCTGCCGCATCTGCTGCGTGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR CCA 90 bp | AGGAAGGGCCAGTGCAAAGAGGTCCAGGCAGCCACCGTCCCTGGGCAGCAGACTTCACAGGAGATACCTTaGCATGTGGTCCCCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: RKGQCKEVQAATVPGQQTSQEIP*HVVPWQ Trigger: TTGCCAGGGGACCACATGCCAAGGTATCTCCTGTGA...AGTCTGCTGCCCAGGGACGGTGGCTGCCTGGACCTCTTTGCACTGGCCCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR GCA 90 bp | GTTCTCCCCTCTGCTCAAGTCACCTCAAGCAGGAAGGGCCAGTGCAAAGAGGTCAAGTCTGACTCTCGCTaGAGCTCGCCTCGACGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VLPSAQVTSSRKGQCKEVKSDSR*SSPRRS Trigger: GCTGCGTCGAGGCGAGCTGCAGCGAGAGTCAGACTT...GACCTCTTTGCACTGGCCCTTCCTGCTTGAGGTGACTTGAGCAGAGGGGAGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR GCA 90 bp | AGGAAGGGCCAGTGCAAAGAGGTCCAGGCAGCCACCGTCCCTGGGCAGCAGACTAGATGCGATCCAGGATaGCTTGAACAGTGTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RKGQCKEVQAATVPGQQTRCDPG*LEQCPA Trigger: AGCTGGACACTGTTCAAGGCATCCTGGATCGCATCT...AGTCTGCTGCCCAGGGACGGTGGCTGCCTGGACCTCTTTGCACTGGCCCTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR CCA 90 bp | CCAGAAAAGCACAGGCTAGGGGAGCAGTTTAAAGACCTCACGAGTGGAAGAGAGCCTTGGCGGCGGCTGTaGCTCAGCACCAACGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PEKHRLGEQFKDLTSGREPWRRL*LSTNGA Trigger: GGCTCCGTTGGTGCTGAGCCACAGCCGCCGCCAAGG...CTCTCTTCCACTCGTGAGGTCTTTAAACTGCTCCCCTAGCCTGTGCTTTTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR GCA 90 bp | GAGAGGGCTAGCTTAGATGGGCAGAGCTGCAAACCTTTCACCTTCACTGGCTGGTGCTGTCCCAGTCGGTaGTGTTCACCTCGCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERASLDGQSCKPFTFTGWCCPSR*CSPRDS Trigger: GGAGTCGCGAGGTGAACAGCACCGACTGGGACAGCA...CCAGCCAGTGAAGGTGAAAGGTTTGCAGCTCTGCCCATCTAAGCTAGCCCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | CCAGAAAAGCACAGGCTAGGGGAGCAGTTTAAAGACCTCACGAGTGGAAGAGAGCGCTGGAAGGCCTCCTaGAAGTCCCGCAGTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PEKHRLGEQFKDLTSGRERWKAS*KSRSRR Trigger: CCTGCGACTGCGGGACTTGCAGGAGGCCTTCCAGCG...CTCTCTTCCACTCGTGAGGTCTTTAAACTGCTCCCCTAGCCTGTGCTTTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | GGTAGGTCCATGACATCACTGGGAGCACACCTTCATAGCATGGCTTCCAGAAGCCTTTCCTGCTCGGCATaGCCGGCGGGCTTCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRSMTSLGAHLHSMASRSLSCSA*PAGFLF Trigger: AAAGAGGAAGCCCGCCGGGCATGCCGAGCAGGAAAG...GCTTCTGGAAGCCATGCTATGAAGGTGTGCTCCCAGTGATGTCATGGACCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGACTGGCAGTGTGGCTGTCATGTCTCTTCTCCATGCTGCCCCCAGAGCATGACCTCAGTGCCAGCTaGTTCTTTCCTGCTCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRLAVWLSCLFSMLPPEHDLSAS*FFPARH Trigger: ATGCCGAGCAGGAAAGAAGCAGCTGGCACTGAGGTC...ATGCTCTGGGGGCAGCATGGAGAAGAGACATGACAGCCACACTGCCAGTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGACTGGCAGTGTGGCTGTCATGTCTCTTCTCCATGCTGCCCCCAGAGCATGAACAGTGTCCAGCTTaGCATGCAGGGCCTCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLAVWLSCLFSMLPPEHEQCPA*HAGPQC Trigger: GCATTGAGGCCCTGCATGCCAAGCTGGACACTGTTC...ATGCTCTGGGGGCAGCATGGAGAAGAGACATGACAGCCACACTGCCAGTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CCA 90 bp | GCCGGCAGGAGGCAGCACGCAGCAGATGCGGCAGGTCAGCGCCCTGCCTCTTATCTCCAATTGCCTTTTTaGAGATTTACTGCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGRRQHAADAAGQRPASYLQLPF*RFTAWD Trigger: ATCCCAAGCAGTAAATCTCCAAAAAGGCAATTGGAG...ATAAGAGGCAGGGCGCTGACCTGCCGCATCTGCTGCGTGCTGCCTCCTGCCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | GGCCTGAGGCAAAGTTCTCCCCTCTGCTCAAGTCACCTCAAGCAGGAAGGGCCAAGAACAGAAAAGACATaGGCTCCTCATCCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLRQSSPLCSSHLKQEGPRTEKT*APHPPP Trigger: GGGAGGAGGATGAGGAGCGCATGTCTTTTCTGTTCT...TGGCCCTTCCTGCTTGAGGTGACTTGAGCAGAGGGGAGAACTTTGCCTCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGACTGGCAGTGTGGCTGTCATGTCTCTTCTCCATGCTGCCCCCAGAGCATCTTGAGAGACCTCAGTaGCAGCTGCTTCTTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLAVWLSCLFSMLPPEHLERPQ*QLLLSC Trigger: GCAGGAAAGAAGCAGCTGGCACTGAGGTCTCTCAAG...ATGCTCTGGGGGCAGCATGGAGAAGAGACATGACAGCCACACTGCCAGTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | GTTCTCCCCTCTGCTCAAGTCACCTCAAGCAGGAAGGGCCAGTGCAAAGAGGTCCATGCAGGGCCTCAATaGGTTTCTCTGTCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLPSAQVTSSRKGQCKEVHAGPQ*VSLSSA Trigger: AGCAGAGGACAGAGAAACGCATTGAGGCCCTGCATG...GACCTCTTTGCACTGGCCCTTCCTGCTTGAGGTGACTTGAGCAGAGGGGAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | GGCCTGAGGCAAAGTTCTCCCCTCTGCTCAAGTCACCTCAAGCAGGAAGGGCCATCTGGGAGGCATAGATaGGATCCAGGATGCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLRQSSPLCSSHLKQEGPSGRHR*DPGCLE Trigger: TTCAAGGCATCCTGGATCGCATCTATGCCTCCCAGA...TGGCCCTTCCTGCTTGAGGTGACTTGAGCAGAGGGGAGAACTTTGCCTCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR TCA 90 bp | GTTCTCCCCTCTGCTCAAGTCACCTCAAGCAGGAAGGGCCAGTGCAAAGAGGTCTCCGCTGGAACTTTGTaGTCCCCCAGCATGTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLPSAQVTSSRKGQCKEVSAGTL*SPSMLE Trigger: TTCTAACATGCTGGGGGATCACAAAGTTCCAGCGGA...GACCTCTTTGCACTGGCCCTTCCTGCTTGAGGTGACTTGAGCAGAGGGGAGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CCA 90 bp | TTAATCCTTTCCCCCACTCCATCAGCAGATCTACTTCTAAGATGGAAGCGGTTGAGGGCCACCACAGGGTaGGAGGAGAGGGGCGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LILSPTPSADLLLRWKRLRATTG*EERGEF Trigger: GAACTCGCCCCTCTCCTCCCACCCTGTGGTGGCCCT...CAACCGCTTCCATCTTAGAAGTAGATCTGCTGATGGAGTGGGGGAAAGGATTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CCA 90 bp | TTCCAGATCCTAACAGGGAGGGAGCCAGTTGAGGGTGATGTGGTGCCCAGTGGCTGGCATGTGGTCCCCTaGCAAACTTCACAATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FQILTGREPVEGDVVPSGWHVVP*QTSQSS Trigger: AGAAGATTGTGAAGTTTGCCAGGGGACCACATGCCA...GCCACTGGGCACCACATCACCCTCAACTGGCTCCCTCCCTGTTAGGATCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR TCA 90 bp | CCAATGGCAAGAACTGCAGGCTATGAAGACGACGGGTCAAACACAGAACTGTATACTGGCCATGAAGTCTaGCTCTCGCTGCAGCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PMARTAGYEDDGSNTELYTGHEV*LSLQLA Trigger: GGCGAGCTGCAGCGAGAGTCAGACTTCATGGCCAGT...ATACAGTTCTGTGTTTGACCCGTCGTCTTCATAGCCTGCAGTTCTTGCCATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR TCA 90 bp | GAACCATCTTCCGGACAGTGTTTCTCCAGACTCAGCTGTTGGGTCTCTCTGAATTGTCCACACTGGCCATaGAGTCTGACTCTCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPSSGQCFSRLSCWVSLNCPHWP*SLTLAA Trigger: TGCAGCGAGAGTCAGACTTCATGGCCAGTGTGGACA...ATTCAGAGAGACCCAACAGCTGAGTCTGGAGAAACACTGTCCGGAAGATGGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CCA 90 bp | GAACCATCTTCCGGACAGTGTTTCTCCAGACTCAGCTGTTGGGTCTCTCTGAATGAGAGGGGCGAGTTCTaGTATAGGCGATACACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EPSSGQCFSRLSCWVSLNERGEF*YRRYTS Trigger: GGAGGTGTATCGCCTATACCAGAACTCGCCCCTCTC...ATTCAGAGAGACCCAACAGCTGAGTCTGGAGAAACACTGTCCGGAAGATGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CCA 90 bp | TTCCAGATCCTAACAGGGAGGGAGCCAGTTGAGGGTGATGTGGTGCCCAGTGGCCAAAATCTAAACCATTaGTTACTCCACCAGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FQILTGREPVEGDVVPSGQNLNH*LLHQPE Trigger: CTCTGGCTGGTGGAGTAACCAATGGTTTAGATTTTG...GCCACTGGGCACCACATCACCCTCAACTGGCTCCCTCCCTGTTAGGATCTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR TCA 90 bp | CTGAGTGGGAGAGACTCTTTGAACAATGATTCGTGCTCCTGGCCTGAGGCAAAGTCTGCTCCAAGACAGTaGCTCTCTTCTCCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSGRDSLNNDSCSWPEAKSAPRQ*LSSPSA Trigger: TGCAGAAGGAGAAGAGAGTCACTGTCTTGGAGCAGA...CTTTGCCTCAGGCCAGGAGCACGAATCATTGTTCAAAGAGTCTCTCCCACTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR TCA 90 bp | GAACCATCTTCCGGACAGTGTTTCTCCAGACTCAGCTGTTGGGTCTCTCTGAATCAAAGCTCCTGGATCTaGTCCACAAGGCTCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPSSGQCFSRLSCWVSLNQSSWI*STRLSA Trigger: AGCAGAGAGCCTTGTGGATCAGATCCAGGAGCTTTG...ATTCAGAGAGACCCAACAGCTGAGTCTGGAGAAACACTGTCCGGAAGATGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | CCAATGGCAAGAACTGCAGGCTATGAAGACGACGGGTCAAACACAGAACTGTATACTCTCTTCTCCTTCTaGAGCTGCAGCAGCACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PMARTAGYEDDGSNTELYTLFSF*SCSSTR Trigger: CCTCGTGCTGCTGCAGCTGCAGAAGGAGAAGAGAGT...ATACAGTTCTGTGTTTGACCCGTCGTCTTCATAGCCTGCAGTTCTTGCCATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | CCAATGGCAAGAACTGCAGGCTATGAAGACGACGGGTCAAACACAGAACTGTATTTCCGAGAGAGGAGCTaGTCACTCTGCATCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PMARTAGYEDDGSNTELYFRERS*SLCISW Trigger: CCAGCTGATGCAGAGTGAGCAGCTCCTCTCTCGGAA...ATACAGTTCTGTGTTTGACCCGTCGTCTTCATAGCCTGCAGTTCTTGCCATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | GGTAGGTCCATGACATCACTGGGAGCACACCTTCATAGCATGGCTTCCAGAAGCATCCACAAGGCTCTCTaGTTTCTCCACTGTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: GRSMTSLGAHLHSMASRSIHKAL*FLHCDI Trigger: GATGTCACAGTGGAGAAAGCAGAGAGCCTTGTGGAT...GCTTCTGGAAGCCATGCTATGAAGGTGTGCTCCCAGTGATGTCATGGACCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CCA 90 bp | CTGAGTGGGAGAGACTCTTTGAACAATGATTCGTGCTCCTGGCCTGAGGCAAAGAGATACCTTGGCATGTaGTCCCCTGGCAAACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSGRDSLNNDSCSWPEAKRYLGM*SPGKLH Trigger: GTGAAGTTTGCCAGGGGACCACATGCCAAGGTATCT...CTTTGCCTCAGGCCAGGAGCACGAATCATTGTTCAAAGAGTCTCTCCCACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | CCAATGGCAAGAACTGCAGGCTATGAAGACGACGGGTCAAACACAGAACTGTATCGTTTCTCTGTCCTCTaGTTGGCCTTGAGAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PMARTAGYEDDGSNTELYRFSVL*LALRDL Trigger: GAGGTCTCTCAAGGCCAAGCAGAGGACAGAGAAACG...ATACAGTTCTGTGTTTGACCCGTCGTCTTCATAGCCTGCAGTTCTTGCCATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | CTGAGTGGGAGAGACTCTTTGAACAATGATTCGTGCTCCTGGCCTGAGGCAAAGATCTTCTCTCCATTCTaGTCCAAGACAGTGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSGRDSLNNDSCSWPEAKIFSPF*SKTVTL Trigger: GAGAGTCACTGTCTTGGAGCAGAATGGAGAGAAGAT...CTTTGCCTCAGGCCAGGAGCACGAATCATTGTTCAAAGAGTCTCTCCCACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CCA 90 bp | AAGACGACGGGTCAAACACAGAACTGTATAAATTGTGGCACTATAAAGACGAGAACACTGCCCTTGCGCTaGAAGGCCTCCTGCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTTGQTQNCINCGTIKTRTLPLR*KASCKS Trigger: GGACTTGCAGGAGGCCTTCCAGCGCAAGGGCAGTGT...TCTCGTCTTTATAGTGCCACAATTTATACAGTTCTGTGTTTGACCCGTCGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CCA 90 bp | CGGGGCCTAGGGTTTGTGTTTCTCATGCTCACCTTGAAAAGGCAGATTAATCCTTCAAAGGTTCTGTGGTaGTGTCCTGAAGGAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RGLGFVFLMLTLKRQINPSKVLW*CPEGGC Trigger: ACATCCTCCTTCAGGACACCACCACAGAACCTTTGA...AGGATTAATCTGCCTTTTCAAGGTGAGCATGAGAAACACAAACCCTAGGCCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR TCA 90 bp | AAGACGACGGGTCAAACACAGAACTGTATAAATTGTGGCACTATAAAGACGAGACGATCCAGGATGCCTTaGACAGTGTCCAGCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTTGQTQNCINCGTIKTRRSRMP*TVSSLA Trigger: TGCCAAGCTGGACACTGTTCAAGGCATCCTGGATCG...TCTCGTCTTTATAGTGCCACAATTTATACAGTTCTGTGTTTGACCCGTCGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR TCA 90 bp | AAGACGACGGGTCAAACACAGAACTGTATAAATTGTGGCACTATAAAGACGAGATCTGTGGTGGTGTCCTaGAGGAGGATGTCCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTTGQTQNCINCGTIKTRSVVVS*RRMSNS Trigger: GGAGTTGGACATCCTCCTTCAGGACACCACCACAGA...TCTCGTCTTTATAGTGCCACAATTTATACAGTTCTGTGTTTGACCCGTCGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | TCAAACACAGAACTGTATAAATTGTGGCACTATAAAGACGAGAAGGTAGGTCCACCCAGAAGCCCATCTTaGTGTCCCAGTCGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNTELYKLWHYKDEKVGPPRSPS*CPSRCC Trigger: ACAGCACCGACTGGGACAGCAAGATGGGCTTCTGGG...TGGACCTACCTTCTCGTCTTTATAGTGCCACAATTTATACAGTTCTGTGTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | GGTAGGTCCATGACATCACTGGGAGCACACCTTCATAGCATGGCTTCCAGAAGCTTTTTGGAGATTTACTaGTTGGGATCAAACCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRSMTSLGAHLHSMASRSFLEIY*LGSNLL Trigger: AAGGAGGTTTGATCCCAAGCAGTAAATCTCCAAAAA...GCTTCTGGAAGCCATGCTATGAAGGTGTGCTCCCAGTGATGTCATGGACCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR GCA 90 bp | CTGAGTGGGAGAGACTCTTTGAACAATGATTCGTGCTCCTGGCCTGAGGCAAAGAGAGTTGGCTCCAATTaGCTTTTTGGAGATTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGRDSLNNDSCSWPEAKRVGSN*LFGDLL Trigger: CAGTAAATCTCCAAAAAGGCAATTGGAGCCAACTCT...CTTTGCCTCAGGCCAGGAGCACGAATCATTGTTCAAAGAGTCTCTCCCACTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CCA 90 bp | TCAAACACAGAACTGTATAAATTGTGGCACTATAAAGACGAGAAGGTAGGTCCACACCTCTCAGACTCTTaGGATAAAGACTCGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNTELYKLWHYKDEKVGPHLSDS*DKDSTF Trigger: GAAGGTCGAGTCTTTATCCCAAGAGTCTGAGAGGTG...TGGACCTACCTTCTCGTCTTTATAGTGCCACAATTTATACAGTTCTGTGTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS CCA 90 bp | TGGAAGGCCTCCTGCAAGTCCCGCAGTCGCAGGCGCACCACCCCTTaGCGGCGGCTGTGGCTCAGCACCAACGGAGCCCAGAAGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: WKASCKSRSRRRTTP*RRLWLSTNGAQKPI Trigger: GATGGGCTTCTGGGCTCCGTTGGTGCTGAGCCACAGCCGCCGCCAAGGGGTGGTGCGCCTGCGACTGCGGGACTTGCAGGAGGCCTTCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS CCA 90 bp | GAGTTGGCGCACAGAGCACTCAGCTCTGACAGGGCCACCACAGGGTaGGAGGAGAGGGGCGAGTTCTGGTATAGGCGATACACCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ELAHRALSSDRATTG*EERGEFWYRRYTSS Trigger: CGAGGAGGTGTATCGCCTATACCAGAACTCGCCCCTCTCCTCCCACCCTGTGGTGGCCCTGTCAGAGCTGAGTGCTCTGTGCGCCAACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CAA 90 bp | CACGCAGCAGATGCGGCAGGTCAGCGCCCTGCCTCTTATTGCACATCCTGGCTCGCGATCCAGGATGCCTaGAACAGTGTCCAGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HAADAAGQRPASYCTSWLAIQDA*NSVQLG Trigger: GCCAAGCTGGACACTGTTCAAGGCATCCTGGATCGC...GAGCCAGGATGTGCAATAAGAGGCAGGGCGCTGACCTGCCGCATCTGCTGCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS CCA 90 bp | GCTCGGCATGCCCGGCGGGCTTCCTCTTTGCACCTCTCAGACTCTTaGGATAAAGACTCGACCTTCCGAGAGAGGAGCTGCTCACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARHARRASSLHLSDS*DKDSTFRERSCSLC Trigger: GCAGAGTGAGCAGCTCCTCTCTCGGAAGGTCGAGTCTTTATCCCAAGAGTCTGAGAGGTGCAAAGAGGAAGCCCGCCGGGCATGCCGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CAA 90 bp | GCCGGCAGGAGGCAGCACGCAGCAGATGCGGCAGGTCAGCGCCCTGCCTCTTATCTGAGAAACTTCATCTaGCGTGTCACAAAGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGRRQHAADAAGQRPASYLRNFI*RVTKLL Trigger: CAGGAGCTTTGTGACACGCAAGATGAAGTTTCTCAG...ATAAGAGGCAGGGCGCTGACCTGCCGCATCTGCTGCGTGCTGCCTCCTGCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CAA 90 bp | GTCATGTCTCTTCTCCATGCTGCCCCCAGAGCATTCAGATCTACTTCTGCCTGTAGCGGGACACTGCCCTaGCGCTGGAAGGCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VMSLLHAAPRAFRSTSACSGTLP*RWKASC Trigger: GCAGGAGGCCTTCCAGCGCAAGGGCAGTGTCCCGCT...ACAGGCAGAAGTAGATCTGAATGCTCTGGGGGCAGCATGGAGAAGAGACATGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS GCA 90 bp | CCAGCTGCTTCTTTCCTGCTCGGCATGCCCGGCGGGCTTCCTCTTTaGACCTCTCAGACTCTTGGGATAAAGACTCGACCTTCCGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PAASFLLGMPGGLPL*TSQTLGIKTRPSER Trigger: TCTCTCGGAAGGTCGAGTCTTTATCCCAAGAGTCTGAGAGGTGCAAAGAGGAAGCCCGCCGGGCATGCCGAGCAGGAAAGAAGCAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS TCA 90 bp | TTCAGCAGCTCCACAGCCACCAGCACCTCCTCCGCTGGAACTTTGTaGTCCCCCAGCATGTTAGAAAGAGTCCACTTGAGGGGCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSSSTATSTSSAGTL*SPSMLERVHLRGFS Trigger: GCTGAAGCCCCTCAAGTGGACTCTTTCTAACATGCTGGGGGATCACAAAGTTCCAGCGGAGGAGGTGCTGGTGGCTGTGGAGCTGCTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS CCA 90 bp | GGGAGGCATAGATGCGATCCAGGATGCCTTGAACAGTGTCCAGCTTaGCATGCAGGGCCTCAATGCGTTTCTCTGTCCTCTGCTTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GRHRCDPGCLEQCPA*HAGPQCVSLSSAWP Trigger: AGGCCAAGCAGAGGACAGAGAAACGCATTGAGGCCCTGCATGCCAAGCTGGACACTGTTCAAGGCATCCTGGATCGCATCTATGCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS CCA 90 bp | GGCCTTTTCCTTCAGCAGCTCCACAGCCACCAGCACCTCCTCCGCTaGAACTTTGTGATCCCCCAGCATGTTAGAAAGAGTCCACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLFLQQLHSHQHLLR*NFVIPQHVRKSPLE Trigger: CTCAAGTGGACTCTTTCTAACATGCTGGGGGATCACAAAGTTCCAGCGGAGGAGGTGCTGGTGGCTGTGGAGCTGCTGAAGGAAAAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CAA 90 bp | CTGAGTGGGAGAGACTCTTTGAACAATGATTCGTGCTCCTGGCCTGAGGCAAAGGTCCTCTGCTTGGCCTaGAGAGACCTCAGTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSGRDSLNNDSCSWPEAKVLCLA*RDLSAS Trigger: GCTGGCACTGAGGTCTCTCAAGGCCAAGCAGAGGAC...CTTTGCCTCAGGCCAGGAGCACGAATCATTGTTCAAAGAGTCTCTCCCACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS-3UTR CAA 90 bp | TTAATCCTTTCCCCCACTCCATCAGCAGATCTACTTCTAAGATGGAAGCGGTTGGCCCAGAAGCCCATCTaGCTGTCCCAGTCGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LILSPTPSADLLLRWKRLAQKPI*LSQSVL Trigger: CAGCACCGACTGGGACAGCAAGATGGGCTTCTGGGC...CAACCGCTTCCATCTTAGAAGTAGATCTGCTGATGGAGTGGGGGAAAGGATTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
||
| CDS TCA 90 bp | CCCTGGCAAACTTCACAATCTTCTCTCCATTCTGCTCCAAGACAGTaGCTCTCTTCTCCTTCTGCAGCTGCAGCAGCACGAGGTAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PWQTSQSSLHSAPRQ*LSSPSAAAAARGRR Trigger: CCTTCTACCTCGTGCTGCTGCAGCTGCAGAAGGAGAAGAGAGTCACTGTCTTGGAGCAGAATGGAGAGAAGATTGTGAAGTTTGCCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS TCA 90 bp | AAAGCTCCTGGATCTGATCCACAAGGCTCTCTGCTTTCTCCACTGTaGCATCCTTCATGGAGAGTTTCAAGGCTCCCACACCAGCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: KAPGSDPQGSLLSPL*HPSWRVSRLPHQLG Trigger: ACCAAGCTGGTGTGGGAGCCTTGAAACTCTCCATGAAGGATGTCACAGTGGAGAAAGCAGAGAGCCTTGTGGATCAGATCCAGGAGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CCA 90 bp | GTAGACCCCAACATCCACGTCGTTCACAGGAGATACCTTGGCATGTaGTCCCCTGGCAAACTTCACAATCTTCTCTCCATTCTGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: VDPNIHVVHRRYLGM*SPGKLHNLLSILLQ Trigger: TTGGAGCAGAATGGAGAGAAGATTGTGAAGTTTGCCAGGGGACCACATGCCAAGGTATCTCCTGTGAACGACGTGGATGTTGGGGTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR CAA 90 bp | GAGAGGGCTAGCTTAGATGGGCAGAGCTGCAAACCTTTCACCTTCACTGGCTGGTTGGAGATTTACTGCTaGGGATCAAACCTCCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: ERASLDGQSCKPFTFTGWLEIYC*GSNLLL Trigger: CAGAAGGAGGTTTGATCCCAAGCAGTAAATCTCCAA...CCAGCCAGTGAAGGTGAAAGGTTTGCAGCTCTGCCCATCTAAGCTAGCCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS GCA 90 bp | ATCTTGCGTGTCACAAAGCTCCTGGATCTGATCCACAAGGCTCTCTaGTTTCTCCACTGTGACATCCTTCATGGAGAGTTTCAAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: ILRVTKLLDLIHKAL*FLHCDILHGEFQGS Trigger: GGAGCCTTGAAACTCTCCATGAAGGATGTCACAGTGGAGAAAGCAGAGAGCCTTGTGGATCAGATCCAGGAGCTTTGTGACACGCAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR CAA 90 bp | CAGCAGCATCCAGATACATCCAAGTGGTTCTTCCCTCCTCTTCCAACGACTTCTGGCTCCCACACCAGCTaGGTAGGCATTAAAAACCAT | + |
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Preference number: 5 (lower is better) Translates to: QQHPDTSKWFFPPLPTTSGSHTS*VGIKNH Trigger: ATGGTTTTTAATGCCTACCAAGCTGGTGTGGGAGCC...AGAAGTCGTTGGAAGAGGAGGGAAGAACCACTTGGATGTATCTGGATGCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR CAA 90 bp | CCAATGGCAAGAACTGCAGGCTATGAAGACGACGGGTCAAACACAGAACTGTATTTAGAAAGAGTCCACTaGAGGGGCTTCAGCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: PMARTAGYEDDGSNTELYLERVH*RGFSRK Trigger: CTTCCTGCTGAAGCCCCTCAAGTGGACTCTTTCTAA...ATACAGTTCTGTGTTTGACCCGTCGTCTTCATAGCCTGCAGTTCTTGCCATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR CAA 90 bp | AAGACGACGGGTCAAACACAGAACTGTATAAATTGTGGCACTATAAAGACGAGACGGCGGGCTTCCTCTTaGCACCTCTCAGACTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: KTTGQTQNCINCGTIKTRRRASS*HLSDSW Trigger: CCAAGAGTCTGAGAGGTGCAAAGAGGAAGCCCGCCG...TCTCGTCTTTATAGTGCCACAATTTATACAGTTCTGTGTTTGACCCGTCGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR CAA 90 bp | GCCCAGTGGCTTGCTCCAGAAAACACATCCTTTATAATGGGGCCAAATCATGAATTCTCTGTCCTCTGCTaGGCCTTGAGAGACCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: AQWLAPENTSFIMGPNHEFSVLC*ALRDLS Trigger: ACTGAGGTCTCTCAAGGCCAAGCAGAGGACAGAGAA...TTCATGATTTGGCCCCATTATAAAGGATGTGTTTTCTGGAGCAAGCCACTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR CAA 90 bp | CAGCAGCATCCAGATACATCCAAGTGGTTCTTCCCTCCTCTTCCAACGACTTCTGCTCCAATTGCCTTTTaGGAGATTTACTGCTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: QQHPDTSKWFFPPLPTTSAPIAF*EIYCLG Trigger: TCCCAAGCAGTAAATCTCCAAAAAGGCAATTGGAGC...AGAAGTCGTTGGAAGAGGAGGGAAGAACCACTTGGATGTATCTGGATGCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS-3UTR CAA 90 bp | CAGCAGCATCCAGATACATCCAAGTGGTTCTTCCCTCCTCTTCCAACGACTTCTTCAAAATCTAAACCATaGGTTACTCCACCAGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: QQHPDTSKWFFPPLPTTSSKSKP*VTPPAR Trigger: TCTGGCTGGTGGAGTAACCAATGGTTTAGATTTTGA...AGAAGTCGTTGGAAGAGGAGGGAAGAACCACTTGGATGTATCTGGATGCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS GCA 72 bp | CCCAGCGGGACACTGCCCTTGCGCTGGAAGGCCTCCTaGAAGTCCCGCAGTCGCAGGCGCACCACCCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: PSGTLPLRWKAS*KSRSRRRTTPW Trigger: CCAAGGGGTGGTGCGCCTGCGACTGCGGGACTTGCAGGAGGCCTTCCAGCGCAAGGGCAGTGTCCCGCTGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CCA 72 bp | TCCTGCAAGTCCCGCAGTCGCAGGCGCACCACCCCTTaGCGGCGGCTGTGGCTCAGCACCAACGGAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SCKSRSRRRTTP*RRLWLSTNGAQ Trigger: CTGGGCTCCGTTGGTGCTGAGCCACAGCCGCCGCCAAGGGGTGGTGCGCCTGCGACTGCGGGACTTGCAGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CAA 90 bp | CTGGAAGGCCTCCTGCAAGTCCCGCAGTCGCAGGCGCACCACCCCTaGGCGGCGGCTGTGGCTCAGCACCAACGGAGCCCAGAAGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LEGLLQVPQSQAHHP*AAAVAQHQRSPEAH Trigger: ATGGGCTTCTGGGCTCCGTTGGTGCTGAGCCACAGCCGCCGCCAAGGGGTGGTGCGCCTGCGACTGCGGGACTTGCAGGAGGCCTTCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS GCA 72 bp | CTGCTGTCCACACTGGCCATGAAGTCTGACTCTCGCTaGAGCTCGCCTCGACGCAGCAGGTCCTGCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: LLSTLAMKSDSR*SSPRRSRSCST Trigger: GGTGCTGCAGGACCTGCTGCGTCGAGGCGAGCTGCAGCGAGAGTCAGACTTCATGGCCAGTGTGGACAGCAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CAA 90 bp | TGGCGGCGGCTGTGGCTCAGCACCAACGGAGCCCAGAAGCCCATCTaGCTGTCCCAGTCGGTGCTGTTCACCTCGCGACTCCTCTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: WRRLWLSTNGAQKPI*LSQSVLFTSRLLLK Trigger: CTTTAAGAGGAGTCGCGAGGTGAACAGCACCGACTGGGACAGCAAGATGGGCTTCTGGGCTCCGTTGGTGCTGAGCCACAGCCGCCGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS GCA 72 bp | TGTGGCTCAGCACCAACGGAGCCCAGAAGCCCATCTTaGTGTCCCAGTCGGTGCTGTTCACCTCGCGACTCC | + |
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Preference number: 6 (lower is better) Translates to: CGSAPTEPRSPS*CPSRCCSPRDS Trigger: GGAGTCGCGAGGTGAACAGCACCGACTGGGACAGCAAGATGGGCTTCTGGGCTCCGTTGGTGCTGAGCCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CCA 72 bp | GCACGAGGTAGAAGGTCCTCTCATCCGGGCAGGAGTTaGCGCACAGAGCACTCAGCTCTGACAGGGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: ARGRRSSHPGRS*RTEHSALTGPP Trigger: TGGTGGCCCTGTCAGAGCTGAGTGCTCTGTGCGCCAACTCCTGCCCGGATGAGAGGACCTTCTACCTCGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CAA 72 bp | CTGTGGCTCAGCACCAACGGAGCCCAGAAGCCCATCTaGCTGTCCCAGTCGGTGCTGTTCACCTCGCGACTC | + |
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Preference number: 6 (lower is better) Translates to: LWLSTNGAQKPI*LSQSVLFTSRL Trigger: GAGTCGCGAGGTGAACAGCACCGACTGGGACAGCAAGATGGGCTTCTGGGCTCCGTTGGTGCTGAGCCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CCA 72 bp | GCCCGGCGGGCTTCCTCTTTGCACCTCTCAGACTCTTaGGATAAAGACTCGACCTTCCGAGAGAGGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ARRASSLHLSDS*DKDSTFRERSC Trigger: GCAGCTCCTCTCTCGGAAGGTCGAGTCTTTATCCCAAGAGTCTGAGAGGTGCAAAGAGGAAGCCCGCCGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CAA 90 bp | GCCAGCTGCTTCTTTCCTGCTCGGCATGCCCGGCGGGCTTCCTCTTaGCACCTCTCAGACTCTTGGGATAAAGACTCGACCTTCCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: ASCFFPARHARRASS*HLSDSWDKDSTFRE Trigger: CTCTCGGAAGGTCGAGTCTTTATCCCAAGAGTCTGAGAGGTGCAAAGAGGAAGCCCGCCGGGCATGCCGAGCAGGAAAGAAGCAGCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CAA 90 bp | TCCAGCTTGGCATGCAGGGCCTCAATGCGTTTCTCTGTCCTCTGCTaGGCCTTGAGAGACCTCAGTGCCAGCTGCTTCTTTCCTGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SSLACRASMRFSVLC*ALRDLSASCFFPAR Trigger: CCGAGCAGGAAAGAAGCAGCTGGCACTGAGGTCTCTCAAGGCCAAGCAGAGGACAGAGAAACGCATTGAGGCCCTGCATGCCAAGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS GCA 72 bp | TCTTTCCTGCTCGGCATGCCCGGCGGGCTTCCTCTTTaGACCTCTCAGACTCTTGGGATAAAGACTCGACCT | + |
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Preference number: 6 (lower is better) Translates to: SFLLGMPGGLPL*TSQTLGIKTRP Trigger: AGGTCGAGTCTTTATCCCAAGAGTCTGAGAGGTGCAAAGAGGAAGCCCGCCGGGCATGCCGAGCAGGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS TCA 72 bp | TCCACAGCCACCAGCACCTCCTCCGCTGGAACTTTGTaGTCCCCCAGCATGTTAGAAAGAGTCCACTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: STATSTSSAGTL*SPSMLERVHLR Trigger: CCTCAAGTGGACTCTTTCTAACATGCTGGGGGATCACAAAGTTCCAGCGGAGGAGGTGCTGGTGGCTGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CAA 72 bp | AGGGCCTCAATGCGTTTCTCTGTCCTCTGCTTGGCCTaGAGAGACCTCAGTGCCAGCTGCTTCTTTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RASMRFSVLCLA*RDLSASCFFPA Trigger: AGCAGGAAAGAAGCAGCTGGCACTGAGGTCTCTCAAGGCCAAGCAGAGGACAGAGAAACGCATTGAGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CAA 72 bp | GCATGCAGGGCCTCAATGCGTTTCTCTGTCCTCTGCTaGGCCTTGAGAGACCTCAGTGCCAGCTGCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ACRASMRFSVLC*ALRDLSASCFF Trigger: AAAGAAGCAGCTGGCACTGAGGTCTCTCAAGGCCAAGCAGAGGACAGAGAAACGCATTGAGGCCCTGCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CAA 90 bp | AACCATCTGATCAGTCTGGGAGGCATAGATGCGATCCAGGATGCCTaGAACAGTGTCCAGCTTGGCATGCAGGGCCTCAATGCGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: NHLISLGGIDAIQDA*NSVQLGMQGLNAFL Trigger: GAGAAACGCATTGAGGCCCTGCATGCCAAGCTGGACACTGTTCAAGGCATCCTGGATCGCATCTATGCCTCCCAGACTGATCAGATGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CCA 72 bp | CGTCGTTCACAGGAGATACCTTGGCATGTGGTCCCCTaGCAAACTTCACAATCTTCTCTCCATTCTGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RRSQEIPWHVVP*QTSQSSLHSAP Trigger: TGGAGCAGAATGGAGAGAAGATTGTGAAGTTTGCCAGGGGACCACATGCCAAGGTATCTCCTGTGAACGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CAA 72 bp | GGTTACTCCACCAGCCAGAGTCTGAGAAACTTCATCTaGCGTGTCACAAAGCTCCTGGATCTGATCCACAAG | + |
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Preference number: 6 (lower is better) Translates to: GYSTSQSLRNFI*RVTKLLDLIHK Trigger: CTTGTGGATCAGATCCAGGAGCTTTGTGACACGCAAGATGAAGTTTCTCAGACTCTGGCTGGTGGAGTAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CCA 72 bp | AACATCCACGTCGTTCACAGGAGATACCTTGGCATGTaGTCCCCTGGCAAACTTCACAATCTTCTCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: NIHVVHRRYLGM*SPGKLHNLLSI Trigger: AATGGAGAGAAGATTGTGAAGTTTGCCAGGGGACCACATGCCAAGGTATCTCCTGTGAACGACGTGGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CAA 72 bp | ATCCTTCATGGAGAGTTTCAAGGCTCCCACACCAGCTaGGTAGGCATTAAAAACCATCTGATCAGTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: ILHGEFQGSHTS*VGIKNHLISLG Trigger: TCCCAGACTGATCAGATGGTTTTTAATGCCTACCAAGCTGGTGTGGGAGCCTTGAAACTCTCCATGAAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS TCA 72 bp | AAATCTAAACCATTGGTTACTCCACCAGCCAGAGTCTaGGAAACTTCATCTTGCGTGTCACAAAGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: KSKPLVTPPARV*ETSSCVSQSSW Trigger: CCAGGAGCTTTGTGACACGCAAGATGAAGTTTCTCAGACTCTGGCTGGTGGAGTAACCAATGGTTTAGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS GCA 72 bp | AGAGAGTTGGCTCCAATTGCCTTTTTGGAGATTTACTaGTTGGGATCAAACCTCCTTCTGATAATGACAATT | + |
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Preference number: 6 (lower is better) Translates to: RELAPIAFLEIY*LGSNLLLIMTI Trigger: AATTGTCATTATCAGAAGGAGGTTTGATCCCAAGCAGTAAATCTCCAAAAAGGCAATTGGAGCCAACTCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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| CDS CAA 72 bp | GAGTTGGCTCCAATTGCCTTTTTGGAGATTTACTGCTaGGGATCAAACCTCCTTCTGATAATGACAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: ELAPIAFLEIYC*GSNLLLIMTIS Trigger: AGAAATTGTCATTATCAGAAGGAGGTTTGATCCCAAGCAGTAAATCTCCAAAAAGGCAATTGGAGCCAACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036381.10 |
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