Pregenerated sensors for CHMP2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033916Ensembl transcript IDs: ENSMUST00000005711.6, ENSMUST00000210587.2, ENSMUST00000211344.2, ENSMUST00000211369.2, ENSMUST00000211626.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCAGTCCCTGCGAAGGTTCTTGAGCCTCTCTTCCAGGTCTGCATCAGCATCAGCCACCAGCTGCCACACTaGGTGAGCCTCCAGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SVPAKVLEPLFQVCISISHQLPH*VSLQWR Trigger: CCTCCACTGGAGGCTCACTCAGTGTGGCAGCTGGTG...GCTGATGCTGATGCAGACCTGGAAGAGAGGCTCAAGAACCTTCGCAGGGACTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211369.2 |
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| 3UTR TCA 72 bp | AGCCTCCAGTGGAGGGAAGGTTTGACAGCTCATCTGTaGGGCTCAGTCCCAGCTCATCCAGGACCTGGGACA | + |
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Preference number: 3 (lower is better) Translates to: SLQWREGLTAHL*GSVPAHPGPGT Trigger: TGTCCCAGGTCCTGGATGAGCTGGGACTGAGCCTCACAGATGAGCTGTCAAACCTTCCCTCCACTGGAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211369.2 |
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| CDS-3UTR CCA 90 bp | GCCTCTGCTTTCTTCCCACCAGCTGCCACACTGAGTGAGCCTCCAGTGGAGGGATGTCCAGTTCTCTCATaGCTCGGTTCAGGGCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: ASAFFPPAATLSEPPVEGCPVLS*LGSGPS Trigger: AGAGGGCCCTGAACCGAGCCATGAGAGAACTGGACA...TCCCTCCACTGGAGGCTCACTCAGTGTGGCAGCTGGTGGGAAGAAAGCAGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211369.2 |
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| CDS-3UTR GCA 90 bp | TCCCTGCGAAGGTTCTTGAGCCTCTCTTCCAGGTCTGCATCAGCATCAGCCAGGAGGGCCCTCTGGTTTTaGCGAAGTAGTTCCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SLRRFLSLSSRSASASARRALWF*RSSSSG Trigger: GCCAGAGGAACTACTTCGGCAAAACCAGAGGGCCCT...CCTGGCTGATGCTGATGCAGACCTGGAAGAGAGGCTCAAGAACCTTCGCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211369.2 |
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| CDS-3UTR CCA 90 bp | TTCTTCCCACCAGCTGCCACACTGAGTGAGCCTCCAGTGGAGGGAAGGTTTGACCGGTTCAGGGCCCTCTaGTTTTGCCGAAGTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFPPAATLSEPPVEGRFDRFRAL*FCRSSS Trigger: GGAACTACTTCGGCAAAACCAGAGGGCCCTGAACCG...GTCAAACCTTCCCTCCACTGGAGGCTCACTCAGTGTGGCAGCTGGTGGGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211369.2 |
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| CDS-3UTR TCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGCACCAGCTGCCACACTaGGTGAGCCTCCAGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWHQLPH*VSLQWR Trigger: CCTCCACTGGAGGCTCACTCAGTGTGGCAGCTGGTG...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR TCA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGCACCAGCTGCCACACTaGGTGAGCCTCCAGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KLVSKFLYYRGTGCTELGHQLPH*VSLQWR Trigger: CCTCCACTGGAGGCTCACTCAGTGTGGCAGCTGGTG...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
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| CDS-3UTR GCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGCCTCTCTTCCAGGTCTaGATCAGCATCAGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWPLFQV*ISISQG Trigger: GCCCTGGCTGATGCTGATGCAGACCTGGAAGAGAGG...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR GCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGAGGGCCCTCTGGTTTTaGCGAAGTAGTTCCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWRALWF*RSSSSG Trigger: GCCAGAGGAACTACTTCGGCAAAACCAGAGGGCCCT...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGCGGTTCAGGGCCCTCTaGTTTTGCCGAAGTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWRFRAL*FCRSSS Trigger: GGAACTACTTCGGCAAAACCAGAGGGCCCTGAACCG...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGTGTCCAGTTCTCTCATaGCTCGGTTCAGGGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWCPVLS*LGSGPS Trigger: AGAGGGCCCTGAACCGAGCCATGAGAGAACTGGACA...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR TCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGTTGACAGCTCATCTGTaGGGCTCAGTCCCAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWLTAHL*GSVPAH Trigger: ATGAGCTGGGACTGAGCCTCACAGATGAGCTGTCAA...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR TCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGAGTGGAGGGAAGGTTTaGCAGCTCATCTGTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWSGGKV*QLICEA Trigger: AGCCTCACAGATGAGCTGTCAAACCTTCCCTCCACT...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR GCA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGCCTCTCTTCCAGGTCTaGATCAGCATCAGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLVSKFLYYRGTGCTELGPLFQV*ISISQG Trigger: GCCCTGGCTGATGCTGATGCAGACCTGGAAGAGAGG...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
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| CDS-3UTR CCA 90 bp | CCACCAGCTGCCACACTGAGTGAGCCTCCAGTGGAGGGAAGGTTTGACAGCTCAATGATTTTCTTTTCCTaGGTTTCTAGTTTCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PPAATLSEPPVEGRFDSSMIFFS*VSSFCR Trigger: ACGACAGAAACTAGAAACCCAGGAAAAGAAAATCAT...TGAGCTGTCAAACCTTCCCTCCACTGGAGGCTCACTCAGTGTGGCAGCTGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211369.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGTTGAGGGACACAGCTTaGATGTTGGCCCGCATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWLRDTA*MLARIN Trigger: GTTGATGCGGGCCAACATCCAAGCTGTGTCCCTCAA...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGAGCTCATCCAGGACCTaGGACACAACAGCATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWSSSRT*DTTASL Trigger: GAGTGATGCTGTTGTGTCCCAGGTCCTGGATGAGCT...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR TCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGCTTCCTTCATGTCCATaGTCTCTGCCTGCCGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWLPSCP*SLPAVQ Trigger: TTGAACGGCAGGCAGAGATCATGGACATGAAGGAAG...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR GCA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGAGGGCCCTCTGGTTTTaGCGAAGTAGTTCCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLVSKFLYYRGTGCTELGRALWF*RSSSSG Trigger: GCCAGAGGAACTACTTCGGCAAAACCAGAGGGCCCT...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
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| CDS-3UTR CCA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGCGGTTCAGGGCCCTCTaGTTTTGCCGAAGTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLVSKFLYYRGTGCTELGRFRAL*FCRSSS Trigger: GGAACTACTTCGGCAAAACCAGAGGGCCCTGAACCG...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
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| CDS-3UTR TCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGCCAGGTCTTTTGCCATaGTTCGAACAGCATCCATCT | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWPGLLP*FEQHPS Trigger: AGATGGATGCTGTTCGAATCATGGCAAAAGACCTGG...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
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| CDS-3UTR TCA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGAGTGGAGGGAAGGTTTaGCAGCTCATCTGTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KLVSKFLYYRGTGCTELGSGGKV*QLICEA Trigger: AGCCTCACAGATGAGCTGTCAAACCTTCCCTCCACT...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
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| CDS-3UTR GCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGACGCACCAGGTCTTTTaGCATGATTCGAACAGCATC | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWTHQVF*HDSNSI Trigger: GATGCTGTTCGAATCATGGCAAAAGACCTGGTGCGT...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
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| CDS-3UTR GCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGTCCATGATCTCTGCCTaGCGTTCAAACTCCATCATG | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWSMISA*RSNSIM Trigger: CATGATGGAGTTTGAACGGCAGGCAGAGATCATGGA...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR GCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGCATGTCCATGATCTCTaGCTGCCGTTCAAACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWHVHDL*LPFKLH Trigger: ATGGAGTTTGAACGGCAGGCAGAGATCATGGACATG...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGCGAACAGCATCCATCTaGCCTTGCTTTGCCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWRTASI*PCFAIF Trigger: AAAGATGGCAAAGCAAGGCCAGATGGATGCTGTTCG...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
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| CDS-3UTR CCA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTTGAGGGACACAGCTTaGATGTTGGCCCGCATCAAC | + |
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Preference number: 4 (lower is better) Translates to: KLVSKFLYYRGTGCTELGLRDTA*MLARIN Trigger: GTTGATGCGGGCCAACATCCAAGCTGTGTCCCTCAA...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
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| CDS-3UTR TCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGTTAGAGTCTGTATCTTaGGGGACACAGCTTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWLESVS*GTQLGC Trigger: ACATCCAAGCTGTGTCCCTCAAGATACAGACTCTAA...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
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| CDS-3UTR TCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGGTTCAAACTCCATCATaGTCTTCTGGATCTGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWVQTPS*SSGSGV Trigger: TACCCCAGATCCAGAAGATCATGATGGAGTTTGAAC...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR TCA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGCTTCCTTCATGTCCATaGTCTCTGCCTGCCGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: KLVSKFLYYRGTGCTELGLPSCP*SLPAVQ Trigger: TTGAACGGCAGGCAGAGATCATGGACATGAAGGAAG...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
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| CDS-3UTR GCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGGCATCCATCTGGCCTTaGTTTGCCATCTTTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWASIWP*FAIFLM Trigger: CATCAAAAAGATGGCAAAGCAAGGCCAGATGGATGC...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGCTTCCTCATCACCCATaGCATCATCAATTGCGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWLPHHP*HHQLRH Trigger: ATGACGCAATTGATGATGCCATGGGTGATGAGGAAG...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR TCA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGCCAGGTCTTTTGCCATaGTTCGAACAGCATCCATCT | + |
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Preference number: 4 (lower is better) Translates to: KLVSKFLYYRGTGCTELGPGLLP*FEQHPS Trigger: AGATGGATGCTGTTCGAATCATGGCAAAAGACCTGG...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
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| CDS-3UTR GCA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGCATGTCCATGATCTCTaGCTGCCGTTCAAACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: KLVSKFLYYRGTGCTELGHVHDL*LPFKLH Trigger: ATGGAGTTTGAACGGCAGGCAGAGATCATGGACATG...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
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| CDS-3UTR GCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGTTCAGCATCTGGCCTTaGTTTGCCATCTTTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWFSIWP*FAIFLM Trigger: CATCAAAAAGATGGCAAAGCAAGGCCAGATGCTGAA...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000211344.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGATGATCTTCTGGATCTaGGGTAATTTCAGCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWMIFWI*GNFSCL Trigger: CAGACAGCTGAAATTACCCCAGATCCAGAAGATCAT...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGTCCATCATGATCTTCTaGATCTGGGGTAATTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWSIMIF*IWGNFS Trigger: GCTGAAATTACCCCAGATCCAGAAGATCATGATGGA...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGATGATCTTCTGGATCTaGGGTAATTTCAGCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWMIFWI*GNFSIW Trigger: CCAGATGCTGAAATTACCCCAGATCCAGAAGATCAT...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211344.2 |
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| CDS-3UTR TCA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTTAGAGTCTGTATCTTaGGGGACACAGCTTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: KLVSKFLYYRGTGCTELGLESVS*GTQLGC Trigger: ACATCCAAGCTGTGTCCCTCAAGATACAGACTCTAA...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
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| CDS-3UTR GCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGCATGGCATCATCAATTaGGTCATTCATCATTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWHGIIN*VIHHFF Trigger: GAAGAAATGATGAATGACGCAATTGATGATGCCATG...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGGTGCCATTGAGTTGTTaGATTTTAGAGTCTGTATCT | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWVPLSC*ILESVS Trigger: AGATACAGACTCTAAAATCCAACAACTCAATGGCAC...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGATGATTTTCTTTTCCTaGGTTTCTAGTTTCTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: LVSKFLYYRGTGCTELGWMIFFS*VSSFCR Trigger: ACGACAGAAACTAGAAACCCAGGAAAAGAAAATCAT...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
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| CDS-3UTR GCA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGCATGGCATCATCAATTaGGTCATTCATCATTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KLVSKFLYYRGTGCTELGHGIIN*VIHHFF Trigger: GAAGAAATGATGAATGACGCAATTGATGATGCCATG...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
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| CDS-3UTR CCA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGGTGCCATTGAGTTGTTaGATTTTAGAGTCTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: KLVSKFLYYRGTGCTELGVPLSC*ILESVS Trigger: AGATACAGACTCTAAAATCCAACAACTCAATGGCAC...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
||
| CDS-3UTR CCA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGATGATTTTCTTTTCCTaGGTTTCTAGTTTCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KLVSKFLYYRGTGCTELGMIFFS*VSSFCR Trigger: ACGACAGAAACTAGAAACCCAGGAAAAGAAAATCAT...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
||
| CDS GCA 90 bp | TCCCTGTCCAGTTCTCTCATGGCTCGGTTCAGGGCCCTCTGGTTTTaGCGAAGTAGTTCCTCTGGCGTCTTCCGGCGCCCAAACAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSSLMARFRALWF*RSSSSGVFRRPNNR Trigger: CCTGTTGTTTGGGCGCCGGAAGACGCCAGAGGAACTACTTCGGCAAAACCAGAGGGCCCTGAACCGAGCCATGAGAGAACTGGACAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 ENSMUST00000211369.2 ENSMUST00000211626.2 |
||
| CDS CCA 90 bp | TGTCGTTCCCTGTCCAGTTCTCTCATGGCTCGGTTCAGGGCCCTCTaGTTTTGCCGAAGTAGTTCCTCTGGCGTCTTCCGGCGCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CRSLSSSLMARFRAL*FCRSSSSGVFRRPN Trigger: GTTTGGGCGCCGGAAGACGCCAGAGGAACTACTTCGGCAAAACCAGAGGGCCCTGAACCGAGCCATGAGAGAACTGGACAGGGAACGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 ENSMUST00000211369.2 ENSMUST00000211626.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCTGCGAAGGTTCTTGAGCCTCTCTTCCAGGTCTGCATCAGCATCAGCCAGTGCTTTGCCATCTTTTaGATGTCCGCAATGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VPAKVLEPLFQVCISISQCFAIF*MSAMIF Trigger: GAAAATCATTGCGGACATCAAAAAGATGGCAAAGCA...CTGGCTGATGCTGATGCAGACCTGGAAGAGAGGCTCAAGAACCTTCGCAGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211369.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGCTTGAGGGACACAGCTaGGATGTTGGCCCGCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: LVSKFLYYRGTGCTELGWLEGHS*DVGPHQ Trigger: TTGATGCGGGCCAACATCCAAGCTGTGTCCCTCAAG...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGTCCCTGCGAAGGTTCTaGAGCCTCTCTTCCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVSKFLYYRGTGCTELGWSLRRF*SLSSRS Trigger: AGACCTGGAAGAGAGGCTCAAGAACCTTCGCAGGGA...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
||
| CDS GCA 90 bp | CAACACAAACTTGCGTACATATCTCCGGGTACGCACCAGGTCTTTTaGCATGATTCGAACAGCATCCATCTGGCCTTGCTTTGCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: QHKLAYISPGTHQVF*HDSNSIHLALLCHL Trigger: AAGATGGCAAAGCAAGGCCAGATGGATGCTGTTCGAATCATGGCAAAAGACCTGGTGCGTACCCGGAGATATGTACGCAAGTTTGTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGGACACAGCTTGGATGTaGGCCCGCATCAACACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LVSKFLYYRGTGCTELGWDTAWM*ARINTN Trigger: GTTTGTGTTGATGCGGGCCAACATCCAAGCTGTGTC...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS-3UTR CAA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGGACACAGCTTGGATGTaGGCCCGCATCAACACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KLVSKFLYYRGTGCTELGDTAWM*ARINTN Trigger: GTTTGTGTTGATGCGGGCCAACATCCAAGCTGTGTC...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
||
| CDS CCA 90 bp | ATTGAGTTGTTGGATTTTAGAGTCTGTATCTTGAGGGACACAGCTTaGATGTTGGCCCGCATCAACACAAACTTGCGTACATATCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: IELLDFRVCILRDTA*MLARINTNLRTYLR Trigger: CCGGAGATATGTACGCAAGTTTGTGTTGATGCGGGCCAACATCCAAGCTGTGTCCCTCAAGATACAGACTCTAAAATCCAACAACTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CCA 90 bp | ATGTCCATGATCTCTGCCTGCCGTTCAAACTCCATCATGATCTTCTaGATCTGGGGTAATTTCAGCAGGTCTTTTGCCATGATTCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: MSMISACRSNSIMIF*IWGNFSRSFAMIRT Trigger: TGTTCGAATCATGGCAAAAGACCTGCTGAAATTACCCCAGATCCAGAAGATCATGATGGAGTTTGAACGGCAGGCAGAGATCATGGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211626.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGAGCATCCATCTGGCCTaGCTTTGCCATCTTTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LVSKFLYYRGTGCTELGWSIHLA*LCHLFD Trigger: ATCAAAAAGATGGCAAAGCAAGGCCAGATGGATGCT...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGTTTAGAGTCTGTATCTaGAGGGACACAGCTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LVSKFLYYRGTGCTELGWFRVCI*RDTAWM Trigger: CATCCAAGCTGTGTCCCTCAAGATACAGACTCTAAA...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGGCTTGTGCCATTGAGTaGTTGGATTTTAGAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVSKFLYYRGTGCTELGWACAIE*LDFRVC Trigger: ACAGACTCTAAAATCCAACAACTCAATGGCACAAGC...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGTGCTTTGCCATCTTTTaGATGTCCGCAATGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVSKFLYYRGTGCTELGWCFAIF*MSAMIF Trigger: GAAAATCATTGCGGACATCAAAAAGATGGCAAAGCA...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 |
||
| CDS-3UTR CAA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGAGCATCCATCTGGCCTaGCTTTGCCATCTTTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KLVSKFLYYRGTGCTELGSIHLA*LCHLFD Trigger: ATCAAAAAGATGGCAAAGCAAGGCCAGATGGATGCT...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
||
| CDS-3UTR CAA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTTTAGAGTCTGTATCTaGAGGGACACAGCTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: KLVSKFLYYRGTGCTELGFRVCI*RDTAWM Trigger: CATCCAAGCTGTGTCCCTCAAGATACAGACTCTAAA...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGGTGTGCCATTGAGTTGTaGGATTTTAGAGTCTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: LVSKFLYYRGTGCTELGWCAIEL*DFRVCI Trigger: GATACAGACTCTAAAATCCAACAACTCAATGGCACA...CCACCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS-3UTR CAA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGGCTTGTGCCATTGAGTaGTTGGATTTTAGAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KLVSKFLYYRGTGCTELGACAIE*LDFRVC Trigger: ACAGACTCTAAAATCCAACAACTCAATGGCACAAGC...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
||
| CDS-3UTR CAA 90 bp | AAATTAGTGTCCAAATTTCTTTATTACAGGGGGACAGGATGCACTGAGTTGGGGTGCTTTGCCATCTTTTaGATGTCCGCAATGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLVSKFLYYRGTGCTELGCFAIF*MSAMIF Trigger: GAAAATCATTGCGGACATCAAAAAGATGGCAAAGCA...CCCCAACTCAGTGCATCCTGTCCCCCTGTAATAAAGAAATTTGGACACTAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000210587.2 |
||
| CDS GCA 72 bp | AGTTCTCTCATGGCTCGGTTCAGGGCCCTCTGGTTTTaGCGAAGTAGTTCCTCTGGCGTCTTCCGGCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLMARFRALWF*RSSSSGVFRRP Trigger: TGGGCGCCGGAAGACGCCAGAGGAACTACTTCGGCAAAACCAGAGGGCCCTGAACCGAGCCATGAGAGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 ENSMUST00000211369.2 ENSMUST00000211626.2 |
||
| CDS CCA 72 bp | CTGTCCAGTTCTCTCATGGCTCGGTTCAGGGCCCTCTaGTTTTGCCGAAGTAGTTCCTCTGGCGTCTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LSSSLMARFRAL*FCRSSSSGVFR Trigger: CCGGAAGACGCCAGAGGAACTACTTCGGCAAAACCAGAGGGCCCTGAACCGAGCCATGAGAGAACTGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 ENSMUST00000211344.2 ENSMUST00000211369.2 ENSMUST00000211626.2 |
||
| CDS TCA 72 bp | GTACATATCTCCGGGTACGCACCAGGTCTTTTGCCATaGTTCGAACAGCATCCATCTGGCCTTGCTTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VHISGYAPGLLP*FEQHPSGLALP Trigger: TGGCAAAGCAAGGCCAGATGGATGCTGTTCGAATCATGGCAAAAGACCTGGTGCGTACCCGGAGATATGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS GCA 72 bp | CTTGCGTACATATCTCCGGGTACGCACCAGGTCTTTTaGCATGATTCGAACAGCATCCATCTGGCCTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LAYISPGTHQVF*HDSNSIHLALL Trigger: AAGCAAGGCCAGATGGATGCTGTTCGAATCATGGCAAAAGACCTGGTGCGTACCCGGAGATATGTACGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS GCA 72 bp | ACACAGCTTGGATGTTGGCCCGCATCAACACAAACTTaGGTACATATCTCCGGGTACGCACCAGGTCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TQLGCWPASTQT*VHISGYAPGLL Trigger: CAAAAGACCTGGTGCGTACCCGGAGATATGTACGCAAGTTTGTGTTGATGCGGGCCAACATCCAAGCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CAA 72 bp | GACACAGCTTGGATGTTGGCCCGCATCAACACAAACTaGCGTACATATCTCCGGGTACGCACCAGGTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: DTAWMLARINTN*RTYLRVRTRSF Trigger: AAAAGACCTGGTGCGTACCCGGAGATATGTACGCAAGTTTGTGTTGATGCGGGCCAACATCCAAGCTGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CAA 90 bp | ATCTTGAGGGACACAGCTTGGATGTTGGCCCGCATCAACACAAACTaGCGTACATATCTCCGGGTACGCACCAGGTCTTTTGCCATGATT | + |
|
Preference number: 6 (lower is better) Translates to: ILRDTAWMLARINTN*RTYLRVRTRSFAMI Trigger: AATCATGGCAAAAGACCTGGTGCGTACCCGGAGATATGTACGCAAGTTTGTGTTGATGCGGGCCAACATCCAAGCTGTGTCCCTCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CCA 72 bp | GCCTGCCGTTCAAACTCCATCATGATCTTCTGGATCTaGGGTAATTTCAGCATCTGGCCTTGCTTTGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: ACRSNSIMIFWI*GNFSIWPCFAI Trigger: GATGGCAAAGCAAGGCCAGATGCTGAAATTACCCCAGATCCAGAAGATCATGATGGAGTTTGAACGGCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211344.2 |
||
| CDS TCA 72 bp | TCTGGATCTGGGGTAATTTCAGCAGGTCTTTTGCCATaGTTCGAACAGCATCCATCTGGCCTTGCTTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGSGVISAGLLP*FEQHPSGLALP Trigger: TGGCAAAGCAAGGCCAGATGGATGCTGTTCGAATCATGGCAAAAGACCTGCTGAAATTACCCCAGATCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211626.2 |
||
| CDS CCA 72 bp | GCCTGCCGTTCAAACTCCATCATGATCTTCTGGATCTaGGGTAATTTCAGCTGTCTGTTCATAGTGCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ACRSNSIMIFWI*GNFSCLFIVPM Trigger: CATGGGCACTATGAACAGACAGCTGAAATTACCCCAGATCCAGAAGATCATGATGGAGTTTGAACGGCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CAA 90 bp | TTGTTGGATTTTAGAGTCTGTATCTTGAGGGACACAGCTTGGATGTaGGCCCGCATCAACACAAACTTGCGTACATATCTCCGGGTACGC | + |
|
Preference number: 6 (lower is better) Translates to: LLDFRVCILRDTAWM*ARINTNLRTYLRVR Trigger: GCGTACCCGGAGATATGTACGCAAGTTTGTGTTGATGCGGGCCAACATCCAAGCTGTGTCCCTCAAGATACAGACTCTAAAATCCAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CAA 90 bp | GTGCCCATGGCCTTAGTAACACCCTTCATGGCTTGTGCCATTGAGTaGTTGGATTTTAGAGTCTGTATCTTGAGGGACACAGCTTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: VPMALVTPFMACAIE*LDFRVCILRDTAWM Trigger: CATCCAAGCTGTGTCCCTCAAGATACAGACTCTAAAATCCAACAACTCAATGGCACAAGCCATGAAGGGTGTTACTAAGGCCATGGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CAA 90 bp | CCCATGGCCTTAGTAACACCCTTCATGGCTTGTGCCATTGAGTTGTaGGATTTTAGAGTCTGTATCTTGAGGGACACAGCTTGGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PMALVTPFMACAIEL*DFRVCILRDTAWML Trigger: CAACATCCAAGCTGTGTCCCTCAAGATACAGACTCTAAAATCCAACAACTCAATGGCACAAGCCATGAAGGGTGTTACTAAGGCCATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CCA 72 bp | ACCAGGTCTTTTGCCATGATTCGAACAGCATCCATCTaGCCTTGCTTTGCCATCTTTTTGATGTCCGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: TRSFAMIRTASI*PCFAIFLMSAM Trigger: CATTGCGGACATCAAAAAGATGGCAAAGCAAGGCCAGATGGATGCTGTTCGAATCATGGCAAAAGACCTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CCA 72 bp | ATCTCTGCCTGCCGTTCAAACTCCATCATGATCTTCTaGATCTGGGGTAATTTCAGCATCTGGCCTTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ISACRSNSIMIF*IWGNFSIWPCF Trigger: AAAGCAAGGCCAGATGCTGAAATTACCCCAGATCCAGAAGATCATGATGGAGTTTGAACGGCAGGCAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211344.2 |
||
| CDS CCA 72 bp | AGCAGGTCTTTTGCCATGATTCGAACAGCATCCATCTaGCCTTGCTTTGCCATCTTTTTGATGTCCGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SRSFAMIRTASI*PCFAIFLMSAM Trigger: CATTGCGGACATCAAAAAGATGGCAAAGCAAGGCCAGATGGATGCTGTTCGAATCATGGCAAAAGACCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211626.2 |
||
| CDS CCA 72 bp | ATCTCTGCCTGCCGTTCAAACTCCATCATGATCTTCTaGATCTGGGGTAATTTCAGCAGGTCTTTTGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ISACRSNSIMIF*IWGNFSRSFAM Trigger: CATGGCAAAAGACCTGCTGAAATTACCCCAGATCCAGAAGATCATGATGGAGTTTGAACGGCAGGCAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211626.2 |
||
| CDS CAA 72 bp | TGTGCCATTGAGTTGTTGGATTTTAGAGTCTGTATCTaGAGGGACACAGCTTGGATGTTGGCCCGCATCAAC | + |
|
Preference number: 6 (lower is better) Translates to: CAIELLDFRVCI*RDTAWMLARIN Trigger: GTTGATGCGGGCCAACATCCAAGCTGTGTCCCTCAAGATACAGACTCTAAAATCCAACAACTCAATGGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CAA 90 bp | TTCATGGCTTGTGCCATTGAGTTGTTGGATTTTAGAGTCTGTATCTaGAGGGACACAGCTTGGATGTTGGCCCGCATCAACACAAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: FMACAIELLDFRVCI*RDTAWMLARINTNL Trigger: CAAGTTTGTGTTGATGCGGGCCAACATCCAAGCTGTGTCCCTCAAGATACAGACTCTAAAATCCAACAACTCAATGGCACAAGCCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CCA 72 bp | TTGGATTTTAGAGTCTGTATCTTGAGGGACACAGCTTaGATGTTGGCCCGCATCAACACAAACTTGCGTACA | + |
|
Preference number: 6 (lower is better) Translates to: LDFRVCILRDTA*MLARINTNLRT Trigger: TGTACGCAAGTTTGTGTTGATGCGGGCCAACATCCAAGCTGTGTCCCTCAAGATACAGACTCTAAAATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CCA 72 bp | ATCTCTGCCTGCCGTTCAAACTCCATCATGATCTTCTaGATCTGGGGTAATTTCAGCTGTCTGTTCATAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ISACRSNSIMIF*IWGNFSCLFIV Trigger: CACTATGAACAGACAGCTGAAATTACCCCAGATCCAGAAGATCATGATGGAGTTTGAACGGCAGGCAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CAA 72 bp | TTTAGAGTCTGTATCTTGAGGGACACAGCTTGGATGTaGGCCCGCATCAACACAAACTTGCGTACATATCTC | + |
|
Preference number: 6 (lower is better) Translates to: FRVCILRDTAWM*ARINTNLRTYL Trigger: GAGATATGTACGCAAGTTTGTGTTGATGCGGGCCAACATCCAAGCTGTGTCCCTCAAGATACAGACTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||
| CDS CAA 72 bp | GCCTTAGTAACACCCTTCATGGCTTGTGCCATTGAGTaGTTGGATTTTAGAGTCTGTATCTTGAGGGACACA | + |
|
Preference number: 6 (lower is better) Translates to: ALVTPFMACAIE*LDFRVCILRDT Trigger: TGTGTCCCTCAAGATACAGACTCTAAAATCCAACAACTCAATGGCACAAGCCATGAAGGGTGTTACTAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005711.6 ENSMUST00000210587.2 |
||