Pregenerated sensors for CHML (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078185Ensembl transcript IDs: ENSMUST00000104984.4, ENSMUST00000209720.2, ENSMUST00000210367.2, ENSMUST00000211489.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCACTCCCCAGTCCCCAGTCAGGCCCAGAGCAGATGTACACATTaGAAGGTAAGCCACAGTATGAGCTTCGGCTCACTCCTGAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: AHSPVPSQAQSRCTH*KVSHSMSFGSLLRN Trigger: ATTCCTCAGGAGTGAGCCGAAGCTCATACTGTGGCTTACCTTCCAATGTGTACATCTGCTCTGGGCCTGACTGGGGACTGGGGAGTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR CCA 90 bp | CCCGAACAGAAGTGGTTCCTGGCTCCAGAGGAGGCACTACCAAAATaGAAATCTGCTGGTCCGAATCTGTCTTCAGGATGGACTGATCTG | + |
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Preference number: 1 (lower is better) Translates to: PEQKWFLAPEEALPK*KSAGPNLSSGWTDL Trigger: CAGATCAGTCCATCCTGAAGACAGATTCGGACCAGCAGATTTCCATTTTGGTAGTGCCTCCTCTGGAGCCAGGAACCACTTCTGTTCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR CCA 90 bp | GAGGATTGTTTTGTTTTGAAATTGTCTCAACACTGTAGCCCAGACTaGCTTGGGTTACAGCAATCCTCCTGCCTCAGTCTCCTGAATGAC | + |
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Preference number: 1 (lower is better) Translates to: EDCFVLKLSQHCSPD*LGLQQSSCLSLLND Trigger: GTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAACCCAAGCCAGTCTGGGCTACAGTGTTGAGACAATTTCAAAACAAAACAATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR TCA 90 bp | GTTTTCGGAGTTCATCTTTGCCTGCTTCTGCTTCTGCTTCAGGAATaGATAACTGCTTCACCACAGGTTCCAAGTCTTCTCTGGCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: VFGVHLCLLLLLLQE*ITASPQVPSLLWLF Trigger: AAACAGCCAGAGAAGACTTGGAACCTGTGGTGAAGCAGTTATTCATTCCTGAAGCAGAAGCAGAAGCAGGCAAAGATGAACTCCGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR GCA 90 bp | ATCTGCTCTGGAGCAAGGCACCTGTTCTACCTTCCCTTCCCAAAATaGAAGGATCCTAGTGACATTCTTAAATTCTGCATAACGACTAAC | + |
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Preference number: 1 (lower is better) Translates to: ICSGARHLFYLPFPK*KDPSDILKFCITTN Trigger: GTTAGTCGTTATGCAGAATTTAAGAATGTCACTAGGATCCTTGCATTTTGGGAAGGGAAGGTAGAACAGGTGCCTTGCTCCAGAGCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR TCA 90 bp | GAAAGAACACCGTATAGATCTAGGTTGAGGGCTCTTCTGAGGTACTaGTGCTGTAATAAAATCTCGACTTGTGATGTTCATTCGGAAACA | + |
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Preference number: 1 (lower is better) Translates to: ERTPYRSRLRALLRY*CCNKISTCDVHSET Trigger: TGTTTCCGAATGAACATCACAAGTCGAGATTTTATTACAGCATCAGTACCTCAGAAGAGCCCTCAACCTAGATCTATACGGTGTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR CCA 90 bp | GTGAACAGTGTTTCTTACACAGTTACTGCTGCTTATTCTTTCATATaGCAATGTTTTGAAGCCAGGATGAAGCATTTCCAGTGTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: VNSVSYTVTAAYSFI*QCFEARMKHFQCFL Trigger: AAGGAAACACTGGAAATGCTTCATCCTGGCTTCAAAACATTGCCATATGAAAGAATAAGCAGCAGTAACTGTGTAAGAAACACTGTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR TCA 90 bp | ATACCTCTTTTAAATGTCTGTGGAATAATAGACTGTCGTCCTGACTaGCTTTATATAGTGGGCTTGAATTGCTCTCACTTTTTACCATCC | + |
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Preference number: 1 (lower is better) Translates to: IPLLNVCGIIDCRPD*LYIVGLNCSHFLPS Trigger: GGATGGTAAAAAGTGAGAGCAATTCAAGCCCACTATATAAAGTCAGTCAGGACGACAGTCTATTATTCCACAGACATTTAAAAGAGGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR GCA 90 bp | TTTCAGCCATATACAGATGAAAATAGTAGCAAGGCCTTTCATTTCTaGTTGAGAAATGGTTCATACCTGCTTTCCCAATATAAATTTGAG | + |
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Preference number: 1 (lower is better) Translates to: FQPYTDENSSKAFHF*LRNGSYLLSQYKFE Trigger: CTCAAATTTATATTGGGAAAGCAGGTATGAACCATTTCTCAAGCAGAAATGAAAGGCCTTGCTACTATTTTCATCTGTATATGGCTGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR CAA 90 bp | TGCTCACTCCCCAGTCCCCAGTCAGGCCCAGAGCAGATGTACACATaGGAAGGTAAGCCACAGTATGAGCTTCGGCTCACTCCTGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: CSLPSPQSGPEQMYT*EGKPQYELRLTPEE Trigger: TTCCTCAGGAGTGAGCCGAAGCTCATACTGTGGCTTACCTTCCAATGTGTACATCTGCTCTGGGCCTGACTGGGGACTGGGGAGTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGAGCTCCAGGACAGCCAGGGTTACACAGAGAAACCCCGTCTTGAAAAACTAATGCAGCTGCCAGGATaGACTCCGGCAAGCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: IELQDSQGYTEKPRLEKLMQLPG*TPASLS Trigger: GGACAGGCTTGCCGGAGTCCATCCTGGCAGCTGCAT...TAGTTTTTCAAGACGGGGTTTCTCTGTGTAACCCTGGCTGTCCTGGAGCTCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR CAA 90 bp | GTCTTGCCATGTGGCGGTCACGCCTTCCTCGCTGTCATGGTTCTGTaGATAGTCCTTCAGCCAGGACTGCAAACCTGTAAAGCTGAAACT | + |
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Preference number: 2 (lower is better) Translates to: VLPCGGHAFLAVMVL*IVLQPGLQTCKAET Trigger: AGTTTCAGCTTTACAGGTTTGCAGTCCTGGCTGAAGGACTATCAACAGAACCATGACAGCGAGGAAGGCGTGACCGCCACATGGCAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCCTGGAGCCAATTCTGAAACAAAAGAGCCGAGTCACCAACAGAGCTGTTGCGTGGCATGCTTCACCTaGGAAGCCTGGATGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: IPGANSETKEPSHQQSCCVACFT*EAWMGK Trigger: TTTCCCCATCCAGGCTTCTCAGGTGAAGCATGCCAC...GCAACAGCTCTGTTGGTGACTCGGCTCTTTTGTTTCAGAATTGGCTCCAGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCCTGGAGCCAATTCTGAAACAAAAGAGCCGAGTCACCAACAGAGCTGTTGCGTCTTCAGGATGGACTaGTCTGTGATGAGCACTGCC | + |
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Preference number: 2 (lower is better) Translates to: IPGANSETKEPSHQQSCCVFRMD*SVMSTA Trigger: GGCAGTGCTCATCACAGATCAGTCCATCCTGAAGAC...GCAACAGCTCTGTTGGTGACTCGGCTCTTTTGTTTCAGAATTGGCTCCAGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR GCA 90 bp | TTACAGCAATCCTCCTGCCTCAGTCTCCTGAATGACAGGATTACACGAGTGAGCAACAGTGTTTCCGCCTaGTTGACTGCATGCTCACTC | + |
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Preference number: 2 (lower is better) Translates to: LQQSSCLSLLNDRITRVSNSVSA*LTACSL Trigger: GAGTGAGCATGCAGTCAAGCAGGCGGAAACACTGTT...GCTCACTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCTGGAGCCAATTCTGAAACAAAAGAGCCGAGTCACCAACAGAGCTGTTGCTTCCAGCCAACCAGGTaGCATGCTTCACCTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: IPGANSETKEPSHQQSCCFQPTR*HASPEK Trigger: CTTCTCAGGTGAAGCATGCCACCTGGTTGGCTGGAA...GCAACAGCTCTGTTGGTGACTCGGCTCTTTTGTTTCAGAATTGGCTCCAGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR TCA 90 bp | TTACAGCAATCCTCCTGCCTCAGTCTCCTGAATGACAGGATTACACGAGTGAGCCCCACCTACCCGGAATaGGGACCTTTGTTTGATTTT | + |
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Preference number: 2 (lower is better) Translates to: LQQSSCLSLLNDRITRVSPTYPE*GPLFDF Trigger: AAAATCAAACAAAGGTCCTCATTCCGGGTAGGTGGG...GCTCACTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR GCA 90 bp | TTACAGCAATCCTCCTGCCTCAGTCTCCTGAATGACAGGATTACACGAGTGAGCACGAGTGAGCCACCATaGCCAGATTGTGATGAATCT | + |
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Preference number: 2 (lower is better) Translates to: LQQSSCLSLLNDRITRVSTSEPP*PDCDES Trigger: AGATTCATCACAATCTGGGCATGGTGGCTCACTCGT...GCTCACTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCTGGAGCCAATTCTGAAACAAAAGAGCCGAGTCACCAACAGAGCTGTTGCATTCATGTGAATGGCTaGCTGGCCCTGCTTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: IPGANSETKEPSHQQSCCIHVNG*LALLSS Trigger: TGAGGAAAGCAGGGCCAGCCAGCCATTCACATGAAT...GCAACAGCTCTGTTGGTGACTCGGCTCTTTTGTTTCAGAATTGGCTCCAGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTATGTATCTGAGGTGGTACCAACAACAGTAGCGGCAGCAGTAGCTATAATACACTGTAGCCCAGACTaGCTTGGGTTACAGCAATCC | + |
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Preference number: 2 (lower is better) Translates to: LYVSEVVPTTVAAAVAIIHCSPD*LGLQQS Trigger: GGATTGCTGTAACCCAAGCCAGTCTGGGCTACAGTG...TATTATAGCTACTGCTGCCGCTACTGTTGTTGGTACCACCTCAGATACATAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR CAA 90 bp | ACTTCTCTGCAGAGTCTCGGTGTCTTGCACGCTGTCCTCCACATCTaGACTAGCATAACAGAAGACTTCTGTGTGCTGAATAGTTTCATC | + |
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Preference number: 2 (lower is better) Translates to: TSLQSLGVLHAVLHI*TSITEDFCVLNSFI Trigger: GATGAAACTATTCAGCACACAGAAGTCTTCTGTTATGCTAGTCAAGATGTGGAGGACAGCGTGCAAGACACCGAGACTCTGCAGAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAGCTCCAGGACAGCCAGGGTTACACAGAGAAACCCCGTCTTGAAAAACTAGCTTCGGCTCACTCCTaGGGAATCTCTCATATTAAA | + |
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Preference number: 2 (lower is better) Translates to: IELQDSQGYTEKPRLEKLASAHS*GISHIK Trigger: TTTAATATGAGAGATTCCTCAGGAGTGAGCCGAAGC...TAGTTTTTCAAGACGGGGTTTCTCTGTGTAACCCTGGCTGTCCTGGAGCTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR GCA 90 bp | GTGAATGATGTGAGGTCTTTCTGTGTTTATAGCATTTTCTTCAAGATAGGTCTCGCCTGCTTGACTGCATaGTCACTCCCCAGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VNDVRSFCVYSIFFKIGLACLTA*SLPSPQ Trigger: CTGGGGACTGGGGAGTGAGCATGCAGTCAAGCAGGC...GAGACCTATCTTGAAGAAAATGCTATAAACACAGAAAGACCTCACATCATTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTATGTATCTGAGGTGGTACCAACAACAGTAGCGGCAGCAGTAGCTATAATAGCTTGTAGAGTAAGCTaGCTGCCTTTCTTTGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: LYVSEVVPTTVAAAVAIIACRVS*LPFFGQ Trigger: TTGCCCAAAGAAAGGCAGTCAGCTTACTCTACAAGC...TATTATAGCTACTGCTGCCGCTACTGTTGTTGGTACCACCTCAGATACATAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTATGTATCTGAGGTGGTACCAACAACAGTAGCGGCAGCAGTAGCTATAATAGATGAGCACTGCCCTTaGGATCTGCTTATATTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LYVSEVVPTTVAAAVAIIDEHCP*DLLILH Trigger: GTGCAATATAAGCAGATCTCAAGGGCAGTGCTCATC...TATTATAGCTACTGCTGCCGCTACTGTTGTTGGTACCACCTCAGATACATAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR GCA 90 bp | TTACAGCAATCCTCCTGCCTCAGTCTCCTGAATGACAGGATTACACGAGTGAGCGAGTGTAGTATGAAGTaGTGGAGATTAGGTGTTAGT | + |
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Preference number: 2 (lower is better) Translates to: LQQSSCLSLLNDRITRVSECSMK*WRLGVS Trigger: ACTAACACCTAATCTCCAGCACTTCATACTACACTC...GCTCACTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAGCAATCCTCCTGCCTCAGTCTCCTGAATGACAGGATTACACGAGTGAGCTTTCTGCTTGAGAAATaGTTCATACCTGCTTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LQQSSCLSLLNDRITRVSFLLEK*FIPAFP Trigger: TGGGAAAGCAGGTATGAACCATTTCTCAAGCAGAAA...GCTCACTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTTTTCGGAGTTCATCTTTGCCTGCTTCTGCTTCTGCTTCAGGAATGAATCTGACTGCCTTTCTTTaGGCAAGCTTGCAGAATCCA | + |
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Preference number: 2 (lower is better) Translates to: LGFRSSSLPASASASGMNLTAFL*ASLQNP Trigger: TGGATTCTGCAAGCTTGCCCAAAGAAAGGCAGTCAG...ATTCATTCCTGAAGCAGAAGCAGAAGCAGGCAAAGATGAACTCCGAAAACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAGCTCCAGGACAGCCAGGGTTACACAGAGAAACCCCGTCTTGAAAAACTAAATGCAGTCTTCCTATaGGCAGCTTCTAAATACTTC | + |
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Preference number: 2 (lower is better) Translates to: IELQDSQGYTEKPRLEKLNAVFL*AASKYF Trigger: GAAGTATTTAGAAGCTGCTCATAGGAAGACTGCATT...TAGTTTTTCAAGACGGGGTTTCTCTGTGTAACCCTGGCTGTCCTGGAGCTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGAGCTCCAGGACAGCCAGGGTTACACAGAGAAACCCCGTCTTGAAAAACTAATAGTGGGCTTGAATTaGTCTCACTTTTTACCATCC | + |
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Preference number: 2 (lower is better) Translates to: IELQDSQGYTEKPRLEKLIVGLN*SHFLPS Trigger: GGATGGTAAAAAGTGAGAGCAATTCAAGCCCACTAT...TAGTTTTTCAAGACGGGGTTTCTCTGTGTAACCCTGGCTGTCCTGGAGCTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTTTTCGGAGTTCATCTTTGCCTGCTTCTGCTTCTGCTTCAGGAATGAATACACAGGAGCAAGTGTaGTATTCCCTTAAGGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: LGFRSSSLPASASASGMNTQEQV*YSLKVN Trigger: GTTTACCTTAAGGGAATATCACACTTGCTCCTGTGT...ATTCATTCCTGAAGCAGAAGCAGAAGCAGGCAAAGATGAACTCCGAAAACCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR CCA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACGAGGGTTTTCACTGCTaGGGTGTAGCAGGTAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNEGFHC*GVAGSS Trigger: AGAACTACCTGCTACACCCCAGCAGTGAAAACCCTC...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGAGCTCCAGGACAGCCAGGGTTACACAGAGAAACCCCGTCTTGAAAAACTATTTATAGACGGTGAATaGAAGCTGAAAGTGATTGCT | + |
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Preference number: 2 (lower is better) Translates to: IELQDSQGYTEKPRLEKLFIDGE*KLKVIA Trigger: AGCAATCACTTTCAGCTTCCATTCACCGTCTATAAA...TAGTTTTTCAAGACGGGGTTTCTCTGTGTAACCCTGGCTGTCCTGGAGCTCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTATGTATCTGAGGTGGTACCAACAACAGTAGCGGCAGCAGTAGCTATAATATCTTGCGAAGAGAGATaGCTTCTTCTGTTTCATGGA | + |
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Preference number: 2 (lower is better) Translates to: LYVSEVVPTTVAAAVAIISCEER*LLLFHG Trigger: TCCATGAAACAGAAGAAGCCATCTCTCTTCGCAAGA...TATTATAGCTACTGCTGCCGCTACTGTTGTTGGTACCACCTCAGATACATAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGATGTACACATTGGAAGGTAAGCCACAGTATGAGCTTCGGCTCACTCCTAATCCTATTTCTCTTTaGTTGTTCAATGCTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: EQMYTLEGKPQYELRLTPNPISL*LFNAVL Trigger: CAAGACAGCATTGAACAACCAAAGAGAAATAGGATT...AGGAGTGAGCCGAAGCTCATACTGTGGCTTACCTTCCAATGTGTACATCTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTTTTCGGAGTTCATCTTTGCCTGCTTCTGCTTCTGCTTCAGGAATGAATCATATGGCAATGTTTTaGAGCCAGGATGAAGCATTT | + |
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Preference number: 2 (lower is better) Translates to: LGFRSSSLPASASASGMNHMAMF*SQDEAF Trigger: AAATGCTTCATCCTGGCTTCAAAACATTGCCATATG...ATTCATTCCTGAAGCAGAAGCAGAAGCAGGCAAAGATGAACTCCGAAAACCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGATCATATATTAGCCTGTAGTTACATGCCTTCTGATTCCTTTCAGTGTAGACCTGCCTCAGTCTCCTaGATGACAGGATTACACGAG | + |
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Preference number: 2 (lower is better) Translates to: KDHILACSYMPSDSFQCRPASVS*MTGLHE Trigger: CTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGG...TCTACACTGAAAGGAATCAGAAGGCATGTAACTACAGGCTAATATATGATCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAAAAAAGTCAGTAGTTTaGAAAACACGACAAAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VLGVSSLVVSVLLTPGLPKKSVV*KTRQSA Trigger: TGCACTTTGTCGTGTTTTCCAAACTACTGACTTTTT...TGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAGGAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR TCA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACGGAGTAAGAATATACTaGGAGCATACTGTAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNGVRIY*EHTVVP Trigger: GGGGACTACAGTATGCTCTCAGTATATTCTTACTCC...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTTTTCGGAGTTCATCTTTGCCTGCTTCTGCTTCTGCTTCAGGAATGAATGCTTATTCTTTCATATaGCAATGTTTTGAAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LGFRSSSLPASASASGMNAYSFI*QCFEAR Trigger: CCTGGCTTCAAAACATTGCCATATGAAAGAATAAGC...ATTCATTCCTGAAGCAGAAGCAGAAGCAGGCAAAGATGAACTCCGAAAACCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR TCA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACCCTTTCATTTCTGCTTaGGAAATGGTTCATACCTGC | + |
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Preference number: 2 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNPFISA*EMVHTC Trigger: GCAGGTATGAACCATTTCTCAAGCAGAAATGAAAGG...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR TCA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACACCTTTATCTTCACCTaGAACTGTGTGCATATCCGT | + |
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Preference number: 2 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNTFIFT*NCVHIR Trigger: ACGGATATGCACACAGTTTCAGGTGAAGATAAAGGT...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGTTTTCGGAGTTCATCTTTGCCTGCTTCTGCTTCTGCTTCAGGAATGAATTTACACAGTTACTGCTaGTTATTCTTTCATATGGCA | + |
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Preference number: 2 (lower is better) Translates to: LGFRSSSLPASASASGMNLHSYC*LFFHMA Trigger: TGCCATATGAAAGAATAAGCAGCAGTAACTGTGTAA...ATTCATTCCTGAAGCAGAAGCAGAAGCAGGCAAAGATGAACTCCGAAAACCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGATCATATATTAGCCTGTAGTTACATGCCTTCTGATTCCTTTCAGTGTAGAACGAGTGAGCCACCATaGCCAGATTGTGATGAATCT | + |
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Preference number: 2 (lower is better) Translates to: KDHILACSYMPSDSFQCRTSEPP*PDCDES Trigger: AGATTCATCACAATCTGGGCATGGTGGCTCACTCGT...TCTACACTGAAAGGAATCAGAAGGCATGTAACTACAGGCTAATATATGATCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR-3UTR GCA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACTCAGGAATGAATAACTaGTTCACCACAGGTTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNSGMNN*FTTGSK Trigger: CTTGGAACCTGTGGTGAAGCAGTTATTCATTCCTGA...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGAATGATGTGAGGTCTTTCTGTGTTTATAGCATTTTCTTCAAGATAGGTCTCAGTTCCATATGTGTTTaGAGGGTTGCTAACCCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: VNDVRSFCVYSIFFKIGLSSICV*RVANPQ Trigger: CTGAGGGTTAGCAACCCTCCAAACACATATGGAACT...GAGACCTATCTTGAAGAAAATGCTATAAACACAGAAAGACCTCACATCATTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR CAA 90 bp | ATCCTATTTCTCTTTGGTTGTTCAATGCTGTCTTGTACAACAAGTTaGTGTTCACCTTTATCTTCACCTGAAACTGTGTGCATATCCGTC | + |
|
Preference number: 2 (lower is better) Translates to: ILFLFGCSMLSCTTS*CSPLSSPETVCISV Trigger: GACGGATATGCACACAGTTTCAGGTGAAGATAAAGGTGAACACAAACTTGTTGTACAAGACAGCATTGAACAACCAAAGAGAAATAGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGATCATATATTAGCCTGTAGTTACATGCCTTCTGATTCCTTTCAGTGTAGAGTTTTGAAGCCAGGATaGAGCATTTCCAGTGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KDHILACSYMPSDSFQCRVLKPG*SISSVS Trigger: GGAAACACTGGAAATGCTTCATCCTGGCTTCAAAAC...TCTACACTGAAAGGAATCAGAAGGCATGTAACTACAGGCTAATATATGATCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR TCA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACAAGACTTCTGTGTGCTaGATAGTTTCATCCTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNKTSVC*IVSSFL Trigger: CAAGAAGGATGAAACTATTCAGCACACAGAAGTCTT...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGAATGATGTGAGGTCTTTCTGTGTTTATAGCATTTTCTTCAAGATAGGTCTCCCTGAGAAGCCTGGATaGGGAAATCTATCTAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: VNDVRSFCVYSIFFKIGLPEKPG*GNLSKM Trigger: CATTTTAGATAGATTTCCCCATCCAGGCTTCTCAGG...GAGACCTATCTTGAAGAAAATGCTATAAACACAGAAAGACCTCACATCATTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGATCATATATTAGCCTGTAGTTACATGCCTTCTGATTCCTTTCAGTGTAGATCCATAGTAACTCCTTaGGTCAACATGCAGAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: KDHILACSYMPSDSFQCRSIVTP*VNMQNS Trigger: AGAGTTCTGCATGTTGACTCAAGGAGTTACTATGGA...TCTACACTGAAAGGAATCAGAAGGCATGTAACTACAGGCTAATATATGATCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAGATCATATATTAGCCTGTAGTTACATGCCTTCTGATTCCTTTCAGTGTAGAAAACTGCACACATCCTaGAGAAACACTGGGGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: KDHILACSYMPSDSFQCRKLHTS*RNTGEF Trigger: AAATTCCCCAGTGTTTCTGCAGGATGTGTGCAGTTT...TCTACACTGAAAGGAATCAGAAGGCATGTAACTACAGGCTAATATATGATCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGAATGATGTGAGGTCTTTCTGTGTTTATAGCATTTTCTTCAAGATAGGTCTCACTGCCCTTGAGATCTaGTTATATTGCACGTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: VNDVRSFCVYSIFFKIGLTALEI*LYCTFE Trigger: TTCAAACGTGCAATATAAGCAGATCTCAAGGGCAGT...GAGACCTATCTTGAAGAAAATGCTATAAACACAGAAAGACCTCACATCATTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGATCATATATTAGCCTGTAGTTACATGCCTTCTGATTCCTTTCAGTGTAGACATATGGCAATGTTTTaGAGCCAGGATGAAGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: KDHILACSYMPSDSFQCRHMAMF*SQDEAF Trigger: AAATGCTTCATCCTGGCTTCAAAACATTGCCATATG...TCTACACTGAAAGGAATCAGAAGGCATGTAACTACAGGCTAATATATGATCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGAATGATGTGAGGTCTTTCTGTGTTTATAGCATTTTCTTCAAGATAGGTCTCAAACCTCTCAGTTTATaGTTTATGTGTCCCTCTATG | + |
|
Preference number: 2 (lower is better) Translates to: VNDVRSFCVYSIFFKIGLKPLSL*FMCPSM Trigger: CATAGAGGGACACATAAATCATAAACTGAGAGGTTT...GAGACCTATCTTGAAGAAAATGCTATAAACACAGAAAGACCTCACATCATTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAGATCATATATTAGCCTGTAGTTACATGCCTTCTGATTCCTTTCAGTGTAGATACAGTAGCTTTCCCTaGTTACTTTCCTGGATAACT | + |
|
Preference number: 2 (lower is better) Translates to: KDHILACSYMPSDSFQCRYSSFP*LLSWIT Trigger: AGTTATCCAGGAAAGTAAGCAGGGAAAGCTACTGTA...TCTACACTGAAAGGAATCAGAAGGCATGTAACTACAGGCTAATATATGATCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGAATGATGTGAGGTCTTTCTGTGTTTATAGCATTTTCTTCAAGATAGGTCTCGCTTATTCTTTCATATaGCAATGTTTTGAAGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VNDVRSFCVYSIFFKIGLAYSFI*QCFEAR Trigger: CCTGGCTTCAAAACATTGCCATATGAAAGAATAAGC...GAGACCTATCTTGAAGAAAATGCTATAAACACAGAAAGACCTCACATCATTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR CCA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACGCACGCAATAATTTCTaGTGTAAACTAACATTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNARNNF*CKLTLF Trigger: GAACAATGTTAGTTTACACCAGAAATTATTGCGTGC...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGATCATATATTAGCCTGTAGTTACATGCCTTCTGATTCCTTTCAGTGTAGACCCTGCTTACTTTCCTaGATAACTTATCACAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: KDHILACSYMPSDSFQCRPCLLS*ITYHNS Trigger: AGAATTGTGATAAGTTATCCAGGAAAGTAAGCAGGG...TCTACACTGAAAGGAATCAGAAGGCATGTAACTACAGGCTAATATATGATCTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAGATCATATATTAGCCTGTAGTTACATGCCTTCTGATTCCTTTCAGTGTAGATCTTTGGTTGTTCAATaGTGTCTTGTACAACAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KDHILACSYMPSDSFQCRSLVVQ*CLVQQV Trigger: AACTTGTTGTACAAGACAGCATTGAACAACCAAAGA...TCTACACTGAAAGGAATCAGAAGGCATGTAACTACAGGCTAATATATGATCTTT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR GCA 72 bp | ATCTCTTGGAACAGTGTTTCCGCCTGCTTGACTGCATaGTCACTCCCCAGTCCCCAGTCAGGCCCAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ISWNSVSACLTA*SLPSPQSGPEQ Trigger: CTGCTCTGGGCCTGACTGGGGACTGGGGAGTGAGCATGCAGTCAAGCAGGCGGAAACACTGTTCCAAGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR CCA 72 bp | CCAGTCCCCAGTCAGGCCCAGAGCAGATGTACACATTaGAAGGTAAGCCACAGTATGAGCTTCGGCTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: PVPSQAQSRCTH*KVSHSMSFGSL Trigger: GAGTGAGCCGAAGCTCATACTGTGGCTTACCTTCCAATGTGTACATCTGCTCTGGGCCTGACTGGGGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR GCA 72 bp | TGTAGCCCAGACTGGCTTGGGTTACAGCAATCCTCCTaGCTCAGTCTCCTGAATGACAGGATTACACGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: CSPDWLGLQQSS*LSLLNDRITRV Trigger: CACTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAACCCAAGCCAGTCTGGGCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR GCA 72 bp | TTAGTGCAGTTAGTACTAAGGGTTCTGTCCTGTTCCTaGGGAGGTATGGCTCCTCTACTGGACACAGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LVQLVLRVLSCS*GGMAPLLDTAL Trigger: GAGGGCTGTGTCCAGTAGAGGAGCCATACCTCCGCAGGAACAGGACAGAACCCTTAGTACTAACTGCACTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR CCA 72 bp | AAGTGGTTCCTGGCTCCAGAGGAGGCACTACCAAAATaGAAATCTGCTGGTCCGAATCTGTCTTCAGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: KWFLAPEEALPK*KSAGPNLSSGW Trigger: CCATCCTGAAGACAGATTCGGACCAGCAGATTTCCATTTTGGTAGTGCCTCCTCTGGAGCCAGGAACCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR CCA 72 bp | CCATTACCAGTGCTTATGAAATTCCAGCCAACCAGGTaGCATGCTTCACCTGAGAAGCCTGGATGGGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PLPVLMKFQPTR*HASPEKPGWGN Trigger: ATTTCCCCATCCAGGCTTCTCAGGTGAAGCATGCCACCTGGTTGGCTGGAATTTCATAAGCACTGGTAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGCAATCCTCCTGCCTCAGTCTCCTGAATGACAGGATTACACGAGTGAGCCCCAGTATCTCACTGTaGAAGACACGTGAACAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LQQSSCLSLLNDRITRVSPSISL*KTREQC Trigger: ACACTGTTCACGTGTCTTCAACAGTGAGATACTGGG...GCTCACTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTATGTATCTGAGGTGGTACCAACAACAGTAGCGGCAGCAGTAGCTATAATAGCTGACTGCCTTTCTTaGGGCAAGCTTGCAGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: LYVSEVVPTTVAAAVAIIADCLS*GKLAES Trigger: GGATTCTGCAAGCTTGCCCAAAGAAAGGCAGTCAGC...TATTATAGCTACTGCTGCCGCTACTGTTGTTGGTACCACCTCAGATACATAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGCAATCCTCCTGCCTCAGTCTCCTGAATGACAGGATTACACGAGTGAGCCCTATTTCTCTTTGGTaGTTCAATGCTGTCTTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LQQSSCLSLLNDRITRVSPISLW*FNAVLY Trigger: GTACAAGACAGCATTGAACAACCAAAGAGAAATAGG...GCTCACTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR TCA 72 bp | CTCTCAGTTTATGATTTATGTGTCCCTCTATGTATCTaGGGTGGTACCAACAACAGTAGCGGCAGCAGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSVYDLCVPLCI*GGTNNSSGSSS Trigger: GCTACTGCTGCCGCTACTGTTGTTGGTACCACCTCAGATACATAGAGGGACACATAAATCATAAACTGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR TCA 72 bp | GTCTCACTGCCTCCTGAGTTCCAACGGTCAAGCAGGTaGATGAATTCACATGTAATTATCAACCCGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: VSLPPEFQRSSR*MNSHVIINPKT Trigger: TGTCTTCGGGTTGATAATTACATGTGAATTCATTCACCTGCTTGACCGTTGGAACTCAGGAGGCAGTGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR TCA 72 bp | GGTATGGCTCCTCTACTGGACACAGCCCTCTGCTCCTaGGTCACTGTAAGTAATTCTTTCTGTTTGTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GMAPLLDTALCS*VTVSNSFCLLL Trigger: TAACAACAAACAGAAAGAATTACTTACAGTGACTCAGGAGCAGAGGGCTGTGTCCAGTAGAGGAGCCATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR TCA 72 bp | ATGTCTAGAAGGCACTTCATAGCTTGTAGAGTAAGCTaGCTGCCTTTCTTTGGGCAAGCTTGCAGAATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: MSRRHFIACRVS*LPFFGQACRIQ Trigger: CTGGATTCTGCAAGCTTGCCCAAAGAAAGGCAGTCAGCTTACTCTACAAGCTATGAAGTGCCTTCTAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR TCA 72 bp | GTTCATCTTTGCCTGCTTCTGCTTCTGCTTCAGGAATaGATAACTGCTTCACCACAGGTTCCAAGTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VHLCLLLLLLQE*ITASPQVPSLL Trigger: GAGAAGACTTGGAACCTGTGGTGAAGCAGTTATTCATTCCTGAAGCAGAAGCAGAAGCAGGCAAAGATGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR GCA 72 bp | ACTGTAAGTAATTCTTTCTGTTTGTTGTTAGCTCTTTaGCAACACTGTATTCTGCAGCTCCCACCTACCCGG | + |
|
Preference number: 3 (lower is better) Translates to: TVSNSFCLLLAL*QHCILQLPPTR Trigger: CCGGGTAGGTGGGAGCTGCAGAATACAGTGTTGGCAAAGAGCTAACAACAAACAGAAAGAATTACTTACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAGCTCCAGGACAGCCAGGGTTACACAGAGAAACCCCGTCTTGAAAAACTATGTTTTGTTTTGAAATaGTCTCAACACTGTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: IELQDSQGYTEKPRLEKLCFVLK*SQHCSP Trigger: TGGGCTACAGTGTTGAGACAATTTCAAAACAAAACA...TAGTTTTTCAAGACGGGGTTTCTCTGTGTAACCCTGGCTGTCCTGGAGCTCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAGCTCCAGGACAGCCAGGGTTACACAGAGAAACCCCGTCTTGAAAAACTAATAATGTACTTCTTTTaGGTGGGAGGAGGATTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: IELQDSQGYTEKPRLEKLIMYFF*VGGGLF Trigger: AAACAATCCTCCTCCCACCAAAAAGAAGTACATTAT...TAGTTTTTCAAGACGGGGTTTCTCTGTGTAACCCTGGCTGTCCTGGAGCTCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGAGGGTTGCTAACCCTCAGCTTCAAAGATGATGTCTTCAGGGTTTGGTGGATAATGTACTTCTTTTaGGTGGGAGGAGGATTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FGGLLTLSFKDDVFRVWWIMYFF*VGGGLF Trigger: AAACAATCCTCCTCCCACCAAAAAGAAGTACATTAT...CCACCAAACCCTGAAGACATCATCTTTGAAGCTGAGGGTTAGCAACCCTCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTATGTATCTGAGGTGGTACCAACAACAGTAGCGGCAGCAGTAGCTATAATAGCCTTTCATTTCTGCTaGAGAAATGGTTCATACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LYVSEVVPTTVAAAVAIIAFHFC*RNGSYL Trigger: CAGGTATGAACCATTTCTCAAGCAGAAATGAAAGGC...TATTATAGCTACTGCTGCCGCTACTGTTGTTGGTACCACCTCAGATACATAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTATGTATCTGAGGTGGTACCAACAACAGTAGCGGCAGCAGTAGCTATAATAAATGAGGACCTTTGTTaGATTTTTAGAATGGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LYVSEVVPTTVAAAVAIINEDLC*IFRMEP Trigger: GGGCTCCATTCTAAAAATCAAACAAAGGTCCTCATT...TATTATAGCTACTGCTGCCGCTACTGTTGTTGGTACCACCTCAGATACATAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR TCA 72 bp | CCGTATAGATCTAGGTTGAGGGCTCTTCTGAGGTACTaGTGCTGTAATAAAATCTCGACTTGTGATGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: PYRSRLRALLRY*CCNKISTCDVH Trigger: ATGAACATCACAAGTCGAGATTTTATTACAGCATCAGTACCTCAGAAGAGCCCTCAACCTAGATCTATACGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAATGATGTGAGGTCTTTCTGTGTTTATAGCATTTTCTTCAAGATAGGTCTCTTTCTTTGGGCAAGCTaGCAGAATCCAGAGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VNDVRSFCVYSIFFKIGLFLWAS*QNPESQ Trigger: CTGACTCTCTGGATTCTGCAAGCTTGCCCAAAGAAA...GAGACCTATCTTGAAGAAAATGCTATAAACACAGAAAGACCTCACATCATTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTATGTATCTGAGGTGGTACCAACAACAGTAGCGGCAGCAGTAGCTATAATATTGTTCAATGCTGTCTaGTACAACAAGTTTGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LYVSEVVPTTVAAAVAIILFNAV*YNKFVF Trigger: GAACACAAACTTGTTGTACAAGACAGCATTGAACAA...TATTATAGCTACTGCTGCCGCTACTGTTGTTGGTACCACCTCAGATACATAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACAATATAAAGGGAGTATaGCCAAACCGTCCAAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNNIKGV*PNRPRH Trigger: GTGTCTTGGACGGTTTGGCAATACTCCCTTTATATT...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR TCA 72 bp | TTAAATGTCTGTGGAATAATAGACTGTCGTCCTGACTaGCTTTATATAGTGGGCTTGAATTGCTCTCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LNVCGIIDCRPD*LYIVGLNCSHF Trigger: AAAGTGAGAGCAATTCAAGCCCACTATATAAAGTCAGTCAGGACGACAGTCTATTATTCCACAGACATTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGATCATATATTAGCCTGTAGTTACATGCCTTCTGATTCCTTTCAGTGTAGATTGGTGGGAGGAGGATaGTTTTGTTTTGAAATTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KDHILACSYMPSDSFQCRLVGGG*FCFEIV Trigger: GACAATTTCAAAACAAAACAATCCTCCTCCCACCAA...TCTACACTGAAAGGAATCAGAAGGCATGTAACTACAGGCTAATATATGATCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR TCA 72 bp | CAGATGAAAATAGTAGCAAGGCCTTTCATTTCTGCTTaGGAAATGGTTCATACCTGCTTTCCCAATATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QMKIVARPFISA*EMVHTCFPNIN Trigger: ATTTATATTGGGAAAGCAGGTATGAACCATTTCTCAAGCAGAAATGAAAGGCCTTGCTACTATTTTCATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR GCA 72 bp | TATACAGATGAAAATAGTAGCAAGGCCTTTCATTTCTaGTTGAGAAATGGTTCATACCTGCTTTCCCAATAT | + |
|
Preference number: 3 (lower is better) Translates to: YTDENSSKAFHF*LRNGSYLLSQY Trigger: ATATTGGGAAAGCAGGTATGAACCATTTCTCAAGCAGAAATGAAAGGCCTTGCTACTATTTTCATCTGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR TCA 72 bp | ATTCTAAGTATTTTCCTGGGCATGTGCTACTCAAAGTaGTGTCAAAAATACTGTTATAGCAGTCTGGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: ILSIFLGMCYSK*CQKYCYSSLVN Trigger: ATTAACCAGACTGCTATAACAGTATTTTTGACATCACTTTGAGTAGCACATGCCCAGGAAAATACTTAGAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
||
| 3UTR CAA 72 bp | CCCAGTCCCCAGTCAGGCCCAGAGCAGATGTACACATaGGAAGGTAAGCCACAGTATGAGCTTCGGCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: PSPQSGPEQMYT*EGKPQYELRLT Trigger: AGTGAGCCGAAGCTCATACTGTGGCTTACCTTCCAATGTGTACATCTGCTCTGGGCCTGACTGGGGACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| CDS-3UTR GCA 90 bp | GTCCTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGCCTGCTTGACTGCATaGTCACTCCCCAGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLGVSSLVVSVLLTPGLPACLTA*SLPSPQ Trigger: CTGGGGACTGGGGAGTGAGCATGCAGTCAAGCAGGC...TGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| 3UTR CAA 72 bp | TGTGGCGGTCACGCCTTCCTCGCTGTCATGGTTCTGTaGATAGTCCTTCAGCCAGGACTGCAAACCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CGGHAFLAVMVL*IVLQPGLQTCK Trigger: TTTACAGGTTTGCAGTCCTGGCTGAAGGACTATCAACAGAACCATGACAGCGAGGAAGGCGTGACCGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGTTTTCGGAGTTCATCTTTGCCTGCTTCTGCTTCTGCTTCAGGAATGAATTTGACCAGGAAGAGGTaGGTGGGCGTGCGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGFRSSSLPASASASGMNLTRKR*VGVRSL Trigger: GAGACTGCGCACGCCCACCCACCTCTTCCTGGTCAA...ATTCATTCCTGAAGCAGAAGCAGAAGCAGGCAAAGATGAACTCCGAAAACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR CAA 72 bp | TGGAGGAGGGCAGAACTCTTCACTGGGAAAAATCTCTaGGAACAGTGTTTCCGCCTGCTTGACTGCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WRRAELFTGKNL*EQCFRLLDCML Trigger: GAGCATGCAGTCAAGCAGGCGGAAACACTGTTCCAAGAGATTTTTCCCAGTGAAGAGTTCTGCCCTCCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| CDS-3UTR TCA 90 bp | ATAGAGCTCCAGGACAGCCAGGGTTACACAGAGAAACCCCGTCTTGAAAAACTAGTCTTCAGGATGGACTaGTCTGTGATGAGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IELQDSQGYTEKPRLEKLVFRMD*SVMSTA Trigger: GGCAGTGCTCATCACAGATCAGTCCATCCTGAAGAC...TAGTTTTTCAAGACGGGGTTTCTCTGTGTAACCCTGGCTGTCCTGGAGCTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR CCA 90 bp | GTCCTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAAACAGAAGTGGTTCCTaGCTCCAGAGGAGGCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLGVSSLVVSVLLTPGLPNRSGS*LQRRHY Trigger: GTAGTGCCTCCTCTGGAGCCAGGAACCACTTCTGTT...TGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR TCA 90 bp | TTACAGCAATCCTCCTGCCTCAGTCTCCTGAATGACAGGATTACACGAGTGAGCCCTCAGCTTCAAAGATaGTGTCTTCAGGGTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQQSSCLSLLNDRITRVSPQLQR*CLQGLV Trigger: CACCAAACCCTGAAGACATCATCTTTGAAGCTGAGG...GCTCACTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR CCA 90 bp | CTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAAAACAGAAGTGGTTCCTaGCTCCAGAGGAGGCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: LGVSSLVVSVLLTPGLPENRSGS*LQRRHY Trigger: GTAGTGCCTCCTCTGGAGCCAGGAACCACTTCTGTT...TTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGATGTACACATTGGAAGGTAAGCCACAGTATGAGCTTCGGCTCACTCCTCATATGCGTGTGTGCTaGAACTCTTCTCAAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQMYTLEGKPQYELRLTPHMRVC*NSSQRG Trigger: GCCTCTTTGAGAAGAGTTCCAGCACACACGCATATG...AGGAGTGAGCCGAAGCTCATACTGTGGCTTACCTTCCAATGTGTACATCTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| 3UTR CAA 72 bp | CAGAGTCTCGGTGTCTTGCACGCTGTCCTCCACATCTaGACTAGCATAACAGAAGACTTCTGTGTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QSLGVLHAVLHI*TSITEDFCVLN Trigger: ATTCAGCACACAGAAGTCTTCTGTTATGCTAGTCAAGATGTGGAGGACAGCGTGCAAGACACCGAGACTCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| CDS-3UTR TCA 90 bp | GTCCTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGATGAGCACTGCCCTTaGGATCTGCTTATATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLGVSSLVVSVLLTPGLPDEHCP*DLLILH Trigger: GTGCAATATAAGCAGATCTCAAGGGCAGTGCTCATC...TGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR TCA 90 bp | CTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAATTCTCTGGCTGTTTTTaGAGAGGAACAGGTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGVSSLVVSVLLTPGLPEFSGCF*RGTGQV Trigger: CACCTGACCTGTTCCTCTTCAAAAACAGCCAGAGAA...TTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR TCA 90 bp | ACTGTCCTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCTCAGCTTCAAAGATaGTGTCTTCAGGGTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVLGVSSLVVSVLLTPGLPQLQR*CLQGLV Trigger: CACCAAACCCTGAAGACATCATCTTTGAAGCTGAGG...CAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAGGACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGTTCTTTGGGCAAGCTTaGAGAATCCAGAGAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVLGVSSLVVSVLLTPGLFFGQA*RIQRVS Trigger: GCTGACTCTCTGGATTCTGCAAGCTTGCCCAAAGAA...CAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAGGACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR GCA 90 bp | CTGATGAAGCTTCGGGCCACAGCTGATGAAAGAACACCGTATAGATCTAGGTTGACCATGCATCACATATaGGTGTGTGCTGGAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LMKLRATADERTPYRSRLTMHHI*VCAGTL Trigger: AAGAGTTCCAGCACACACGCATATGTGATGCATGGT...CAACCTAGATCTATACGGTGTTCTTTCATCAGCTGTGGCCCGAAGCTTCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| CDS-3UTR CCA 90 bp | GTGAATGATGTGAGGTCTTTCTGTGTTTATAGCATTTTCTTCAAGATAGGTCTCATGCAGCTGCCAGGATaGACTCCGGCAAGCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VNDVRSFCVYSIFFKIGLMQLPG*TPASLS Trigger: GGACAGGCTTGCCGGAGTCCATCCTGGCAGCTGCAT...GAGACCTATCTTGAAGAAAATGCTATAAACACAGAAAGACCTCACATCATTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR CCA 90 bp | TTACAGCAATCCTCCTGCCTCAGTCTCCTGAATGACAGGATTACACGAGTGAGCGGCAGAACTCTTCACTaGGAAAAATCTCTTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LQQSSCLSLLNDRITRVSGRTLH*EKSLGT Trigger: TGTTCCAAGAGATTTTTCCCAGTGAAGAGTTCTGCC...GCTCACTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR TCA 90 bp | TTACAGCAATCCTCCTGCCTCAGTCTCCTGAATGACAGGATTACACGAGTGAGCAAGACTTCTGTGTGCTaGATAGTTTCATCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQQSSCLSLLNDRITRVSKTSVC*IVSSFL Trigger: CAAGAAGGATGAAACTATTCAGCACACAGAAGTCTT...GCTCACTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR TCA 90 bp | TGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGGTTGTCTTCAGGATGGACTaGTCTGTGATGAGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CQKIKVLNVVSSICVWRVVFRMD*SVMSTA Trigger: GGCAGTGCTCATCACAGATCAGTCCATCCTGAAGAC...AACCCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR TCA 90 bp | CTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAAACGAACATAATTCCATaGCCCGAACAGAAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGVSSLVVSVLLTPGLPETNIIP*PEQKWF Trigger: GAACCACTTCTGTTCGGGTCATGGAATTATGTTCGT...TTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAAGATCTCCTTGAGTCAACATaGAGAACTCTCTGTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GVSSLVVSVLLTPGLPEDLLEST*RTLCPL Trigger: AAGTGGACAGAGAGTTCTGCATGTTGACTCAAGGAG...ATCTTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR GCA 90 bp | ATTCCTGGAGCCAATTCTGAAACAAAAGAGCCGAGTCACCAACAGAGCTGTTGCCTTCCCTTCCCAAAATaGAAGGATCCTAGTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: IPGANSETKEPSHQQSCCLPFPK*KDPSDI Trigger: AATGTCACTAGGATCCTTGCATTTTGGGAAGGGAAG...GCAACAGCTCTGTTGGTGACTCGGCTCTTTTGTTTCAGAATTGGCTCCAGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR GCA 90 bp | CTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAAGATAGCTGTCCTTCATaGATGTCATGGTTGACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGVSSLVVSVLLTPGLPEDSCPS*MSWLTN Trigger: GTTCGTCAACCATGACATGCATGAAGGACAGCTATC...TTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR GCA 90 bp | ATAGAGCTCCAGGACAGCCAGGGTTACACAGAGAAACCCCGTCTTGAAAAACTATCAGGAATGAATAACTaGTTCACCACAGGTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IELQDSQGYTEKPRLEKLSGMNN*FTTGSK Trigger: CTTGGAACCTGTGGTGAAGCAGTTATTCATTCCTGA...TAGTTTTTCAAGACGGGGTTTCTCTGTGTAACCCTGGCTGTCCTGGAGCTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR GCA 90 bp | GGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAAGATTTCGGAGTTCATCTTTaGCTGCTTCTGCTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GVSSLVVSVLLTPGLPEDFGVHL*LLLLLL Trigger: AAGCAGAAGCAGAAGCAGGCAAAGATGAACTCCGAA...ATCTTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR GCA 90 bp | TTTGGAGGGTTGCTAACCCTCAGCTTCAAAGATGATGTCTTCAGGGTTTGGTGGTCACATATGCGTGTGTaGTGGAACTCTTCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FGGLLTLSFKDDVFRVWWSHMRV*WNSSQR Trigger: TCTTTGAGAAGAGTTCCAGCACACACGCATATGTGA...CCACCAAACCCTGAAGACATCATCTTTGAAGCTGAGGGTTAGCAACCCTCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
||
| CDS-3UTR CCA 90 bp | ATTCCTGGAGCCAATTCTGAAACAAAAGAGCCGAGTCACCAACAGAGCTGTTGCTCTTGCGAAGAGAGATaGCTTCTTCTGTTTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: IPGANSETKEPSHQQSCCSCEER*LLLFHG Trigger: TCCATGAAACAGAAGAAGCCATCTCTCTTCGCAAGA...GCAACAGCTCTGTTGGTGACTCGGCTCTTTTGTTTCAGAATTGGCTCCAGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR CCA 90 bp | ATTCCTGGAGCCAATTCTGAAACAAAAGAGCCGAGTCACCAACAGAGCTGTTGCGTTCCAAGTCTTCTCTaGCTGTTTTTGAAGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IPGANSETKEPSHQQSCCVPSLL*LFLKRN Trigger: GTTCCTCTTCAAAAACAGCCAGAGAAGACTTGGAAC...GCAACAGCTCTGTTGGTGACTCGGCTCTTTTGTTTCAGAATTGGCTCCAGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR TCA 90 bp | GGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAAGATACCTTTATCTTCACCTaGAACTGTGTGCATATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GVSSLVVSVLLTPGLPEDTFIFT*NCVHIR Trigger: ACGGATATGCACACAGTTTCAGGTGAAGATAAAGGT...ATCTTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR GCA 90 bp | GGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAAGATTCAGGAATGAATAACTaGTTCACCACAGGTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVSSLVVSVLLTPGLPEDSGMNN*FTTGSK Trigger: CTTGGAACCTGTGGTGAAGCAGTTATTCATTCCTGA...ATCTTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAAATCTTTGCCTGCTTCTaGTTCTGCTTCAGGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGVSSLVVSVLLTPGLPEIFACF*FCFRNE Trigger: TTCATTCCTGAAGCAGAAGCAGAAGCAGGCAAAGAT...TTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGATCTTTGCCTGCTTCTaGTTCTGCTTCAGGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVLGVSSLVVSVLLTPGLIFACF*FCFRNE Trigger: TTCATTCCTGAAGCAGAAGCAGAAGCAGGCAAAGAT...CAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAGGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR GCA 90 bp | GATTGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGAACAGTGTTTCCGCCTaGTTGACTGCATGCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: DCQKIKVLNVVSSICVWRNSVSA*LTACSL Trigger: GAGTGAGCATGCAGTCAAGCAGGCGGAAACACTGTT...CCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAAGATGTTCCAAGTCTTCTCTaGCTGTTTTTGAAGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVSSLVVSVLLTPGLPEDVPSLL*LFLKRN Trigger: GTTCCTCTTCAAAAACAGCCAGAGAAGACTTGGAAC...ATCTTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGGGCAGAACTCTTCACTaGGAAAAATCTCTTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: TVLGVSSLVVSVLLTPGLGRTLH*EKSLGT Trigger: TGTTCCAAGAGATTTTTCCCAGTGAAGAGTTCTGCC...CAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAGGACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR TCA 90 bp | TGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGGTTGCTTGTAGAGTAAGCTaGCTGCCTTTCTTTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CQKIKVLNVVSSICVWRVACRVS*LPFFGQ Trigger: TTGCCCAAAGAAAGGCAGTCAGCTTACTCTACAAGC...AACCCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR TCA 90 bp | ACTGTCCTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGTTGGCACTTATTCTCTaGCCAAAGGCATCTATGATT | + |
|
Preference number: 4 (lower is better) Translates to: TVLGVSSLVVSVLLTPGLLALIL*PKASMI Trigger: AATCATAGATGCCTTTGGTCAGAGAATAAGTGCCAA...CAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAGGACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR TCA 90 bp | TGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGGTTTTCTCTGGCTGTTTTTaGAGAGGAACAGGTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CQKIKVLNVVSSICVWRVFSGCF*RGTGQV Trigger: CACCTGACCTGTTCCTCTTCAAAAACAGCCAGAGAA...AACCCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR CCA 90 bp | TGTAAAGTTACCTATAATCCCACATTAAGATGTACCACTGTTCCTCCCCAGGAACTGACTGCCTTTCTTTaGGCAAGCTTGCAGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CKVTYNPTLRCTTVPPQELTAFL*ASLQNP Trigger: TGGATTCTGCAAGCTTGCCCAAAGAAAGGCAGTCAG...TTCCTGGGGAGGAACAGTGGTACATCTTAATGTGGGATTATAGGTAACTTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR TCA 90 bp | CAGGATTGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGACGAACATAATTCCATaGCCCGAACAGAAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QDCQKIKVLNVVSSICVWTNIIP*PEQKWF Trigger: GAACCACTTCTGTTCGGGTCATGGAATTATGTTCGT...CCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCAATCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR TCA 90 bp | CAGGATTGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGCTTCTGCTTCAGGAATaGATAACTGCTTCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QDCQKIKVLNVVSSICVWLLLQE*ITASPQ Trigger: CTGTGGTGAAGCAGTTATTCATTCCTGAAGCAGAAG...CCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCAATCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR TCA 90 bp | TGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGGTTGCTTCGGCTCACTCCTaGGGAATCTCTCATATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CQKIKVLNVVSSICVWRVASAHS*GISHIK Trigger: TTTAATATGAGAGATTCCTCAGGAGTGAGCCGAAGC...AACCCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR GCA 90 bp | TGTAAAGTTACCTATAATCCCACATTAAGATGTACCACTGTTCCTCCCCAGGAATCCTTCAGCCAGGACTaGAAACCTGTAAAGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CKVTYNPTLRCTTVPPQESFSQD*KPVKLK Trigger: TTTCAGCTTTACAGGTTTGCAGTCCTGGCTGAAGGA...TTCCTGGGGAGGAACAGTGGTACATCTTAATGTGGGATTATAGGTAACTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGGAGATCTGCTTATATTaGACGTTTGAACATGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLGVSSLVVSVLLTPGLEICLY*TFEHVS Trigger: GGAAACATGTTCAAACGTGCAATATAAGCAGATCTC...CAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAGGACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
||
| CDS-3UTR TCA 90 bp | GTGAATGATGTGAGGTCTTTCTGTGTTTATAGCATTTTCTTCAAGATAGGTCTCGATGAGCACTGCCCTTaGGATCTGCTTATATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VNDVRSFCVYSIFFKIGLDEHCP*DLLILH Trigger: GTGCAATATAAGCAGATCTCAAGGGCAGTGCTCATC...GAGACCTATCTTGAAGAAAATGCTATAAACACAGAAAGACCTCACATCATTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR GCA 90 bp | CTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAATCTTTGGTTGTTCAATaGTGTCTTGTACAACAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGVSSLVVSVLLTPGLPESLVVQ*CLVQQV Trigger: AACTTGTTGTACAAGACAGCATTGAACAACCAAAGA...TTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR GCA 90 bp | GATTGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGAAACTGCACACATCCTaGAGAAACACTGGGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: DCQKIKVLNVVSSICVWRKLHTS*RNTGEF Trigger: AAATTCCCCAGTGTTTCTGCAGGATGTGTGCAGTTT...CCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
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| CDS-3UTR GCA 90 bp | TGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGGTTAAACTGCACACATCCTaGAGAAACACTGGGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: CQKIKVLNVVSSICVWRVKLHTS*RNTGEF Trigger: AAATTCCCCAGTGTTTCTGCAGGATGTGTGCAGTTT...AACCCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
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| CDS-3UTR GCA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACGATAGCTGTCCTTCATaGATGTCATGGTTGACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNDSCPS*MSWLTN Trigger: GTTCGTCAACCATGACATGCATGAAGGACAGCTATC...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR GCA 90 bp | AAAGATCATATATTAGCCTGTAGTTACATGCCTTCTGATTCCTTTCAGTGTAGAAACAGTGTTTCCGCCTaGTTGACTGCATGCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KDHILACSYMPSDSFQCRNSVSA*LTACSL Trigger: GAGTGAGCATGCAGTCAAGCAGGCGGAAACACTGTT...TCTACACTGAAAGGAATCAGAAGGCATGTAACTACAGGCTAATATATGATCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR CCA 90 bp | CTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAAAATCCTATTTCTCTTTaGTTGTTCAATGCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGVSSLVVSVLLTPGLPENPISL*LFNAVL Trigger: CAAGACAGCATTGAACAACCAAAGAGAAATAGGATT...TTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR CCA 90 bp | CTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAATGTAGTATGAAGTGCTaGAGATTAGGTGTTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGVSSLVVSVLLTPGLPECSMKC*RLGVSF Trigger: AAAACTAACACCTAATCTCCAGCACTTCATACTACA...TTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR CCA 90 bp | TGTAAAGTTACCTATAATCCCACATTAAGATGTACCACTGTTCCTCCCCAGGAAAGCAGATGTACACATTaGAAGGTAAGCCACAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: CKVTYNPTLRCTTVPPQESRCTH*KVSHSM Trigger: CATACTGTGGCTTACCTTCCAATGTGTACATCTGCT...TTCCTGGGGAGGAACAGTGGTACATCTTAATGTGGGATTATAGGTAACTTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR CCA 90 bp | TGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGGTTAGCAGATGTACACATTaGAAGGTAAGCCACAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: CQKIKVLNVVSSICVWRVSRCTH*KVSHSM Trigger: CATACTGTGGCTTACCTTCCAATGTGTACATCTGCT...AACCCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
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| CDS-3UTR TCA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACTCCATAGTAACTCCTTaGGTCAACATGCAGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNSIVTP*VNMQNS Trigger: AGAGTTCTGCATGTTGACTCAAGGAGTTACTATGGA...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR TCA 90 bp | CAGGATTGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGTTGGCACTTATTCTCTaGCCAAAGGCATCTATGATT | + |
|
Preference number: 4 (lower is better) Translates to: QDCQKIKVLNVVSSICVWLALIL*PKASMI Trigger: AATCATAGATGCCTTTGGTCAGAGAATAAGTGCCAA...CCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCAATCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
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| CDS-3UTR TCA 90 bp | GTGAATGATGTGAGGTCTTTCTGTGTTTATAGCATTTTCTTCAAGATAGGTCTCCTTCTGCTTCAGGAATaGATAACTGCTTCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VNDVRSFCVYSIFFKIGLLLLQE*ITASPQ Trigger: CTGTGGTGAAGCAGTTATTCATTCCTGAAGCAGAAG...GAGACCTATCTTGAAGAAAATGCTATAAACACAGAAAGACCTCACATCATTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR TCA 90 bp | GTGAATGATGTGAGGTCTTTCTGTGTTTATAGCATTTTCTTCAAGATAGGTCTCGCTTCGGCTCACTCCTaGGGAATCTCTCATATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VNDVRSFCVYSIFFKIGLASAHS*GISHIK Trigger: TTTAATATGAGAGATTCCTCAGGAGTGAGCCGAAGC...GAGACCTATCTTGAAGAAAATGCTATAAACACAGAAAGACCTCACATCATTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR GCA 90 bp | TGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGGTTACTGCCCTTGAGATCTaGTTATATTGCACGTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CQKIKVLNVVSSICVWRVTALEI*LYCTFE Trigger: TTCAAACGTGCAATATAAGCAGATCTCAAGGGCAGT...AACCCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
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| 3UTR CAA 72 bp | CTCTTTGGTTGTTCAATGCTGTCTTGTACAACAAGTTaGTGTTCACCTTTATCTTCACCTGAAACTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFGCSMLSCTTS*CSPLSSPETVC Trigger: GCACACAGTTTCAGGTGAAGATAAAGGTGAACACAAACTTGTTGTACAAGACAGCATTGAACAACCAAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| CDS-3UTR GCA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACGAGTGTAGTATGAAGTaGTGGAGATTAGGTGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNECSMK*WRLGVS Trigger: ACTAACACCTAATCTCCAGCACTTCATACTACACTC...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR GCA 90 bp | GATTGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGGAGATCTGCTTATATTaGACGTTTGAACATGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DCQKIKVLNVVSSICVWREICLY*TFEHVS Trigger: GGAAACATGTTCAAACGTGCAATATAAGCAGATCTC...CCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
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| CDS-3UTR GCA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACACTGCCCTTGAGATCTaGTTATATTGCACGTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNTALEI*LYCTFE Trigger: TTCAAACGTGCAATATAAGCAGATCTCAAGGGCAGT...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR TCA 90 bp | AAAGATCATATATTAGCCTGTAGTTACATGCCTTCTGATTCCTTTCAGTGTAGAAAGGTTTTTGTTGCTTaGAGGCCATCTAATGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KDHILACSYMPSDSFQCRKVFVA*RPSNVV Trigger: CACTACATTAGATGGCCTTCAAGCAACAAAAACCTT...TCTACACTGAAAGGAATCAGAAGGCATGTAACTACAGGCTAATATATGATCTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| 3UTR CAA 72 bp | ACAGATGAAAATAGTAGCAAGGCCTTTCATTTCTGCTaGAGAAATGGTTCATACCTGCTTTCCCAATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TDENSSKAFHFC*RNGSYLLSQYK Trigger: TTTATATTGGGAAAGCAGGTATGAACCATTTCTCAAGCAGAAATGAAAGGCCTTGCTACTATTTTCATCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000209720.2 |
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| 3UTR CAA 72 bp | AGTAATCCTATTTCTCTTTGGTTGTTCAATGCTGTCTaGTACAACAAGTTTGTGTTCACCTTTATCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SNPISLWLFNAV*YNKFVFTFIFT Trigger: GGTGAAGATAAAGGTGAACACAAACTTGTTGTACAAGACAGCATTGAACAACCAAAGAGAAATAGGATTACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| CDS-3UTR CAA 90 bp | CTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGCCAGAATTCATGGATCAGGTCTaGCCATGTGGCGGTCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGVSSLVVSVLLTPGLPEFMDQV*PCGGHA Trigger: GGCGTGACCGCCACATGGCAAGACCTGATCCATGAA...TTCTGGCAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR CAA 90 bp | TTACAGCAATCCTCCTGCCTCAGTCTCCTGAATGACAGGATTACACGAGTGAGCGCTGTCCTCCACATCTaGACTAGCATAACAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LQQSSCLSLLNDRITRVSAVLHI*TSITED Trigger: GTCTTCTGTTATGCTAGTCAAGATGTGGAGGACAGC...GCTCACTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR CAA 90 bp | ACTGTCCTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGGCTGTCATGGTTCTGTaGATAGTCCTTCAGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TVLGVSSLVVSVLLTPGLAVMVL*IVLQPG Trigger: TCCTGGCTGAAGGACTATCAACAGAACCATGACAGC...CAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAGGACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR CAA 90 bp | ATTCCTGGAGCCAATTCTGAAACAAAAGAGCCGAGTCACCAACAGAGCTGTTGCGAGCCCACAAGAGTCTaGGTTTTCGGAGTTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: IPGANSETKEPSHQQSCCEPTRV*VFGVHL Trigger: AAGATGAACTCCGAAAACCAAGACTCTTGTGGGCTC...GCAACAGCTCTGTTGGTGACTCGGCTCTTTTGTTTCAGAATTGGCTCCAGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS GCA 90 bp | TTTCTGCATTTCACCATAGCGGTAAATGTTACCATGCATCACATATaGGTGTGTGCTGGAACTCTTCTCAAAGAGGCTGCCGCTAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: FLHFTIAVNVTMHHI*VCAGTLLKEAAAKP Trigger: GGGTTTAGCGGCAGCCTCTTTGAGAAGAGTTCCAGCACACACGCATATGTGATGCATGGTAACATTTACCGCTATGGTGAAATGCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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| CDS-3UTR CAA 90 bp | TTACAGCAATCCTCCTGCCTCAGTCTCCTGAATGACAGGATTACACGAGTGAGCAATATAAAGGGAGTATaGCCAAACCGTCCAAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: LQQSSCLSLLNDRITRVSNIKGV*PNRPRH Trigger: GTGTCTTGGACGGTTTGGCAATACTCCCTTTATATT...GCTCACTCGTGTAATCCTGTCATTCAGGAGACTGAGGCAGGAGGATTGCTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR CAA 90 bp | ACTGTCCTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGAATATAAAGGGAGTATaGCCAAACCGTCCAAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: TVLGVSSLVVSVLLTPGLNIKGV*PNRPRH Trigger: GTGTCTTGGACGGTTTGGCAATACTCCCTTTATATT...CAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAGGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
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| CDS-3UTR CAA 90 bp | TGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGGTTTTTCTTTGGGCAAGCTaGCAGAATCCAGAGAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CQKIKVLNVVSSICVWRVFLWAS*QNPESQ Trigger: CTGACTCTCTGGATTCTGCAAGCTTGCCCAAAGAAA...AACCCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR CAA 90 bp | GTGAATGATGTGAGGTCTTTCTGTGTTTATAGCATTTTCTTCAAGATAGGTCTCGCTGACTGCCTTTCTTaGGGCAAGCTTGCAGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: VNDVRSFCVYSIFFKIGLADCLS*GKLAES Trigger: GGATTCTGCAAGCTTGCCCAAAGAAAGGCAGTCAGC...GAGACCTATCTTGAAGAAAATGCTATAAACACAGAAAGACCTCACATCATTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR CAA 90 bp | ACTGTCCTTGGGGTGTCTAGCTTAGTGGTGAGTGTATTACTAACTCCAGGATTGGAAGAAAGGTTTTTGTaGCTTGAAGGCCATCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: TVLGVSSLVVSVLLTPGLEERFL*LEGHLM Trigger: CATTAGATGGCCTTCAAGCAACAAAAACCTTTCTTC...CAATCCTGGAGTTAGTAATACACTCACCACTAAGCTAGACACCCCAAGGACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
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| CDS-3UTR CAA 90 bp | TGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGGTTGAGCCCACAAGAGTCTaGGTTTTCGGAGTTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: CQKIKVLNVVSSICVWRVEPTRV*VFGVHL Trigger: AAGATGAACTCCGAAAACCAAGACTCTTGTGGGCTC...AACCCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
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| CDS-3UTR CAA 90 bp | TGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGGTTATAGTTTCATCCTTCTaGCGAAGAGAGATGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CQKIKVLNVVSSICVWRVIVSSF*RREMAS Trigger: AGAAGCCATCTCTCTTCGCAAGAAGGATGAAACTAT...AACCCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
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| CDS-3UTR CAA 90 bp | TGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGGTTGTCAACTACAAGGCATaGTACTTTATGGCGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: CQKIKVLNVVSSICVWRVVNYKA*YFMAKT Trigger: TGTCTTCGCCATAAAGTACAATGCCTTGTAGTTGAC...AACCCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
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| CDS-3UTR CAA 90 bp | CAGGATTGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGGAAGAAAGGTTTTTGTaGCTTGAAGGCCATCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: QDCQKIKVLNVVSSICVWEERFL*LEGHLM Trigger: CATTAGATGGCCTTCAAGCAACAAAAACCTTTCTTC...CCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCAATCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000104984.4 ENSMUST00000210367.2 |
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| CDS-3UTR CAA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACGTCAACTACAAGGCATaGTACTTTATGGCGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNVNYKA*YFMAKT Trigger: TGTCTTCGCCATAAAGTACAATGCCTTGTAGTTGAC...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR CAA 90 bp | GATTGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGAGGTTGTTCAATGCTGTCTaGTACAACAAGTTTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DCQKIKVLNVVSSICVWRLFNAV*YNKFVF Trigger: GAACACAAACTTGTTGTACAAGACAGCATTGAACAA...CCTCCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR CAA 90 bp | TACTTTATAGACGGTGAATGGAAGCTGAAAGTGATTGCTAAGAGATCACACAACCCTATTTCTCTTTGGTaGTTCAATGCTGTCTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: YFIDGEWKLKVIAKRSHNPISLW*FNAVLY Trigger: GTACAAGACAGCATTGAACAACCAAAGAGAAATAGG...GTTGTGTGATCTCTTAGCAATCACTTTCAGCTTCCATTCACCGTCTATAAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS-3UTR CAA 90 bp | CAGGATTGCCAGAAGATTAAGGTTTTGAACGTAGTCAGTTCCATATGTGTTTGGGCTCTCCTTAACCATTaGAGAGTAAGTAATCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: QDCQKIKVLNVVSSICVWALLNH*RVSNPI Trigger: AATAGGATTACTTACTCTCAAATGGTTAAGGAGAGC...CCAAACACATATGGAACTGACTACGTTCAAAACCTTAATCTTCTGGCAATCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104984.4 |
||
| CDS TCA 72 bp | CGAGTAGCAGCGCCAGGCGCTCGTACGCGGTGGGGCTaGAGAGAGGCGCGGGGCTCCGCGTGCCCGCCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RVAAPGARTRWG*REARGSACPPV Trigger: CACCGGCGGGCACGCGGAGCCCCGCGCCTCTCTTCAGCCCCACCGCGTACGAGCGCCTGGCGCTGCTACTCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209720.2 ENSMUST00000211489.2 |
||
| CDS TCA 72 bp | CGAACAGGGATACCAGCAGGTCGCCCAGGCTCAGGTTaGCCAGGAAGAGGTGGGTGGGCGTGCGCAGTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RTGIPAGRPGSG*PGRGGWACAVS Trigger: CGAGACTGCGCACGCCCACCCACCTCTTCCTGGTCAACCTGAGCCTGGGCGACCTGCTGGTATCCCTGTTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209720.2 ENSMUST00000211489.2 |
||
| CDS GCA 72 bp | TTCACCATAGCGGTAAATGTTACCATGCATCACATATaGGTGTGTGCTGGAACTCTTCTCAAAGAGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FTIAVNVTMHHI*VCAGTLLKEAA Trigger: GGCAGCCTCTTTGAGAAGAGTTCCAGCACACACGCATATGTGATGCATGGTAACATTTACCGCTATGGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209720.2 |
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