Pregenerated sensors for CHMP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025371Ensembl transcript IDs: ENSMUST00000026434.13, ENSMUST00000132197.8
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTGGCCAGTCCAGCCCTCCAGGCCTCCCGGGAGCCCTCAGGGTTaGCTCGCAGCCAAAGGCTCTGTGGGCCAGTCCTCAGAGAATCCC | + |
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Preference number: 1 (lower is better) Translates to: HWPVQPSRPPGSPQG*LAAKGSVGQSSENP Trigger: GGGATTCTCTGAGGACTGGCCCACAGAGCCTTTGGCTGCGAGTCAACCCTGAGGGCTCCCGGGAGGCCTGGAGGGCTGGACTGGCCAGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR CCA 90 bp | AGGGGAGCACAGGGACCCCGAGGTCTGAGCGCAGCTCACATGGGCTaGGGCAGCATGAGAACAGCACCAGGAGTAGTGGGCTGCGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: RGAQGPRGLSAAHMG*GSMRTAPGVVGCGQ Trigger: CTGGCCGCAGCCCACTACTCCTGGTGCTGTTCTCATGCTGCCCCAGCCCATGTGAGCTGCGCTCAGACCTCGGGGTCCCTGTGCTCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR GCA 90 bp | CACATGGGCTGGGGCAGCATGAGAACAGCACCAGGAGTAGTGGGCTaGGGCCAGCATGGGGTCCACAGCTGCCTAAAGCTGGGCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: HMGWGSMRTAPGVVG*GQHGVHSCLKLGLA Trigger: AGCCAGGCCCAGCTTTAGGCAGCTGTGGACCCCATGCTGGCCGCAGCCCACTACTCCTGGTGCTGTTCTCATGCTGCCCCAGCCCATGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR CCA 90 bp | GGCCTCCCGGGAGCCCTCAGGGTTGACTCGCAGCCAAAGGCTCTGTaGGCCAGTCCTCAGAGAATCCCTATGAGTGCCTGGAGAGACCAG | + |
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Preference number: 1 (lower is better) Translates to: GLPGALRVDSQPKAL*ASPQRIPMSAWRDQ Trigger: CTGGTCTCTCCAGGCACTCATAGGGATTCTCTGAGGACTGGCCCACAGAGCCTTTGGCTGCGAGTCAACCCTGAGGGCTCCCGGGAGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR CCA 90 bp | CTGCGGCCAGCATGGGGTCCACAGCTGCCTAAAGCTGGGCCTGGCTaGCCGGGGATCCACTTAGTCCAGAAGGAGAAAGAGACAAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: LRPAWGPQLPKAGPG*PGIHLVQKEKETKV Trigger: CACCTTTGTCTCTTTCTCCTTCTGGACTAAGTGGATCCCCGGCCAGCCAGGCCCAGCTTTAGGCAGCTGTGGACCCCATGCTGGCCGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR TCA 90 bp | TGGCCCCTGGCCCACCTCCCCCAACAGAAGAGGCTCAAGGTGATCTaGGGTGCAAAGATGCTCCAACAGATTTGGAGAACACTAGGGTTT | + |
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Preference number: 1 (lower is better) Translates to: WPLAHLPQQKRLKVI*GAKMLQQIWRTLGF Trigger: AAACCCTAGTGTTCTCCAAATCTGTTGGAGCATCTTTGCACCTCAGATCACCTTGAGCCTCTTCTGTTGGGGGAGGTGGGCCAGGGGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR GCA 90 bp | CCTGGCCCACCTCCCCCAACAGAAGAGGCTCAAGGTGATCTGAGGTaGAAAGATGCTCCAACAGATTTGGAGAACACTAGGGTTTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: PGPPPPTEEAQGDLR*KDAPTDLENTRVSA Trigger: GGCAGAAACCCTAGTGTTCTCCAAATCTGTTGGAGCATCTTTGCACCTCAGATCACCTTGAGCCTCTTCTGTTGGGGGAGGTGGGCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR TCA 90 bp | GGAGAAAGAGACAAAGGTGCATCCAGACTAAACTTCAAGGCGCCCTaGTGTCAGCTTCCATGTAAGCTGCTGCTCCAGCCATCAGCACCT | + |
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Preference number: 1 (lower is better) Translates to: GERDKGASRLNFKAP*CQLPCKLLLQPSAP Trigger: AGGTGCTGATGGCTGGAGCAGCAGCTTACATGGAAGCTGACATCAGGGCGCCTTGAAGTTTAGTCTGGATGCACCTTTGTCTCTTTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR CCA 90 bp | AAAGACCATGCAGGGGTCAACTTTAATACTGAGGTTGACCTGTTTTaGGTAAGGAAGAAATGCCCTCCTTTCCTGGTAGGCCCTAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: KDHAGVNFNTEVDLF*VRKKCPPFLVGPKG Trigger: ACCCTTAGGGCCTACCAGGAAAGGAGGGCATTTCTTCCTTACCCAAAACAGGTCAACCTCAGTATTAAAGTTGACCCCTGCATGGTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR-3UTR TCA 90 bp | CAGCATGGGGTCCACAGCTGCCTAAAGCTGGGCCTGGCTGGCCGGGGATCCACTCTCAGAGAATCCCTATaGGTGCCTGGAGAGACCAGG | + |
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Preference number: 2 (lower is better) Translates to: QHGVHSCLKLGLAGRGSTLRESL*VPGETR Trigger: CCTGGTCTCTCCAGGCACTCATAGGGATTCTCTGAG...AGTGGATCCCCGGCCAGCCAGGCCCAGCTTTAGGCAGCTGTGGACCCCATGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR-3UTR GCA 90 bp | CAGAGACACGAGAGGGGAGCACAGGGACCCCGAGGTCTGAGCGCAGCTCACATGAGCTTCCATGTAAGCTaGTGCTCCAGCCATCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: QRHERGAQGPRGLSAAHMSFHVS*CSSHQH Trigger: GTGCTGATGGCTGGAGCAGCAGCTTACATGGAAGCT...CATGTGAGCTGCGCTCAGACCTCGGGGTCCCTGTGCTCCCCTCTCGTGTCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR-3UTR CCA 90 bp | AGGATGCCAGGCAAGGCGAGAACTGCTCAGCTGAAGCCCCCACCAGCTCATGTGCAGCCAAAGGCTCTGTaGGCCAGTCCTCAGAGAATC | + |
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Preference number: 2 (lower is better) Translates to: RMPGKARTAQLKPPPAHVQPKAL*ASPQRI Trigger: GATTCTCTGAGGACTGGCCCACAGAGCCTTTGGCTG...CACATGAGCTGGTGGGGGCTTCAGCTGAGCAGTTCTCGCCTTGCCTGGCATCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR-3UTR TCA 90 bp | TCAACATGTTTTTCTTCTGCGAACAGACCCCAAGCCGGGCTCCTAGATTTGTCCCCCCACCAGCTCATGTaGGCAGCAGAGACACGAGAG | + |
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Preference number: 2 (lower is better) Translates to: STCFSSANRPQAGLLDLSPHQLM*AAETRE Trigger: CTCTCGTGTCTCTGCTGCTCACATGAGCTGGTGGGG...GGACAAATCTAGGAGCCCGGCTTGGGGTCTGTTCGCAGAAGAAAAACATGTTGA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR-3UTR GCA 90 bp | TTCAACATGTTTTTCTTCTGCGAACAGACCCCAAGCCGGGCTCCTAGATTTGTCCCAGCCATCAGCACCTaGACTGGCCAGTCCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: FNMFFFCEQTPSRAPRFVPAIST*TGQSSP Trigger: AGGGCTGGACTGGCCAGTGCAGGTGCTGATGGCTGG...GACAAATCTAGGAGCCCGGCTTGGGGTCTGTTCGCAGAAGAAAAACATGTTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR-3UTR TCA 90 bp | ACCTTCAACATGTTTTTCTTCTGCGAACAGACCCCAAGCCGGGCTCCTAGATTTAACTTCAAGGCGCCCTaGTGTCAGCTTCCATGTAAG | + |
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Preference number: 2 (lower is better) Translates to: TFNMFFFCEQTPSRAPRFNFKAP*CQLPCK Trigger: CTTACATGGAAGCTGACATCAGGGCGCCTTGAAGTT...AAATCTAGGAGCCCGGCTTGGGGTCTGTTCGCAGAAGAAAAACATGTTGAAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGATTGTCCGTGATGAAACAAGCATAGGGCTCTGGAGGTCAGTTCAGAGTATGCTCCAACAGATTTaGAGAACACTAGGGTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PEIVRDETSIGLWRSVQSMLQQI*RTLGFL Trigger: CAGAAACCCTAGTGTTCTCCAAATCTGTTGGAGCAT...ACTCTGAACTGACCTCCAGAGCCCTATGCTTGTTTCATCACGGACAATCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR-3UTR GCA 90 bp | TTCAACATGTTTTTCTTCTGCGAACAGACCCCAAGCCGGGCTCCTAGATTTGTCTCTGAGGTGCAAAGATaGTCCAACAGATTTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: FNMFFFCEQTPSRAPRFVSEVQR*SNRFGE Trigger: TTCTCCAAATCTGTTGGAGCATCTTTGCACCTCAGA...GACAAATCTAGGAGCCCGGCTTGGGGTCTGTTCGCAGAAGAAAAACATGTTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR CCA 72 bp | CATGTAAGCTGCTGCTCCAGCCATCAGCACCTGCACTaGCCAGTCCAGCCCTCCAGGCCTCCCGGGAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: HVSCCSSHQHLH*PVQPSRPPGSP Trigger: AGGGCTCCCGGGAGGCCTGGAGGGCTGGACTGGCCAGTGCAGGTGCTGATGGCTGGAGCAGCAGCTTACATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR-3UTR CAA 90 bp | TCCGTGCCTCCTGGGCGTTGGTGGCTTAGTGTGTCCAGGACTCCATGGGGTACACGGGAGCCCTCAGGGTaGACTCGCAGCCAAAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: SVPPGRWWLSVSRTPWGTREPSG*TRSQRL Trigger: GAGCCTTTGGCTGCGAGTCAACCCTGAGGGCTCCCG...TGTACCCCATGGAGTCCTGGACACACTAAGCCACCAACGCCCAGGAGGCACGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR GCA 72 bp | TGGGGCAGCATGAGAACAGCACCAGGAGTAGTGGGCTaGGGCCAGCATGGGGTCCACAGCTGCCTAAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: WGSMRTAPGVVG*GQHGVHSCLKL Trigger: CAGCTTTAGGCAGCTGTGGACCCCATGCTGGCCGCAGCCCACTACTCCTGGTGCTGTTCTCATGCTGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR CCA 72 bp | CCAAGCCGGGCTCCTAGATTTGTCCATTCTGTGGGATaGCCCCTGGCCCACCTCCCCCAACAGAAGAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: PSRAPRFVHSVG*PLAHLPQQKRL Trigger: GAGCCTCTTCTGTTGGGGGAGGTGGGCCAGGGGCCATCCCACAGAATGGACAAATCTAGGAGCCCGGCTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR GCA 72 bp | ACTGAGGGGTGTCAGGATGCCAGGCAAGGCGAGAACTaGTCAGCTGAAGCCCCCACCAGCTCATGTGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: TEGCQDARQGEN*SAEAPTSSCEQ Trigger: CTGCTCACATGAGCTGGTGGGGGCTTCAGCTGAGCAGTTCTCGCCTTGCCTGGCATCCTGACACCCCTCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR CCA 72 bp | GGAGCCCTCAGGGTTGACTCGCAGCCAAAGGCTCTGTaGGCCAGTCCTCAGAGAATCCCTATGAGTGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: GALRVDSQPKAL*ASPQRIPMSAW Trigger: CCAGGCACTCATAGGGATTCTCTGAGGACTGGCCCACAGAGCCTTTGGCTGCGAGTCAACCCTGAGGGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR GCA 72 bp | ACTTCAAGGCGCCCTGATGTCAGCTTCCATGTAAGCTaGTGCTCCAGCCATCAGCACCTGCACTGGCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: TSRRPDVSFHVS*CSSHQHLHWPV Trigger: GACTGGCCAGTGCAGGTGCTGATGGCTGGAGCAGCAGCTTACATGGAAGCTGACATCAGGGCGCCTTGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR CCA 72 bp | TGGAGGTCAGTTCAGAGTTCCGTGCCTCCTGGGCGTTaGTGGCTTAGTGTGTCCAGGACTCCATGGGGTACA | + |
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Preference number: 3 (lower is better) Translates to: WRSVQSSVPPGR*WLSVSRTPWGT Trigger: TGTACCCCATGGAGTCCTGGACACACTAAGCCACCAACGCCCAGGAGGCACGGAACTCTGAACTGACCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR TCA 72 bp | CCCTGGCCCACCTCCCCCAACAGAAGAGGCTCAAGGTaGTCTGAGGTGCAAAGATGCTCCAACAGATTTGGA | + |
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Preference number: 3 (lower is better) Translates to: PWPTSPNRRGSR*SEVQRCSNRFG Trigger: TCCAAATCTGTTGGAGCATCTTTGCACCTCAGATCACCTTGAGCCTCTTCTGTTGGGGGAGGTGGGCCAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR GCA 72 bp | CAGATTTGGAGAACACTAGGGTTTCTGCCACTAGCCTaGAGGGTAACTGAGGGGTGTCAGGATGCCAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: QIWRTLGFLPLA*RVTEGCQDARQ Trigger: TTGCCTGGCATCCTGACACCCCTCAGTTACCCTGCAGGCTAGTGGCAGAAACCCTAGTGTTCTCCAAATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR CCA 72 bp | CCTGGGCGTTGGTGGCTTAGTGTGTCCAGGACTCCATaGGGTACATGCCCATTAAAACAGGGTCTTGTTACC | + |
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Preference number: 3 (lower is better) Translates to: PGRWWLSVSRTP*GTCPLKQGLVT Trigger: GGTAACAAGACCCTGTTTTAATGGGCATGTACCCCATGGAGTCCTGGACACACTAAGCCACCAACGCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR GCA 72 bp | CAGGGTCTTGTTACCACCTTCAACATGTTTTTCTTCTaGGAACAGACCCCAAGCCGGGCTCCTAGATTTGTC | + |
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Preference number: 3 (lower is better) Translates to: QGLVTTFNMFFF*EQTPSRAPRFV Trigger: GACAAATCTAGGAGCCCGGCTTGGGGTCTGTTCGCAGAAGAAAAACATGTTGAAGGTGGTAACAAGACCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR GCA 72 bp | TGGTGGCTTAGTGTGTCCAGGACTCCATGGGGTACATaGCCATTAAAACAGGGTCTTGTTACCACCTTCAAC | + |
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Preference number: 3 (lower is better) Translates to: WWLSVSRTPWGT*PLKQGLVTTFN Trigger: GTTGAAGGTGGTAACAAGACCCTGTTTTAATGGGCATGTACCCCATGGAGTCCTGGACACACTAAGCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| 3UTR CCA 72 bp | GCAGGGGTCAACTTTAATACTGAGGTTGACCTGTTTTaGGTAAGGAAGAAATGCCCTCCTTTCCTGGTAGGC | + |
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Preference number: 3 (lower is better) Translates to: AGVNFNTEVDLF*VRKKCPPFLVG Trigger: GCCTACCAGGAAAGGAGGGCATTTCTTCCTTACCCAAAACAGGTCAACCTCAGTATTAAAGTTGACCCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR GCA 90 bp | CAGAGACACGAGAGGGGAGCACAGGGACCCCGAGGTCTGAGCGCAGCTCACATGCCATCCCGCAGCAGCTaGCTGGCCAGGGCCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QRHERGAQGPRGLSAAHMPSRSS*LARARS Trigger: GGAGCGGGCCCTGGCCAGGCAGCTGCTGCGGGATGG...CATGTGAGCTGCGCTCAGACCTCGGGGTCCCTGTGCTCCCCTCTCGTGTCTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR GCA 90 bp | CAGCATGGGGTCCACAGCTGCCTAAAGCTGGGCCTGGCTGGCCGGGGATCCACTAGCCGCCACCAGCTCTaGCTGCCTGGATCTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: QHGVHSCLKLGLAGRGSTSRHQL*LPGSGL Trigger: AAGGCCAGATCCAGGCAGGCAGAGCTGGTGGCGGCT...AGTGGATCCCCGGCCAGCCAGGCCCAGCTTTAGGCAGCTGTGGACCCCATGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR CCA 90 bp | AAGCTGCTGCTCCAGCCATCAGCACCTGCACTGGCCAGTCCAGCCCTCCAGGCCGCCTGGATCTGGCCTTaGCAGGGGCTTCTGGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: KLLLQPSAPALASPALQAAWIWP*QGLLGF Trigger: GAAACCCAGAAGCCCCTGCCAAGGCCAGATCCAGGC...GGCCTGGAGGGCTGGACTGGCCAGTGCAGGTGCTGATGGCTGGAGCAGCAGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR CCA 90 bp | AGCTCACATGGGCTGGGGCAGCATGAGAACAGCACCAGGAGTAGTGGGCTGCGGCCAGCTCTGCCTGCCTaGATCTGGCCTTGGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SSHGLGQHENSTRSSGLRPALPA*IWPWQG Trigger: CCCCTGCCAAGGCCAGATCCAGGCAGGCAGAGCTGG...CCGCAGCCCACTACTCCTGGTGCTGTTCTCATGCTGCCCCAGCCCATGTGAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR GCA 90 bp | CTCCCGGGAGCCCTCAGGGTTGACTCGCAGCCAAAGGCTCTGTGGGCCAGTCCTTCCCTCTCCAGCTGCTaGGTGACCCTCTTCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: LPGALRVDSQPKALWASPSLSSC*VTLFWY Trigger: GTACCAGAAGAGGGTCACGCAGCAGCTGGAGAGGGA...AGGACTGGCCCACAGAGCCTTTGGCTGCGAGTCAACCCTGAGGGCTCCCGGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR GCA 90 bp | AGGATGCCAGGCAAGGCGAGAACTGCTCAGCTGAAGCCCCCACCAGCTCATGTGTCGGTGACTCGGCTCTaGTTCTTGCGGCCGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: RMPGKARTAQLKPPPAHVSVTRL*FLRPNR Trigger: CCTGTTCGGCCGCAAGAAGCAGAGCCGAGTCACCGA...CACATGAGCTGGTGGGGGCTTCAGCTGAGCAGTTCTCGCCTTGCCTGGCATCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR GCA 90 bp | AAAGCTGGGCCTGGCTGGCCGGGGATCCACTTAGTCCAGAAGGAGAAAGAGACACCGCTGGTACTCCACTaGCTCCTGGGTCTCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: KAGPGWPGIHLVQKEKETPLVLH*LLGLVQ Trigger: CTGGACGAGACCCAGGAGGCAGTGGAGTACCAGCGG...TGTCTCTTTCTCCTTCTGGACTAAGTGGATCCCCGGCCAGCCAGGCCCAGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR TCA 90 bp | AAAGCTGGGCCTGGCTGGCCGGGGATCCACTTAGTCCAGAAGGAGAAAGAGACACCCTGTCCTGTTCGGTaGCTCGGCTCTGCTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: KAGPGWPGIHLVQKEKETPCPVR*LGSASC Trigger: GCAAGAAGCAGAGCCGAGTCACCGAACAGGACAGGG...TGTCTCTTTCTCCTTCTGGACTAAGTGGATCCCCGGCCAGCCAGGCCCAGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR TCA 90 bp | CAGCTGAAGCCCCCACCAGCTCATGTGAGCAGCAGAGACACGAGAGGGGAGCACGGTACCTCTTCTTCTTaGGCAGCAGCTTGGCTCGTT | + |
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Preference number: 4 (lower is better) Translates to: QLKPPPAHVSSRDTRGEHGTSSS*AAAWLV Trigger: AACGAGCCAAGCTGCTGCTCAAGAAGAAGAGGTACC...GTGCTCCCCTCTCGTGTCTCTGCTGCTCACATGAGCTGGTGGGGGCTTCAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR GCA 90 bp | TGTCAGCTTCCATGTAAGCTGCTGCTCCAGCCATCAGCACCTGCACTGGCCAGTTGGCTCGTTCTTTCCTaGCATCCCGCAGCAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CQLPCKLLLQPSAPALASWLVLS*HPAAAA Trigger: GGCAGCTGCTGCGGGATGGCAGGAAAGAACGAGCCA...ACTGGCCAGTGCAGGTGCTGATGGCTGGAGCAGCAGCTTACATGGAAGCTGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR CCA 90 bp | CAGCTGAAGCCCCCACCAGCTCATGTGAGCAGCAGAGACACGAGAGGGGAGCACTGCGTGACCCTCTTCTaGTACTGCCTCAGTTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: QLKPPPAHVSSRDTRGEHCVTLF*YCLSLS Trigger: GGACAAACTGAGGCAGTACCAGAAGAGGGTCACGCA...GTGCTCCCCTCTCGTGTCTCTGCTGCTCACATGAGCTGGTGGGGGCTTCAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR TCA 90 bp | CAGCATGGGGTCCACAGCTGCCTAAAGCTGGGCCTGGCTGGCCGGGGATCCACTCCATTTGTTCCTGAGTaGTTGCATTCAGCTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QHGVHSCLKLGLAGRGSTPFVPE*LHSALP Trigger: TGGAAGAGCTGAATGCAATCACTCAGGAACAAATGG...AGTGGATCCCCGGCCAGCCAGGCCCAGCTTTAGGCAGCTGTGGACCCCATGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR GCA 90 bp | AGGATGCCAGGCAAGGCGAGAACTGCTCAGCTGAAGCCCCCACCAGCTCATGTGAGCAGCTCATCAATTTaGCGCTGGTACTCCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: RMPGKARTAQLKPPPAHVSSSSI*RWYSTA Trigger: GGCAGTGGAGTACCAGCGGCAAATTGATGAGCTGCT...CACATGAGCTGGTGGGGGCTTCAGCTGAGCAGTTCTCGCCTTGCCTGGCATCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR CCA 90 bp | GCTGAAGCCCCCACCAGCTCATGTGAGCAGCAGAGACACGAGAGGGGAGCACAGTCTCCACCTCCTCTATaGACATCACCTGGTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: AEAPTSSCEQQRHERGAQSPPPL*TSPGAS Trigger: AGATGCACCAGGTGATGTCCATAGAGGAGGTGGAGA...CTGTGCTCCCCTCTCGTGTCTCTGCTGCTCACATGAGCTGGTGGGGGCTTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR GCA 90 bp | CAGCTTCCATGTAAGCTGCTGCTCCAGCCATCAGCACCTGCACTGGCCAGTCCACTCAGTTTGTCCCTCTaGTGCTTCAGTTGCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: QLPCKLLLQPSAPALASPLSLSL*CFSCRM Trigger: CATCCTGCAACTGAAGCAGCAGAGGGACAAACTGAG...TGGACTGGCCAGTGCAGGTGCTGATGGCTGGAGCAGCAGCTTACATGGAAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR GCA 90 bp | AGCTGGGCCTGGCTGGCCGGGGATCCACTTAGTCCAGAAGGAGAAAGAGACAAAACCCTCTTCTGGTACTaGCTCAGTTTGTCCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SWAWLAGDPLSPEGERDKTLFWY*LSLSLC Trigger: GCAGAGGGACAAACTGAGGCAGTACCAGAAGAGGGT...TTTGTCTCTTTCTCCTTCTGGACTAAGTGGATCCCCGGCCAGCCAGGCCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR CCA 90 bp | CCAGAGATTGTCCGTGATGAAACAAGCATAGGGCTCTGGAGGTCAGTTCAGAGTCTGCCTGCCTGGATCTaGCCTTGGCAGGGGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PEIVRDETSIGLWRSVQSLPAWI*PWQGLL Trigger: CAGAAGCCCCTGCCAAGGCCAGATCCAGGCAGGCAG...ACTCTGAACTGACCTCCAGAGCCCTATGCTTGTTTCATCACGGACAATCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR GCA 90 bp | TCAACATGTTTTTCTTCTGCGAACAGACCCCAAGCCGGGCTCCTAGATTTGTCCCTCGGCTCTGCTTCTTaGGGCCGAACAGGTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: STCFSSANRPQAGLLDLSLGSAS*GRTGCP Trigger: TGGGCAACCTGTTCGGCCGCAAGAAGCAGAGCCGAG...GGACAAATCTAGGAGCCCGGCTTGGGGTCTGTTCGCAGAAGAAAAACATGTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR GCA 90 bp | AGCTCACATGGGCTGGGGCAGCATGAGAACAGCACCAGGAGTAGTGGGCTGCGGATGGACATCACCTGGTaGATCTTATTCAGACATTCG | + |
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Preference number: 4 (lower is better) Translates to: SSHGLGQHENSTRSSGLRMDITW*ILFRHS Trigger: CGAATGTCTGAATAAGATGCACCAGGTGATGTCCAT...CCGCAGCCCACTACTCCTGGTGCTGTTCTCATGCTGCCCCAGCCCATGTGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR CCA 90 bp | AGCTGGGCCTGGCTGGCCGGGGATCCACTTAGTCCAGAAGGAGAAAGAGACAAATCCAGGCTGCTGATCTaGTTTTCTGTCCTATCGAGC | + |
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Preference number: 4 (lower is better) Translates to: SWAWLAGDPLSPEGERDKSRLLI*FSVLSS Trigger: GCTCGATAGGACAGAAAACCAGATCAGCAGCCTGGA...TTTGTCTCTTTCTCCTTCTGGACTAAGTGGATCCCCGGCCAGCCAGGCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR TCA 90 bp | CCAACAGAAGAGGCTCAAGGTGATCTGAGGTGCAAAGATGCTCCAACAGATTTGCCTCATCCTCCTGGGTaGAGTTTCCGGCCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PTEEAQGDLRCKDAPTDLPHPPG*SFRPAA Trigger: AGCTGCTGGCCGGAAACTTCACCCAGGAGGATGAGG...CAAATCTGTTGGAGCATCTTTGCACCTCAGATCACCTTGAGCCTCTTCTGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR TCA 90 bp | GACTCGCAGCCAAAGGCTCTGTGGGCCAGTCCTCAGAGAATCCCTATGAGTGCCAACTCCATTTGTTCCTaGGTGATTGCATTCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: DSQPKALWASPQRIPMSANSICS*VIAFSS Trigger: AGAGCTGAATGCAATCACTCAGGAACAAATGGAGTT...GGCACTCATAGGGATTCTCTGAGGACTGGCCCACAGAGCCTTTGGCTGCGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR CCA 90 bp | CCAACAGAAGAGGCTCAAGGTGATCTGAGGTGCAAAGATGCTCCAACAGATTTGTACTCCACTGCCTCCTaGGTCTCGTCCAGGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: PTEEAQGDLRCKDAPTDLYSTAS*VSSRIL Trigger: GAGGATCCTGGACGAGACCCAGGAGGCAGTGGAGTA...CAAATCTGTTGGAGCATCTTTGCACCTCAGATCACCTTGAGCCTCTTCTGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR CCA 90 bp | CCAGAGATTGTCCGTGATGAAACAAGCATAGGGCTCTGGAGGTCAGTTCAGAGTTCATCAATTTGCCGCTaGTACTCCACTGCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PEIVRDETSIGLWRSVQSSSICR*YSTASW Trigger: CCAGGAGGCAGTGGAGTACCAGCGGCAAATTGATGA...ACTCTGAACTGACCTCCAGAGCCCTATGCTTGTTTCATCACGGACAATCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR TCA 90 bp | CCAACAGAAGAGGCTCAAGGTGATCTGAGGTGCAAAGATGCTCCAACAGATTTGTGGCTTCCAGGCTGCTaGTCTGGTTTTCTGTCCTAT | + |
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Preference number: 4 (lower is better) Translates to: PTEEAQGDLRCKDAPTDLWLPGC*SGFLSY Trigger: ATAGGACAGAAAACCAGATCAGCAGCCTGGAAGCCA...CAAATCTGTTGGAGCATCTTTGCACCTCAGATCACCTTGAGCCTCTTCTGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR GCA 90 bp | GGTGATCTGAGGTGCAAAGATGCTCCAACAGATTTGGAGAACACTAGGGTTTCTAGTTTGTCCCTCTGCTaGTTCAGTTGCAGGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: GDLRCKDAPTDLENTRVSSLSLC*FSCRMA Trigger: GGCCATCCTGCAACTGAAGCAGCAGAGGGACAAACT...AGAAACCCTAGTGTTCTCCAAATCTGTTGGAGCATCTTTGCACCTCAGATCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS GCA 90 bp | TCCCGCAGCAGCTGCCTGGCCAGGGCCCGCTCCCTCTCCAGCTGCTaGGTGACCCTCTTCTGGTACTGCCTCAGTTTGTCCCTCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SRSSCLARARSLSSC*VTLFWYCLSLSLCC Trigger: GCAGCAGAGGGACAAACTGAGGCAGTACCAGAAGAGGGTCACGCAGCAGCTGGAGAGGGAGCGGGCCCTGGCCAGGCAGCTGCTGCGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR CAA 90 bp | CAGCTGAAGCCCCCACCAGCTCATGTGAGCAGCAGAGACACGAGAGGGGAGCACCCTCTGCTGCTTCAGTaGCAGGATGGCCCTGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: QLKPPPAHVSSRDTRGEHPLLLQ*QDGPVL Trigger: CAGGACAGGGCCATCCTGCAACTGAAGCAGCAGAGG...GTGCTCCCCTCTCGTGTCTCTGCTGCTCACATGAGCTGGTGGGGGCTTCAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR CAA 90 bp | AAGCTGCTGCTCCAGCCATCAGCACCTGCACTGGCCAGTCCAGCCCTCCAGGCCTGGTACTGCCTCAGTTaGTCCCTCTGCTGCTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: KLLLQPSAPALASPALQAWYCLS*SLCCFS Trigger: ACTGAAGCAGCAGAGGGACAAACTGAGGCAGTACCA...GGCCTGGAGGGCTGGACTGGCCAGTGCAGGTGCTGATGGCTGGAGCAGCAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS CCA 90 bp | CCGGCCAGCAGCTCATCAATTTGCCGCTGGTACTCCACTGCCTCCTaGGTCTCGTCCAGGATCCTCTCCACCTCCTCTATGGACATCACC | + |
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Preference number: 5 (lower is better) Translates to: PASSSSICRWYSTAS*VSSRILSTSSMDIT Trigger: GGTGATGTCCATAGAGGAGGTGGAGAGGATCCTGGACGAGACCCAGGAGGCAGTGGAGTACCAGCGGCAAATTGATGAGCTGCTGGCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026434.13 ENSMUST00000132197.8 |
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| CDS CCA 90 bp | TCCTCCTGGGTGAAGTTTCCGGCCAGCAGCTCATCAATTTGCCGCTaGTACTCCACTGCCTCCTGGGTCTCGTCCAGGATCCTCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: SSWVKFPASSSSICR*YSTASWVSSRILST Trigger: GGTGGAGAGGATCCTGGACGAGACCCAGGAGGCAGTGGAGTACCAGCGGCAAATTGATGAGCTGCTGGCCGGAAACTTCACCCAGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026434.13 ENSMUST00000132197.8 |
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| CDS-3UTR CAA 90 bp | TCAGGGTTGACTCGCAGCCAAAGGCTCTGTGGGCCAGTCCTCAGAGAATCCCTAACTCGGCTCTGCTTCTaGCGGCCGAACAGGTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: SGLTRSQRLCGPVLRESLTRLCF*RPNRLP Trigger: GGGCAACCTGTTCGGCCGCAAGAAGCAGAGCCGAGT...TAGGGATTCTCTGAGGACTGGCCCACAGAGCCTTTGGCTGCGAGTCAACCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS GCA 90 bp | TGCTGCGTGACCCTCTTCTGGTACTGCCTCAGTTTGTCCCTCTGCTaGTTCAGTTGCAGGATGGCCCTGTCCTGTTCGGTGACTCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: CCVTLFWYCLSLSLC*FSCRMALSCSVTRL Trigger: GAGCCGAGTCACCGAACAGGACAGGGCCATCCTGCAACTGAAGCAGCAGAGGGACAAACTGAGGCAGTACCAGAAGAGGGTCACGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS GCA 90 bp | AGCTGCTGCGTGACCCTCTTCTGGTACTGCCTCAGTTTGTCCCTCTaGTGCTTCAGTTGCAGGATGGCCCTGTCCTGTTCGGTGACTCGG | + |
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Preference number: 5 (lower is better) Translates to: SCCVTLFWYCLSLSL*CFSCRMALSCSVTR Trigger: CCGAGTCACCGAACAGGACAGGGCCATCCTGCAACTGAAGCAGCAGAGGGACAAACTGAGGCAGTACCAGAAGAGGGTCACGCAGCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR CAA 90 bp | AGCTGGGCCTGGCTGGCCGGGGATCCACTTAGTCCAGAAGGAGAAAGAGACAAATGCCTGGATCTGGCCTaGGCAGGGGCTTCTGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: SWAWLAGDPLSPEGERDKCLDLA*AGASGF Trigger: AAACCCAGAAGCCCCTGCCAAGGCCAGATCCAGGCA...TTTGTCTCTTTCTCCTTCTGGACTAAGTGGATCCCCGGCCAGCCAGGCCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS GCA 90 bp | GAAGTTTCCGGCCAGCAGCTCATCAATTTGCCGCTGGTACTCCACTaGCTCCTGGGTCTCGTCCAGGATCCTCTCCACCTCCTCTATGGA | + |
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Preference number: 5 (lower is better) Translates to: EVSGQQLINLPLVLH*LLGLVQDPLHLLYG Trigger: TCCATAGAGGAGGTGGAGAGGATCCTGGACGAGACCCAGGAGGCAGTGGAGTACCAGCGGCAAATTGATGAGCTGCTGGCCGGAAACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026434.13 ENSMUST00000132197.8 |
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| CDS-3UTR CAA 90 bp | TGTCAGCTTCCATGTAAGCTGCTGCTCCAGCCATCAGCACCTGCACTGGCCAGTCGGTACCTCTTCTTCTaGAGCAGCAGCTTGGCTCGT | + |
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Preference number: 5 (lower is better) Translates to: CQLPCKLLLQPSAPALASRYLFF*SSSLAR Trigger: ACGAGCCAAGCTGCTGCTCAAGAAGAAGAGGTACCG...ACTGGCCAGTGCAGGTGCTGATGGCTGGAGCAGCAGCTTACATGGAAGCTGACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS CCA 90 bp | TGGGTCTCGTCCAGGATCCTCTCCACCTCCTCTATGGACATCACCTaGTGCATCTTATTCAGACATTCGTTCCCCACCTGTAGCCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: WVSSRILSTSSMDIT*CILFRHSFPTCSPS Trigger: GGAGGGGCTACAGGTGGGGAACGAATGTCTGAATAAGATGCACCAGGTGATGTCCATAGAGGAGGTGGAGAGGATCCTGGACGAGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026434.13 ENSMUST00000132197.8 |
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| CDS GCA 90 bp | ATGGCTTCCAGGCTGCTGATCTGGTTTTCTGTCCTATCGAGCAGTTaGTCCCGGTACCTCTTCTTCTTGAGCAGCAGCTTGGCTCGTTCT | + |
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Preference number: 5 (lower is better) Translates to: MASRLLIWFSVLSSS*SRYLFFLSSSLARS Trigger: AGAACGAGCCAAGCTGCTGCTCAAGAAGAAGAGGTACCGGGAGCAACTGCTCGATAGGACAGAAAACCAGATCAGCAGCCTGGAAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS-3UTR CAA 90 bp | CCTTCAACATGTTTTTCTTCTGCGAACAGACCCCAAGCCGGGCTCCTAGATTTGTTCTTGAGCAGCAGCTaGGCTCGTTCTTTCCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: PSTCFSSANRPQAGLLDLFLSSS*ARSFLP Trigger: TGGCAGGAAAGAACGAGCCAAGCTGCTGCTCAAGAA...CAAATCTAGGAGCCCGGCTTGGGGTCTGTTCGCAGAAGAAAAACATGTTGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS CAA 72 bp | GAAGCCGCCACCAGCTCTGCCTGCCTGGATCTGGCCTaGGCAGGGGCTTCTGGGTTTCGGTCAGGGAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: EAATSSACLDLA*AGASGFRSGSG Trigger: GCCGCTCCCTGACCGAAACCCAGAAGCCCCTGCCAAGGCCAGATCCAGGCAGGCAGAGCTGGTGGCGGCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS TCA 72 bp | GCTGCTTCAGTTGCAGGATGGCCCTGTCCTGTTCGGTaGCTCGGCTCTGCTTCTTGCGGCCGAACAGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: AASVAGWPCPVR*LGSASCGRTGC Trigger: GCAACCTGTTCGGCCGCAAGAAGCAGAGCCGAGTCACCGAACAGGACAGGGCCATCCTGCAACTGAAGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS GCA 72 bp | GGCCAGCAGCTCATCAATTTGCCGCTGGTACTCCACTaGCTCCTGGGTCTCGTCCAGGATCCTCTCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: GQQLINLPLVLH*LLGLVQDPLHL Trigger: GAGGTGGAGAGGATCCTGGACGAGACCCAGGAGGCAGTGGAGTACCAGCGGCAAATTGATGAGCTGCTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026434.13 ENSMUST00000132197.8 |
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| CDS GCA 72 bp | TGGTACTGCCTCAGTTTGTCCCTCTGCTGCTTCAGTTaGAGGATGGCCCTGTCCTGTTCGGTGACTCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: WYCLSLSLCCFS*RMALSCSVTRL Trigger: GAGCCGAGTCACCGAACAGGACAGGGCCATCCTGCAACTGAAGCAGCAGAGGGACAAACTGAGGCAGTACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS CCA 72 bp | GTGAAGTTTCCGGCCAGCAGCTCATCAATTTGCCGCTaGTACTCCACTGCCTCCTGGGTCTCGTCCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: VKFPASSSSICR*YSTASWVSSRI Trigger: GATCCTGGACGAGACCCAGGAGGCAGTGGAGTACCAGCGGCAAATTGATGAGCTGCTGGCCGGAAACTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026434.13 ENSMUST00000132197.8 |
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| CDS CAA 72 bp | CTGGTACTGCCTCAGTTTGTCCCTCTGCTGCTTCAGTaGCAGGATGGCCCTGTCCTGTTCGGTGACTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: LVLPQFVPLLLQ*QDGPVLFGDSA Trigger: AGCCGAGTCACCGAACAGGACAGGGCCATCCTGCAACTGAAGCAGCAGAGGGACAAACTGAGGCAGTACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS TCA 72 bp | CCTGTAGCCCCTCCATCACCTTCATCTCGATCTGCGTaGACTCGATGCTCTGAACCATGGCTTCCAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PVAPPSPSSRSA*TRCSEPWLPGC Trigger: GCAGCCTGGAAGCCATGGTTCAGAGCATCGAGTTCACGCAGATCGAGATGAAGGTGATGGAGGGGCTACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS GCA 72 bp | ACCCTCTTCTGGTACTGCCTCAGTTTGTCCCTCTGCTaGTTCAGTTGCAGGATGGCCCTGTCCTGTTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: TLFWYCLSLSLC*FSCRMALSCSV Trigger: CACCGAACAGGACAGGGCCATCCTGCAACTGAAGCAGCAGAGGGACAAACTGAGGCAGTACCAGAAGAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS GCA 72 bp | GTGACCCTCTTCTGGTACTGCCTCAGTTTGTCCCTCTaGTGCTTCAGTTGCAGGATGGCCCTGTCCTGTTCG | + |
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Preference number: 6 (lower is better) Translates to: VTLFWYCLSLSL*CFSCRMALSCS Trigger: CGAACAGGACAGGGCCATCCTGCAACTGAAGCAGCAGAGGGACAAACTGAGGCAGTACCAGAAGAGGGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS CAA 90 bp | TGGTTTTCTGTCCTATCGAGCAGTTGCTCCCGGTACCTCTTCTTCTaGAGCAGCAGCTTGGCTCGTTCTTTCCTGCCATCCCGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: WFSVLSSSCSRYLFF*SSSLARSFLPSRSS Trigger: GCTGCTGCGGGATGGCAGGAAAGAACGAGCCAAGCTGCTGCTCAAGAAGAAGAGGTACCGGGAGCAACTGCTCGATAGGACAGAAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS CAA 72 bp | GTCCTATCGAGCAGTTGCTCCCGGTACCTCTTCTTCTaGAGCAGCAGCTTGGCTCGTTCTTTCCTGCCATCC | + |
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Preference number: 6 (lower is better) Translates to: VLSSSCSRYLFF*SSSLARSFLPS Trigger: GGATGGCAGGAAAGAACGAGCCAAGCTGCTGCTCAAGAAGAAGAGGTACCGGGAGCAACTGCTCGATAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS CAA 90 bp | CATGGCTTCCAGGCTGCTGATCTGGTTTTCTGTCCTATCGAGCAGTaGCTCCCGGTACCTCTTCTTCTTGAGCAGCAGCTTGGCTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: HGFQAADLVFCPIEQ*LPVPLLLEQQLGSF Trigger: GAACGAGCCAAGCTGCTGCTCAAGAAGAAGAGGTACCGGGAGCAACTGCTCGATAGGACAGAAAACCAGATCAGCAGCCTGGAAGCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS CAA 72 bp | CAGGCTGCTGATCTGGTTTTCTGTCCTATCGAGCAGTaGCTCCCGGTACCTCTTCTTCTTGAGCAGCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: QAADLVFCPIEQ*LPVPLLLEQQL Trigger: AAGCTGCTGCTCAAGAAGAAGAGGTACCGGGAGCAACTGCTCGATAGGACAGAAAACCAGATCAGCAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026434.13 |
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| CDS GCA 72 bp | AGGATCCTCTCCACCTCCTCTATGGACATCACCTGGTaGATCTTATTCAGACATTCGTTCCCCACCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RILSTSSMDITW*ILFRHSFPTCS Trigger: GCTACAGGTGGGGAACGAATGTCTGAATAAGATGCACCAGGTGATGTCCATAGAGGAGGTGGAGAGGATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026434.13 ENSMUST00000132197.8 |
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