Pregenerated sensors for CHMP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053119Ensembl transcript IDs: ENSMUST00000059462.12, ENSMUST00000065364.5, ENSMUST00000132917.8, ENSMUST00000204199.2, ENSMUST00000204535.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAATTCTGCCAAAGCCACAGGATGGCAGGCAGAACTCTTCCTCCTaGGACGGGGACAGTACGTGCTCTGCACGGCTGGTTTACCTTACA | + |
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Preference number: 1 (lower is better) Translates to: QILPKPQDGRQNSSS*DGDSTCSARLVYLT Trigger: TGTAAGGTAAACCAGCCGTGCAGAGCACGTACTGTCCCCGTCTCAGGAGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR GCA 90 bp | GGCTGGGAAAGGAAAGCCCATGGAGACAGCAACCGGGTCAGTGGGTaGCAAGGGATTAGAGGAAGCAATGAACAGCACATGGGTTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: GWERKAHGDSNRVSG*QGIRGSNEQHMGCV Trigger: AACACAACCCATGTGCTGTTCATTGCTTCCTCTAATCCCTTGGCACCCACTGACCCGGTTGCTGTCTCCATGGGCTTTCCTTTCCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR CCA 90 bp | ACCTGCTATGAGAGGGTGAGTCTTCCATACCTTGGCACTTCTCTCTaGAAATGTCCAGTGGTGTCTCTCAGTCTAGAGGAGGACACCAGA | + |
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Preference number: 1 (lower is better) Translates to: TCYERVSLPYLGTSL*KCPVVSLSLEEDTR Trigger: TCTGGTGTCCTCCTCTAGACTGAGAGACACCACTGGACATTTCCAGAGAGAAGTGCCAAGGTATGGAAGACTCACCCTCTCATAGCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| 3UTR GCA 90 bp | AAACATGCCCAGGGTACTTCAACACAAATCCCTCATGACAAATTCTaGCAAAGCCACAGGATGGCAGGCAGAACTCTTCCTCCTGAGACG | + |
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Preference number: 1 (lower is better) Translates to: KHAQGTSTQIPHDKF*QSHRMAGRTLPPET Trigger: CGTCTCAGGAGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAATTTGTCATGAGGGATTTGTGTTGAAGTACCCTGGGCATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR TCA 90 bp | GCAAGTATAAAAACATGCCCAGGGTACTTCAACACAAATCCCTCATaGCAAATTCTGCCAAAGCCACAGGATGGCAGGCAGAACTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: ASIKTCPGYFNTNPS*QILPKPQDGRQNSS Trigger: GGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAATTTGTCATGAGGGATTTGTGTTGAAGTACCCTGGGCATGTTTTTATACTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR TCA 90 bp | AAATCCAGGCGGCAAGCTCAGTGTGGTGGTAGAGCAGACAGGTCATaGGTTCAAGGCCACTATGTCAACATTTTCAAACAAGATACAGAG | + |
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Preference number: 1 (lower is better) Translates to: KSRRQAQCGGRADRS*VQGHYVNIFKQDTE Trigger: CTCTGTATCTTGTTTGAAAATGTTGACATAGTGGCCTTGAACTCATGACCTGTCTGCTCTACCACCACACTGAGCTTGCCGCCTGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR GCA 90 bp | CCACACAGTGCTACTGCTGGGCTATTTCTCAATGCATCTAAAGCATaGTCTGCTGTGTGTGTTTCACTGCATAATCCAAACCTCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PHSATAGLFLNASKA*SAVCVSLHNPNLFL Trigger: CAGGAAGAGGTTTGGATTATGCAGTGAAACACACACAGCAGAGCATGCTTTAGATGCATTGAGAAATAGCCCAGCAGTAGCACTGTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR GCA 90 bp | ATCCCAGATCTAACTGTCCTGCATTTCACTTGCAGTGGGGAAGAATaGCTACCAGCTGTAAAAACTCCCTTGTACACACCAGTGTATGAT | + |
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Preference number: 1 (lower is better) Translates to: IPDLTVLHFTCSGEE*LPAVKTPLYTPVYD Trigger: ATCATACACTGGTGTGTACAAGGGAGTTTTTACAGCTGGTAGGCATTCTTCCCCACTGCAAGTGAAATGCAGGACAGTTAGATCTGGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR GCA 90 bp | TATTTCTCAATGCATCTAAAGCATGCTCTGCTGTGTGTGTTTCACTaGATAATCCAAACCTCTTCCTGGTTAGCTCTTCCTGCTCATGGT | + |
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Preference number: 1 (lower is better) Translates to: YFSMHLKHALLCVFH*IIQTSSWLALPAHG Trigger: ACCATGAGCAGGAAGAGCTAACCAGGAAGAGGTTTGGATTATGCAGTGAAACACACACAGCAGAGCATGCTTTAGATGCATTGAGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR CCA 90 bp | TTGGAGATAGCATGTCCTCTTTCCAAGGCCAACACTGAGACAATCTaGGAGATTAATATCTTGAGTTCATTGCATGTGACATTTACAATG | + |
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Preference number: 1 (lower is better) Translates to: LEIACPLSKANTETI*EINILSSLHVTFTM Trigger: CATTGTAAATGTCACATGCAATGAACTCAAGATATTAATCTCCCAGATTGTCTCAGTGTTGGCCTTGGAAAGAGGACATGCTATCTCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR TCA 90 bp | GACAAATTCTGCCAAAGCCACAGGATGGCAGGCAGAACTCTTCCTCCTGAGACGTGGAACGCTGCTCAATaGGAAGGGCTGAACAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: DKFCQSHRMAGRTLPPETWNAAQ*EGLNSQ Trigger: TTGACTGTTCAGCCCTTCTCATTGAGCAGCGTTCCA...CGTCTCAGGAGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAATTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCCAAAGCCACAGGATGGCAGGCAGAACTCTTCCTCCTGAGACGGGGACACTGTGTGTGTTTCACTaGATAATCCAAACCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: FCQSHRMAGRTLPPETGTLCVFH*IIQTSS Trigger: GGAAGAGGTTTGGATTATGCAGTGAAACACACACAG...TGTCCCCGTCTCAGGAGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR GCA 90 bp | CAGGTGGCCTTCAAGACAAGCTGTGGTACAGCTAGAAAATGGAACGCTGCTCAAGTCCTGCATTTCACTTaGAGTGGGGAAGAATGCCTA | + |
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Preference number: 2 (lower is better) Translates to: QVAFKTSCGTARKWNAAQVLHFT*SGEECL Trigger: TAGGCATTCTTCCCCACTGCAAGTGAAATGCAGGAC...TTGAGCAGCGTTCCATTTTCTAGCTGTACCACAGCTTGTCTTGAAGGCCACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCTATTTCTCAATGCATCTAAAGCATGCTCTGCTGTGTGTGTTTCACTGCCAAGCAGGGATGGACTaGAAGAGTCCTGATCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LGYFSMHLKHALLCVFHCQAGMD*KSPDPR Trigger: TCTGGGATCAGGACTCTTGCAGTCCATCCCTGCTTG...GCAGTGAAACACACACAGCAGAGCATGCTTTAGATGCATTGAGAAATAGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR GCA 90 bp | GCTCTCTGGTATCCAGAGGAATTAAAACACACAGGGAAACCTGCTACAGACATTAACCGGGTCAGTGGGTaGCAAGGGATTAGAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: ALWYPEELKHTGKPATDINRVSG*QGIRGS Trigger: GCTTCCTCTAATCCCTTGGCACCCACTGACCCGGTT...AATGTCTGTAGCAGGTTTCCCTGTGTGTTTTAATTCCTCTGGATACCAGAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR TCA 90 bp | TTGCTTCAAACTCCCAAACTCAGAAGCAGTCCAGGTGGCCTTCAAGACAAGCTGATCCTCTGCAGATCGTaGAGATATACCAGCACAGAA | + |
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Preference number: 2 (lower is better) Translates to: LLQTPKLRSSPGGLQDKLILCRS*RYTSTE Trigger: TTCTGTGCTGGTATATCTTCACGATCTGCAGAGGAT...CAGCTTGTCTTGAAGGCCACCTGGACTGCTTCTGAGTTTGGGAGTTTGAAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR GCA 90 bp | GACAAATTCTGCCAAAGCCACAGGATGGCAGGCAGAACTCTTCCTCCTGAGACGAATGCATCTAAAGCATaGTCTGCTGTGTGTGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: DKFCQSHRMAGRTLPPETNASKA*SAVCVS Trigger: TGAAACACACACAGCAGAGCATGCTTTAGATGCATT...CGTCTCAGGAGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAATTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR TCA 90 bp | TTGCTTCAAACTCCCAAACTCAGAAGCAGTCCAGGTGGCCTTCAAGACAAGCTGCGAAGGTTAGACAAATaGCAAAATGCACAAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: LLQTPKLRSSPGGLQDKLRRLDK*QNAQEW Trigger: CCACTCTTGTGCATTTTGTCATTTGTCTAACCTTCG...CAGCTTGTCTTGAAGGCCACCTGGACTGCTTCTGAGTTTGGGAGTTTGAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR CCA 90 bp | ACACAAATCCCTCATGACAAATTCTGCCAAAGCCACAGGATGGCAGGCAGAACTATCCAAACCTCTTCCTaGTTAGCTCTTCCTGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: TQIPHDKFCQSHRMAGRTIQTSS*LALPAH Trigger: ATGAGCAGGAAGAGCTAACCAGGAAGAGGTTTGGAT...AGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAATTTGTCATGAGGGATTTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR TCA 90 bp | GCAATCCTTAAATCCTCTGCAGATCGTGAAGATATACCAGCACAGAACCCTCTCAGATACAAGAAATGGTaGCTCCTCAGAGGCCAGATA | + |
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Preference number: 2 (lower is better) Translates to: AILKSSADREDIPAQNPLRYKKW*LLRGQI Trigger: TATCTGGCCTCTGAGGAGTCACCATTTCTTGTATCT...GAGAGGGTTCTGTGCTGGTATATCTTCACGATCTGCAGAGGATTTAAGGATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCTATTTCTCAATGCATCTAAAGCATGCTCTGCTGTGTGTGTTTCACTGCAGACAAATGACAAAATaGACAAGAGTGGCCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: LGYFSMHLKHALLCVFHCRQMTK*TRVAPT Trigger: TGTGGGGGCCACTCTTGTGCATTTTGTCATTTGTCT...GCAGTGAAACACACACAGCAGAGCATGCTTTAGATGCATTGAGAAATAGCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR TCA 90 bp | CCTTTTGGCCCTTCTTGGCTGCATCTTTCACAGACCGTTTTACTTTCTCTTCTTATGTTTTGTATGTTGTaGAAATCAGAAGGGGCGTGT | + |
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Preference number: 2 (lower is better) Translates to: PFGPSWLHLSQTVLLSLLMFCML*KSEGAC Trigger: ACACGCCCCTTCTGATTTTCACAACATACAAAACAT...AAGAAGAGAAAGTAAAACGGTCTGTGAAAGATGCAGCCAAGAAGGGCCAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000132917.8 |
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| 3UTR-3UTR GCA 90 bp | TATAAAAACATGCCCAGGGTACTTCAACACAAATCCCTCATGACAAATTCTGCCGAAAATGGATTTCTTTaGCCTCCCCCAAGGAAGATA | + |
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Preference number: 2 (lower is better) Translates to: YKNMPRVLQHKSLMTNSAENGFL*PPPRKI Trigger: TATCTTCCTTGGGGGAGGGCAAAGAAATCCATTTTC...GGCAGAATTTGTCATGAGGGATTTGTGTTGAAGTACCCTGGGCATGTTTTTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR CAA 90 bp | CCTCTTTCCAAGGCCAACACTGAGACAATCTGGGAGATTAATATCTaGAGTTCATTGCATGTGACATTTACAATGAGACCAAGAGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: PLSKANTETIWEINI*SSLHVTFTMRPRAK Trigger: TTTAGCTCTTGGTCTCATTGTAAATGTCACATGCAATGAACTCAAGATATTAATCTCCCAGATTGTCTCAGTGTTGGCCTTGGAAAGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCTGGTATCCAGAGGAATTAAAACACACAGGGAAACCTGCTACAGACATTAACACTGAGACAATCTaGGAGATTAATATCTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: ALWYPEELKHTGKPATDINTETI*EINILS Trigger: ACTCAAGATATTAATCTCCCAGATTGTCTCAGTGTT...AATGTCTGTAGCAGGTTTCCCTGTGTGTTTTAATTCCTCTGGATACCAGAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR TCA 72 bp | CCAAAGCCACAGGATGGCAGGCAGAACTCTTCCTCCTaGGACGGGGACAGTACGTGCTCTGCACGGCTGGTT | + |
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Preference number: 3 (lower is better) Translates to: PKPQDGRQNSSS*DGDSTCSARLV Trigger: AACCAGCCGTGCAGAGCACGTACTGTCCCCGTCTCAGGAGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR CCA 72 bp | GGAAGACATACTGAAAGGCTGGGAAAGGAAAGCCCATaGAGACAGCAACCGGGTCAGTGGGTGCCAAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: GRHTERLGKESP*RQQPGQWVPRD Trigger: ATCCCTTGGCACCCACTGACCCGGTTGCTGTCTCCATGGGCTTTCCTTTCCCAGCCTTTCAGTATGTCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR CAA 90 bp | AGGGTGAGTCTTCCATACCTTGGCACTTCTCTCTGGAAATGTCCAGTGGTGTCTGAGGACACCAGAGAGTaGAGACCCCCAACTGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: RVSLPYLGTSLWKCPVVSEDTRE*RPPTGW Trigger: CCACCCAGTTGGGGGTCTCAACTCTCTGGTGTCCTC...AGACACCACTGGACATTTCCAGAGAGAAGTGCCAAGGTATGGAAGACTCACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| 3UTR-3UTR CAA 90 bp | ACACAAATCCCTCATGACAAATTCTGCCAAAGCCACAGGATGGCAGGCAGAACTGAGGACACCAGAGAGTaGAGACCCCCAACTGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: TQIPHDKFCQSHRMAGRTEDTRE*RPPTGW Trigger: CCACCCAGTTGGGGGTCTCAACTCTCTGGTGTCCTC...AGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAATTTGTCATGAGGGATTTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR CCA 72 bp | GTCCCTGGGTACAAGACACTTAGCTCCAAGCAGGGATaGACTGCAAGAGTCCTGATCCCAGATCTAACTGTC | + |
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Preference number: 3 (lower is better) Translates to: VPGYKTLSSKQG*TARVLIPDLTV Trigger: GACAGTTAGATCTGGGATCAGGACTCTTGCAGTCCATCCCTGCTTGGAGCTAAGTGTCTTGTACCCAGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR CCA 72 bp | AAATCCCTCATGACAAATTCTGCCAAAGCCACAGGATaGCAGGCAGAACTCTTCCTCCTGAGACGGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: KSLMTNSAKATG*QAELFLLRRGQ Trigger: CTGTCCCCGTCTCAGGAGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAATTTGTCATGAGGGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR CAA 90 bp | TTCTGCCAAAGCCACAGGATGGCAGGCAGAACTCTTCCTCCTGAGACGGGGACAAACCTGCTACAGACATaGCTTCAAACTCCCAAACTC | + |
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Preference number: 3 (lower is better) Translates to: FCQSHRMAGRTLPPETGTNLLQT*LQTPKL Trigger: GAGTTTGGGAGTTTGAAGCAATGTCTGTAGCAGGTT...TGTCCCCGTCTCAGGAGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR CCA 72 bp | GAGAGGGTGAGTCTTCCATACCTTGGCACTTCTCTCTaGAAATGTCCAGTGGTGTCTCTCAGTCTAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: ERVSLPYLGTSL*KCPVVSLSLEE Trigger: CTCCTCTAGACTGAGAGACACCACTGGACATTTCCAGAGAGAAGTGCCAAGGTATGGAAGACTCACCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| 3UTR TCA 72 bp | CAACCCAAAAGAGGAAAGACACTACTTAGCTCAGTCTaGGCCCAGGGCTGGTGGGCATTTCAGTTTTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: QPKRGKTLLSSV*AQGWWAFQFFL Trigger: AAGGAAAAACTGAAATGCCCACCAGCCCTGGGCTCAGACTGAGCTAAGTAGTGTCTTTCCTCTTTTGGGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| 3UTR TCA 72 bp | AAAACATGCCCAGGGTACTTCAACACAAATCCCTCATaGCAAATTCTGCCAAAGCCACAGGATGGCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: KTCPGYFNTNPS*QILPKPQDGRQ Trigger: CTGCCTGCCATCCTGTGGCTTTGGCAGAATTTGTCATGAGGGATTTGTGTTGAAGTACCCTGGGCATGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR GCA 72 bp | CAGGGTACTTCAACACAAATCCCTCATGACAAATTCTaGCAAAGCCACAGGATGGCAGGCAGAACTCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: QGTSTQIPHDKF*QSHRMAGRTLP Trigger: AGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAATTTGTCATGAGGGATTTGTGTTGAAGTACCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR GCA 72 bp | GTCCTGATCCCAGATCTAACTGTCCTGCATTTCACTTaGAGTGGGGAAGAATGCCTACCAGCTGTAAAAACT | + |
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Preference number: 3 (lower is better) Translates to: VLIPDLTVLHFT*SGEECLPAVKT Trigger: AGTTTTTACAGCTGGTAGGCATTCTTCCCCACTGCAAGTGAAATGCAGGACAGTTAGATCTGGGATCAGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR CCA 72 bp | GATCCCAGATCTAACTGTCCTGCATTTCACTTGCAGTaGGGAAGAATGCCTACCAGCTGTAAAAACTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: DPRSNCPAFHLQ*GRMPTSCKNSL Trigger: AAGGGAGTTTTTACAGCTGGTAGGCATTCTTCCCCACTGCAAGTGAAATGCAGGACAGTTAGATCTGGGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR CAA 90 bp | CAAACTGCTCCACACAGTGCTACTGCTGGGCTATTTCTCAATGCATCTAAAGCAAGAAAATGGATTTCTTaGCCCTCCCCCAAGGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: QTAPHSATAGLFLNASKARKWIS*PSPKED Trigger: ATCTTCCTTGGGGGAGGGCAAAGAAATCCATTTTCT...TGCTTTAGATGCATTGAGAAATAGCCCAGCAGTAGCACTGTGTGGAGCAGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR GCA 72 bp | GGAATTAAAACACACAGGGAAACCTGCTACAGACATTaGTTCAAACTCCCAAACTCAGAAGCAGTCCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: GIKTHRETCYRH*FKLPNSEAVQV Trigger: CACCTGGACTGCTTCTGAGTTTGGGAGTTTGAAGCAATGTCTGTAGCAGGTTTCCCTGTGTGTTTTAATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR CCA 72 bp | ATTGCTTCAAACTCCCAAACTCAGAAGCAGTCCAGGTaGCCTTCAAGACAAGCTGTGGTACAGCTAGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: IASNSQTQKQSR*PSRQAVVQLEN Trigger: ATTTTCTAGCTGTACCACAGCTTGTCTTGAAGGCCACCTGGACTGCTTCTGAGTTTGGGAGTTTGAAGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR-3UTR CAA 90 bp | TTGCTTCAAACTCCCAAACTCAGAAGCAGTCCAGGTGGCCTTCAAGACAAGCTGTGGGAGATTAATATCTaGAGTTCATTGCATGTGACA | + |
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Preference number: 3 (lower is better) Translates to: LLQTPKLRSSPGGLQDKLWEINI*SSLHVT Trigger: TGTCACATGCAATGAACTCAAGATATTAATCTCCCA...CAGCTTGTCTTGAAGGCCACCTGGACTGCTTCTGAGTTTGGGAGTTTGAAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR GCA 72 bp | GCTACTGCTGGGCTATTTCTCAATGCATCTAAAGCATaGTCTGCTGTGTGTGTTTCACTGCATAATCCAAAC | + |
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Preference number: 3 (lower is better) Translates to: ATAGLFLNASKA*SAVCVSLHNPN Trigger: GTTTGGATTATGCAGTGAAACACACACAGCAGAGCATGCTTTAGATGCATTGAGAAATAGCCCAGCAGTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| 3UTR GCA 72 bp | GGCATTTCAGTTTTTCCTTTTATTCCTCCTATAACCTaGTATGAGAGGGTGAGTCTTCCATACCTTGGCACT | + |
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Preference number: 3 (lower is better) Translates to: GISVFPFIPPIT*YERVSLPYLGT Trigger: AGTGCCAAGGTATGGAAGACTCACCCTCTCATAGCAGGTTATAGGAGGAATAAAAGGAAAAACTGAAATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| 3UTR-3UTR CAA 90 bp | CCTTTTGGCCCTTCTTGGCTGCATCTTTCACAGACCGTTTTACTTTCTCTTCTTCCCGGTGTAGATGTTTaGTATGTTGTGAAAATCAGA | + |
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Preference number: 3 (lower is better) Translates to: PFGPSWLHLSQTVLLSLLPGVDV*YVVKIR Trigger: TCTGATTTTCACAACATACAAAACATCTACACCGGG...AAGAAGAGAAAGTAAAACGGTCTGTGAAAGATGCAGCCAAGAAGGGCCAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132917.8 |
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| 3UTR TCA 72 bp | TTCAGTTTTTCCTTTTATTCCTCCTATAACCTGCTATaGGAGGGTGAGTCTTCCATACCTTGGCACTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: FSFSFYSSYNLL*EGESSIPWHFS Trigger: AGAGAAGTGCCAAGGTATGGAAGACTCACCCTCTCATAGCAGGTTATAGGAGGAATAAAAGGAAAAACTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| 3UTR TCA 72 bp | GGCACGTGTTACTTTAATCATCTGAGACCAAACACTTaGCAAAAATCAACCCAAAAGAGGAAAGACACTACT | + |
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Preference number: 3 (lower is better) Translates to: GTCYFNHLRPNT*QKSTQKRKDTT Trigger: AGTAGTGTCTTTCCTCTTTTGGGTTGATTTTTGTCAAGTGTTTGGTCTCAGATGATTAAAGTAACACGTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR TCA 90 bp | CACAAGAGTGGCCCCCACAACCAGCCTGTGAAGAGCAGGACCAGCGGCCCCGGAGAGTGTGGCCAGCCGTaGCTGCATAGCCTCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: HKSGPHNQPVKSRTSGPGECGQP*LHSLQV Trigger: GACCTGGAGGCTATGCAGTCACGGCTGGCCACACTC...TCCGGGGCCGCTGGTCCTGCTCTTCACAGGCTGGTTGTGGGGGCCACTCTTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR GCA 90 bp | CACAAGAGTGGCCCCCACAACCAGCCTGTGAAGAGCAGGACCAGCGGCCCCGGAGGTTACTTTACTGGGTaGTTTGCCCAAGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HKSGPHNQPVKSRTSGPGGYFTG*FAQGSC Trigger: GCAGGAGCCTTGGGCAAAGCACCCAGTAAAGTAACC...TCCGGGGCCGCTGGTCCTGCTCTTCACAGGCTGGTTGTGGGGGCCACTCTTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCAAAGCCACAGGATGGCAGGCAGAACTCTTCCTCCTGAGACGGGGACAGGCAGCCATCGCTCCTaGGGGTTCAGGCTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FCQSHRMAGRTLPPETGTGSHRS*GFRLRK Trigger: CTTCCTGAGCCTGAACCCGCAGGAGCGATGGCTGCC...TGTCCCCGTCTCAGGAGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR GCA 90 bp | CACAAGAGTGGCCCCCACAACCAGCCTGTGAAGAGCAGGACCAGCGGCCCCGGACACAAGACTCTGCATTaGCTTCATCACTTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HKSGPHNQPVKSRTSGPGHKTLH*LHHFCA Trigger: AGCACAGAAGTGATGAAGGCAATGCAGAGTCTTGTG...TCCGGGGCCGCTGGTCCTGCTCTTCACAGGCTGGTTGTGGGGGCCACTCTTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR CCA 90 bp | TTCTGCCAAAGCCACAGGATGGCAGGCAGAACTCTTCCTCCTGAGACGGGGACATGGACAGCTCCCGCATaGTGGCCTGGATTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FCQSHRMAGRTLPPETGTWTAPA*WPGFLG Trigger: TCCCAGAAATCCAGGCCACCATGCGGGAGCTGTCCA...TGTCCCCGTCTCAGGAGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR TCA 90 bp | CACAAGAGTGGCCCCCACAACCAGCCTGTGAAGAGCAGGACCAGCGGCCCCGGACTTTCTGATCTTCAGTaGCCATTCATTAACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HKSGPHNQPVKSRTSGPGLSDLQ*PFINQL Trigger: GAGCTGGTTAATGAATGGTCACTGAAGATCAGAAAG...TCCGGGGCCGCTGGTCCTGCTCTTCACAGGCTGGTTGTGGGGGCCACTCTTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR TCA 90 bp | GAGAGGGTGAGTCTTCCATACCTTGGCACTTCTCTCTGGAAATGTCCAGTGGTGCGGCTTTCCTTGACCTaGTCATCTCCTTGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLPYLGTSLWKCPVVRLSLT*SSPWPE Trigger: TTCTGGCCAAGGAGATGATCAGGTCAAGGAAAGCCG...CACCACTGGACATTTCCAGAGAGAAGTGCCAAGGTATGGAAGACTCACCCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR GCA 90 bp | GCAATCCTTAAATCCTCTGCAGATCGTGAAGATATACCAGCACAGAACCCTCTCGTGGCCAGCCGTGACTaGATAGCCTCCAGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AILKSSADREDIPAQNPLVASRD*IASRSS Trigger: AGAGGACCTGGAGGCTATGCAGTCACGGCTGGCCAC...GAGAGGGTTCTGTGCTGGTATATCTTCACGATCTGCAGAGGATTTAAGGATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCAAAGCCACAGGATGGCAGGCAGAACTCTTCCTCCTGAGACGGGGACACTAACATCTCCTCTATaGTTCCAGCCTTCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: FCQSHRMAGRTLPPETGTLTSPL*FQPSSS Trigger: AGATGATGAAGGCTGGAATCATAGAGGAGATGTTAG...TGTCCCCGTCTCAGGAGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCAAAGCCACAGGATGGCAGGCAGAACTCTTCCTCCTGAGACGGGGACAAATCTCCATCTCAGCTaGTTCTTCCATTTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FCQSHRMAGRTLPPETGTNLHLS*FFHFFL Trigger: CAAGAAGAAATGGAAGAAGCAGCTGAGATGGAGATT...TGTCCCCGTCTCAGGAGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGTGAGTCTTCCATACCTTGGCACTTCTCTCTGGAAATGTCCAGTGGTGACACAGACTTCCTTTTaGCCCTTCTTGGCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLPYLGTSLWKCPVVTQTSF*PFLAAS Trigger: AGATGCAGCCAAGAAGGGCCAAAAGGAAGTCTGTGT...CACCACTGGACATTTCCAGAGAGAAGTGCCAAGGTATGGAAGACTCACCCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR CCA 90 bp | TTGCTTCAAACTCCCAAACTCAGAAGCAGTCCAGGTGGCCTTCAAGACAAGCTGCATCGGTTACTTTACTaGGTGCTTTGCCCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLQTPKLRSSPGGLQDKLHRLLY*VLCPRL Trigger: GAGCCTTGGGCAAAGCACCCAGTAAAGTAACCGATG...CAGCTTGTCTTGAAGGCCACCTGGACTGCTTCTGAGTTTGGGAGTTTGAAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
||
| CDS-3UTR TCA 90 bp | CTGGGCTATTTCTCAATGCATCTAAAGCATGCTCTGCTGTGTGTGTTTCACTGCCGGCTTTCCTTGACCTaGTCATCTCCTTGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGYFSMHLKHALLCVFHCRLSLT*SSPWPE Trigger: TTCTGGCCAAGGAGATGATCAGGTCAAGGAAAGCCG...GCAGTGAAACACACACAGCAGAGCATGCTTTAGATGCATTGAGAAATAGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR GCA 90 bp | GAGACCAAACACTTGACAAAAATCAACCCAAAAGAGGAAAGACACTACTTAGCTGGCAGCCATCGCTCCTaGGGGTTCAGGCTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETKHLTKINPKEERHYLAGSHRS*GFRLRK Trigger: CTTCCTGAGCCTGAACCCGCAGGAGCGATGGCTGCC...AGCTAAGTAGTGTCTTTCCTCTTTTGGGTTGATTTTTGTCAAGTGTTTGGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR TCA 90 bp | CACAGGGAAACCTGCTACAGACATTGCTTCAAACTCCCAAACTCAGAAGCAGTCCCAAGGCTCCTGCTGTaGTTTCAAAGAGGATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HRETCYRHCFKLPNSEAVPRLLL*FQRGFC Trigger: ACAGAATCCTCTTTGAAATCACAGCAGGAGCCTTGG...GACTGCTTCTGAGTTTGGGAGTTTGAAGCAATGTCTGTAGCAGGTTTCCCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR TCA 90 bp | TCTGAGACCAAACACTTGACAAAAATCAACCCAAAAGAGGAAAGACACTACTTAGAGTGTGGCCAGCCGTaGCTGCATAGCCTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SETKHLTKINPKEERHYLECGQP*LHSLQV Trigger: GACCTGGAGGCTATGCAGTCACGGCTGGCCACACTC...TAAGTAGTGTCTTTCCTCTTTTGGGTTGATTTTTGTCAAGTGTTTGGTCTCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR GCA 90 bp | GAGACCAAACACTTGACAAAAATCAACCCAAAAGAGGAAAGACACTACTTAGCTGTGGCCAGCCGTGACTaGATAGCCTCCAGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETKHLTKINPKEERHYLAVASRD*IASRSS Trigger: AGAGGACCTGGAGGCTATGCAGTCACGGCTGGCCAC...AGCTAAGTAGTGTCTTTCCTCTTTTGGGTTGATTTTTGTCAAGTGTTTGGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR CCA 90 bp | CCACACAGTGCTACTGCTGGGCTATTTCTCAATGCATCTAAAGCATGCTCTGCTACACAGACTTCCTTTTaGCCCTTCTTGGCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PHSATAGLFLNASKACSATQTSF*PFLAAS Trigger: AGATGCAGCCAAGAAGGGCCAAAAGGAAGTCTGTGT...AGCAGAGCATGCTTTAGATGCATTGAGAAATAGCCCAGCAGTAGCACTGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR CCA 90 bp | GCTCTCTGGTATCCAGAGGAATTAAAACACACAGGGAAACCTGCTACAGACATTCCTTCATCATCTCTTTaGACAGCTCCCGCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALWYPEELKHTGKPATDIPSSSL*TAPAWW Trigger: CCACCATGCGGGAGCTGTCCAAAGAGATGATGAAGG...AATGTCTGTAGCAGGTTTCCCTGTGTGTTTTAATTCCTCTGGATACCAGAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR TCA 90 bp | GTCTTCCATACCTTGGCACTTCTCTCTGGAAATGTCCAGTGGTGTCTCTCAGTCCTTTCTGATCTTCAGTaGCCATTCATTAACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFHTLALLSGNVQWCLSVLSDLQ*PFINQL Trigger: GAGCTGGTTAATGAATGGTCACTGAAGATCAGAAAG...GACTGAGAGACACCACTGGACATTTCCAGAGAGAAGTGCCAAGGTATGGAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR GCA 90 bp | CCTTTTATTCCTCCTATAACCTGCTATGAGAGGGTGAGTCTTCCATACCTTGGCTTGGCCCTTCTTGGCTaGATCTTTCACAGACCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PFIPPITCYERVSLPYLGLALLG*IFHRPF Trigger: AAACGGTCTGTGAAAGATGCAGCCAAGAAGGGCCAA...GCCAAGGTATGGAAGACTCACCCTCTCATAGCAGGTTATAGGAGGAATAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR GCA 90 bp | CCACACAGTGCTACTGCTGGGCTATTTCTCAATGCATCTAAAGCATGCTCTGCTCACAGAGTTCATGTGTaGTTTGGAGGCATAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PHSATAGLFLNASKACSAHRVHV*FGGIEL Trigger: AAGCTCTATGCCTCCAAAGCACACATGAACTCTGTG...AGCAGAGCATGCTTTAGATGCATTGAGAAATAGCCCAGCAGTAGCACTGTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR GCA 90 bp | TGTGTGTTTCACTGCATAATCCAAACCTCTTCCTGGTTAGCTCTTCCTGCTCATACTTCTGTGCTCTTCTaGAGAGAACCAGCTACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CVFHCIIQTSSWLALPAHTSVLF*REPATR Trigger: GCGAGTAGCTGGTTCTCTGCAGAAGAGCACAGAAGT...ATGAGCAGGAAGAGCTAACCAGGAAGAGGTTTGGATTATGCAGTGAAACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR GCA 90 bp | GCTCTCTGGTATCCAGAGGAATTAAAACACACAGGGAAACCTGCTACAGACATTTTGGCCCTTCTTGGCTaGATCTTTCACAGACCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALWYPEELKHTGKPATDILALLG*IFHRPF Trigger: AAACGGTCTGTGAAAGATGCAGCCAAGAAGGGCCAA...AATGTCTGTAGCAGGTTTCCCTGTGTGTTTTAATTCCTCTGGATACCAGAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR GCA 90 bp | CAGGTGGCCTTCAAGACAAGCTGTGGTACAGCTAGAAAATGGAACGCTGCTCAAATCTTCACAAGACTCTaGATTGCCTTCATCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVAFKTSCGTARKWNAAQIFTRL*IAFITS Trigger: AGAAGTGATGAAGGCAATGCAGAGTCTTGTGAAGAT...TTGAGCAGCGTTCCATTTTCTAGCTGTACCACAGCTTGTCTTGAAGGCCACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR CCA 90 bp | AGACAGGTCATGAGTTCAAGGCCACTATGTCAACATTTTCAAACAAGATACAGAACAGCTCCCGCATGGTaGCCTGGATTTCTGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: RQVMSSRPLCQHFQTRYRTAPAW*PGFLGS Trigger: AGATCCCAGAAATCCAGGCCACCATGCGGGAGCTGT...TCTGTATCTTGTTTGAAAATGTTGACATAGTGGCCTTGAACTCATGACCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR GCA 90 bp | AGACAGGTCATGAGTTCAAGGCCACTATGTCAACATTTTCAAACAAGATACAGATGGAGGCATAGAGCTTaGTCACGGCTTTCCTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: RQVMSSRPLCQHFQTRYRWRHRA*SRLSLT Trigger: GGTCAAGGAAAGCCGTGAGCAAGCTCTATGCCTCCA...TCTGTATCTTGTTTGAAAATGTTGACATAGTGGCCTTGAACTCATGACCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR GCA 90 bp | GACCAAACACTTGACAAAAATCAACCCAAAAGAGGAAAGACACTACTTAGCTCAGGTTACTTTACTGGGTaGTTTGCCCAAGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DQTLDKNQPKRGKTLLSSGYFTG*FAQGSC Trigger: GCAGGAGCCTTGGGCAAAGCACCCAGTAAAGTAACC...TGAGCTAAGTAGTGTCTTTCCTCTTTTGGGTTGATTTTTGTCAAGTGTTTGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR CCA 90 bp | TCTGAGACCAAACACTTGACAAAAATCAACCCAAAAGAGGAAAGACACTACTTAACAGCTCCCGCATGGTaGCCTGGATTTCTGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SETKHLTKINPKEERHYLTAPAW*PGFLGS Trigger: AGATCCCAGAAATCCAGGCCACCATGCGGGAGCTGT...TAAGTAGTGTCTTTCCTCTTTTGGGTTGATTTTTGTCAAGTGTTTGGTCTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR CCA 90 bp | GAGACCAAACACTTGACAAAAATCAACCCAAAAGAGGAAAGACACTACTTAGCTCCTTCATCATCTCTTTaGACAGCTCCCGCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETKHLTKINPKEERHYLAPSSSL*TAPAWW Trigger: CCACCATGCGGGAGCTGTCCAAAGAGATGATGAAGG...AGCTAAGTAGTGTCTTTCCTCTTTTGGGTTGATTTTTGTCAAGTGTTTGGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR TCA 90 bp | CCTTTTGGCCCTTCTTGGCTGCATCTTTCACAGACCGTTTTACTTTCTCTTCTTCTTTCTGATCTTCAGTaGCCATTCATTAACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PFGPSWLHLSQTVLLSLLLSDLQ*PFINQL Trigger: GAGCTGGTTAATGAATGGTCACTGAAGATCAGAAAG...AAGAAGAGAAAGTAAAACGGTCTGTGAAAGATGCAGCCAAGAAGGGCCAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132917.8 |
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| CDS-3UTR TCA 90 bp | TTTCCTTTTATTCCTCCTATAACCTGCTATGAGAGGGTGAGTCTTCCATACCTTCCAAGGCTCCTGCTGTaGTTTCAAAGAGGATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPFIPPITCYERVSLPYLPRLLL*FQRGFC Trigger: ACAGAATCCTCTTTGAAATCACAGCAGGAGCCTTGG...AAGGTATGGAAGACTCACCCTCTCATAGCAGGTTATAGGAGGAATAAAAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR GCA 90 bp | GAGACCAAACACTTGACAAAAATCAACCCAAAAGAGGAAAGACACTACTTAGCTACTTCTGTGCTCTTCTaGAGAGAACCAGCTACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ETKHLTKINPKEERHYLATSVLF*REPATR Trigger: GCGAGTAGCTGGTTCTCTGCAGAAGAGCACAGAAGT...AGCTAAGTAGTGTCTTTCCTCTTTTGGGTTGATTTTTGTCAAGTGTTTGGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
||
| CDS-3UTR GCA 90 bp | CACAGGGAAACCTGCTACAGACATTGCTTCAAACTCCCAAACTCAGAAGCAGTCCTTCTTGATCATCCATaGTTTCAAATGTATCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HRETCYRHCFKLPNSEAVLLDHP*FQMYPL Trigger: TAGAGGATACATTTGAAAGCATGGATGATCAAGAAG...GACTGCTTCTGAGTTTGGGAGTTTGAAGCAATGTCTGTAGCAGGTTTCCCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR GCA 90 bp | TGCTATGAGAGGGTGAGTCTTCCATACCTTGGCACTTCTCTCTGGAAATGTCCACTTCTTGATCATCCATaGTTTCAAATGTATCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CYERVSLPYLGTSLWKCPLLDHP*FQMYPL Trigger: TAGAGGATACATTTGAAAGCATGGATGATCAAGAAG...TGGACATTTCCAGAGAGAAGTGCCAAGGTATGGAAGACTCACCCTCTCATAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR CCA 90 bp | ATTTCAGTTTTTCCTTTTATTCCTCCTATAACCTGCTATGAGAGGGTGAGTCTTCATCGGTTACTTTACTaGGTGCTTTGCCCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISVFPFIPPITCYERVSLHRLLY*VLCPRL Trigger: GAGCCTTGGGCAAAGCACCCAGTAAAGTAACCGATG...AAGACTCACCCTCTCATAGCAGGTTATAGGAGGAATAAAAGGAAAAACTGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR GCA 90 bp | ATTCCTCCTATAACCTGCTATGAGAGGGTGAGTCTTCCATACCTTGGCACTTCTTGGATATCTCTTATTTaGCTGTCAACAACTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: IPPITCYERVSLPYLGTSWISLI*LSTTLI Trigger: AATGAGAGTTGTTGACAGGCAAATAAGAGATATCCA...AGAAGTGCCAAGGTATGGAAGACTCACCCTCTCATAGCAGGTTATAGGAGGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR GCA 90 bp | CAAACACTTGACAAAAATCAACCCAAAAGAGGAAAGACACTACTTAGCTCAGTCCACAGAGTTCATGTGTaGTTTGGAGGCATAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTLDKNQPKRGKTLLSSVHRVHV*FGGIEL Trigger: AAGCTCTATGCCTCCAAAGCACACATGAACTCTGTG...GACTGAGCTAAGTAGTGTCTTTCCTCTTTTGGGTTGATTTTTGTCAAGTGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
||
| CDS-3UTR TCA 90 bp | CAAACACTTGACAAAAATCAACCCAAAAGAGGAAAGACACTACTTAGCTCAGTCCTAACATCTCCTCTATaGTTCCAGCCTTCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLDKNQPKRGKTLLSSVLTSPL*FQPSSS Trigger: AGATGATGAAGGCTGGAATCATAGAGGAGATGTTAG...GACTGAGCTAAGTAGTGTCTTTCCTCTTTTGGGTTGATTTTTGTCAAGTGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
||
| CDS-3UTR GCA 90 bp | TCTGAGACCAAACACTTGACAAAAATCAACCCAAAAGAGGAAAGACACTACTTACACAAGACTCTGCATTaGCTTCATCACTTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SETKHLTKINPKEERHYLHKTLH*LHHFCA Trigger: AGCACAGAAGTGATGAAGGCAATGCAGAGTCTTGTG...TAAGTAGTGTCTTTCCTCTTTTGGGTTGATTTTTGTCAAGTGTTTGGTCTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTTTATTCCTCCTATAACCTGCTATGAGAGGGTGAGTCTTCCATACCTTATCTTCACAAGACTCTaGATTGCCTTCATCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPFIPPITCYERVSLPYLIFTRL*IAFITS Trigger: AGAAGTGATGAAGGCAATGCAGAGTCTTGTGAAGAT...AAGGTATGGAAGACTCACCCTCTCATAGCAGGTTATAGGAGGAATAAAAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTTTATTCCTCCTATAACCTGCTATGAGAGGGTGAGTCTTCCATACCTTAATCTCCATCTCAGCTaGTTCTTCCATTTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPFIPPITCYERVSLPYLNLHLS*FFHFFL Trigger: CAAGAAGAAATGGAAGAAGCAGCTGAGATGGAGATT...AAGGTATGGAAGACTCACCCTCTCATAGCAGGTTATAGGAGGAATAAAAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
||
| 3UTR CAA 72 bp | AAGGCCAACACTGAGACAATCTGGGAGATTAATATCTaGAGTTCATTGCATGTGACATTTACAATGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: KANTETIWEINI*SSLHVTFTMRP Trigger: TGGTCTCATTGTAAATGTCACATGCAATGAACTCAAGATATTAATCTCCCAGATTGTCTCAGTGTTGGCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
||
| CDS-3UTR GCA 90 bp | ACAAACAATCCAGGTTATAAAATGAACAAACACCAACAACGAAGAAATCCAGGCTGGATATCTCTTATTTaGCTGTCAACAACTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: TNNPGYKMNKHQQRRNPGWISLI*LSTTLI Trigger: AATGAGAGTTGTTGACAGGCAAATAAGAGATATCCA...GCCTGGATTTCTTCGTTGTTGGTGTTTGTTCATTTTATAACCTGGATTGTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
||
| 3UTR CAA 72 bp | ACTGAGACAATCTGGGAGATTAATATCTTGAGTTCATaGCATGTGACATTTACAATGAGACCAAGAGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TETIWEINILSS*HVTFTMRPRAK Trigger: TTTAGCTCTTGGTCTCATTGTAAATGTCACATGCAATGAACTCAAGATATTAATCTCCCAGATTGTCTCAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
||
| CDS-3UTR CAA 90 bp | CAAGAGTGGCCCCCACAACCAGCCTGTGAAGAGCAGGACCAGCGGCCCCGGAGCCACACAGACTTCCTTTaGGCCCTTCTTGGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: QEWPPQPACEEQDQRPRSHTDFL*ALLGCI Trigger: GATGCAGCCAAGAAGGGCCAAAAGGAAGTCTGTGTG...GCTCCGGGGCCGCTGGTCCTGCTCTTCACAGGCTGGTTGTGGGGGCCACTCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCAAAGCCACAGGATGGCAGGCAGAACTCTTCCTCCTGAGACGGGGACATCATTAACCAGCTCTTaGGGAGGCTTCTCCTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: FCQSHRMAGRTLPPETGTSLTSS*GGFSWV Trigger: AACCCAGGAGAAGCCTCCCAAAGAGCTGGTTAATGA...TGTCCCCGTCTCAGGAGGAAGAGTTCTGCCTGCCATCCTGTGGCTTTGGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS TCA 90 bp | GAGAACCAGCTACTCGCAGGACCGCGAGTTGGTTCTTCATGCCCATaGGCACAGAGTTCATGTGTGCTTTGGAGGCATAGAGCTTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: ENQLLAGPRVGSSCP*AQSSCVLWRHRACS Trigger: TGAGCAAGCTCTATGCCTCCAAAGCACACATGAACTCTGTGCTCATGGGCATGAAGAACCAACTCGCGGTCCTGCGAGTAGCTGGTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059462.12 ENSMUST00000065364.5 ENSMUST00000204535.2 |
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| CDS TCA 90 bp | TGTGTGCTTTGGAGGCATAGAGCTTGCTCACGGCTTTCCTTGACCTaGTCATCTCCTTGGCCAGAACCACACAGACTTCCTTTTGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: CVLWRHRACSRLSLT*SSPWPEPHRLPFGP Trigger: AGGGCCAAAAGGAAGTCTGTGTGGTTCTGGCCAAGGAGATGATCAGGTCAAGGAAAGCCGTGAGCAAGCTCTATGCCTCCAAAGCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059462.12 ENSMUST00000065364.5 |
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| CDS-3UTR CAA 90 bp | CAGGTGGCCTTCAAGACAAGCTGTGGTACAGCTAGAAAATGGAACGCTGCTCAAGCCTTCATCATCTCTTaGGACAGCTCCCGCATGGTG | + |
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Preference number: 5 (lower is better) Translates to: QVAFKTSCGTARKWNAAQAFIIS*DSSRMV Trigger: CACCATGCGGGAGCTGTCCAAAGAGATGATGAAGGC...TTGAGCAGCGTTCCATTTTCTAGCTGTACCACAGCTTGTCTTGAAGGCCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS TCA 90 bp | GTTCATGTGTGCTTTGGAGGCATAGAGCTTGCTCACGGCTTTCCTTaGCCTGATCATCTCCTTGGCCAGAACCACACAGACTTCCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: VHVCFGGIELAHGFP*PDHLLGQNHTDFLL Trigger: CAAAAGGAAGTCTGTGTGGTTCTGGCCAAGGAGATGATCAGGTCAAGGAAAGCCGTGAGCAAGCTCTATGCCTCCAAAGCACACATGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059462.12 ENSMUST00000065364.5 |
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| CDS-3UTR CAA 90 bp | ATTCCTCCTATAACCTGCTATGAGAGGGTGAGTCTTCCATACCTTGGCACTTCTCACACAGACTTCCTTTaGGCCCTTCTTGGCTGCATC | + |
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Preference number: 5 (lower is better) Translates to: IPPITCYERVSLPYLGTSHTDFL*ALLGCI Trigger: GATGCAGCCAAGAAGGGCCAAAAGGAAGTCTGTGTG...AGAAGTGCCAAGGTATGGAAGACTCACCCTCTCATAGCAGGTTATAGGAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS CCA 90 bp | CTTGACCTGATCATCTCCTTGGCCAGAACCACACAGACTTCCTTTTaGCCCTTCTTGGCTGCATCTTTCACAGACCGTTTTACTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LDLIISLARTTQTSF*PFLAASFTDRFTFS Trigger: AGAGAAAGTAAAACGGTCTGTGAAAGATGCAGCCAAGAAGGGCCAAAAGGAAGTCTGTGTGGTTCTGGCCAAGGAGATGATCAGGTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059462.12 ENSMUST00000065364.5 |
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| CDS-3UTR CAA 90 bp | ATTCCTCCTATAACCTGCTATGAGAGGGTGAGTCTTCCATACCTTGGCACTTCTTCATTAACCAGCTCTTaGGGAGGCTTCTCCTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: IPPITCYERVSLPYLGTSSLTSS*GGFSWV Trigger: AACCCAGGAGAAGCCTCCCAAAGAGCTGGTTAATGA...AGAAGTGCCAAGGTATGGAAGACTCACCCTCTCATAGCAGGTTATAGGAGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS GCA 90 bp | CTCCTTGGCCAGAACCACACAGACTTCCTTTTGGCCCTTCTTGGCTaGATCTTTCACAGACCGTTTTACTTTCTCTTCTTCTCTTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: LLGQNHTDFLLALLG*IFHRPFYFLFFSLD Trigger: ATCCAAAGAGAAGAAGAGAAAGTAAAACGGTCTGTGAAAGATGCAGCCAAGAAGGGCCAAAAGGAAGTCTGTGTGGTTCTGGCCAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059462.12 ENSMUST00000065364.5 |
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| CDS-3UTR CAA 90 bp | CCTTTTGGCCCTTCTTGGCTGCATCTTTCACAGACCGTTTTACTTTCTCTTCTTTCATTAACCAGCTCTTaGGGAGGCTTCTCCTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: PFGPSWLHLSQTVLLSLLSLTSS*GGFSWV Trigger: AACCCAGGAGAAGCCTCCCAAAGAGCTGGTTAATGA...AAGAAGAGAAAGTAAAACGGTCTGTGAAAGATGCAGCCAAGAAGGGCCAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132917.8 |
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| CDS-3UTR CAA 90 bp | CCTTTTATTCCTCCTATAACCTGCTATGAGAGGGTGAGTCTTCCATACCTTGGCTCACAAGACTCTGCATaGCCTTCATCACTTCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: PFIPPITCYERVSLPYLGSQDSA*PSSLLC Trigger: GCACAGAAGTGATGAAGGCAATGCAGAGTCTTGTGA...GCCAAGGTATGGAAGACTCACCCTCTCATAGCAGGTTATAGGAGGAATAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR CAA 90 bp | TCAGTTTTTCCTTTTATTCCTCCTATAACCTGCTATGAGAGGGTGAGTCTTCCAGCCTTCATCATCTCTTaGGACAGCTCCCGCATGGTG | + |
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Preference number: 5 (lower is better) Translates to: SVFPFIPPITCYERVSLPAFIIS*DSSRMV Trigger: CACCATGCGGGAGCTGTCCAAAGAGATGATGAAGGC...TGGAAGACTCACCCTCTCATAGCAGGTTATAGGAGGAATAAAAGGAAAAACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR CAA 90 bp | GAGACCAAACACTTGACAAAAATCAACCCAAAAGAGGAAAGACACTACTTAGCTACTTTACTGGGTGCTTaGCCCAAGGCTCCTGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: ETKHLTKINPKEERHYLATLLGA*PKAPAV Trigger: CACAGCAGGAGCCTTGGGCAAAGCACCCAGTAAAGT...AGCTAAGTAGTGTCTTTCCTCTTTTGGGTTGATTTTTGTCAAGTGTTTGGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR CAA 90 bp | TGCTATGAGAGGGTGAGTCTTCCATACCTTGGCACTTCTCTCTGGAAATGTCCATTGGATATCTCTTATTaGCCTGTCAACAACTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: CYERVSLPYLGTSLWKCPLDISY*PVNNSH Trigger: ATGAGAGTTGTTGACAGGCAAATAAGAGATATCCAA...TGGACATTTCCAGAGAGAAGTGCCAAGGTATGGAAGACTCACCCTCTCATAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065364.5 |
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| CDS-3UTR CAA 90 bp | ACTGAGACAATCTGGGAGATTAATATCTTGAGTTCATTGCATGTGACATTTACAACTTTACTGGGTGCTTaGCCCAAGGCTCCTGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: TETIWEINILSSLHVTFTTLLGA*PKAPAV Trigger: CACAGCAGGAGCCTTGGGCAAAGCACCCAGTAAAGT...TGTAAATGTCACATGCAATGAACTCAAGATATTAATCTCCCAGATTGTCTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR CAA 90 bp | CCTTTTGGCCCTTCTTGGCTGCATCTTTCACAGACCGTTTTACTTTCTCTTCTTCTGAAACCCTCTTATTaGCCTGTCAACAACTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: PFGPSWLHLSQTVLLSLLLKPSY*PVNNSH Trigger: ATGAGAGTTGTTGACAGGCAAATAAGAGGGTTTCAG...AAGAAGAGAAAGTAAAACGGTCTGTGAAAGATGCAGCCAAGAAGGGCCAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132917.8 |
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| CDS-3UTR CAA 90 bp | ACAAACAATCCAGGTTATAAAATGAACAAACACCAACAACGAAGAAATCCAGGCTCACAAGACTCTGCATaGCCTTCATCACTTCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: TNNPGYKMNKHQQRRNPGSQDSA*PSSLLC Trigger: GCACAGAAGTGATGAAGGCAATGCAGAGTCTTGTGA...GCCTGGATTTCTTCGTTGTTGGTGTTTGTTCATTTTATAACCTGGATTGTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS-3UTR CAA 90 bp | TATAAAAACATGCCCAGGGTACTTCAACACAAATCCCTCATGACAAATTCTGCCTTGGATATCTCTTATTaGCCTGTCAACAACTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: YKNMPRVLQHKSLMTNSALDISY*PVNNSH Trigger: ATGAGAGTTGTTGACAGGCAAATAAGAGATATCCAA...GGCAGAATTTGTCATGAGGGATTTGTGTTGAAGTACCCTGGGCATGTTTTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059462.12 |
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| CDS CAA 72 bp | CTTCTGCAGAGAACCAGCTACTCGCAGGACCGCGAGTaGGTTCTTCATGCCCATGAGCACAGAGTTCATGTG | + |
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Preference number: 6 (lower is better) Translates to: LLQRTSYSQDRE*VLHAHEHRVHV Trigger: CACATGAACTCTGTGCTCATGGGCATGAAGAACCAACTCGCGGTCCTGCGAGTAGCTGGTTCTCTGCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059462.12 ENSMUST00000065364.5 ENSMUST00000204535.2 |
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| CDS TCA 72 bp | TGCTTTGGAGGCATAGAGCTTGCTCACGGCTTTCCTTaGCCTGATCATCTCCTTGGCCAGAACCACACAGAC | + |
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Preference number: 6 (lower is better) Translates to: CFGGIELAHGFP*PDHLLGQNHTD Trigger: GTCTGTGTGGTTCTGGCCAAGGAGATGATCAGGTCAAGGAAAGCCGTGAGCAAGCTCTATGCCTCCAAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059462.12 ENSMUST00000065364.5 |
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| CDS TCA 72 bp | CTACTCGCAGGACCGCGAGTTGGTTCTTCATGCCCATaGGCACAGAGTTCATGTGTGCTTTGGAGGCATAGA | + |
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Preference number: 6 (lower is better) Translates to: LLAGPRVGSSCP*AQSSCVLWRHR Trigger: TCTATGCCTCCAAAGCACACATGAACTCTGTGCTCATGGGCATGAAGAACCAACTCGCGGTCCTGCGAGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059462.12 ENSMUST00000065364.5 ENSMUST00000204535.2 |
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| CDS CCA 72 bp | TTCTGCAGAGAACCAGCTACTCGCAGGACCGCGAGTTaGTTCTTCATGCCCATGAGCACAGAGTTCATGTGT | + |
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Preference number: 6 (lower is better) Translates to: FCREPATRRTAS*FFMPMSTEFMC Trigger: ACACATGAACTCTGTGCTCATGGGCATGAAGAACCAACTCGCGGTCCTGCGAGTAGCTGGTTCTCTGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059462.12 ENSMUST00000065364.5 ENSMUST00000204535.2 |
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| CDS CAA 72 bp | GGCTCAGGAAGGGCATCGGTTACTTTACTGGGTGCTTaGCCCAAGGCTCCTGCTGTGATTTCAAAGAGGATT | + |
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Preference number: 6 (lower is better) Translates to: GSGRASVTLLGA*PKAPAVISKRI Trigger: AATCCTCTTTGAAATCACAGCAGGAGCCTTGGGCAAAGCACCCAGTAAAGTAACCGATGCCCTTCCTGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059462.12 ENSMUST00000065364.5 |
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| CDS GCA 72 bp | TTGGTTCTTCATGCCCATGAGCACAGAGTTCATGTGTaGTTTGGAGGCATAGAGCTTGCTCACGGCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LVLHAHEHRVHV*FGGIELAHGFP Trigger: AGGAAAGCCGTGAGCAAGCTCTATGCCTCCAAAGCACACATGAACTCTGTGCTCATGGGCATGAAGAACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059462.12 ENSMUST00000065364.5 ENSMUST00000204535.2 |
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| CDS CAA 72 bp | CTGCAGAGAACCAGCTACTCGCAGGACCGCTCTTATTaGCCTGTCAACAACTCTCATTTCCTTTCTGATCTT | + |
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Preference number: 6 (lower is better) Translates to: LQRTSYSQDRSY*PVNNSHFLSDL Trigger: AAGATCAGAAAGGAAATGAGAGTTGTTGACAGGCAAATAAGAGCGGTCCTGCGAGTAGCTGGTTCTCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204199.2 |
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