Pregenerated sensors for CHM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025531Ensembl transcript IDs: ENSMUST00000026607.15, ENSMUST00000113388.3
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATGGAGAGGCAGGGCCAGTACCTGGTGCATTACAGGAGCGTACTTaGCATTTAGTGCATGCCCTAGGTGGGCTTCAGGAAACAACAGCT | + |
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Preference number: 1 (lower is better) Translates to: YGEAGPVPGALQERT*HLVHALGGLQETTA Trigger: AGCTGTTGTTTCCTGAAGCCCACCTAGGGCATGCACTAAATGCCAAGTACGCTCCTGTAATGCACCAGGTACTGGCCCTGCCTCTCCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR CCA 90 bp | GAGAGCTGTACAGCGGGAGGTACAGGCAACCTGAGAGGAACAGCCTaGAAGTCTGGGAAATTTTTCCCATTTTCTCAATCCAACTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: ESCTAGGTGNLRGTA*KSGKFFPFSQSNSF Trigger: GAAGGAGTTGGATTGAGAAAATGGGAAAAATTTCCCAGACTTCCAGGCTGTTCCTCTCAGGTTGCCTGTACCTCCCGCTGTACAGCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR GCA 90 bp | ATTGTATTCCAACTTAACGTCCCCATCCAAGAGAAACTTTCATATTaGTGGTATGGAGAGGCAGGGCCAGTACCTGGTGCATTACAGGAG | + |
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Preference number: 1 (lower is better) Translates to: IVFQLNVPIQEKLSY*WYGEAGPVPGALQE Trigger: CTCCTGTAATGCACCAGGTACTGGCCCTGCCTCTCCATACCAGCAATATGAAAGTTTCTCTTGGATGGGGACGTTAAGTTGGAATACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR TCA 90 bp | CAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTACATTTCTTATaGATCTGTGCTGGGAGCTTTAACATCGCTGAAACCTGGCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: QGSARATFLGFLHFL*ICAGSFNIAETWPG Trigger: ACCTGGCCAGGTTTCAGCGATGTTAAAGCTCCCAGCACAGATTCATAAGAAATGTAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR CCA 90 bp | TCCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTaGCGAACAAATTTCTGTGAACACCACATAATTGTTAACGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: SRCGFQQQQQQKDHN*RTNFCEHHIIVNEA Trigger: TGCTTCGTTAACAATTATGTGGTGTTCACAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR CAA 90 bp | GTATGGAGAGGCAGGGCCAGTACCTGGTGCATTACAGGAGCGTACTaGGCATTTAGTGCATGCCCTAGGTGGGCTTCAGGAAACAACAGC | + |
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Preference number: 2 (lower is better) Translates to: VWRGRASTWCITGAY*AFSACPRWASGNNS Trigger: GCTGTTGTTTCCTGAAGCCCACCTAGGGCATGCACTAAATGCCAAGTACGCTCCTGTAATGCACCAGGTACTGGCCCTGCCTCTCCATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR-3UTR TCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTAACTCTGTTCAGGTCTTaGTGGTTTTGTTGCCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: SIQLLLQGSARATFLGFLTLFRS*WFCCQK Trigger: CTTCTGGCAACAAAACCATCAAGACCTGAACAGAGT...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR-3UTR GCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTAACATGGAGAATTCTGTaGTTTTCCTTGGAGCCATGG | + |
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Preference number: 2 (lower is better) Translates to: SIQLLLQGSARATFLGFLTWRIL*FSLEPW Trigger: CCATGGCTCCAAGGAAAAGCACAGAATTCTCCATGT...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGCTGACTCTCCAGATGTaGCTTTCAACAACAACAACA | + |
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Preference number: 2 (lower is better) Translates to: SVPDLCDIIKRIGYPRGELTLQM*LSTTTT Trigger: TGTTGTTGTTGTTGAAAGCCACATCTGGAGAGTCAG...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGTCCTTTTTGGATTTCTaGAACCTGTTTCTCCTAATT | + |
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Preference number: 2 (lower is better) Translates to: SVPDLCDIIKRIGYPRGESFLDF*NLFLLI Trigger: AATTAGGAGAAACAGGTTCCAGAAATCCAAAAAGGA...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR-3UTR CCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTACTAATCTCACAGGTTTaGTATGTTAAAACAGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: SIQLLLQGSARATFLGFLLISQV*YVKTGK Trigger: CTTACCTGTTTTAACATACCAAACCTGTGAGATTAG...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAACTAATCTCACAGGTTTaGTATGTTAAAACAGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: PDVAFNNNNNKKITIGEQLISQV*YVKTGK Trigger: CTTACCTGTTTTAACATACCAAACCTGTGAGATTAG...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR-3UTR CCA 90 bp | GTTATAGGAGGCATGTTTCACTTCATATCTGGAGAAACTGAAGATAAGTTTAACTCCTTTTTGGATTTCTaGAACCTGTTTCTCCTAATT | + |
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Preference number: 2 (lower is better) Translates to: VIGGMFHFISGETEDKFNSFLDF*NLFLLI Trigger: AATTAGGAGAAACAGGTTCCAGAAATCCAAAAAGGA...GTTAAACTTATCTTCAGTTTCTCCAGATATGAAGTGAAACATGCCTCCTATAAC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR TCA 72 bp | GAGGAGAGAGCTGTACAGCGGGAGGTACAGGCAACCTaGGAGGAACAGCCTGGAAGTCTGGGAAATTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: EERAVQREVQAT*EEQPGSLGNFS Trigger: GGAAAAATTTCCCAGACTTCCAGGCTGTTCCTCTCAGGTTGCCTGTACCTCCCGCTGTACAGCTCTCTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR GCA 72 bp | CAACTTAACGTCCCCATCCAAGAGAAACTTTCATATTaGTGGTATGGAGAGGCAGGGCCAGTACCTGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: QLNVPIQEKLSY*WYGEAGPVPGA Trigger: TGCACCAGGTACTGGCCCTGCCTCTCCATACCAGCAATATGAAAGTTTCTCTTGGATGGGGACGTTAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR CCA 72 bp | ACAGCGGGAGGTACAGGCAACCTGAGAGGAACAGCCTaGAAGTCTGGGAAATTTTTCCCATTTTCTCAATCC | + |
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Preference number: 3 (lower is better) Translates to: TAGGTGNLRGTA*KSGKFFPFSQS Trigger: GGATTGAGAAAATGGGAAAAATTTCCCAGACTTCCAGGCTGTTCCTCTCAGGTTGCCTGTACCTCCCGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR CCA 72 bp | CTTAACGTCCCCATCCAAGAGAAACTTTCATATTGCTaGTATGGAGAGGCAGGGCCAGTACCTGGTGCATTA | + |
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Preference number: 3 (lower is better) Translates to: LNVPIQEKLSYC*YGEAGPVPGAL Trigger: TAATGCACCAGGTACTGGCCCTGCCTCTCCATACCAGCAATATGAAAGTTTCTCTTGGATGGGGACGTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR CCA 72 bp | AGGTACAGGCAACCTGAGAGGAACAGCCTGGAAGTCTaGGAAATTTTTCCCATTTTCTCAATCCAACTCCTT | + |
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Preference number: 3 (lower is better) Translates to: RYRQPERNSLEV*EIFPIFSIQLL Trigger: AAGGAGTTGGATTGAGAAAATGGGAAAAATTTCCCAGACTTCCAGGCTGTTCCTCTCAGGTTGCCTGTACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR TCA 72 bp | GCAAGAGCTACATTCCTTGGATTTTTACATTTCTTATaGATCTGTGCTGGGAGCTTTAACATCGCTGAAACC | + |
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Preference number: 3 (lower is better) Translates to: ARATFLGFLHFL*ICAGSFNIAET Trigger: GGTTTCAGCGATGTTAAAGCTCCCAGCACAGATTCATAAGAAATGTAAAAATCCAAGGAATGTAGCTCTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR TCA 72 bp | TTACAGGTTATTAATTGCTACACTCTGTTCAGGTCTTaGTGGTTTTGTTGCCAGAAGAGGAACGTTAATTTA | + |
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Preference number: 3 (lower is better) Translates to: LQVINCYTLFRS*WFCCQKRNVNL Trigger: TAAATTAACGTTCCTCTTCTGGCAACAAAACCATCAAGACCTGAACAGAGTGTAGCAATTAATAACCTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR TCA 72 bp | TGCAATAAATATAACACTGTGATCATGAGGTTGGTTTaGTATTTTTCCACAGATCAATGTCCAGAAGAACCA | + |
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Preference number: 3 (lower is better) Translates to: CNKYNTVIMRLV*YFSTDQCPEEP Trigger: TGGTTCTTCTGGACATTGATCTGTGGAAAAATATCAAACCAACCTCATGATCACAGTGTTATATTTATTGCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR GCA 72 bp | AAAATAGTTTCTGTGTTGTTCTACAATGTACAGAGCTaGAGTGTCCAAAGGTGTCTAGTTCTTCTAATTATT | + |
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Preference number: 3 (lower is better) Translates to: KIVSVLFYNVQS*SVQRCLVLLII Trigger: AATAATTAGAAGAACTAGACACCTTTGGACACTGCAGCTCTGTACATTGTAGAACAACACAGAAACTATTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| 3UTR CCA 72 bp | GGCTTTCAACAACAACAACAACAAAAAGATCACAATTaGCGAACAAATTTCTGTGAACACCACATAATTGTT | + |
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Preference number: 3 (lower is better) Translates to: GFQQQQQQKDHN*RTNFCEHHIIV Trigger: AACAATTATGTGGTGTTCACAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR GCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGGGCCTCTGCAGCCTCTaGGGCCTCTGTGGCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGEGLCSL*GLCGLC Trigger: GCACAGGCCACAGAGGCCGCAGAGGCTGCAGAGGCC...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR GCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGAGCCTCTGCGGCCTCTaGAGCCTCTGCGGCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGESLCGL*SLCGLC Trigger: ACAGAGGCCGCAGAGGCTGCAGAGGCCGCAGAGGCT...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR GCA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAGGCCTCTGCAGCCTCTaGGGCCTCTGTGGCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: PDVAFNNNNNKKITIGEQGLCSL*GLCGLC Trigger: GCACAGGCCACAGAGGCCGCAGAGGCTGCAGAGGCC...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR GCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGAAGGCAAGCGGCCTCTaGAGCCTCTGTGGCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGEKASGL*SLCGLC Trigger: GCAGAGGCCACAGAGGCTGCAGAGGCCGCTTGCCTT...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR TCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGTCTGGCCCCGTGCACTaGCTTTGTTCTGCAGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGESGPVH*LCSAGS Trigger: ACTACCTGCAGAACAAAGTCAGTGCACGGGGCCAGA...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR GCA 90 bp | TGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATTTCTGAGCCTCTGCGGCCTCTaGAGCCTCTGCGGCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: WLSTTTTTKRSQLANKFLSLCGL*SLCGLC Trigger: ACAGAGGCCGCAGAGGCTGCAGAGGCCGCAGAGGCT...CAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR GCA 90 bp | TGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATTTCTGAAGGCAAGCGGCCTCTaGAGCCTCTGTGGCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: WLSTTTTTKRSQLANKFLKASGL*SLCGLC Trigger: GCAGAGGCCACAGAGGCTGCAGAGGCCGCTTGCCTT...CAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR GCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGAACTCTCTGGCCCCGTaGACTGACTTTGTTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGENSLAP*TDFVLQ Trigger: CTGCAGAACAAAGTCAGTGCACGGGGCCAGAGAGTT...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR CCA 90 bp | TGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATTTCTGCCTCTGCGGCCTCTGTaGCCTGTGCGGACATCACTG | + |
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Preference number: 4 (lower is better) Translates to: WLSTTTTTKRSQLANKFLPLRPL*PVRTSL Trigger: CAGTGATGTCCGCACAGGCCACAGAGGCCGCAGAGG...CAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR TCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTACTGTGCGGACATCACTaGAGCAGGATTTTTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SIQLLLQGSARATFLGFLLCGHH*SRIFLQ Trigger: CTGCAGAAAAATCCTGCTTCAGTGATGTCCGCACAG...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR GCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGCTTCTTGAATCAACATaGAGAACCCTCTGGCCACTC | + |
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Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGELLEST*RTLWPL Trigger: GAGTGGCCAGAGGGTTCTGCATGTTGATTCAAGAAG...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR GCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGACAGAAATGGAGTGTTaGCATACCGCCCAAGACACT | + |
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Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGETEMEC*HTAQDT Trigger: AGTGTCTTGGGCGGTATGGCAACACTCCATTTCTGT...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR TCA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATTCTGGCCCCGTGCACTaGCTTTGTTCTGCAGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNSGPVH*LCSAGS Trigger: ACTACCTGCAGAACAAAGTCAGTGCACGGGGCCAGA...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR TCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTAAACAGCAAAACTTCCTaGCTCTTCTGCTGGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: SIQLLLQGSARATFLGFLNSKTS*LFCWHC Trigger: ACAGTGCCAGCAGAAGAGTCAGGAAGTTTTGCTGTT...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR CCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGAATATCTTCAGGATTTaGTGGGGCTGGACAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGENIFRI*WGWTEV Trigger: GACTTCTGTCCAGCCCCACCAAATCCTGAAGATATT...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR TCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGTCCATAGTAGCTTCTTaGATCAACATGCAGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGESIVAS*INMQNP Trigger: AGGGTTCTGCATGTTGATTCAAGAAGCTACTATGGA...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR TCA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAAACAGCAAAACTTCCTaGCTCTTCTGCTGGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: PDVAFNNNNNKKITIGEQNSKTS*LFCWHC Trigger: ACAGTGCCAGCAGAAGAGTCAGGAAGTTTTGCTGTT...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR GCA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAACTTCTTGAATCAACATaGAGAACCCTCTGGCCACTC | + |
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Preference number: 4 (lower is better) Translates to: PDVAFNNNNNKKITIGEQLLEST*RTLWPL Trigger: GAGTGGCCAGAGGGTTCTGCATGTTGATTCAAGAAG...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR GCA 90 bp | TGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATTTCTGAACTCTCTGGCCCCGTaGACTGACTTTGTTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: WLSTTTTTKRSQLANKFLNSLAP*TDFVLQ Trigger: CTGCAGAACAAAGTCAGTGCACGGGGCCAGAGAGTT...CAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR GCA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAACAGAAATGGAGTGTTaGCATACCGCCCAAGACACT | + |
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Preference number: 4 (lower is better) Translates to: PDVAFNNNNNKKITIGEQTEMEC*HTAQDT Trigger: AGTGTCTTGGGCGGTATGGCAACACTCCATTTCTGT...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR TCA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATCTGTGCGGACATCACTaGAGCAGGATTTTTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNLCGHH*SRIFLQ Trigger: CTGCAGAAAAATCCTGCTTCAGTGATGTCCGCACAG...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR TCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGCTTTTTGCATCACTCTaGGTTTCTTTCTCTCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGELFASL*VSFSPT Trigger: AGTAGGAGAGAAAGAAACTCAGAGTGATGCAAAAAG...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR TCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTATACCGCCCAAGACACTaGAGAAACTTTTTAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SIQLLLQGSARATFLGFLYRPRH*RNFLVA Trigger: AGCTACTAAAAAGTTTCTTCAGTGTCTTGGGCGGTA...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR TCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGAAGAGTCTCTCATATTaGAGTAGAGTGCCCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGEKSLSY*SRVPIE Trigger: TTCTATGGGCACTCTACTTCAATATGAGAGACTCTT...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR GCA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAGAAGCAGGATTTTTCTaGAGTGCACCAGCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PDVAFNNNNNKKITIGEQEAGFF*SAPASS Trigger: TGAAGAAGCTGGTGCACTGCAGAAAAATCCTGCTTC...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR GCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTAATCTGTAATCAGGACTaGCCTGGAAATTTGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SIQLLLQGSARATFLGFLICNQD*PGNLPV Trigger: TACAGGCAAATTTCCAGGGCAGTCCTGATTACAGAT...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGTGTGGAAGTTCTCCTTaGCCATATAAAGGAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGECGSSP*PYKGNR Trigger: TCTGTTTCCTTTATATGGCCAAGGAGAACTTCCACA...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTAACTGTTTCCGCCTGTTaGACTGCATTATCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIQLLLQGSARATFLGFLTVSAC*TALSFP Trigger: AGGAAATGATAATGCAGTCCAACAGGCGGAAACAGT...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR GCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGAGTTCCTTCTCGAAATaGAAGAATCCTCGTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGESSFSK*KNPRNV Trigger: AACATTACGAGGATTCTTGCATTTCGAGAAGGAACT...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026607.15 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATACTGCCCTGGAAATTTaGCTGTACTGTACACCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNTALEI*LYCTPE Trigger: TTCCGGTGTACAGTACAGGCAAATTTCCAGGGCAGT...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR GCA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATCTGTAATCAGGACTaGCCTGGAAATTTGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PDVAFNNNNNKKITIGEQICNQD*PGNLPV Trigger: TACAGGCAAATTTCCAGGGCAGTCCTGATTACAGAT...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTAACATCACTATTTTCCTaGTATTCCTTTAGCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SIQLLLQGSARATFLGFLTSLFS*YSFSQD Trigger: GTCCTGGCTAAAGGAATACCAGGAAAATAGTGATGT...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAACTGTTTCCGCCTGTTaGACTGCATTATCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PDVAFNNNNNKKITIGEQTVSAC*TALSFP Trigger: AGGAAATGATAATGCAGTCCAACAGGCGGAAACAGT...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAATTTGGGCAGATTTTCTaGAAAACTGTTTCCGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PDVAFNNNNNKKITIGEQFGQIF*KTVSAC Trigger: ACAGGCGGAAACAGTTTTCCAGAAAATCTGCCCAAA...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR GCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGTCAAGTATCTGTTCTTaGCACATTGAATTTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGESSICS*HIEFSV Trigger: GACTGAAAATTCAATGTGGCAAGAACAGATACTTGA...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR GCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGAACCTGTTCATTTTCTaGTTCGATTTCTGTATATGG | + |
|
Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGENLFIF*FDFCIW Trigger: CCATATACAGAAATCGAAGCAGAAAATGAACAGGTT...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAATGTGGAAGTTCTCCTTaGCCATATAAAGGAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PDVAFNNNNNKKITIGEQCGSSP*PYKGNR Trigger: TCTGTTTCCTTTATATGGCCAAGGAGAACTTCCACA...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGAGCACACATAGACATTaGACGGTAAATCATTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVPDLCDIIKRIGYPRGESTHRH*TVNHYN Trigger: GTTATAATGATTTACCGTCCAATGTCTATGTGTGCT...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTAACAGAAGTCTTCATTTaGGCAGATTTTCTGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SIQLLLQGSARATFLGFLTEVFI*ADFLEN Trigger: GTTTTCCAGAAAATCTGCCCAAATGAAGACTTCTGT...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATTTCTGAATATCTTCAGGATTTaGTGGGGCTGGACAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WLSTTTTTKRSQLANKFLNIFRI*WGWTEV Trigger: GACTTCTGTCCAGCCCCACCAAATCCTGAAGATATT...CAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR TCA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATTCCATAGTAGCTTCTTaGATCAACATGCAGAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNSIVAS*INMQNP Trigger: AGGGTTCTGCATGTTGATTCAAGAAGCTACTATGGA...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR TCA 90 bp | TGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATTTCTGTACCGCCCAAGACACTaGAGAAACTTTTTAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLSTTTTTKRSQLANKFLYRPRH*RNFLVA Trigger: AGCTACTAAAAAGTTTCTTCAGTGTCTTGGGCGGTA...CAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR GCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTATCAAGTATCTGTTCTTaGCACATTGAATTTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SIQLLLQGSARATFLGFLSSICS*HIEFSV Trigger: GACTGAAAATTCAATGTGGCAAGAACAGATACTTGA...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR GCA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAAATGTACCAAGTATGTaGCTTTCATGCATGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PDVAFNNNNNKKITIGEQNVPSM*LSCMSL Trigger: CAATGACATGCATGAAAGGCACATACTTGGTACATT...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR GCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTAAACCTGTTCATTTTCTaGTTCGATTTCTGTATATGG | + |
|
Preference number: 4 (lower is better) Translates to: SIQLLLQGSARATFLGFLNLFIF*FDFCIW Trigger: CCATATACAGAAATCGAAGCAGAAAATGAACAGGTT...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTAAATTACATTTCTCTTTaGTGTCTCTGTGTTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SIQLLLQGSARATFLGFLNYISL*CLCVVL Trigger: CAAGACAACACAGAGACACCAAAGAGAAATGTAATT...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTAAGCACACATAGACATTaGACGGTAAATCATTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SIQLLLQGSARATFLGFLSTHRH*TVNHYN Trigger: GTTATAATGATTTACCGTCCAATGTCTATGTGTGCT...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATTTTGGGCAGATTTTCTaGAAAACTGTTTCCGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNFGQIF*KTVSAC Trigger: ACAGGCGGAAACAGTTTTCCAGAAAATCTGCCCAAA...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATTTCTGGGACTGTACTTTCCTTaGGAGTTTCTGAGTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WLSTTTTTKRSQLANKFLGLYFP*EFLSWF Trigger: AAACCAACTCAGAAACTCCCAAGGAAAGTACAGTCC...CAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATGGACTGTACTTTCCTTaGGAGTTTCTGAGTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNGLYFP*EFLSWF Trigger: AAACCAACTCAGAAACTCCCAAGGAAAGTACAGTCC...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR TCA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATCTGTTCTTGCCACATTaGATTTTCAGTCACAACATC | + |
|
Preference number: 4 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNLFLPH*IFSHNI Trigger: GATGTTGTGACTGAAAATTCAATGTGGCAAGAACAG...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR TCA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATCTTTTTGCATCACTCTaGGTTTCTTTCTCTCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNLFASL*VSFSPT Trigger: AGTAGGAGAGAAAGAAACTCAGAGTGATGCAAAAAG...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR TCA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATAAGAGCATAACTCAATaGCTCGAACAGCAAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNKSITQ*LEQQNF Trigger: GAAGTTTTGCTGTTCGAGTCATTGAGTTATGCTCTT...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR TCA 90 bp | GTTATAGGAGGCATGTTTCACTTCATATCTGGAGAAACTGAAGATAAGTTTAACAAGAGCATAACTCAATaGCTCGAACAGCAAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VIGGMFHFISGETEDKFNKSITQ*LEQQNF Trigger: GAAGTTTTGCTGTTCGAGTCATTGAGTTATGCTCTT...GTTAAACTTATCTTCAGTTTCTCCAGATATGAAGTGAAACATGCCTCCTATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR TCA 90 bp | GTTATAGGAGGCATGTTTCACTTCATATCTGGAGAAACTGAAGATAAGTTTAACAAGAGTCTCTCATATTaGAGTAGAGTGCCCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VIGGMFHFISGETEDKFNKSLSY*SRVPIE Trigger: TTCTATGGGCACTCTACTTCAATATGAGAGACTCTT...GTTAAACTTATCTTCAGTTTCTCCAGATATGAAGTGAAACATGCCTCCTATAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATACACAGCACACATTCTaGAAAAACACTGTGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNTQHTF*KNTVEV Trigger: AACTTCCACAGTGTTTTTGCAGAATGTGTGCTGTGT...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR GCA 90 bp | GTTATAGGAGGCATGTTTCACTTCATATCTGGAGAAACTGAAGATAAGTTTAACACACAGCACACATTCTaGAAAAACACTGTGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VIGGMFHFISGETEDKFNTQHTF*KNTVEV Trigger: AACTTCCACAGTGTTTTTGCAGAATGTGTGCTGTGT...GTTAAACTTATCTTCAGTTTCTCCAGATATGAAGTGAAACATGCCTCCTATAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATACATCACTATTTTCCTaGTATTCCTTTAGCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNTSLFS*YSFSQD Trigger: GTCCTGGCTAAAGGAATACCAGGAAAATAGTGATGT...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAATGTGCAAATCCTGACTaGCATAACAAAATACTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PDVAFNNNNNKKITIGEQCANPD*HNKILL Trigger: TAGAAGTATTTTGTTATGCCAGTCAGGATTTGCACA...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAAATTACATTTCTCTTTaGTGTCTCTGTGTTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PDVAFNNNNNKKITIGEQNYISL*CLCVVL Trigger: CAAGACAACACAGAGACACCAAAGAGAAATGTAATT...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | GTTATAGGAGGCATGTTTCACTTCATATCTGGAGAAACTGAAGATAAGTTTAACTTGTACTCATCGGGATaGTCTTCATATTCCACACAA | + |
|
Preference number: 4 (lower is better) Translates to: VIGGMFHFISGETEDKFNLYSSG*SSYSTQ Trigger: TTGTGTGGAATATGAAGACCATCCCGATGAGTACAA...GTTAAACTTATCTTCAGTTTCTCCAGATATGAAGTGAAACATGCCTCCTATAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATTTCTGTTGTACTCATCGGGATaGTCTTCATATTCCACACAA | + |
|
Preference number: 4 (lower is better) Translates to: WLSTTTTTKRSQLANKFLLYSSG*SSYSTQ Trigger: TTGTGTGGAATATGAAGACCATCCCGATGAGTACAA...CAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATTTCTGAATGTACCAAGTATGTaGCTTTCATGCATGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: WLSTTTTTKRSQLANKFLNVPSM*LSCMSL Trigger: CAATGACATGCATGAAAGGCACATACTTGGTACATT...CAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATTTCTGACAGAAGTCTTCATTTaGGCAGATTTTCTGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WLSTTTTTKRSQLANKFLTEVFI*ADFLEN Trigger: GTTTTCCAGAAAATCTGCCCAAATGAAGACTTCTGT...CAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| 3UTR CAA 72 bp | GTTTATTTATTTATAGGCAGTTCTAGGTCTAAACTATaGCTCAAGAAAGTAGACCATCAGAGCTTAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VYLFIGSSRSKL*LKKVDHQSLET Trigger: TGTCTCTAAGCTCTGATGGTCTACTTTCTTGAGCAATAGTTTAGACCTAGAACTGCCTATAAATAAATAAAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR CCA 90 bp | GTTATAGGAGGCATGTTTCACTTCATATCTGGAGAAACTGAAGATAAGTTTAACTGTGCAAATCCTGACTaGCATAACAAAATACTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VIGGMFHFISGETEDKFNCANPD*HNKILL Trigger: TAGAAGTATTTTGTTATGCCAGTCAGGATTTGCACA...GTTAAACTTATCTTCAGTTTCTCCAGATATGAAGTGAAACATGCCTCCTATAAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR CCA 90 bp | TGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATTTCTGGGAGTAAACAATTTCTaGACTACTCGTTCTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: WLSTTTTTKRSQLANKFLGVNNF*TTRSKS Trigger: AGATTTAGAACGAGTAGTCCAGAAATTGTTTACTCC...CAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATGGAGTAAACAATTTCTaGACTACTCGTTCTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNGVNNF*TTRSKS Trigger: AGATTTAGAACGAGTAGTCCAGAAATTGTTTACTCC...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS TCA 90 bp | ACTTCAGCATCATTTACTTGTGGTGAACTCTCTGGCCCCGTGCACTaGCTTTGTTCTGCAGGTAGTTCACAGCTCCTCGTGCTTAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TSASFTCGELSGPVH*LCSAGSSQLLVLKD Trigger: GTCCTTAAGCACGAGGAGCTGTGAACTACCTGCAGAACAAAGTCAGTGCACGGGGCCAGAGAGTTCACCACAAGTAAATGATGCTGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS GCA 90 bp | CTCCTACTTCAGCATCATTTACTTGTGGTGAACTCTCTGGCCCCGTaGACTGACTTTGTTCTGCAGGTAGTTCACAGCTCCTCGTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LLLQHHLLVVNSLAP*TDFVLQVVHSSSCL Trigger: TAAGCACGAGGAGCTGTGAACTACCTGCAGAACAAAGTCAGTGCACGGGGCCAGAGAGTTCACCACAAGTAAATGATGCTGAAGTAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTAGACTGCCCTGGAAATTaGCCTGTACTGTACACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SIQLLLQGSARATFLGFLDCPGN*PVLYTG Trigger: TCCGGTGTACAGTACAGGCAAATTTCCAGGGCAGTC...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGCTCCATAGTAGCTTCTaGAATCAACATGCAGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: SVPDLCDIIKRIGYPRGELHSSF*NQHAEP Trigger: GGGTTCTGCATGTTGATTCAAGAAGCTACTATGGAG...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGTTGGGAGTTTCTGAGTaGGTTTCTGGTATGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: SVPDLCDIIKRIGYPRGELGVSE*VSGMTL Trigger: CAGTGTCATACCAGAAACCAACTCAGAAACTCCCAA...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | GTTATAGGAGGCATGTTTCACTTCATATCTGGAGAAACTGAAGATAAGTTTAACGACTGCCCTGGAAATTaGCCTGTACTGTACACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: VIGGMFHFISGETEDKFNDCPGN*PVLYTG Trigger: TCCGGTGTACAGTACAGGCAAATTTCCAGGGCAGTC...GTTAAACTTATCTTCAGTTTCTCCAGATATGAAGTGAAACATGCCTCCTATAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGGTGCCCATAGAATTCTaGGCTTTTCAACCTGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SVPDLCDIIKRIGYPRGEVPIEF*AFQPVH Trigger: ATGAACAGGTTGAAAAGCCAAGAATTCTATGGGCAC...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTAAACTGTTTCCGCCTGTaGGACTGCATTATCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SIQLLLQGSARATFLGFLNCFRL*DCIIIS Trigger: GGAAATGATAATGCAGTCCAACAGGCGGAAACAGTT...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS TCA 90 bp | TATAAAGGAAACAGAAATGGAGTGTTGCCATACCGCCCAAGACACTaGAGAAACTTTTTAGTAGCTTTGAGACCATCTACAGTACTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: YKGNRNGVLPYRPRH*RNFLVALRPSTVLL Trigger: AAGCAGTACTGTAGATGGTCTCAAAGCTACTAAAAAGTTTCTTCAGTGTCTTGGGCGGTATGGCAACACTCCATTTCTGTTTCCTTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGTCTGTTCTTGCCACATaGAATTTTCAGTCACAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SVPDLCDIIKRIGYPRGESVLAT*NFQSQH Trigger: ATGTTGTGACTGAAAATTCAATGTGGCAAGAACAGA...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGGTTCTGTTGAACTTTTaGCATCACTCTGAGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SVPDLCDIIKRIGYPRGEVLLNF*HHSEFL Trigger: AAGAAACTCAGAGTGATGCAAAAAGTTCAACAGAAC...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGCACTTGATTGTTCTGTaGAACTTTTTGCATCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVPDLCDIIKRIGYPRGEHLIVL*NFLHHS Trigger: AGAGTGATGCAAAAAGTTCAACAGAACAATCAAGTG...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR CAA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTATTTGGTGTCTCTGTGTaGTCTTGTACTTTAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SIQLLLQGSARATFLGFLFGVSV*SCTLGK Trigger: TTTGCCTAAAGTACAAGACAACACAGAGACACCAAA...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAACATCTACAGTACTGCTaGTTGTCTCTGATGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: PDVAFNNNNNKKITIGEQHLQYC*LSLMSL Trigger: CAATGACATCAGAGACAACAAGCAGTACTGTAGATG...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TCTGTCCCTGATTTGTGTGACATTATAAAAAGGATTGGATACCCCAGAGGAGAGAACTTTTTAGTAGCTTaGAGACCATCTACAGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: SVPDLCDIIKRIGYPRGENFLVA*RPSTVL Trigger: CAGTACTGTAGATGGTCTCAAAGCTACTAAAAAGTT...CTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TCAATCCAACTCCTTCTTCAAGGGTCAGCAAGAGCTACATTCCTTGGATTTTTAGACAGAAGTCTTCATTaGGGCAGATTTTCTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SIQLLLQGSARATFLGFLDRSLH*GRFSGK Trigger: TTTTCCAGAAAATCTGCCCAAATGAAGACTTCTGTC...TAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | GTTATAGGAGGCATGTTTCACTTCATATCTGGAGAAACTGAAGATAAGTTTAACAACTGTTTCCGCCTGTaGGACTGCATTATCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VIGGMFHFISGETEDKFNNCFRL*DCIIIS Trigger: GGAAATGATAATGCAGTCCAACAGGCGGAAACAGTT...GTTAAACTTATCTTCAGTTTCTCCAGATATGAAGTGAAACATGCCTCCTATAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATTTCTGAGGACTGTACTTTCCTaGGGAGTTTCTGAGTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WLSTTTTTKRSQLANKFLRTVLS*GVSELV Trigger: AACCAACTCAGAAACTCCCAAGGAAAGTACAGTCCT...CAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | CCAGATGTGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAATCTGTTCTTGCCACATaGAATTTTCAGTCACAACAT | + |
|
Preference number: 5 (lower is better) Translates to: PDVAFNNNNNKKITIGEQSVLAT*NFQSQH Trigger: ATGTTGTGACTGAAAATTCAATGTGGCAAGAACAGA...TTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCACATCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATCATCTACAGTACTGCTaGTTGTCTCTGATGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNHLQYC*LSLMSL Trigger: CAATGACATCAGAGACAACAAGCAGTACTGTAGATG...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTTTCAACAACAACAACAACAAAAAGATCACAATTGGCGAACAAATTTCTGGTGCCCATAGAATTCTaGGCTTTTCAACCTGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WLSTTTTTKRSQLANKFLVPIEF*AFQPVH Trigger: ATGAACAGGTTGAAAAGCCAAGAATTCTATGGGCAC...CAGAAATTTGTTCGCCAATTGTGATCTTTTTGTTGTTGTTGTTGTTGAAAGCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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| CDS-3UTR CAA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATGACAGAAGTCTTCATTaGGGCAGATTTTCTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNDRSLH*GRFSGK Trigger: TTTTCCAGAAAATCTGCCCAAATGAAGACTTCTGTC...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS-3UTR CAA 90 bp | TTGAAAGATTTCAAATATTCCTTCTATCAAGAAGACTGTGAAGGCGACAGGAATTGTCTCTGTGTTGTCTaGTACTTTAGGCAAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKDFKYSFYQEDCEGDRNCLCVV*YFRQNF Trigger: GAAATTTTGCCTAAAGTACAAGACAACACAGAGACA...ATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTGAAATCTTTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS TCA 72 bp | TCATTTACTTGTGGTGAACTCTCTGGCCCCGTGCACTaGCTTTGTTCTGCAGGTAGTTCACAGCTCCTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SFTCGELSGPVH*LCSAGSSQLLV Trigger: CACGAGGAGCTGTGAACTACCTGCAGAACAAAGTCAGTGCACGGGGCCAGAGAGTTCACCACAAGTAAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS GCA 72 bp | CAGCATCATTTACTTGTGGTGAACTCTCTGGCCCCGTaGACTGACTTTGTTCTGCAGGTAGTTCACAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QHHLLVVNSLAP*TDFVLQVVHSS Trigger: GGAGCTGTGAACTACCTGCAGAACAAAGTCAGTGCACGGGGCCAGAGAGTTCACCACAAGTAAATGATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS GCA 72 bp | GTGGCCTGTGCGGACATCACTGAAGCAGGATTTTTCTaGAGTGCACCAGCTTCTTCAACATCTTTGTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VACADITEAGFF*SAPASSTSLCK Trigger: TTTGCACAAAGATGTTGAAGAAGCTGGTGCACTGCAGAAAAATCCTGCTTCAGTGATGTCCGCACAGGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS TCA 72 bp | GACTCTTCTGCTGGCACTGTCAAAATGGAGACCTGTTaGTCAGAATCGGGTTTTAGTACTGATCCATCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: DSSAGTVKMETC*SESGFSTDPSV Trigger: TACAGATGGATCAGTACTAAAACCCGATTCTGATCAACAGGTCTCCATTTTGACAGTGCCAGCAGAAGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS GCA 72 bp | TTCTACCATAGTAAGTTGTTTGCTATTGAAGACATCTaGTCTGGAACAGGGGACCTGTTCCACAGTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FYHSKLFAIEDI*SGTGDLFHSSF Trigger: GAAGGAACTGTGGAACAGGTCCCCTGTTCCAGAGCAGATGTCTTCAATAGCAAACAACTTACTATGGTAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026607.15 |
||
| CDS GCA 72 bp | ACTGATCCATCTGTAATCAGGACTGCCCTGGAAATTTaGCTGTACTGTACACCGGAACATGTATTCTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TDPSVIRTALEI*LYCTPEHVFSE Trigger: TTCTGAGAATACATGTTCCGGTGTACAGTACAGGCAAATTTCCAGGGCAGTCCTGATTACAGATGGATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS CAA 90 bp | TCTTCTGAGTCTCCTAGGACTGTACTTTCCTTGGGAGTTTCTGAGTaGGTTTCTGGTATGACACTGGATTCTGAAACTTCTTGTTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSESPRTVLSLGVSE*VSGMTLDSETSCCE Trigger: CTCACAACAAGAAGTTTCAGAATCCAGTGTCATACCAGAAACCAACTCAGAAACTCCCAAGGAAAGTACAGTCCTAGGAGACTCAGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS CCA 72 bp | TTTGGGCAGATTTTCTGGAAAACTGTTTCCGCCTGTTaGACTGCATTATCATTTCCTAGATTACAGTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: FGQIFWKTVSAC*TALSFPRLQSG Trigger: CCCTGACTGTAATCTAGGAAATGATAATGCAGTCCAACAGGCGGAAACAGTTTTCCAGAAAATCTGCCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS CAA 72 bp | TCTCCTAGGACTGTACTTTCCTTGGGAGTTTCTGAGTaGGTTTCTGGTATGACACTGGATTCTGAAACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPRTVLSLGVSE*VSGMTLDSETS Trigger: AGAAGTTTCAGAATCCAGTGTCATACCAGAAACCAACTCAGAAACTCCCAAGGAAAGTACAGTCCTAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS CCA 72 bp | TCCATCAAGAATAATATCTTCAGGATTTGGTGGGGCTaGACAGAAGTCTTCATTTGGGCAGATTTTCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SIKNNIFRIWWG*TEVFIWADFLE Trigger: TTCCAGAAAATCTGCCCAAATGAAGACTTCTGTCCAGCCCCACCAAATCCTGAAGATATTATTCTTGATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS CCA 72 bp | AATGTAGTTTCCTCGTATGCTTTGTACTCATCGGGATaGTCTTCATATTCCACACAAAATGTAAGAAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: NVVSSYALYSSG*SSYSTQNVRNF Trigger: GAAATTTCTTACATTTTGTGTGGAATATGAAGACCATCCCGATGAGTACAAAGCATACGAGGAAACTACATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
||
| CDS CAA 72 bp | TTTAAGTATTCAGAAAATGTAGTTTCCTCGTATGCTTaGTACTCATCGGGATGGTCTTCATATTCCACACAA | + |
|
Preference number: 6 (lower is better) Translates to: FKYSENVVSSYA*YSSGWSSYSTQ Trigger: TTGTGTGGAATATGAAGACCATCCCGATGAGTACAAAGCATACGAGGAAACTACATTTTCTGAATACTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026607.15 ENSMUST00000113388.3 |
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