Pregenerated sensors for CHMP1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000743Ensembl transcript IDs: ENSMUST00000000759.9
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGCGATGGTTCTCACCCTCCCTGGCCGCAGCACAGAGCGGGTGTaGAGTCGCTGGAGTCTCAAGGCCCCAAAGCACTGGGCTCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: GAMVLTLPGRSTERV*SRWSLKAPKHWAQV Trigger: GACTTGAGCCCAGTGCTTTGGGGCCTTGAGACTCCAGCGACTGCACACCCGCTCTGTGCTGCGGCCAGGGAGGGTGAGAACCATCGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR TCA 90 bp | CTCCAGGTCTACCTGCTCGCTGCCAGCTTCCTCACTGTGGAGGGATaGAGAGCTTGCTGCCAGCTGCCAGATGTGACTGACTCAGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: LQVYLLAASFLTVEG*RACCQLPDVTDSGS Trigger: GGAGCCTGAGTCAGTCACATCTGGCAGCTGGCAGCAAGCTCTTCATCCCTCCACAGTGAGGAAGCTGGCAGCGAGCAGGTAGACCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR TCA 90 bp | TCCTCACTGTGGAGGGATGAAGAGCTTGCTGCCAGCTGCCAGATGTaGCTGACTCAGGCTCCCTCTGTTAGCCAGCCAGGCTCTCCCTTG | + |
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Preference number: 1 (lower is better) Translates to: SSLWRDEELAASCQM*LTQAPSVSQPGSPL Trigger: CAAGGGAGAGCCTGGCTGGCTAACAGAGGGAGCCTGAGTCAGTCACATCTGGCAGCTGGCAGCAAGCTCTTCATCCCTCCACAGTGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CCA 90 bp | GGCAGGGGAGCCAGTCATTCAGGAATGAGCAGCTCTAAGGCGGCCTaGGAGCTGACACTAGGAGTCTGTCAGCATCAAGCAGACAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: GRGASHSGMSSSKAA*ELTLGVCQHQADSS Trigger: TGAGCTGTCTGCTTGATGCTGACAGACTCCTAGTGTCAGCTCCCAGGCCGCCTTAGAGCTGCTCATTCCTGAATGACTGGCTCCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CCA 90 bp | CCATTTGTAAAGGCCCCAGGTCAGTGTTGGTGGCACTGGACACCTTaGTACACAAAGTCCACAGGAACCTTAAGGGCTGTCACACACTGG | + |
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Preference number: 1 (lower is better) Translates to: PFVKAPGQCWWHWTP*YTKSTGTLRAVTHW Trigger: CCAGTGTGTGACAGCCCTTAAGGTTCCTGTGGACTTTGTGTACCAAGGTGTCCAGTGCCACCAACACTGACCTGGGGCCTTTACAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR TCA 90 bp | AGCTGCAGAGTAAGGTGGAAGAATCTCTTAGGAAGGAGCTGGACTTaGAAGTGGATGGTACTTCTGTCCCTGTGGGCTGGGAAAGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: SCRVRWKNLLGRSWT*KWMVLLSLWAGKGS Trigger: GCTCCCTTTCCCAGCCCACAGGGACAGAAGTACCATCCACTTTCAAGTCCAGCTCCTTCCTAAGAGATTCTTCCACCTTACTCTGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR GCA 90 bp | GCTCAGCCTACAGAGAGGGCTGGGACAAACACAACCCGTCCACTGTaGTTTCTACGTTGGCAAAAGAACAAAGTCACCAGGAGTTTTAAG | + |
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Preference number: 1 (lower is better) Translates to: AQPTERAGTNTTRPL*FLRWQKNKVTRSFK Trigger: CTTAAAACTCCTGGTGACTTTGTTCTTTTGCCAACGTAGAAAGCACAGTGGACGGGTTGTGTTTGTCCCAGCCCTCTCTGTAGGCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CCA 90 bp | GAGAGGGCTGGGACAAACACAACCCGTCCACTGTGCTTTCTACGTTaGCAAAAGAACAAAGTCACCAGGAGTTTTAAGAACATGAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: ERAGTNTTRPLCFLR*QKNKVTRSFKNMSK Trigger: TTTACTCATGTTCTTAAAACTCCTGGTGACTTTGTTCTTTTGCCAACGTAGAAAGCACAGTGGACGGGTTGTGTTTGTCCCAGCCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR GCA 90 bp | CCTATAACATCAACTTGTAATGTGGAATACCCAGGGACTCCAAAGTaGAGAACAGAAGAAACCAAACCAAACTTGTGTGTAAACCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: PITSTCNVEYPGTPK*RTEETKPNLCVNLW Trigger: CCACAGGTTTACACACAAGTTTGGTTTGGTTTCTTCTGTTCTGCACTTTGGAGTCCCTGGGTATTCCACATTACAAGTTGATGTTATAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGCTCCCCATCCCTACTACTGTTCCACAAACCCTGCACCCTCCAGGACCCGCCCCAGGTCAGTGTTaGTGGCACTGGACACCTTGG | + |
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Preference number: 2 (lower is better) Translates to: AQLPIPTTVPQTLHPPGPAPGQC*WHWTPW Trigger: CCAAGGTGTCCAGTGCCACCAACACTGACCTGGGGC...GGGTCCTGGAGGGTGCAGGGTTTGTGGAACAGTAGTAGGGATGGGGAGCTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGTAAACCTGTGGGCGCCGCTGCACTGCTCAGCCTACAGAGAGGGCTGGGACCTCACTGTGGAGGGATaGAGAGCTTGCTGCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: CVNLWAPLHCSAYREGWDLTVEG*RACCQL Trigger: CAGCTGGCAGCAAGCTCTTCATCCCTCCACAGTGAG...GTCCCAGCCCTCTCTGTAGGCTGAGCAGTGCAGCGGCGCCCACAGGTTTACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR TCA 90 bp | GGCGGCCTGGGAGCTGACACTAGGAGTCTGTCAGCATCAAGCAGACAGCTCAGCTCTAAGGCGCCAGCCTaGCAGGTTGGAAAAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: GGLGADTRSLSASSRQLSSKAPA*QVGKEP Trigger: GGGCTCTTTTCCAACCTGTCAGGCTGGCGCCTTAGA...GCTGAGCTGTCTGCTTGATGCTGACAGACTCCTAGTGTCAGCTCCCAGGCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGCTCCCCATCCCTACTACTGTTCCACAAACCCTGCACCCTCCAGGACCCGCAGCCCTGGGAAGATaGAGGAGAGCAACCATTTGT | + |
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Preference number: 2 (lower is better) Translates to: AQLPIPTTVPQTLHPPGPAALGR*RRATIC Trigger: ACAAATGGTTGCTCTCCTCCATCTTCCCAGGGCTGC...GGGTCCTGGAGGGTGCAGGGTTTGTGGAACAGTAGTAGGGATGGGGAGCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAACAGAAGAAACCAAACCAAACTTGTGTGTAAACCTGTGGGCGCCGCTGCACCAGGACCGCAGCCCTaGGAAGATGGAGGAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: QNRRNQTKLVCKPVGAAAPGPQP*EDGGEQ Trigger: TTGCTCTCCTCCATCTTCCCAGGGCTGCGGTCCTGG...TGCAGCGGCGCCCACAGGTTTACACACAAGTTTGGTTTGGTTTCTTCTGTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAACCAAACCAAACTTGTGTGTAAACCTGTGGGCGCCGCTGCACTGCTCAGCAAGGGTTGGAGAAAGTaGAGCAGTTGGGCAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: RNQTKLVCKPVGAAALLSKGWRK*SSWAEA Trigger: GGCTTCTGCCCAACTGCTTCACTTTCTCCAACCCTT...GCTGAGCAGTGCAGCGGCGCCCACAGGTTTACACACAAGTTTGGTTTGGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAACCAAACCAAACTTGTGTGTAAACCTGTGGGCGCCGCTGCACTGCTCAGCTCCCTTGGAGAAGGCTaGAAGCAGCAGCCTTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RNQTKLVCKPVGAAALLSSLGEG*KQQPLS Trigger: AGACAAAGGCTGCTGCTTTCAGCCTTCTCCAAGGGA...GCTGAGCAGTGCAGCGGCGCCCACAGGTTTACACACAAGTTTGGTTTGGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CCA 90 bp | GTTAGCCAGCCAGGCTCTCCCTTGGAGAAGGCTGAAAGCAGCAGCCTTTGTCTATGGCACTGGACACCTTaGTACACAAAGTCCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: VSQPGSPLEKAESSSLCLWHWTP*YTKSTG Trigger: TCCTGTGGACTTTGTGTACCAAGGTGTCCAGTGCCA...TAGACAAAGGCTGCTGCTTTCAGCCTTCTCCAAGGGAGAGCCTGGCTGGCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR GCA 90 bp | TCCCCACATCCAGGGCAACAATTCCAGCCCCCACCTATAACATCAACTTGTAATGTCTCCAGGTCTACCTaGTCGCTGCCAGCTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SPHPGQQFQPPPITSTCNVSRST*SLPASS Trigger: TGAGGAAGCTGGCAGCGAGCAGGTAGACCTGGAGAC...ATTACAAGTTGATGTTATAGGTGGGGGCTGGAATTGTTGCCCTGGATGTGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR GCA 90 bp | AGAAACCAAACCAAACTTGTGTGTAAACCTGTGGGCGCCGCTGCACTGCTCAGCTCTTCCAGAGGCAGCTaGAGAGTAAGGTGGAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: RNQTKLVCKPVGAAALLSSSRGS*RVRWKN Trigger: ATTCTTCCACCTTACTCTGCAGCTGCCTCTGGAAGA...GCTGAGCAGTGCAGCGGCGCCCACAGGTTTACACACAAGTTTGGTTTGGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CCA 90 bp | TCCCCACATCCAGGGCAACAATTCCAGCCCCCACCTATAACATCAACTTGTAATGCCATCCTCCAGCTGTaGCCCACAAGCACATATGTC | + |
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Preference number: 2 (lower is better) Translates to: SPHPGQQFQPPPITSTCNAILQL*PTSTYV Trigger: GACATATGTGCTTGTGGGCCACAGCTGGAGGATGGC...ATTACAAGTTGATGTTATAGGTGGGGGCTGGAATTGTTGCCCTGGATGTGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CCA 90 bp | AATACCCAGGGACTCCAAAGTGCAGAACAGAAGAAACCAAACCAAACTTGTGTGAGCTGCAGAGTAAGGTaGAAGAATCTCTTAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: NTQGLQSAEQKKPNQTCVSCRVR*KNLLGR Trigger: CCTTCCTAAGAGATTCTTCCACCTTACTCTGCAGCT...CACACAAGTTTGGTTTGGTTTCTTCTGTTCTGCACTTTGGAGTCCCTGGGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR GCA 72 bp | GTTCTCACCCTCCCTGGCCGCAGCACAGAGCGGGTGTaGAGTCGCTGGAGTCTCAAGGCCCCAAAGCACTGG | + |
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Preference number: 3 (lower is better) Translates to: VLTLPGRSTERV*SRWSLKAPKHW Trigger: CCAGTGCTTTGGGGCCTTGAGACTCCAGCGACTGCACACCCGCTCTGTGCTGCGGCCAGGGAGGGTGAGAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CCA 72 bp | GGAGAGGCTCCCAAGAGTTACCTGGCAAAGGAGCGATaGTTCTCACCCTCCCTGGCCGCAGCACAGAGCGGG | + |
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Preference number: 3 (lower is better) Translates to: GEAPKSYLAKER*FSPSLAAAQSG Trigger: CCCGCTCTGTGCTGCGGCCAGGGAGGGTGAGAACCATCGCTCCTTTGCCAGGTAACTCTTGGGAGCCTCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR TCA 72 bp | ATGGTACTTCTGTCCCTGTGGGCTGGGAAAGGGAGCTaGGAGACAGAAAGCCCACGCAGACTCAGCCGGCCG | + |
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Preference number: 3 (lower is better) Translates to: MVLLSLWAGKGS*ETESPRRLSRP Trigger: CGGCCGGCTGAGTCTGCGTGGGCTTTCTGTCTCTCAGCTCCCTTTCCCAGCCCACAGGGACAGAAGTACCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR TCA 72 bp | GGGATGAAGAGCTTGCTGCCAGCTGCCAGATGTGACTaGCTCAGGCTCCCTCTGTTAGCCAGCCAGGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: GMKSLLPAARCD*LRLPLLASQAL Trigger: GAGAGCCTGGCTGGCTAACAGAGGGAGCCTGAGTCAGTCACATCTGGCAGCTGGCAGCAAGCTCTTCATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR TCA 72 bp | TGGAGGGATGAAGAGCTTGCTGCCAGCTGCCAGATGTaGCTGACTCAGGCTCCCTCTGTTAGCCAGCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: WRDEELAASCQM*LTQAPSVSQPG Trigger: GCCTGGCTGGCTAACAGAGGGAGCCTGAGTCAGTCACATCTGGCAGCTGGCAGCAAGCTCTTCATCCCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CCA 72 bp | CCGGCAGTAGACACCAGGACCGCAGCCCTGGGAAGATaGAGGAGAGCAACCATTTGTAAAGGCCCCAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: PAVDTRTAALGR*RRATICKGPRS Trigger: TGACCTGGGGCCTTTACAAATGGTTGCTCTCCTCCATCTTCCCAGGGCTGCGGTCCTGGTGTCTACTGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CCA 72 bp | TCCAGGTCTACCTGCTCGCTGCCAGCTTCCTCACTGTaGAGGGATGAAGAGCTTGCTGCCAGCTGCCAGATG | + |
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Preference number: 3 (lower is better) Translates to: SRSTCSLPASSL*RDEELAASCQM Trigger: CATCTGGCAGCTGGCAGCAAGCTCTTCATCCCTCCACAGTGAGGAAGCTGGCAGCGAGCAGGTAGACCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CAA 90 bp | GCCCAGCTCCCCATCCCTACTACTGTTCCACAAACCCTGCACCCTCCAGGACCCGAGAAAGTGAAGCAGTaGGGCAGAAGCCTCCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: AQLPIPTTVPQTLHPPGPEKVKQ*GRSLQN Trigger: GTTCTGGAGGCTTCTGCCCAACTGCTTCACTTTCTC...GGGTCCTGGAGGGTGCAGGGTTTGTGGAACAGTAGTAGGGATGGGGAGCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CAA 90 bp | ACCATTTGTAAAGGCCCCAGGTCAGTGTTGGTGGCACTGGACACCTTGGTACACCGCCAGCCTGACAGGTaGGAAAAGAGCCCAGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: TICKGPRSVLVALDTLVHRQPDR*EKSPGS Trigger: GCTGCCTGGGCTCTTTTCCAACCTGTCAGGCTGGCG...GTGTACCAAGGTGTCCAGTGCCACCAACACTGACCTGGGGCCTTTACAAATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CAA 90 bp | AACTTGTGTGTAAACCTGTGGGCGCCGCTGCACTGCTCAGCCTACAGAGAGGGCAGGACAACAGAAAGCTaGCCATCCTCCAGCTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: NLCVNLWAPLHCSAYREGRTTES*PSSSCG Trigger: GCCACAGCTGGAGGATGGCAAGCTTTCTGTTGTCCT...GCCCTCTCTGTAGGCTGAGCAGTGCAGCGGCGCCCACAGGTTTACACACAAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR TCA 72 bp | CTGCCCAACCTAAGGCTCAGTTCTAAGGCGCCAGCCTaGCAGGTTGGAAAAGAGCCCAGGCAGCTACGAAGG | + |
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Preference number: 3 (lower is better) Translates to: LPNLRLSSKAPA*QVGKEPRQLRR Trigger: CCTTCGTAGCTGCCTGGGCTCTTTTCCAACCTGTCAGGCTGGCGCCTTAGAACTGAGCCTTAGGTTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR TCA 72 bp | TACCTGCTCGCTGCCAGCTTCCTCACTGTGGAGGGATaGAGAGCTTGCTGCCAGCTGCCAGATGTGACTGAC | + |
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Preference number: 3 (lower is better) Translates to: YLLAASFLTVEG*RACCQLPDVTD Trigger: GTCAGTCACATCTGGCAGCTGGCAGCAAGCTCTTCATCCCTCCACAGTGAGGAAGCTGGCAGCGAGCAGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CAA 90 bp | CAGAACAGAAGAAACCAAACCAAACTTGTGTGTAAACCTGTGGGCGCCGCTGCAGGCCCCAGGTCAGTGTaGGTGGCACTGGACACCTTG | + |
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Preference number: 3 (lower is better) Translates to: QNRRNQTKLVCKPVGAAAGPRSV*VALDTL Trigger: CAAGGTGTCCAGTGCCACCAACACTGACCTGGGGCC...TGCAGCGGCGCCCACAGGTTTACACACAAGTTTGGTTTGGTTTCTTCTGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CAA 90 bp | GGCGGCCTGGGAGCTGACACTAGGAGTCTGTCAGCATCAAGCAGACAGCTCAGCAGGAAGGAGCTGGACTaGAAAGTGGATGGTACTTCT | + |
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Preference number: 3 (lower is better) Translates to: GGLGADTRSLSASSRQLSRKELD*KVDGTS Trigger: AGAAGTACCATCCACTTTCAAGTCCAGCTCCTTCCT...GCTGAGCTGTCTGCTTGATGCTGACAGACTCCTAGTGTCAGCTCCCAGGCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CCA 72 bp | GACTTGAAAGTGGATGGTACTTCTGTCCCTGTGGGCTaGGAAAGGGAGCTGAGAGACAGAAAGCCCACGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLKVDGTSVPVG*ERELRDRKPTQ Trigger: CTGCGTGGGCTTTCTGTCTCTCAGCTCCCTTTCCCAGCCCACAGGGACAGAAGTACCATCCACTTTCAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CCA 72 bp | GCCAGTCATTCAGGAATGAGCAGCTCTAAGGCGGCCTaGGAGCTGACACTAGGAGTCTGTCAGCATCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: ASHSGMSSSKAA*ELTLGVCQHQA Trigger: TGCTTGATGCTGACAGACTCCTAGTGTCAGCTCCCAGGCCGCCTTAGAGCTGCTCATTCCTGAATGACTGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR GCA 72 bp | AACCTTAAGGGCTGTCACACACTGGGATTTCCTCTATaGAGAAGGGGGAGAGGCTCCCAAGAGTTACCTGGC | + |
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Preference number: 3 (lower is better) Translates to: NLKGCHTLGFPL*RRGRGSQELPG Trigger: GCCAGGTAACTCTTGGGAGCCTCTCCCCCTTCTGCATAGAGGAAATCCCAGTGTGTGACAGCCCTTAAGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR GCA 72 bp | TCAGCCCCAGCAGCCCAAAGTTCTTCCAGAGGCAGCTaGAGAGTAAGGTGGAAGAATCTCTTAGGAAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: SAPAAQSSSRGS*RVRWKNLLGRS Trigger: GCTCCTTCCTAAGAGATTCTTCCACCTTACTCTGCAGCTGCCTCTGGAAGAACTTTGGGCTGCTGGGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CCA 72 bp | GCAGAGGACAACAGAAAGCTTGCCATCCTCCAGCTGTaGCCCACAAGCACATATGTCACCACACACTTGTGC | + |
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Preference number: 3 (lower is better) Translates to: AEDNRKLAILQL*PTSTYVTTHLC Trigger: GCACAAGTGTGTGGTGACATATGTGCTTGTGGGCCACAGCTGGAGGATGGCAAGCTTTCTGTTGTCCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CCA 72 bp | ACAGAAGAAACCAAACCAAACTTGTGTGTAAACCTGTaGGCGCCGCTGCACTGCTCAGCCTACAGAGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: TEETKPNLCVNL*APLHCSAYREG Trigger: GCCCTCTCTGTAGGCTGAGCAGTGCAGCGGCGCCCACAGGTTTACACACAAGTTTGGTTTGGTTTCTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CAA 90 bp | ACCATTTGTAAAGGCCCCAGGTCAGTGTTGGTGGCACTGGACACCTTGGTACACGGCAGCTACGAAGGGTaGGAGAAAGTGAAGCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: TICKGPRSVLVALDTLVHGSYEG*EKVKQL Trigger: CAACTGCTTCACTTTCTCCAACCCTTCGTAGCTGCC...GTGTACCAAGGTGTCCAGTGCCACCAACACTGACCTGGGGCCTTTACAAATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR TCA 72 bp | AAAAGAGCCCAGGCAGCTACGAAGGGTTGGAGAAAGTaGAGCAGTTGGGCAGAAGCCTCCAGAACAATCACA | + |
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Preference number: 3 (lower is better) Translates to: KRAQAATKGWRK*SSWAEASRTIT Trigger: TGTGATTGTTCTGGAGGCTTCTGCCCAACTGCTTCACTTTCTCCAACCCTTCGTAGCTGCCTGGGCTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR TCA 72 bp | GTAAGGTGGAAGAATCTCTTAGGAAGGAGCTGGACTTaGAAGTGGATGGTACTTCTGTCCCTGTGGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: VRWKNLLGRSWT*KWMVLLSLWAG Trigger: CCCAGCCCACAGGGACAGAAGTACCATCCACTTTCAAGTCCAGCTCCTTCCTAAGAGATTCTTCCACCTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR GCA 72 bp | TGTCAACTCCACATAGGCAGAGGACAACAGAAAGCTTaGCATCCTCCAGCTGTGGCCCACAAGCACATATGT | + |
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Preference number: 3 (lower is better) Translates to: CQLHIGRGQQKA*HPPAVAHKHIC Trigger: ACATATGTGCTTGTGGGCCACAGCTGGAGGATGGCAAGCTTTCTGTTGTCCTCTGCCTATGTGGAGTTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR GCA 72 bp | ACAGAGAGGGCTGGGACAAACACAACCCGTCCACTGTaGTTTCTACGTTGGCAAAAGAACAAAGTCACCAGG | + |
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Preference number: 3 (lower is better) Translates to: TERAGTNTTRPL*FLRWQKNKVTR Trigger: CCTGGTGACTTTGTTCTTTTGCCAACGTAGAAAGCACAGTGGACGGGTTGTGTTTGTCCCAGCCCTCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CCA 72 bp | CTAACATTTGATTTCAGGAAGCCTTGTGGGGGCCCATaGTTAGATTGTACCTTGGTCCCCACATCCAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: LTFDFRKPCGGP*LDCTLVPTSRA Trigger: TGCCCTGGATGTGGGGACCAAGGTACAATCTAACCATGGGCCCCCACAAGGCTTCCTGAAATCAAATGTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR TCA 72 bp | ATCCCGAGACTGCAGCTACTCTCAACACCTAACATTTaGTTTCAGGAAGCCTTGTGGGGGCCCATGGTTAGA | + |
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Preference number: 3 (lower is better) Translates to: IPRLQLLSTPNI*FQEALWGPMVR Trigger: TCTAACCATGGGCCCCCACAAGGCTTCCTGAAATCAAATGTTAGGTGTTGAGAGTAGCTGCAGTCTCGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CAA 90 bp | AGAAACCAAACCAAACTTGTGTGTAAACCTGTGGGCGCCGCTGCACTGCTCAGCTATGTCACCACACACTaGTGCAAATTCAATACCAGG | + |
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Preference number: 3 (lower is better) Translates to: RNQTKLVCKPVGAAALLSYVTTH*CKFNTR Trigger: CCTGGTATTGAATTTGCACAAGTGTGTGGTGACATA...GCTGAGCAGTGCAGCGGCGCCCACAGGTTTACACACAAGTTTGGTTTGGTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR-3UTR CAA 90 bp | AATACCCAGGGACTCCAAAGTGCAGAACAGAAGAAACCAAACCAAACTTGTGTGACTGTGCTTTCTACGTaGGCAAAAGAACAAAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: NTQGLQSAEQKKPNQTCVTVLST*AKEQSH Trigger: GTGACTTTGTTCTTTTGCCAACGTAGAAAGCACAGT...CACACAAGTTTGGTTTGGTTTCTTCTGTTCTGCACTTTGGAGTCCCTGGGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR GCA 72 bp | TCAACTTGTAATGTGGAATACCCAGGGACTCCAAAGTaGAGAACAGAAGAAACCAAACCAAACTTGTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: STCNVEYPGTPK*RTEETKPNLCV Trigger: TACACACAAGTTTGGTTTGGTTTCTTCTGTTCTGCACTTTGGAGTCCCTGGGTATTCCACATTACAAGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR TCA 90 bp | GCCCAGCTCCCCATCCCTACTACTGTTCCACAAACCCTGCACCCTCCAGGACCCCTGTCGACCTGCTCCTaGGGCGTGGTCAGCGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: AQLPIPTTVPQTLHPPGPLSTCS*GVVSVV Trigger: CACCACGCTGACCACGCCTCAGGAGCAGGTCGACAG...GGGTCCTGGAGGGTGCAGGGTTTGTGGAACAGTAGTAGGGATGGGGAGCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR CCA 90 bp | GGGCTGGGAAAGGGAGCTGAGAGACAGAAAGCCCACGCAGACTCAGCCGGCCGGTGGCCTGCTCAGCCTTaGAGTCCTTCTCGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GLGKGAERQKAHADSAGRWPAQP*SPSRPS Trigger: AGAAGGCCGAGAAGGACTCCAAGGCTGAGCAGGCCA...CCGGCCGGCTGAGTCTGCGTGGGCTTTCTGTCTCTCAGCTCCCTTTCCCAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR CCA 90 bp | TTACCTGGCAAAGGAGCGATGGTTCTCACCCTCCCTGGCCGCAGCACAGAGCGGGAGGCGTGGTCAGCGTaGTGGCAGAGCTCACGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LPGKGAMVLTLPGRSTEREAWSA*WQSSRN Trigger: ATTCCGTGAGCTCTGCCACCACGCTGACCACGCCTC...CCGCTCTGTGCTGCGGCCAGGGAGGGTGAGAACCATCGCTCCTTTGCCAGGTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR CCA 90 bp | TTCTCACCCTCCCTGGCCGCAGCACAGAGCGGGTGTGCAGTCGCTGGAGTCTCACCTGGGCCATATTCTTaGTCACCCCCTTCATGGTCA | + |
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Preference number: 4 (lower is better) Translates to: FSPSLAAAQSGCAVAGVSPGPYS*SPPSWS Trigger: TGACCATGAAGGGGGTGACCAAGAATATGGCCCAGG...TGAGACTCCAGCGACTGCACACCCGCTCTGTGCTGCGGCCAGGGAGGGTGAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR CCA 90 bp | AGAAACCAAACCAAACTTGTGTGTAAACCTGTGGGCGCCGCTGCACTGCTCAGCCCTGCTCCTGAGGCGTaGTCAGCGTGGTGGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RNQTKLVCKPVGAAALLSPAPEA*SAWWQS Trigger: GCTCTGCCACCACGCTGACCACGCCTCAGGAGCAGG...GCTGAGCAGTGCAGCGGCGCCCACAGGTTTACACACAAGTTTGGTTTGGTTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR CCA 90 bp | AGCACTGGGCTCAAGTCCAGACACATCTGCAGGCCAAACCCTGTCAACTCCACACCTTCTGAAGGTCCATaGCGCTCAGGGCCTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: STGLKSRHICRPNPVNSTPSEGP*RSGPCP Trigger: TGGACAAGGCCCTGAGCGCCATGGACCTTCAGAAGG...TGTGGAGTTGACAGGGTTTGGCCTGCAGATGTGTCTGGACTTGAGCCCAGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR TCA 90 bp | AGCACAGAGCGGGTGTGCAGTCGCTGGAGTCTCAAGGCCCCAAAGCACTGGGCTTCCACATTTTTCTGCTaGAGGGCCTTCTTCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: STERVCSRWSLKAPKHWASTFFC*RAFFTL Trigger: CAAAGTGAAGAAGGCCCTTCAGCAGAAAAATGTGGA...AGCCCAGTGCTTTGGGGCCTTGAGACTCCAGCGACTGCACACCCGCTCTGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CAA 72 bp | GACAGGTTGGAAAAGAGCCCAGGCAGCTACGAAGGGTaGGAGAAAGTGAAGCAGTTGGGCAGAAGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: DRLEKSPGSYEG*EKVKQLGRSLQ Trigger: CTGGAGGCTTCTGCCCAACTGCTTCACTTTCTCCAACCCTTCGTAGCTGCCTGGGCTCTTTTCCAACCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR TCA 90 bp | CAAGTCCAGACACATCTGCAGGCCAAACCCTGTCAACTCCACATAGGCAGAGGACCAGCTGCTTCGCTGTaGACTTCAACTGGAACAGGG | + |
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Preference number: 4 (lower is better) Translates to: QVQTHLQAKPCQLHIGRGPAASL*TSTGTG Trigger: CCCTGTTCCAGTTGAAGTTCACAGCGAAGCAGCTGG...TCCTCTGCCTATGTGGAGTTGACAGGGTTTGGCCTGCAGATGTGTCTGGACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR CCA 90 bp | TCCCCACATCCAGGGCAACAATTCCAGCCCCCACCTATAACATCAACTTGTAATAACCTCCGGGACAGCTaGTCCTCCTGGCTGCGCACA | + |
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Preference number: 4 (lower is better) Translates to: SPHPGQQFQPPPITSTCNNLRDS*SSWLRT Trigger: TGTGCGCAGCCAGGAGGACCAGCTGTCCCGGAGGTT...ATTACAAGTTGATGTTATAGGTGGGGGCTGGAATTGTTGCCCTGGATGTGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CAA 72 bp | ACTCAGGCTCCCTCTGTTAGCCAGCCAGGCTCTCCCTaGGAGAAGGCTGAAAGCAGCAGCCTTTGTCTAAAA | + |
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Preference number: 4 (lower is better) Translates to: TQAPSVSQPGSP*EKAESSSLCLK Trigger: TTTTAGACAAAGGCTGCTGCTTTCAGCCTTCTCCAAGGGAGAGCCTGGCTGGCTAACAGAGGGAGCCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR GCA 90 bp | GGAGAGCAACCATTTGTAAAGGCCCCAGGTCAGTGTTGGTGGCACTGGACACCTTCCATTACCGATGTGTaGACATCCAGGTTCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: GEQPFVKAPGQCWWHWTPSITDV*TSRFCT Trigger: GGTGCAGAACCTGGATGTGCACACATCGGTAATGGA...AGGTGTCCAGTGCCACCAACACTGACCTGGGGCCTTTACAAATGGTTGCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CAA 72 bp | CAGCTGTGGCCCACAAGCACATATGTCACCACACACTaGTGCAAATTCAATACCAGGACAGAGACCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QLWPTSTYVTTH*CKFNTRTETRC Trigger: GCAGCGGGTCTCTGTCCTGGTATTGAATTTGCACAAGTGTGTGGTGACATATGTGCTTGTGGGCCACAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CAA 72 bp | CTGTCAACTCCACATAGGCAGAGGACAACAGAAAGCTaGCCATCCTCCAGCTGTGGCCCACAAGCACATATG | + |
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Preference number: 4 (lower is better) Translates to: LSTPHRQRTTES*PSSSCGPQAHM Trigger: CATATGTGCTTGTGGGCCACAGCTGGAGGATGGCAAGCTTTCTGTTGTCCTCTGCCTATGTGGAGTTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR CCA 90 bp | GTAGACACCAGGACCGCAGCCCTGGGAAGATGGAGGAGAGCAACCATTTGTAAATTTTCCTCAGCTATCTaGACAATGAGGCTGTCGACC | + |
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Preference number: 4 (lower is better) Translates to: VDTRTAALGRWRRATICKFSSAI*TMRLST Trigger: GGTCGACAGCCTCATTGTCCAGATAGCTGAGGAAAA...TTTACAAATGGTTGCTCTCCTCCATCTTCCCAGGGCTGCGGTCCTGGTGTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| 3UTR CAA 72 bp | AGTAAGGTGGAAGAATCTCTTAGGAAGGAGCTGGACTaGAAAGTGGATGGTACTTCTGTCCCTGTGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SKVEESLRKELD*KVDGTSVPVGW Trigger: CCAGCCCACAGGGACAGAAGTACCATCCACTTTCAAGTCCAGCTCCTTCCTAAGAGATTCTTCCACCTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR GCA 90 bp | TGGAATACCCAGGGACTCCAAAGTGCAGAACAGAAGAAACCAAACCAAACTTGTTGCACATCCAGGTTCTaGACCTGCTGCTCAAACCTG | + |
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Preference number: 4 (lower is better) Translates to: WNTQGLQSAEQKKPNQTCCTSRF*TCCSNL Trigger: CAGGTTTGAGCAGCAGGTGCAGAACCTGGATGTGCA...ACAAGTTTGGTTTGGTTTCTTCTGTTCTGCACTTTGGAGTCCCTGGGTATTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR CAA 90 bp | AGCACTGGGCTCAAGTCCAGACACATCTGCAGGCCAAACCCTGTCAACTCCACATTGGCCTGCTCAGCCTaGGAGTCCTTCTCGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: STGLKSRHICRPNPVNSTLACSA*ESFSAF Trigger: GAAGGCCGAGAAGGACTCCAAGGCTGAGCAGGCCAA...TGTGGAGTTGACAGGGTTTGGCCTGCAGATGTGTCTGGACTTGAGCCCAGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR CAA 90 bp | GTAGACACCAGGACCGCAGCCCTGGGAAGATGGAGGAGAGCAACCATTTGTAAAAGGGCCTTCTTCACTTaGGCCTGCTCAGCCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: VDTRTAALGRWRRATICKRAFFT*ACSALE Trigger: CTCCAAGGCTGAGCAGGCCAAAGTGAAGAAGGCCCT...TTTACAAATGGTTGCTCTCCTCCATCTTCCCAGGGCTGCGGTCCTGGTGTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS-3UTR CAA 90 bp | CAGCCCTGGGAAGATGGAGGAGAGCAACCATTTGTAAAGGCCCCAGGTCAGTGTACACCTTCATTCTTCTaGCGGATGGCATTTTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: QPWEDGGEQPFVKAPGQCTPSFF*RMAFSA Trigger: TGCTGAAAATGCCATCCGCAAGAAGAATGAAGGTGT...ACACTGACCTGGGGCCTTTACAAATGGTTGCTCTCCTCCATCTTCCCAGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS TCA 72 bp | TCAGCTATCTGGACAATGAGGCTGTCGACCTGCTCCTaGGGCGTGGTCAGCGTGGTGGCAGAGCTCACGGAA | + |
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Preference number: 6 (lower is better) Translates to: SAIWTMRLSTCS*GVVSVVAELTE Trigger: TTCCGTGAGCTCTGCCACCACGCTGACCACGCCTCAGGAGCAGGTCGACAGCCTCATTGTCCAGATAGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS CAA 90 bp | TCCACACGGGAGGCCATTCGGAGCCAATTTACACCTTCATTCTTCTaGCGGATGGCATTTTCAGCATACACCCGGGCACACTCCACATTT | + |
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Preference number: 6 (lower is better) Translates to: STREAIRSQFTPSFF*RMAFSAYTRAHSTF Trigger: AAATGTGGAGTGTGCCCGGGTGTATGCTGAAAATGCCATCCGCAAGAAGAATGAAGGTGTAAATTGGCTCCGAATGGCCTCCCGTGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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| CDS GCA 72 bp | AGGCCATTCGGAGCCAATTTACACCTTCATTCTTCTTaGGGATGGCATTTTCAGCATACACCCGGGCACACT | + |
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Preference number: 6 (lower is better) Translates to: RPFGANLHLHSS*GWHFQHTPGHT Trigger: AGTGTGCCCGGGTGTATGCTGAAAATGCCATCCGCAAGAAGAATGAAGGTGTAAATTGGCTCCGAATGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000759.9 |
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