RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHL1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030077

Ensembl transcript IDs: ENSMUST00000066905.9, ENSMUST00000203830.3, ENSMUST00000203912.3, ENSMUST00000204321.2, ENSMUST00000205098.2

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTTCCTTTATCCACTCTCTGGGCCAAACGTCCAAGTTTCCAAAGTaGAGTGCCAGGGTCTGGGGAGGCATCTTTGAGAAAAGGCCACAG +
Preference number: 1 (lower is better)
Translates to: CSFIHSLGQTSKFPK*SARVWGGIFEKRPQ
Trigger: CTGTGGCCTTTTCTCAAAGATGCCTCCCCAGACCCTGGCACTCCACTTTGGAAACTTGGACGTTTGGCCCAGAGAGTGGATAAAGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
3UTR CCA 90 bp TCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTaGGCCAAACGTCCAAGTTTCCAAAGTGGAGTGCCAGGGTCTGGG +
Preference number: 1 (lower is better)
Translates to: SLLSSQKSFVPLSTL*AKRPSFQSGVPGSG
Trigger: CCCAGACCCTGGCACTCCACTTTGGAAACTTGGACGTTTGGCCCAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
3UTR GCA 90 bp CTTACTGCGAAACCAATTAAGAACAAAGTTGTACACACTAGCAGCTaGCTTATGACTCAGTGGGCATCTTCCAAACAATTATTATTGCCC +
Preference number: 1 (lower is better)
Translates to: LTAKPIKNKVVHTSS*LMTQWASSKQLLLP
Trigger: GGGCAATAATAATTGTTTGGAAGATGCCCACTGAGTCATAAGGCAGCTGCTAGTGTGTACAACTTTGTTCTTAATTGGTTTCGCAGTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR-3UTR CCA 90 bp CCACAGGCACTGGCCTCAGATATCAGGTCTGCTAGGAAGAAAACAGCAATAGATTGGAGTGCCAGGGTCTaGGGAGGCATCTTTGAGAAA +
Preference number: 2 (lower is better)
Translates to: PQALASDIRSARKKTAIDWSARV*GGIFEK
Trigger: TTTCTCAAAGATGCCTCCCCAGACCCTGGCACTCCA...ATCTATTGCTGTTTTCTTCCTAGCAGACCTGATATCTGAGGCCAGTGCCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
3UTR-3UTR CCA 90 bp AAAGTCCATGGACCTTGGCCTGCTTTGCTGAAGAGTTACAACGGAATGAAACCATCTCGAGGATGCCTGTaGGCAAAACATATGCTTCAT +
Preference number: 2 (lower is better)
Translates to: KVHGPWPALLKSYNGMKPSRGCL*AKHMLH
Trigger: ATGAAGCATATGTTTTGCCCACAGGCATCCTCGAGA...TGGTTTCATTCCGTTGTAACTCTTCAGCAAAGCAGGCCAAGGTCCATGGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR-3UTR TCA 90 bp AAAGTCCATGGACCTTGGCCTGCTTTGCTGAAGAGTTACAACGGAATGAAACCATGTACAATGCATTCATaGAATACACTCAAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: KVHGPWPALLKSYNGMKPCTMHS*NTLKGL
Trigger: GAGACCCTTGAGTGTATTTCATGAATGCATTGTACA...TGGTTTCATTCCGTTGTAACTCTTCAGCAAAGCAGGCCAAGGTCCATGGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR-3UTR CCA 90 bp TGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACACTGCTGAAATGGGAACTTTaGATTCAGTCAAAGTGGATC +
Preference number: 2 (lower is better)
Translates to: CASREKPTHLSNINAHTLLKWEL*IQSKWI
Trigger: GATCCACTTTGACTGAATCCAAAGTTCCCATTTCAG...CAGTGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
3UTR-3UTR CCA 90 bp AGGAGAAACAAGGAGCGATTCTTAAGTAGAAGGGCTGGAGATTGTATAATAAATTCCAAGTTTCCAAAGTaGAGTGCCAGGGTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: RRNKERFLSRRAGDCIINSKFPK*SARVWG
Trigger: TCCCCAGACCCTGGCACTCCACTTTGGAAACTTGGA...ATTTATTATACAATCTCCAGCCCTTCTACTTAAGAATCGCTCCTTGTTTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
3UTR-3UTR CCA 90 bp TCTCACTATAGGAACACTAGGGTACATCTACTATCACAGACCACAAACCAGTCCAAAATAAAAAGTCCATaGACCTTGGCCTGCTTTGCT +
Preference number: 2 (lower is better)
Translates to: SHYRNTRVHLLSQTTNQSKIKSP*TLACFA
Trigger: AGCAAAGCAGGCCAAGGTCCATGGACTTTTTATTTT...GGACTGGTTTGTGGTCTGTGATAGTAGATGTACCCTAGTGTTCCTATAGTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR-3UTR GCA 90 bp AAAGTCCATGGACCTTGGCCTGCTTTGCTGAAGAGTTACAACGGAATGAAACCATGTGGGCAAAACATATaGTTCATGTTTATTACTGCA +
Preference number: 2 (lower is better)
Translates to: KVHGPWPALLKSYNGMKPCGQNI*FMFITA
Trigger: TGCAGTAATAAACATGAAGCATATGTTTTGCCCACA...TGGTTTCATTCCGTTGTAACTCTTCAGCAAAGCAGGCCAAGGTCCATGGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR-3UTR CCA 90 bp TCTCACTATAGGAACACTAGGGTACATCTACTATCACAGACCACAAACCAGTCCCTATATAATATGTGCTaGAACCTGGAAGAGAACACA +
Preference number: 2 (lower is better)
Translates to: SHYRNTRVHLLSQTTNQSLYNMC*NLEENT
Trigger: TGTGTTCTCTTCCAGGTTCCAGCACATATTATATAG...GGACTGGTTTGTGGTCTGTGATAGTAGATGTACCCTAGTGTTCCTATAGTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR-3UTR TCA 90 bp ACTTATCTCACTATAGGAACACTAGGGTACATCTACTATCACAGACCACAAACCAATGAAACACAAGTCTaGAGTTCTTGGCATCTGATT +
Preference number: 2 (lower is better)
Translates to: TYLTIGTLGYIYYHRPQTNETQV*SSWHLI
Trigger: AATCAGATGCCAAGAACTTCAGACTTGTGTTTCATT...GGTTTGTGGTCTGTGATAGTAGATGTACCCTAGTGTTCCTATAGTGAGATAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR-3UTR TCA 90 bp CAGTTCTTCAAAACTAAGTATAATTGTGCATCCAGAGAGAAACCCACACATCTTTCGTGTTCTGCATTTTaGGCACCTGAAATCAAAACC +
Preference number: 2 (lower is better)
Translates to: QFFKTKYNCASREKPTHLSCSAF*APEIKT
Trigger: GGTTTTGATTTCAGGTGCTCAAAATGCAGAACACGA...AAGATGTGTGGGTTTCTCTCTGGATGCACAATTATACTTAGTTTTGAAGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
3UTR CAA 90 bp TGTGGGCAAAACATATGCTTCATGTTTATTACTGCATTGGCTCTTTaGCATGTCCACAATTTAAATCCCCAAGTAACACAATGCATTATG +
Preference number: 2 (lower is better)
Translates to: CGQNICFMFITALAL*HVHNLNPQVTQCIM
Trigger: CATAATGCATTGTGTTACTTGGGGATTTAAATTGTGGACATGCAAAAGAGCCAATGCAGTAATAAACATGAAGCATATGTTTTGCCCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR CCA 72 bp GAAAGGGCTGGAGAGCTGCTCACACAGCTGGACTTCTaGATCCTTACACTCACACCCGCTTTCATTTGGTAC +
Preference number: 3 (lower is better)
Translates to: ERAGELLTQLDF*ILTLTPAFIWY
Trigger: GTACCAAATGAAAGCGGGTGTGAGTGTAAGGATCCAGAAGTCCAGCTGTGTGAGCAGCTCTCCAGCCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR CCA 72 bp CAAACGTCCAAGTTTCCAAAGTGGAGTGCCAGGGTCTaGGGAGGCATCTTTGAGAAAAGGCCACAGGGCAAA +
Preference number: 3 (lower is better)
Translates to: QTSKFPKWSARV*GGIFEKRPQGK
Trigger: TTTGCCCTGTGGCCTTTTCTCAAAGATGCCTCCCCAGACCCTGGCACTCCACTTTGGAAACTTGGACGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
3UTR-3UTR CAA 90 bp GAAACATCTATGAGGAGAAACAAGGAGCGATTCTTAAGTAGAAGGGCTGGAGATTCTGGGGAGGCATCTTaGAGAAAAGGCCACAGGGCA +
Preference number: 3 (lower is better)
Translates to: ETSMRRNKERFLSRRAGDSGEAS*RKGHRA
Trigger: TGCCCTGTGGCCTTTTCTCAAAGATGCCTCCCCAGA...ATCTCCAGCCCTTCTACTTAAGAATCGCTCCTTGTTTCTCCTCATAGATGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
3UTR GCA 72 bp AAAATAGCACACAGTGATGGATTTTCCAGAAATCTGTaGCCTGGTCATCAGAAAGGGCTGGAGAGCTGCTCA +
Preference number: 3 (lower is better)
Translates to: KIAHSDGFSRNL*PGHQKGLESCS
Trigger: TGAGCAGCTCTCCAGCCCTTTCTGATGACCAGGGCACAGATTTCTGGAAAATCCATCACTGTGTGCTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR TCA 72 bp CAGCACTACAGGTCCTCCCATAAAAATAGCACACAGTaGTGGATTTTCCAGAAATCTGTGCCCTGGTCATCA +
Preference number: 3 (lower is better)
Translates to: QHYRSSHKNSTQ*WIFQKSVPWSS
Trigger: TGATGACCAGGGCACAGATTTCTGGAAAATCCATCACTGTGTGCTATTTTTATGGGAGGACCTGTAGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR CCA 72 bp GTTATGATCTCTGTTTACCAAACTGTCCACAGGCACTaGCCTCAGATATCAGGTCTGCTAGGAAGAAAACAG +
Preference number: 3 (lower is better)
Translates to: VMISVYQTVHRH*PQISGLLGRKQ
Trigger: CTGTTTTCTTCCTAGCAGACCTGATATCTGAGGCCAGTGCCTGTGGACAGTTTGGTAAACAGAGATCATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
3UTR GCA 72 bp TTCCAAACAATTATTATTGCCCATTGTAGTCAGCATTaGACGTCAGAGTCTGCCACCCATTGTTTGAGACAG +
Preference number: 3 (lower is better)
Translates to: FQTIIIAHCSQH*TSESATHCLRQ
Trigger: CTGTCTCAAACAATGGGTGGCAGACTCTGACGTGCAATGCTGACTACAATGGGCAATAATAATTGTTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR CCA 72 bp AGCATCGTGCCTATGGTTTCTCTATATAATATGTGCTaGAACCTGGAAGAGAACACAGATTTTCCTGACCCT +
Preference number: 3 (lower is better)
Translates to: SIVPMVSLYNMC*NLEENTDFPDP
Trigger: AGGGTCAGGAAAATCTGTGTTCTCTTCCAGGTTCCAGCACATATTATATAGAGAAACCATAGGCACGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR GCA 72 bp CTATGCATTCTCGAGGATGCCTGTGGGCAAAACATATaGTTCATGTTTATTACTGCATTGGCTCTTTTGCAT +
Preference number: 3 (lower is better)
Translates to: LCILEDACGQNI*FMFITALALLH
Trigger: ATGCAAAAGAGCCAATGCAGTAATAAACATGAAGCATATGTTTTGCCCACAGGCATCCTCGAGAATGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR GCA 72 bp TTCAGCATCGTGCCTATGGTTTCTCTATATAATATGTaGTGGAACCTGGAAGAGAACACAGATTTTCCTGAC +
Preference number: 3 (lower is better)
Translates to: FSIVPMVSLYNM*WNLEENTDFPD
Trigger: GTCAGGAAAATCTGTGTTCTCTTCCAGGTTCCAGCACATATTATATAGAGAAACCATAGGCACGATGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR TCA 72 bp GTCAGCATTGCACGTCAGAGTCTGCCACCCATTGTTTaGGACAGTAAAAGAATAAAATCCACTTTAACCAAT +
Preference number: 3 (lower is better)
Translates to: VSIARQSLPPIV*DSKRIKSTLTN
Trigger: ATTGGTTAAAGTGGATTTTATTCTTTTACTGTCTCAAACAATGGGTGGCAGACTCTGACGTGCAATGCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR CCA 72 bp AAGATTTTCCTGCCTATGCATTCTCGAGGATGCCTGTaGGCAAAACATATGCTTCATGTTTATTACTGCATT +
Preference number: 3 (lower is better)
Translates to: KIFLPMHSRGCL*AKHMLHVYYCI
Trigger: AATGCAGTAATAAACATGAAGCATATGTTTTGCCCACAGGCATCCTCGAGAATGCATAGGCAGGAAAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR CCA 72 bp AAAGTTGTACACACTAGCAGCTGCCTTATGACTCAGTaGGCATCTTCCAAACAATTATTATTGCCCATTGTA +
Preference number: 3 (lower is better)
Translates to: KVVHTSSCLMTQ*ASSKQLLLPIV
Trigger: TACAATGGGCAATAATAATTGTTTGGAAGATGCCCACTGAGTCATAAGGCAGCTGCTAGTGTGTACAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR GCA 72 bp TGCCTGTGGGCAAAACATATGCTTCATGTTTATTACTaGATTGGCTCTTTTGCATGTCCACAATTTAAATCC +
Preference number: 3 (lower is better)
Translates to: CLWAKHMLHVYY*IGSFACPQFKS
Trigger: GGATTTAAATTGTGGACATGCAAAAGAGCCAATGCAGTAATAAACATGAAGCATATGTTTTGCCCACAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR GCA 72 bp AAACCAATTAAGAACAAAGTTGTACACACTAGCAGCTaGCTTATGACTCAGTGGGCATCTTCCAAACAATTA +
Preference number: 3 (lower is better)
Translates to: KPIKNKVVHTSS*LMTQWASSKQL
Trigger: TAATTGTTTGGAAGATGCCCACTGAGTCATAAGGCAGCTGCTAGTGTGTACAACTTTGTTCTTAATTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR TCA 72 bp ACTACCACTCCCTTTGCAGCTCCAGTTAGTTCAAGTTaGAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA +
Preference number: 3 (lower is better)
Translates to: TTTPFAAPVSSS*KKKERKKERKK
Trigger: TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCAACTTGAACTAACTGGAGCTGCAAAGGGAGTGGTAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
3UTR GCA 72 bp TCTATAATTAAAATAAAAAGTCCATGGACCTTGGCCTaGTTTGCTGAAGAGTTACAACGGAATGAAACCAAA +
Preference number: 3 (lower is better)
Translates to: SIIKIKSPWTLA*FAEELQRNETK
Trigger: TTTGGTTTCATTCCGTTGTAACTCTTCAGCAAAGCAGGCCAAGGTCCATGGACTTTTTATTTTAATTATAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR TCA 90 bp CACACTGAACAGGAGAGCCAGGTAGATGTGGAGTATCTGAAATGGGAACTTTGGCTTTCCACAGCCTCTTaGGGTGCACGCCCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: HTEQESQVDVEYLKWELWLSTAS*GARPQV
Trigger: TACCTGAGGGCGTGCACCTCAAGAGGCTGTGGAAAG...CCAAAGTTCCCATTTCAGATACTCCACATCTACCTGGCTCTCCTGTTCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTCTTCGGGGGCTCCCTaGGGCTTCCAGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: FFHQNCRISTSGHAFPLLSSGAP*GFQLTL
Trigger: CAAAGTGAGCTGGAAGCCCCAGGGAGCCCCCGAAGA...CAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp AGTGGTTATGATCTCTGTTTACCAAACTGTCCACAGGCACTGGCCTCAGATATCAGTTTCATGATGGTCTaGAGGCAGGCTGGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SGYDLCLPNCPQALASDISFMMV*RQAGVA
Trigger: AGCCACGCCAGCCTGCCTTCAGACCATCATGAAACT...GATATCTGAGGCCAGTGCCTGTGGACAGTTTGGTAAACAGAGATCATAACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp CTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGCTTCCCAGACCACGGTaGCCTTGGGAGAAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LSSKLQNINLWTRVSAPVLPRPR*PWEKQS
Trigger: ACTTTGCTTCTCCCAAGGCCACCGTGGTCTGGGAAG...CACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp AGTGGTTATGATCTCTGTTTACCAAACTGTCCACAGGCACTGGCCTCAGATATCCTTCCCAGACCACGGTaGCCTTGGGAGAAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SGYDLCLPNCPQALASDILPRPR*PWEKQS
Trigger: ACTTTGCTTCTCCCAAGGCCACCGTGGTCTGGGAAG...GATATCTGAGGCCAGTGCCTGTGGACAGTTTGGTAAACAGAGATCATAACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTCTTCGGGGGCTCCCTaGGGCTTCCAGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRSSGAP*GFQLTL
Trigger: CAAAGTGAGCTGGAAGCCCCAGGGAGCCCCCGAAGA...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp TCTCACTATAGGAACACTAGGGTACATCTACTATCACAGACCACAAACCAGTCCAGTTTCATGATGGTCTaGAGGCAGGCTGGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SHYRNTRVHLLSQTTNQSSFMMV*RQAGVA
Trigger: AGCCACGCCAGCCTGCCTTCAGACCATCATGAAACT...GGACTGGTTTGTGGTCTGTGATAGTAGATGTACCCTAGTGTTCCTATAGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR TCA 90 bp TTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAGTTTCATGATGGTCTaGAGGCAGGCTGGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: FIKIAEYQPLDTRFRSCVSFMMV*RQAGVA
Trigger: AGCCACGCCAGCCTGCCTTCAGACCATCATGAAACT...TACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp CAGAGAAAAACGGAAGGAAAAGCTAATAGGGTGAACCTGCTCCCATTACCTTTTCTTTCCACAGCCTCTTaGGGTGCACGCCCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: QRKTEGKANRVNLLPLPFLSTAS*GARPQV
Trigger: TACCTGAGGGCGTGCACCTCAAGAGGCTGTGGAAAG...AAAAGGTAATGGGAGCAGGTTCACCCTATTAGCTTTTCCTTCCGTTTTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR TCA 90 bp ATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAACTTTCCACAGCCTCTTaGGGTGCACGCCCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: IKIAEYQPLDTRFRSCVKLSTAS*GARPQV
Trigger: TACCTGAGGGCGTGCACCTCAAGAGGCTGTGGAAAG...TTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp ATTGACATTCTAAGGAATGGCAGTTTCAGTTCAGCTCCTCACTCCTTTCATCACCTTTCCACAGCCTCTTaGGGTGCACGCCCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: IDILRNGSFSSAPHSFHHLSTAS*GARPQV
Trigger: TACCTGAGGGCGTGCACCTCAAGAGGCTGTGGAAAG...GTGATGAAAGGAGTGAGGAGCTGAACTGAAACTGCCATTCCTTAGAATGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR GCA 90 bp ATTGACATTCTAAGGAATGGCAGTTTCAGTTCAGCTCCTCACTCCTTTCATCACGTTGTGGTCATCTCCTaGTTCCCAGGACAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: IDILRNGSFSSAPHSFHHVVVIS*FPGQPD
Trigger: GTCCGGCTGTCCTGGGAAGCAGGAGATGACCACAAC...GTGATGAAAGGAGTGAGGAGCTGAACTGAAACTGCCATTCCTTAGAATGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp GCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCTTCGGGGGCTCCCTaGGGCTTCCAGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: AVLFLSSKLQNINLWTRVSSGAP*GFQLTL
Trigger: CAAAGTGAGCTGGAAGCCCCAGGGAGCCCCCGAAGA...AACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp CCACAGGCACTGGCCTCAGATATCAGGTCTGCTAGGAAGAAAACAGCAATAGATGCCAGAATGGTTCCGTaGATATTTGAGGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: PQALASDIRSARKKTAIDARMVP*IFEASH
Trigger: GTGTGAAGCCTCAAATATTCACGGAACCATTCTGGC...ATCTATTGCTGTTTTCTTCCTAGCAGACCTGATATCTGAGGCCAGTGCCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp CTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGAGGATAGTCTTCCCCTaGATAGAGTGTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSSKLQNINLWTRVSAPVRIVFP*IECHWL
Trigger: CAGCCAGTGACACTCTATTCAGGGGAAGACTATCCT...CACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR GCA 90 bp TATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCGTTGTGGTCATCTCCTaGTTCCCAGGACAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: YFFHQNCRISTSGHAFPLVVVIS*FPGQPD
Trigger: GTCCGGCTGTCCTGGGAAGCAGGAGATGACCACAAC...GAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp GGTTATGATCTCTGTTTACCAAACTGTCCACAGGCACTGGCCTCAGATATCAGGATAGATGTGCAAAGGTaGGAGGCCTTTTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: GYDLCLPNCPQALASDIRIDVQR*EAFWRV
Trigger: AACCCTCCAAAAGGCCTCCCACCTTTGCACATCTAT...CCTGATATCTGAGGCCAGTGCCTGTGGACAGTTTGGTAAACAGAGATCATAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp CCACAGGCACTGGCCTCAGATATCAGGTCTGCTAGGAAGAAAACAGCAATAGATTCTGTTTCTTCTCCCTaGACTCTAGTTAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PQALASDIRSARKKTAIDSVSSP*TLVSSS
Trigger: GGAGGAGCTAACTAGAGTCCAGGGAGAAGAAACAGA...ATCTATTGCTGTTTTCTTCCTAGCAGACCTGATATCTGAGGCCAGTGCCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp AATTGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACAGAAGGCAGGCTGGCGTaGCTTCTTCCGACTTCGTTT +
Preference number: 4 (lower is better)
Translates to: NCASREKPTHLSNINAHTEGRLA*LLPTSF
Trigger: AAACGAAGTCGGAAGAAGCCACGCCAGCCTGCCTTC...TGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CCA 90 bp CTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGCTTGTCTGGAGCTGCTaGTGGAGTTTCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: LSSKLQNINLWTRVSAPVLVWSC*WSFMMV
Trigger: GACCATCATGAAACTCCACCAGCAGCTCCAGACAAG...CACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp TTTAAGAAGAAGAGAAGTGGTTATGATCTCTGTTTACCAAACTGTCCACAGGCATCTTCGGGGGCTCCCTaGGGCTTCCAGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: FKKKRSGYDLCLPNCPQASSGAP*GFQLTL
Trigger: CAAAGTGAGCTGGAAGCCCCAGGGAGCCCCCGAAGA...TGCCTGTGGACAGTTTGGTAAACAGAGATCATAACCACTTCTCTTCTTCTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp GGTTATGATCTCTGTTTACCAAACTGTCCACAGGCACTGGCCTCAGATATCAGGCTGGACCAGCTCCTTTaGAGTTATAGGCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: GYDLCLPNCPQALASDIRLDQLL*SYRLRL
Trigger: CAGTCTTAGCCTATAACTCCAAAGGAGCTGGTCCAG...CCTGATATCTGAGGCCAGTGCCTGTGGACAGTTTGGTAAACAGAGATCATAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp TGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACACTGATAAGGCTCGCTCTCTaGACCAGCTCCTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: CASREKPTHLSNINAHTLIRLAL*TSSFGV
Trigger: AACTCCAAAGGAGCTGGTCCAGAGAGCGAGCCTTAT...CAGTGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp CCACAGGCACTGGCCTCAGATATCAGGTCTGCTAGGAAGAAAACAGCAATAGATACTGTGTTTCAAATGTaGGTCACACTGGCTTTCGCA +
Preference number: 4 (lower is better)
Translates to: PQALASDIRSARKKTAIDTVFQM*VTLAFA
Trigger: TGCGAAAGCCAGTGTGACTCACATTTGAAACACAGT...ATCTATTGCTGTTTTCTTCCTAGCAGACCTGATATCTGAGGCCAGTGCCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR GCA 90 bp CAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAGGGGCCTTTTGGAGGGTTaGAGGGTAAGACAATGGAAT +
Preference number: 4 (lower is better)
Translates to: QNCRISTSGHAFPLLCKRGLLEG*RVRQWN
Trigger: ATTCCATTGTCTTACCCTGCAACCCTCCAAAAGGCC...CCTTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp TCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGGGCCAAACGTCCAAGTTTCAGAAAGTGCGCCCTCTaGTGGAACTCCAACTCAACA +
Preference number: 4 (lower is better)
Translates to: SQKSFVPLSTLWAKRPSFRKCAL*WNSNST
Trigger: TGTTGAGTTGGAGTTCCAGCAGAGGGCGCACTTTCT...GAAACTTGGACGTTTGGCCCAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp CTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTGTCAGCACTCTCTGTaGGCTGCATGTTCCTATTCA +
Preference number: 4 (lower is better)
Translates to: LSSKLQNINLWTRVSAPVCQHSL*AACSYS
Trigger: TGAATAGGAACATGCAGCCCACAGAGAGTGCTGACA...CACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp TTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTACATTTGATTGTGGGTTaGGGTTCGCCTTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: FIKIAEYQPLDTRFRSCVHLIVG*GSPSAS
Trigger: TGAAGCAGAAGGCGAACCTCAACCCACAATCAAATG...TACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp ATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCAGGATAGTCTTCCCCTaGATAGAGTGTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: ISFIKIAEYQPLDTRFRSRIVFP*IECHWL
Trigger: CAGCCAGTGACACTCTATTCAGGGGAAGACTATCCT...GGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp TTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGACCGAAGGCTTCCCTTaGGAGGTTTTTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: FFHQNCRISTSGHAFPLLTEGFP*EVFHHC
Trigger: ACAGTGATGAAAAACCTCTCAAGGGAAGCCTTCGGT...CAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR GCA 90 bp CAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGAAGGGAAAGGCCACCTaGACGTATGACTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: QLLTPFITEVFCSFIHSLKGKAT*TYDCFT
Trigger: TGTAAAGCAGTCATACGTGCAGGTGGCCTTTCCCTT...CAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR GCA 90 bp CTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGATTCACTACCTGGTTTaGTCCACTGGATATGTGGAG +
Preference number: 4 (lower is better)
Translates to: LSSKLQNINLWTRVSAPVIHYLV*STGYVE
Trigger: CTCCACATATCCAGTGGAGCAAACCAGGTAGTGAAT...CACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp TTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTTGAGGTTCGCCTTCTaGTTCACACAACAAGATGCC +
Preference number: 4 (lower is better)
Translates to: FFHQNCRISTSGHAFPLLLRFAF*FTQQDA
Trigger: GGCATCTTGTTGTGTGAAGCAGAAGGCGAACCTCAA...CAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp TCTTTTGTTCCTTTATCCACTCTCTGGGCCAAACGTCCAAGTTTCCAAAGTGGATTGAGGTTCGCCTTCTaGTTCACACAACAAGATGCC +
Preference number: 4 (lower is better)
Translates to: SFVPLSTLWAKRPSFQSGLRFAF*FTQQDA
Trigger: GGCATCTTGTTGTGTGAAGCAGAAGGCGAACCTCAA...TCCACTTTGGAAACTTGGACGTTTGGCCCAGAGAGTGGATAAAGGAACAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR GCA 90 bp CAGTTCTTCAAAACTAAGTATAATTGTGCATCCAGAGAGAAACCCACACATCTTGTTGTGGTCATCTCCTaGTTCCCAGGACAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: QFFKTKYNCASREKPTHLVVVIS*FPGQPD
Trigger: GTCCGGCTGTCCTGGGAAGCAGGAGATGACCACAAC...AAGATGTGTGGGTTTCTCTCTGGATGCACAATTATACTTAGTTTTGAAGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CCA 90 bp ATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCCCTGGTTTGCTCCACTaGATATGTGGAGTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ISFIKIAEYQPLDTRFRSPGLLH*ICGVGR
Trigger: CCTACCAACTCCACATATCCAGTGGAGCAAACCAGG...GGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTCCTGGTTTGCTCCACTaGATATGTGGAGTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRPGLLH*ICGVGR
Trigger: CCTACCAACTCCACATATCCAGTGGAGCAAACCAGG...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp ATTGACATTCTAAGGAATGGCAGTTTCAGTTCAGCTCCTCACTCCTTTCATCACCCTGGTTTGCTCCACTaGATATGTGGAGTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: IDILRNGSFSSAPHSFHHPGLLH*ICGVGR
Trigger: CCTACCAACTCCACATATCCAGTGGAGCAAACCAGG...GTGATGAAAGGAGTGAGGAGCTGAACTGAAACTGCCATTCCTTAGAATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp TCTTTTGTTCCTTTATCCACTCTCTGGGCCAAACGTCCAAGTTTCCAAAGTGGACTTCTTTTTCCAGCGTaGAGGCTCTTCTACTGTGAC +
Preference number: 4 (lower is better)
Translates to: SFVPLSTLWAKRPSFQSGLLFPA*RLFYCD
Trigger: GTCACAGTAGAAGAGCCTCCACGCTGGAAAAAGAAG...TCCACTTTGGAAACTTGGACGTTTGGCCCAGAGAGTGGATAAAGGAACAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp AAAGTCCATGGACCTTGGCCTGCTTTGCTGAAGAGTTACAACGGAATGAAACCACGTCAATATTGGCATTaGCCAGAATGGTTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: KVHGPWPALLKSYNGMKPRQYWH*PEWFRE
Trigger: TTCACGGAACCATTCTGGCCAATGCCAATATTGACG...TGGTTTCATTCCGTTGTAACTCTTCAGCAAAGCAGGCCAAGGTCCATGGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CCA 90 bp CAGAGAAAAACGGAAGGAAAAGCTAATAGGGTGAACCTGCTCCCATTACCTTTTCAAGTGAAGGTTTCCTaGCGGATCTGGAACACCAAG +
Preference number: 4 (lower is better)
Translates to: QRKTEGKANRVNLLPLPFQVKVS*RIWNTK
Trigger: CTTGGTGTTCCAGATCCGCCAGGAAACCTTCACTTG...AAAAGGTAATGGGAGCAGGTTCACCCTATTAGCTTTTCCTTCCGTTTTTCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CCA 90 bp GTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTCAAGTGAAGGTTTCCTaGCGGATCTGGAACACCAAG +
Preference number: 4 (lower is better)
Translates to: VQLLTPFITEVFCSFIHSQVKVS*RIWNTK
Trigger: CTTGGTGTTCCAGATCCGCCAGGAAACCTTCACTTG...AGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp ATTGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACACCTGATTTTGCTGTTGTaGTCATCTCCTGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: IVHPERNPHILATSMHTHLILLL*SSPASQ
Trigger: CTGGGAAGCAGGAGATGACCACAACAGCAAAATCAG...GTGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CCA 90 bp GAAAGAGAGCCAACATCCCTTTTAAGAAGAAGAGAAGTGGTTATGATCTCTGTTGAAGGCAGGCTGGCGTaGCTTCTTCCGACTTCGTTT +
Preference number: 4 (lower is better)
Translates to: EREPTSLLRRREVVMISVEGRLA*LLPTSF
Trigger: AAACGAAGTCGGAAGAAGCCACGCCAGCCTGCCTTC...AACAGAGATCATAACCACTTCTCTTCTTCTTAAAAGGGATGTTGGCTCTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp ATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCATAAGGCTCGCTCTCTaGACCAGCTCCTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: ISFIKIAEYQPLDTRFRSIRLAL*TSSFGV
Trigger: AACTCCAAAGGAGCTGGTCCAGAGAGCGAGCCTTAT...GGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TCAGTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACATAAGGCTCGCTCTCTaGACCAGCTCCTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: SVQLLTPFITEVFCSFIHIRLAL*TSSFGV
Trigger: AACTCCAAAGGAGCTGGTCCAGAGAGCGAGCCTTAT...GTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp CAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGTCCCTTCTCCTAGGGTaGCACCTTCTTCACTTATTG +
Preference number: 4 (lower is better)
Translates to: QLLTPFITEVFCSFIHSLSLLLG*HLLHLL
Trigger: CAATAAGTGAAGAAGGTGCCACCCTAGGAGAAGGGA...CAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
3UTR CAA 72 bp AGTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTaGTTCCTTTATCCACTCTCTGGGCCAAACGTCCAA +
Preference number: 4 (lower is better)
Translates to: SSAPHSFHHRSL*FLYPLSGPNVQ
Trigger: TTGGACGTTTGGCCCAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp AAAGTCCATGGACCTTGGCCTGCTTTGCTGAAGAGTTACAACGGAATGAAACCAATTGTTGGAACCTGTTaGACGGAGAGTGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: KVHGPWPALLKSYNGMKPIVGTC*TESGIS
Trigger: TGAAATACCACTCTCCGTTCAACAGGTTCCAACAAT...TGGTTTCATTCCGTTGTAACTCTTCAGCAAAGCAGGCCAAGGTCCATGGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR TCA 90 bp ATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAGCCAGAATGGTTCCGTaGATATTTGAGGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: IKIAEYQPLDTRFRSCVKARMVP*IFEASH
Trigger: GTGTGAAGCCTCAAATATTCACGGAACCATTCTGGC...TTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp CAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAGGTCTGTTTTGTCTTTCTaGCAAGTGAAGGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QNCRISTSGHAFPLLCKRSVLSF*QVKVSW
Trigger: CCAGGAAACCTTCACTTGTCAGAAAGACAAAACAGA...CCTTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp CTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGCTTCTGTTATCTTCCTaGTACCTTTACTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSSKLQNINLWTRVSAPVLLLSS*YLYSLL
Trigger: GAGAAGGGAGTAAAGGTATCAGGAAGATAACAGAAG...CACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp TGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACACTGCCAATAAACCAGCCTTaGGTGGAGATGTCATCATAT +
Preference number: 4 (lower is better)
Translates to: CASREKPTHLSNINAHTLPINQP*VEMSSY
Trigger: ATATGATGACATCTCCACTCAAGGCTGGTTTATTGG...CAGTGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp CAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAGGCCAATAAACCAGCCTTaGGTGGAGATGTCATCATAT +
Preference number: 4 (lower is better)
Translates to: QNCRISTSGHAFPLLCKRPINQP*VEMSSY
Trigger: ATATGATGACATCTCCACTCAAGGCTGGTTTATTGG...CCTTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp AGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGGTCATCTTTTGCTGACTaGACTTCTGGATCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSSLLSSQKSFVPLSTLWSSFAD*TSGSGC
Trigger: ACACCCAGATCCAGAAGTTCAGTCAGCAAAAGATGA...CCAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp CAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAGGAGTTTCATCTTTTGCTaGCTGAACTTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: QNCRISTSGHAFPLLCKRSFIFC*LNFWIW
Trigger: CCAGATCCAGAAGTTCAGTCAGCAAAAGATGAAACT...CCTTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp TTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTACCGAAGGCTTCCCTTaGGAGGTTTTTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: FLSSKLQNINLWTRVSAPTEGFP*EVFHHC
Trigger: ACAGTGATGAAAAACCTCTCAAGGGAAGCCTTCGGT...AGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR GCA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTAAGGGAAAGGCCACCTaGACGTATGACTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRKGKAT*TYDCFT
Trigger: TGTAAAGCAGTCATACGTGCAGGTGGCCTTTCCCTT...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp ATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAGGCCTTTTGGAGGGTTaGAGGGTAAGACAATGGAAT +
Preference number: 4 (lower is better)
Translates to: IKIAEYQPLDTRFRSCVKGLLEG*RVRQWN
Trigger: ATTCCATTGTCTTACCCTGCAACCCTCCAAAAGGCC...TTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp TTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAATTCACTACCTGGTTTaGTCCACTGGATATGTGGAG +
Preference number: 4 (lower is better)
Translates to: FIKIAEYQPLDTRFRSCVIHYLV*STGYVE
Trigger: CTCCACATATCCAGTGGAGCAAACCAGGTAGTGAAT...TACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp ATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTTGAGGTTCGCCTTCTaGTTCACACAACAAGATGCC +
Preference number: 4 (lower is better)
Translates to: ISFIKIAEYQPLDTRFRSLRFAF*FTQQDA
Trigger: GGCATCTTGTTGTGTGAAGCAGAAGGCGAACCTCAA...GGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp TTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTATTCTTGTCTGGAGCTaGTGGTGGAGTTTCATGATG +
Preference number: 4 (lower is better)
Translates to: FHQNCRISTSGHAFPLLCILVWS*WWSFMM
Trigger: CATCATGAAACTCCACCAGCAGCTCCAGACAAGAAT...ACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp AGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGGATTCTTGTCTGGAGCTaGTGGTGGAGTTTCATGATG +
Preference number: 4 (lower is better)
Translates to: SSSLLSSQKSFVPLSTLWILVWS*WWSFMM
Trigger: CATCATGAAACTCCACCAGCAGCTCCAGACAAGAAT...CCAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR GCA 90 bp TTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTATTGAGGTTGGAGAGATaGCAGCTGGATTTAGATGGA +
Preference number: 4 (lower is better)
Translates to: FIKIAEYQPLDTRFRSCVLRLER*QLDLDG
Trigger: TCCATCTAAATCCAGCTGGCATCTCTCCAACCTCAA...TACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR GCA 90 bp TTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTTTGAGGTTGGAGAGATaGCAGCTGGATTTAGATGGA +
Preference number: 4 (lower is better)
Translates to: FHQNCRISTSGHAFPLLCLRLER*QLDLDG
Trigger: TCCATCTAAATCCAGCTGGCATCTCTCCAACCTCAA...ACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR GCA 90 bp TGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACACTGCAGTTGAACTTCCATTaGTTTCAACGGATCCCTTCT +
Preference number: 4 (lower is better)
Translates to: CASREKPTHLSNINAHTLQLNFH*FQRIPS
Trigger: AGAAGGGATCCGTTGAAAGCAATGGAAGTTCAACTG...CAGTGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTCGTCAATATTGGCATTaGCCAGAATGGTTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: FHQNCRISTSGHAFPLLCRQYWH*PEWFRE
Trigger: TTCACGGAACCATTCTGGCCAATGCCAATATTGACG...ACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp GCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTCAAGTGAAGGTTTCCTaGCGGATCTGGAACACCAAG +
Preference number: 4 (lower is better)
Translates to: AVLFLSSKLQNINLWTRVQVKVS*RIWNTK
Trigger: CTTGGTGTTCCAGATCCGCCAGGAAACCTTCACTTG...AACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp ATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAACTGATTTTGCTGTTGTaGTCATCTCCTGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: IKIAEYQPLDTRFRSCVKLILLL*SSPASQ
Trigger: CTGGGAAGCAGGAGATGACCACAACAGCAAAATCAG...TTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp ATTGACATTCTAAGGAATGGCAGTTTCAGTTCAGCTCCTCACTCCTTTCATCACCTGATTTTGCTGTTGTaGTCATCTCCTGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: IDILRNGSFSSAPHSFHHLILLL*SSPASQ
Trigger: CTGGGAAGCAGGAGATGACCACAACAGCAAAATCAG...GTGATGAAAGGAGTGAGGAGCTGAACTGAAACTGCCATTCCTTAGAATGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp CAGAGAAAAACGGAAGGAAAAGCTAATAGGGTGAACCTGCTCCCATTACCTTTTTCTGTTTCTTCTCCCTaGACTCTAGTTAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QRKTEGKANRVNLLPLPFSVSSP*TLVSSS
Trigger: GGAGGAGCTAACTAGAGTCCAGGGAGAAGAAACAGA...AAAAGGTAATGGGAGCAGGTTCACCCTATTAGCTTTTCCTTCCGTTTTTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CCA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTCTGTTTCTTCTCCCTaGACTCTAGTTAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRSVSSP*TLVSSS
Trigger: GGAGGAGCTAACTAGAGTCCAGGGAGAAGAAACAGA...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp ATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAACTGGACCAGCTCCTTTaGAGTTATAGGCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: IKIAEYQPLDTRFRSCVKLDQLL*SYRLRL
Trigger: CAGTCTTAGCCTATAACTCCAAAGGAGCTGGTCCAG...TTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp AAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCATAAGGCTCGCTCTCTaGACCAGCTCCTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: KAVLFLSSKLQNINLWTRIRLAL*TSSFGV
Trigger: AACTCCAAAGGAGCTGGTCCAGAGAGCGAGCCTTAT...GCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACACTGGACCTTGAGAAAACTTaGTTGTTCAGGTACTCCTTC +
Preference number: 4 (lower is better)
Translates to: CASREKPTHLSNINAHTLDLEKT*LFRYSF
Trigger: GAAGGAGTACCTGAACAACCAAGTTTTCTCAAGGTC...CAGTGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp AGAAGTGGTTATGATCTCTGTTTACCAAACTGTCCACAGGCACTGGCCTCAGATGACCTTGAGAAAACTTaGTTGTTCAGGTACTCCTTC +
Preference number: 4 (lower is better)
Translates to: RSGYDLCLPNCPQALASDDLEKT*LFRYSF
Trigger: GAAGGAGTACCTGAACAACCAAGTTTTCTCAAGGTC...ATCTGAGGCCAGTGCCTGTGGACAGTTTGGTAAACAGAGATCATAACCACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp CCACAGGCACTGGCCTCAGATATCAGGTCTGCTAGGAAGAAAACAGCAATAGATCCAGCTGGATTTAGATaGAGTAGTAACGTTGATTTC +
Preference number: 4 (lower is better)
Translates to: PQALASDIRSARKKTAIDPAGFR*SSNVDF
Trigger: GAAATCAACGTTACTACTCCATCTAAATCCAGCTGG...ATCTATTGCTGTTTTCTTCCTAGCAGACCTGATATCTGAGGCCAGTGCCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp ATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTCCCTTCTCCTAGGGTaGCACCTTCTTCACTTATTG +
Preference number: 4 (lower is better)
Translates to: ISFIKIAEYQPLDTRFRSSLLLG*HLLHLL
Trigger: CAATAAGTGAAGAAGGTGCCACCCTAGGAGAAGGGA...GGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp CAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAGGATCGTCCTTAGTCCATaGAAATATTGGTTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: QNCRISTSGHAFPLLCKRIVLSP*KYWFRV
Trigger: AACCCTGAACCAATATTTTCATGGACTAAGGACGAT...CCTTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp TGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACACTGGAACCCCTGGTACTATaGACTCTATTTCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: CASREKPTHLSNINAHTLEPLVL*TLFLLI
Trigger: TATCAGAAGAAATAGAGTTCATAGTACCAGGGGTTC...CAGTGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR TCA 90 bp CTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGATAGTGTATCCCCTTTaGGTACAGTCTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: LSSKLQNINLWTRVSAPVIVYPL*VQSLQI
Trigger: TATCTGCAAAGACTGTACTCAAAGGGGATACACTAT...CACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp AGTGGTTATGATCTCTGTTTACCAAACTGTCCACAGGCACTGGCCTCAGATATCATAGTGTATCCCCTTTaGGTACAGTCTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: SGYDLCLPNCPQALASDIIVYPL*VQSLQI
Trigger: TATCTGCAAAGACTGTACTCAAAGGGGATACACTAT...GATATCTGAGGCCAGTGCCTGTGGACAGTTTGGTAAACAGAGATCATAACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp TATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCATTTGATTGTGGGTTaGGGTTCGCCTTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: YFFHQNCRISTSGHAFPLHLIVG*GSPSAS
Trigger: TGAAGCAGAAGGCGAACCTCAACCCACAATCAAATG...GAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp AGTCAAAGTGGATCTAAGTACAGGATTTGTTTCGTGTTCTGCATTTTGAGCACCGCCAGAATGGTTCCGTaGATATTTGAGGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: SQSGSKYRICFVFCILSTARMVP*IFEASH
Trigger: GTGTGAAGCCTCAAATATTCACGGAACCATTCTGGC...GGTGCTCAAAATGCAGAACACGAAACAAATCCTGTACTTAGATCCACTTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR TCA 90 bp AGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGGTCTGTTTTGTCTTTCTaGCAAGTGAAGGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSLLSSQKSFVPLSTLWSVLSF*QVKVSW
Trigger: CCAGGAAACCTTCACTTGTCAGAAAGACAAAACAGA...CCAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp TTTAAGAAGAAGAGAAGTGGTTATGATCTCTGTTTACCAAACTGTCCACAGGCAAGGATAGTCTTCCCCTaGATAGAGTGTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: FKKKRSGYDLCLPNCPQARIVFP*IECHWL
Trigger: CAGCCAGTGACACTCTATTCAGGGGAAGACTATCCT...TGCCTGTGGACAGTTTGGTAAACAGAGATCATAACCACTTCTCTTCTTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp CTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGGCTAAGACTGTTAAGTaGAATTCACTAAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LSSKLQNINLWTRVSAPVAKTVK*NSLKGS
Trigger: AGACCCCTTTAGTGAATTTCACTTAACAGTCTTAGC...CACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp TGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACACTGGCTAAGACTGTTAAGTaGAATTCACTAAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: CASREKPTHLSNINAHTLAKTVK*NSLKGS
Trigger: AGACCCCTTTAGTGAATTTCACTTAACAGTCTTAGC...CAGTGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp CTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGAGTACCTCTACAGGGTaGATCTTTTGGGTAACATTT +
Preference number: 4 (lower is better)
Translates to: LSSKLQNINLWTRVSAPVSTSTG*IFWVTF
Trigger: AAATGTTACCCAAAAGATTCACCCTGTAGAGGTACT...CACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTCATCTTTTGCTGACTaGACTTCTGGATCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRSSFAD*TSGSGC
Trigger: ACACCCAGATCCAGAAGTTCAGTCAGCAAAAGATGA...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp GCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTACCGAAGGCTTCCCTTaGGAGGTTTTTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: AVLFLSSKLQNINLWTRVTEGFP*EVFHHC
Trigger: ACAGTGATGAAAAACCTCTCAAGGGAAGCCTTCGGT...AACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR GCA 90 bp GCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTAAGGGAAAGGCCACCTaGACGTATGACTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: AVLFLSSKLQNINLWTRVKGKAT*TYDCFT
Trigger: TGTAAAGCAGTCATACGTGCAGGTGGCCTTTCCCTT...AACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp GTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTATTCACTACCTGGTTTaGTCCACTGGATATGTGGAG +
Preference number: 4 (lower is better)
Translates to: VQLLTPFITEVFCSFIHSIHYLV*STGYVE
Trigger: CTCCACATATCCAGTGGAGCAAACCAGGTAGTGAAT...AGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR GCA 90 bp CTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTTCTGCCATCTTCTGTaGCATTCATCTCAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LSSKLQNINLWTRVSAPVFCHLL*HSSQKL
Trigger: AAGCTTTTGAGATGAATGGCACAGAAGATGGCAGAA...CACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp CAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAGGTTCTGCCATCTTCTGTaGCATTCATCTCAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: QNCRISTSGHAFPLLCKRFCHLL*HSSQKL
Trigger: AAGCTTTTGAGATGAATGGCACAGAAGATGGCAGAA...CCTTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp TCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGGGCCAAACGTCCAAGTTTCCGTCAATCACTATTCTaGCATCTTCTGTGCCATTCA +
Preference number: 4 (lower is better)
Translates to: SQKSFVPLSTLWAKRPSFRQSLF*HLLCHS
Trigger: TGAATGGCACAGAAGATGGCAGAATAGTGATTGACG...GAAACTTGGACGTTTGGCCCAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR GCA 90 bp TTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTTTCCTTGGGTTGAGATaGTTGAACTCTGATGTTCTG +
Preference number: 4 (lower is better)
Translates to: FHQNCRISTSGHAFPLLCFLGLR*LNSDVL
Trigger: CAGAACATCAGAGTTCAAGCATCTCAACCCAAGGAA...ACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp ATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAATTGAGGTTGGAGAGATaGCAGCTGGATTTAGATGGA +
Preference number: 4 (lower is better)
Translates to: IKIAEYQPLDTRFRSCVKLRLER*QLDLDG
Trigger: TCCATCTAAATCCAGCTGGCATCTCTCCAACCTCAA...TTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp CAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGCTGCTTTACAATTGTTaGAACCTGTTGAACGGAGAG +
Preference number: 4 (lower is better)
Translates to: QLLTPFITEVFCSFIHSLLLYNC*NLLNGE
Trigger: CTCTCCGTTCAACAGGTTCCAACAATTGTAAAGCAG...CAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp TTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTTGCAGGGTAAGACAATaGAATCCCCTTCTTCTACAT +
Preference number: 4 (lower is better)
Translates to: FHQNCRISTSGHAFPLLCCRVRQ*NPLLLH
Trigger: ATGTAGAAGAAGGGGATTCCATTGTCTTACCCTGCA...ACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp CTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTCCCCAACAAATTGTTaGCTGTACAGCGATAATTTC +
Preference number: 4 (lower is better)
Translates to: LSSKLQNINLWTRVSAPVSPTNC*LYSDNF
Trigger: GAAATTATCGCTGTACAGCCAACAATTTGTTGGGGA...CACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp AGTGGTTATGATCTCTGTTTACCAAACTGTCCACAGGCACTGGCCTCAGATATCTCCCCAACAAATTGTTaGCTGTACAGCGATAATTTC +
Preference number: 4 (lower is better)
Translates to: SGYDLCLPNCPQALASDISPTNC*LYSDNF
Trigger: GAAATTATCGCTGTACAGCCAACAATTTGTTGGGGA...GATATCTGAGGCCAGTGCCTGTGGACAGTTTGGTAAACAGAGATCATAACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp CAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAGGCGTGAAAATCATGACTaGCTTTCCCCAACAAATTGT +
Preference number: 4 (lower is better)
Translates to: QNCRISTSGHAFPLLCKRRENHD*LSPTNC
Trigger: ACAATTTGTTGGGGAAAGCCAGTCATGATTTTCACG...CCTTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp TATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTTCTTTTTCCAGCGTaGAGGCTCTTCTACTGTGAC +
Preference number: 4 (lower is better)
Translates to: YFFHQNCRISTSGHAFPLLLFPA*RLFYCD
Trigger: GTCACAGTAGAAGAGCCTCCACGCTGGAAAAAGAAG...GAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp CCACAGGCACTGGCCTCAGATATCAGGTCTGCTAGGAAGAAAACAGCAATAGATAAAGTCACCAGGAAATaGATGTTTTTCAATCGGCAA +
Preference number: 4 (lower is better)
Translates to: PQALASDIRSARKKTAIDKVTRK*MFFNRQ
Trigger: TTGCCGATTGAAAAACATCCATTTCCTGGTGACTTT...ATCTATTGCTGTTTTCTTCCTAGCAGACCTGATATCTGAGGCCAGTGCCTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp GAAACATCTATGAGGAGAAACAAGGAGCGATTCTTAAGTAGAAGGGCTGGAGATCGTCAATATTGGCATTaGCCAGAATGGTTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: ETSMRRNKERFLSRRAGDRQYWH*PEWFRE
Trigger: TTCACGGAACCATTCTGGCCAATGCCAATATTGACG...ATCTCCAGCCCTTCTACTTAAGAATCGCTCCTTGTTTCTCCTCATAGATGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp TTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGGAAGGCAGGCTGGCGTaGCTTCTTCCGACTTCGTTT +
Preference number: 4 (lower is better)
Translates to: FLKAVLFLSSKLQNINLWEGRLA*LLPTSF
Trigger: AAACGAAGTCGGAAGAAGCCACGCCAGCCTGCCTTC...CCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp AAGTATAATTGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACTTGTCTGGAGCTGCTaGTGGAGTTTCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: KYNCASREKPTHLSNINALVWSC*WSFMMV
Trigger: GACCATCATGAAACTCCACCAGCAGCTCCAGACAAG...TGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACAATTATACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CCA 90 bp CAGAGAAAAACGGAAGGAAAAGCTAATAGGGTGAACCTGCTCCCATTACCTTTTGCCCATTCTGTTCCATaGATTTCAAAGGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: QRKTEGKANRVNLLPLPFAHSVP*ISKAPI
Trigger: AATGGGAGCCTTTGAAATCCATGGAACAGAATGGGC...AAAAGGTAATGGGAGCAGGTTCACCCTATTAGCTTTTCCTTCCGTTTTTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CCA 90 bp ATTGACATTCTAAGGAATGGCAGTTTCAGTTCAGCTCCTCACTCCTTTCATCACGCCCATTCTGTTCCATaGATTTCAAAGGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: IDILRNGSFSSAPHSFHHAHSVP*ISKAPI
Trigger: AATGGGAGCCTTTGAAATCCATGGAACAGAATGGGC...GTGATGAAAGGAGTGAGGAGCTGAACTGAAACTGCCATTCCTTAGAATGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp TCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGGGCCAAACGTCCAAGTTTCTTCCACCAATTTATCTaGTACCCTCTTAGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: SQKSFVPLSTLWAKRPSFFHQFI*YPLRSP
Trigger: CGGACTTCTAAGAGGGTACCAGATAAATTGGTGGAA...GAAACTTGGACGTTTGGCCCAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp TATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGGACCAGCTCCTTTaGAGTTATAGGCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: YFFHQNCRISTSGHAFPLLDQLL*SYRLRL
Trigger: CAGTCTTAGCCTATAACTCCAAAGGAGCTGGTCCAG...GAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAGACCTTGAGAAAACTTaGTTGTTCAGGTACTCCTTC +
Preference number: 4 (lower is better)
Translates to: FIKIAEYQPLDTRFRSCVDLEKT*LFRYSF
Trigger: GAAGGAGTACCTGAACAACCAAGTTTTCTCAAGGTC...TACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp AAAGTCCATGGACCTTGGCCTGCTTTGCTGAAGAGTTACAACGGAATGAAACCACCAGCTGGATTTAGATaGAGTAGTAACGTTGATTTC +
Preference number: 4 (lower is better)
Translates to: KVHGPWPALLKSYNGMKPPAGFR*SSNVDF
Trigger: GAAATCAACGTTACTACTCCATCTAAATCCAGCTGG...TGGTTTCATTCCGTTGTAACTCTTCAGCAAAGCAGGCCAAGGTCCATGGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CCA 90 bp ACTTATCTCACTATAGGAACACTAGGGTACATCTACTATCACAGACCACAAACCTCCCTTCTCCTAGGGTaGCACCTTCTTCACTTATTG +
Preference number: 4 (lower is better)
Translates to: TYLTIGTLGYIYYHRPQTSLLLG*HLLHLL
Trigger: CAATAAGTGAAGAAGGTGCCACCCTAGGAGAAGGGA...GGTTTGTGGTCTGTGATAGTAGATGTACCCTAGTGTTCCTATAGTGAGATAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CCA 90 bp AGTCAAAGTGGATCTAAGTACAGGATTTGTTTCGTGTTCTGCATTTTGAGCACCTGTCAGCACTCTCTGTaGGCTGCATGTTCCTATTCA +
Preference number: 4 (lower is better)
Translates to: SQSGSKYRICFVFCILSTCQHSL*AACSYS
Trigger: TGAATAGGAACATGCAGCCCACAGAGAGTGCTGACA...GGTGCTCAAAATGCAGAACACGAAACAAATCCTGTACTTAGATCCACTTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp GCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTGTCAGCACTCTCTGTaGGCTGCATGTTCCTATTCA +
Preference number: 4 (lower is better)
Translates to: AVLFLSSKLQNINLWTRVCQHSL*AACSYS
Trigger: TGAATAGGAACATGCAGCCCACAGAGAGTGCTGACA...AACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp ATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAATTGTTGGAACCTGTTaGACGGAGAGTGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: IKIAEYQPLDTRFRSCVKIVGTC*TESGIS
Trigger: TGAAATACCACTCTCCGTTCAACAGGTTCCAACAAT...TTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp TCAGTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACATTGTTGGAACCTGTTaGACGGAGAGTGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: SVQLLTPFITEVFCSFIHIVGTC*TESGIS
Trigger: TGAAATACCACTCTCCGTTCAACAGGTTCCAACAAT...GTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp TTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTGAACCCCTGGTACTATaGACTCTATTTCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: FHQNCRISTSGHAFPLLCEPLVL*TLFLLI
Trigger: TATCAGAAGAAATAGAGTTCATAGTACCAGGGGTTC...ACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp TTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGATAGTGTATCCCCTTTaGGTACAGTCTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: FFHQNCRISTSGHAFPLLIVYPL*VQSLQI
Trigger: TATCTGCAAAGACTGTACTCAAAGGGGATACACTAT...CAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp TTTAAGAAGAAGAGAAGTGGTTATGATCTCTGTTTACCAAACTGTCCACAGGCACATTTGATTGTGGGTTaGGGTTCGCCTTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: FKKKRSGYDLCLPNCPQAHLIVG*GSPSAS
Trigger: TGAAGCAGAAGGCGAACCTCAACCCACAATCAAATG...TGCCTGTGGACAGTTTGGTAAACAGAGATCATAACCACTTCTCTTCTTCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp TATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCACTGTGTTTCAAATGTaGGTCACACTGGCTTTCGCA +
Preference number: 4 (lower is better)
Translates to: YFFHQNCRISTSGHAFPLTVFQM*VTLAFA
Trigger: TGCGAAAGCCAGTGTGACTCACATTTGAAACACAGT...GAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp GATGCCTGTGGGCAAAACATATGCTTCATGTTTATTACTGCATTGGCTCTTTTGGAGATGCTTGAACTCTaGTGTTCTGGGGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: DACGQNICFMFITALALLEMLEL*CSGDSC
Trigger: ACAAGAATCCCCAGAACATCAGAGTTCAAGCATCTC...CAAAAGAGCCAATGCAGTAATAAACATGAAGCATATGTTTTGCCCACAGGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR TCA 90 bp AAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGAGATGCTTGAACTCTaGTGTTCTGGGGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: KAVLFLSSKLQNINLWTREMLEL*CSGDSC
Trigger: ACAAGAATCCCCAGAACATCAGAGTTCAAGCATCTC...GCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp TTCAGTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCAGAGATGCTTGAACTCTaGTGTTCTGGGGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: FSSAPHSFHHRSLLFLYPEMLEL*CSGDSC
Trigger: ACAAGAATCCCCAGAACATCAGAGTTCAAGCATCTC...TGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp TCAGTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACCCAATAAACCAGCCTTaGGTGGAGATGTCATCATAT +
Preference number: 4 (lower is better)
Translates to: SVQLLTPFITEVFCSFIHPINQP*VEMSSY
Trigger: ATATGATGACATCTCCACTCAAGGCTGGTTTATTGG...GTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp GTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTAGTTTCATCTTTTGCTaGCTGAACTTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: VQLLTPFITEVFCSFIHSSFIFC*LNFWIW
Trigger: CCAGATCCAGAAGTTCAGTCAGCAAAAGATGAAACT...AGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR GCA 90 bp CAGGTAGATGTGGAGTATCTGAAATGGGAACTTTGGATTCAGTCAAAGTGGATCCGTCAATCACTATTCTaGCATCTTCTGTGCCATTCA +
Preference number: 4 (lower is better)
Translates to: QVDVEYLKWELWIQSKWIRQSLF*HLLCHS
Trigger: TGAATGGCACAGAAGATGGCAGAATAGTGATTGACG...GATCCACTTTGACTGAATCCAAAGTTCCCATTTCAGATACTCCACATCTACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR GCA 90 bp ATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAACGTCAATCACTATTCTaGCATCTTCTGTGCCATTCA +
Preference number: 4 (lower is better)
Translates to: IKIAEYQPLDTRFRSCVKRQSLF*HLLCHS
Trigger: TGAATGGCACAGAAGATGGCAGAATAGTGATTGACG...TTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp AAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCATTCTTGTCTGGAGCTaGTGGTGGAGTTTCATGATG +
Preference number: 4 (lower is better)
Translates to: KAVLFLSSKLQNINLWTRILVWS*WWSFMM
Trigger: CATCATGAAACTCCACCAGCAGCTCCAGACAAGAAT...GCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp TCAGTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTTCCTTGGGTTGAGATaGTTGAACTCTGATGTTCTG +
Preference number: 4 (lower is better)
Translates to: SVQLLTPFITEVFCSFIHFLGLR*LNSDVL
Trigger: CAGAACATCAGAGTTCAAGCATCTCAACCCAAGGAA...GTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR GCA 90 bp TTCAGTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCATTGAGGTTGGAGAGATaGCAGCTGGATTTAGATGGA +
Preference number: 4 (lower is better)
Translates to: FSSAPHSFHHRSLLFLYPLRLER*QLDLDG
Trigger: TCCATCTAAATCCAGCTGGCATCTCTCCAACCTCAA...TGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR GCA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTCAGTTGAACTTCCATTaGTTTCAACGGATCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRQLNFH*FQRIPS
Trigger: AGAAGGGATCCGTTGAAAGCAATGGAAGTTCAACTG...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR GCA 90 bp GTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTCAACTCAACAGCTTCTaGTTCAAAACCATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VQLLTPFITEVFCSFIHSQLNSF*FKTIFL
Trigger: CAGGAAGATGGTTTTGAAGCAGAAGCTGTTGAGTTG...AGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp ATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCCTGCTTTACAATTGTTaGAACCTGTTGAACGGAGAG +
Preference number: 4 (lower is better)
Translates to: ISFIKIAEYQPLDTRFRSLLYNC*NLLNGE
Trigger: CTCTCCGTTCAACAGGTTCCAACAATTGTAAAGCAG...GGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp TTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTACAGATCTCCTCTTTaGCTCATGTATACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: FFHQNCRISTSGHAFPLLYRSPL*LMYTLS
Trigger: TGAGAGAGTATACATGAGCCAAAGAGGAGATCTGTA...CAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp TTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTTCCCCAACAAATTGTTaGCTGTACAGCGATAATTTC +
Preference number: 4 (lower is better)
Translates to: FHQNCRISTSGHAFPLLCSPTNC*LYSDNF
Trigger: GAAATTATCGCTGTACAGCCAACAATTTGTTGGGGA...ACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp TTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTCGTGAAAATCATGACTaGCTTTCCCCAACAAATTGT +
Preference number: 4 (lower is better)
Translates to: FHQNCRISTSGHAFPLLCRENHD*LSPTNC
Trigger: ACAATTTGTTGGGGAAAGCCAGTCATGATTTTCACG...ACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp AGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGGAAATGTGAGTCACACTaGCTTTCGCAGTATAGTTCA +
Preference number: 4 (lower is better)
Translates to: SSSLLSSQKSFVPLSTLWKCESH*LSQYSS
Trigger: TGAACTATACTGCGAAAGCCAGTGTGACTCACATTT...CCAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp CACACTGAACAGGAGAGCCAGGTAGATGTGGAGTATCTGAAATGGGAACTTTGGATCACACGTAGTGTGTaGTTTGTAACTATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: HTEQESQVDVEYLKWELWITRSV*FVTISS
Trigger: AGAAGAAATAGTTACAAACCACACACTACGTGTGAT...CCAAAGTTCCCATTTCAGATACTCCACATCTACCTGGCTCTCCTGTTCAGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCACCAATTTATCTaGTACCCTCTTAGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRFHQFI*YPLRSP
Trigger: CGGACTTCTAAGAGGGTACCAGATAAATTGGTGGAA...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp ATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTTCCACCAATTTATCTaGTACCCTCTTAGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: ISFIKIAEYQPLDTRFRSFHQFI*YPLRSP
Trigger: CGGACTTCTAAGAGGGTACCAGATAAATTGGTGGAA...GGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGACCTTGAGAAAACTTaGTTGTTCAGGTACTCCTTC +
Preference number: 4 (lower is better)
Translates to: FLSSKLQNINLWTRVSAPDLEKT*LFRYSF
Trigger: GAAGGAGTACCTGAACAACCAAGTTTTCTCAAGGTC...AGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTCCAGCTGGATTTAGATaGAGTAGTAACGTTGATTTC +
Preference number: 4 (lower is better)
Translates to: FHQNCRISTSGHAFPLLCPAGFR*SSNVDF
Trigger: GAAATCAACGTTACTACTCCATCTAAATCCAGCTGG...ACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
3UTR CAA 72 bp GAGCCAGGTAGATGTGGAGTATCTGAAATGGGAACTTaGGATTCAGTCAAAGTGGATCTAAGTACAGGATTT +
Preference number: 4 (lower is better)
Translates to: EPGRCGVSEMGT*DSVKVDLSTGF
Trigger: AAATCCTGTACTTAGATCCACTTTGACTGAATCCAAAGTTCCCATTTCAGATACTCCACATCTACCTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp ATTGACATTCTAAGGAATGGCAGTTTCAGTTCAGCTCCTCACTCCTTTCATCACGAACCCCTGGTACTATaGACTCTATTTCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: IDILRNGSFSSAPHSFHHEPLVL*TLFLLI
Trigger: TATCAGAAGAAATAGAGTTCATAGTACCAGGGGTTC...GTGATGAAAGGAGTGAGGAGCTGAACTGAAACTGCCATTCCTTAGAATGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp TTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTTGCTTGATGGAATTTaGACTGTTCACAGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FFHQNCRISTSGHAFPLLLLDGI*TVHSQF
Trigger: AAACTGACTGTGAACAGTTCAAATTCCATCAAGCAA...CAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp TTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTATTGCTTGATGGAATTTaGACTGTTCACAGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FIKIAEYQPLDTRFRSCVLLDGI*TVHSQF
Trigger: AAACTGACTGTGAACAGTTCAAATTCCATCAAGCAA...TACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp ATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGGGTTTCCTTTGCTTaGTGGAATTTGAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: ISFIKIAEYQPLDTRFRSWVSFA*WNLNCS
Trigger: TGAACAGTTCAAATTCCATCAAGCAAAGGAAACCCA...GGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp CAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTACTGTGTTTCAAATGTaGGTCACACTGGCTTTCGCA +
Preference number: 4 (lower is better)
Translates to: QCYFFHQNCRISTSGHAFTVFQM*VTLAFA
Trigger: TGCGAAAGCCAGTGTGACTCACATTTGAAACACAGT...AAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp AGTCAAAGTGGATCTAAGTACAGGATTTGTTTCGTGTTCTGCATTTTGAGCACCTCTGTTTTGTCTTTCTaGCAAGTGAAGGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SQSGSKYRICFVFCILSTSVLSF*QVKVSW
Trigger: CCAGGAAACCTTCACTTGTCAGAAAGACAAAACAGA...GGTGCTCAAAATGCAGAACACGAAACAAATCCTGTACTTAGATCCACTTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR TCA 90 bp ATAACCAGCTTGCTTGCTTACAATCTTTTATCCTGTAGTGAATCGAATTCACTAAGGATAGTCTTCCCCTaGATAGAGTGTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: ITSLLAYNLLSCSESNSLRIVFP*IECHWL
Trigger: CAGCCAGTGACACTCTATTCAGGGGAAGACTATCCT...TAGTGAATTCGATTCACTACAGGATAAAAGATTGTAAGCAAGCAAGCTGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTGCTAAGACTGTTAAGTaGAATTCACTAAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRAKTVK*NSLKGS
Trigger: AGACCCCTTTAGTGAATTTCACTTAACAGTCTTAGC...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp TATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTTCTGTTATCTTCCTaGTACCTTTACTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: YFFHQNCRISTSGHAFPLLLLSS*YLYSLL
Trigger: GAGAAGGGAGTAAAGGTATCAGGAAGATAACAGAAG...GAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp ATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAAGTACCTCTACAGGGTaGATCTTTTGGGTAACATTT +
Preference number: 4 (lower is better)
Translates to: IKIAEYQPLDTRFRSCVKSTSTG*IFWVTF
Trigger: AAATGTTACCCAAAAGATTCACCCTGTAGAGGTACT...TTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp AAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCTTCTTAGTCATTAGGTaGACAATATGTTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: KAVLFLSSKLQNINLWTRFLVIR*TICSAP
Trigger: GGGAGCGGAACATATTGTTCACCTAATGACTAAGAA...GCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR TCA 90 bp GCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTCCAATAAACCAGCCTTaGGTGGAGATGTCATCATAT +
Preference number: 4 (lower is better)
Translates to: AVLFLSSKLQNINLWTRVPINQP*VEMSSY
Trigger: ATATGATGACATCTCCACTCAAGGCTGGTTTATTGG...AACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp CAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTTCATCTTTTGCTGACTaGACTTCTGGATCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: QCYFFHQNCRISTSGHAFSSFAD*TSGSGC
Trigger: ACACCCAGATCCAGAAGTTCAGTCAGCAAAAGATGA...AAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp AAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCAGTTTCATCTTTTGCTaGCTGAACTTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: KAVLFLSSKLQNINLWTRSFIFC*LNFWIW
Trigger: CCAGATCCAGAAGTTCAGTCAGCAAAAGATGAAACT...GCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR GCA 90 bp TCAGTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTTCTGCCATCTTCTGTaGCATTCATCTCAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SVQLLTPFITEVFCSFIHFCHLL*HSSQKL
Trigger: AAGCTTTTGAGATGAATGGCACAGAAGATGGCAGAA...GTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR GCA 90 bp TCTTTTGTTCCTTTATCCACTCTCTGGGCCAAACGTCCAAGTTTCCAAAGTGGACTTGAATCACTAGCATaGTTTAAACTGTTCACAGTC +
Preference number: 4 (lower is better)
Translates to: SFVPLSTLWAKRPSFQSGLESLA*FKLFTV
Trigger: GACTGTGAACAGTTTAAAGCATGCTAGTGATTCAAG...TCCACTTTGGAAACTTGGACGTTTGGCCCAGAGAGTGGATAAAGGAACAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp AAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCCTGCTTTACAATTGTTaGAACCTGTTGAACGGAGAG +
Preference number: 4 (lower is better)
Translates to: KAVLFLSSKLQNINLWTRLLYNC*NLLNGE
Trigger: CTCTCCGTTCAACAGGTTCCAACAATTGTAAAGCAG...GCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp TTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTTACAGATCTCCTCTTTaGCTCATGTATACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: FLSSKLQNINLWTRVSAPYRSPL*LMYTLS
Trigger: TGAGAGAGTATACATGAGCCAAAGAGGAGATCTGTA...AGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp GAAACATCTATGAGGAGAAACAAGGAGCGATTCTTAAGTAGAAGGGCTGGAGATTACAGATCTCCTCTTTaGCTCATGTATACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: ETSMRRNKERFLSRRAGDYRSPL*LMYTLS
Trigger: TGAGAGAGTATACATGAGCCAAAGAGGAGATCTGTA...ATCTCCAGCCCTTCTACTTAAGAATCGCTCCTTGTTTCTCCTCATAGATGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp ATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAAAATGTGAGTCACACTaGCTTTCGCAGTATAGTTCA +
Preference number: 4 (lower is better)
Translates to: IKIAEYQPLDTRFRSCVKKCESH*LSQYSS
Trigger: TGAACTATACTGCGAAAGCCAGTGTGACTCACATTT...TTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGAT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp GAATTTTTAGAAACATCTATGAGGAGAAACAAGGAGCGATTCTTAAGTAGAAGGCTTGTCTGGAGCTGCTaGTGGAGTTTCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: EFLETSMRRNKERFLSRRLVWSC*WSFMMV
Trigger: GACCATCATGAAACTCCACCAGCAGCTCCAGACAAG...CCTTCTACTTAAGAATCGCTCCTTGTTTCTCCTCATAGATGTTTCTAAAAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp CAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTGCCCATTCTGTTCCATaGATTTCAAAGGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: QCYFFHQNCRISTSGHAFAHSVP*ISKAPI
Trigger: AATGGGAGCCTTTGAAATCCATGGAACAGAATGGGC...AAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp ATTGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACACCATCCAACAGGCTTTTaGTTTTCCACCAATTTATCT +
Preference number: 4 (lower is better)
Translates to: IVHPERNPHILATSMHTHHPTGF*FSTNLS
Trigger: AGATAAATTGGTGGAAAACCAAAAGCCTGTTGGATG...GTGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp AGTCAAAGTGGATCTAAGTACAGGATTTGTTTCGTGTTCTGCATTTTGAGCACCTGGGTTTCCTTTGCTTaGTGGAATTTGAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: SQSGSKYRICFVFCILSTWVSFA*WNLNCS
Trigger: TGAACAGTTCAAATTCCATCAAGCAAAGGAAACCCA...GGTGCTCAAAATGCAGAACACGAAACAAATCCTGTACTTAGATCCACTTTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR TCA 90 bp AATTGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACATTTGTATTTTGTTGTTaGGTTGAGGTTGGAGAGATG +
Preference number: 4 (lower is better)
Translates to: NCASREKPTHLSNINAHTFVFCC*VEVGEM
Trigger: CATCTCTCCAACCTCAACTCAACAACAAAATACAAA...TGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp CAGTTCTTCAAAACTAAGTATAATTGTGCATCCAGAGAGAAACCCACACATCTTTCATCTTTTGCTGACTaGACTTCTGGATCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: QFFKTKYNCASREKPTHLSSFAD*TSGSGC
Trigger: ACACCCAGATCCAGAAGTTCAGTCAGCAAAAGATGA...AAGATGTGTGGGTTTCTCTCTGGATGCACAATTATACTTAGTTTTGAAGAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR GCA 90 bp CAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCAGTTGAACTTCCATTaGTTTCAACGGATCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QCYFFHQNCRISTSGHAFQLNFH*FQRIPS
Trigger: AGAAGGGATCCGTTGAAAGCAATGGAAGTTCAACTG...AAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGATAGATGTGCAAAGGTaGGAGGCCTTTTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: FLKAVLFLSSKLQNINLWIDVQR*EAFWRV
Trigger: AACCCTCCAAAAGGCCTCCCACCTTTGCACATCTAT...CCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp ATAACCAGCTTGCTTGCTTACAATCTTTTATCCTGTAGTGAATCGAATTCACTACTTCTTTTTCCAGCGTaGAGGCTCTTCTACTGTGAC +
Preference number: 4 (lower is better)
Translates to: ITSLLAYNLLSCSESNSLLLFPA*RLFYCD
Trigger: GTCACAGTAGAAGAGCCTCCACGCTGGAAAAAGAAG...TAGTGAATTCGATTCACTACAGGATAAAAGATTGTAAGCAAGCAAGCTGGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CCA 90 bp AAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCAAATGTGAGTCACACTaGCTTTCGCAGTATAGTTCA +
Preference number: 4 (lower is better)
Translates to: KAVLFLSSKLQNINLWTRKCESH*LSQYSS
Trigger: TGAACTATACTGCGAAAGCCAGTGTGACTCACATTT...GCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp AAGTATAATTGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCATTCCACCAATTTATCTaGTACCCTCTTAGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: KYNCASREKPTHLSNINAFHQFI*YPLRSP
Trigger: CGGACTTCTAAGAGGGTACCAGATAAATTGGTGGAA...TGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACAATTATACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TCAGTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACCATCCAACAGGCTTTTaGTTTTCCACCAATTTATCT +
Preference number: 4 (lower is better)
Translates to: SVQLLTPFITEVFCSFIHHPTGF*FSTNLS
Trigger: AGATAAATTGGTGGAAAACCAAAAGCCTGTTGGATG...GTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTCATCCAACAGGCTTTTaGTTTTCCACCAATTTATCT +
Preference number: 4 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRHPTGF*FSTNLS
Trigger: AGATAAATTGGTGGAAAACCAAAAGCCTGTTGGATG...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGCTGGACCAGCTCCTTTaGAGTTATAGGCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: FLKAVLFLSSKLQNINLWLDQLL*SYRLRL
Trigger: CAGTCTTAGCCTATAACTCCAAAGGAGCTGGTCCAG...CCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCCAGCTGGATTTAGATaGAGTAGTAACGTTGATTTC +
Preference number: 4 (lower is better)
Translates to: YFFHQNCRISTSGHAFPLPAGFR*SSNVDF
Trigger: GAAATCAACGTTACTACTCCATCTAAATCCAGCTGG...GAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp ATAACCAGCTTGCTTGCTTACAATCTTTTATCCTGTAGTGAATCGAATTCACTATCCCTTCTCCTAGGGTaGCACCTTCTTCACTTATTG +
Preference number: 4 (lower is better)
Translates to: ITSLLAYNLLSCSESNSLSLLLG*HLLHLL
Trigger: CAATAAGTGAAGAAGGTGCCACCCTAGGAGAAGGGA...TAGTGAATTCGATTCACTACAGGATAAAAGATTGTAAGCAAGCAAGCTGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
3UTR CAA 72 bp TTCTTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATaGCAGAATATCAACCTCTGGACACGCGTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: FFLKAVLFLSSK*QNINLWTRVSA
Trigger: AGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR TCA 90 bp TATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCTTTGTATTTTGTTGTTaGGTTGAGGTTGGAGAGATG +
Preference number: 4 (lower is better)
Translates to: YFFHQNCRISTSGHAFPLFVFCC*VEVGEM
Trigger: CATCTCTCCAACCTCAACTCAACAACAAAATACAAA...GAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp GAAAGAGAGCCAACATCCCTTTTAAGAAGAAGAGAAGTGGTTATGATCTCTGTTCGTGAAAATCATGACTaGCTTTCCCCAACAAATTGT +
Preference number: 4 (lower is better)
Translates to: EREPTSLLRRREVVMISVRENHD*LSPTNC
Trigger: ACAATTTGTTGGGGAAAGCCAGTCATGATTTTCACG...AACAGAGATCATAACCACTTCTCTTCTTCTTAAAAGGGATGTTGGCTCTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CCA 90 bp ATAACCAGCTTGCTTGCTTACAATCTTTTATCCTGTAGTGAATCGAATTCACTAGCCCATTCTGTTCCATaGATTTCAAAGGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: ITSLLAYNLLSCSESNSLAHSVP*ISKAPI
Trigger: AATGGGAGCCTTTGAAATCCATGGAACAGAATGGGC...TAGTGAATTCGATTCACTACAGGATAAAAGATTGTAAGCAAGCAAGCTGGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTATCACACGTAGTGTGTaGTTTGTAACTATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLSSKLQNINLWTRVSAPITRSV*FVTISS
Trigger: AGAAGAAATAGTTACAAACCACACACTACGTGTGAT...AGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp GCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTCATCCAACAGGCTTTTaGTTTTCCACCAATTTATCT +
Preference number: 4 (lower is better)
Translates to: AVLFLSSKLQNINLWTRVHPTGF*FSTNLS
Trigger: AGATAAATTGGTGGAAAACCAAAAGCCTGTTGGATG...AACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TTCAGTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCATTGATGGAATTTGCCTaGGAACAAATTTCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: FSSAPHSFHHRSLLFLYPLMEFA*EQISVD
Trigger: ATCCACAGAAATTTGTTCCCAGGCAAATTCCATCAA...TGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp AGGAGAAACAAGGAGCGATTCTTAAGTAGAAGGGCTGGAGATTGTATAATAAATGCTAAGACTGTTAAGTaGAATTCACTAAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: RRNKERFLSRRAGDCIINAKTVK*NSLKGS
Trigger: AGACCCCTTTAGTGAATTTCACTTAACAGTCTTAGC...ATTTATTATACAATCTCCAGCCCTTCTACTTAAGAATCGCTCCTTGTTTCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp TTTAAGAAGAAGAGAAGTGGTTATGATCTCTGTTTACCAAACTGTCCACAGGCATTTGTATTTTGTTGTTaGGTTGAGGTTGGAGAGATG +
Preference number: 4 (lower is better)
Translates to: FKKKRSGYDLCLPNCPQAFVFCC*VEVGEM
Trigger: CATCTCTCCAACCTCAACTCAACAACAAAATACAAA...TGCCTGTGGACAGTTTGGTAAACAGAGATCATAACCACTTCTCTTCTTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp ATAACCAGCTTGCTTGCTTACAATCTTTTATCCTGTAGTGAATCGAATTCACTAAGTTTCATCTTTTGCTaGCTGAACTTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: ITSLLAYNLLSCSESNSLSFIFC*LNFWIW
Trigger: CCAGATCCAGAAGTTCAGTCAGCAAAAGATGAAACT...TAGTGAATTCGATTCACTACAGGATAAAAGATTGTAAGCAAGCAAGCTGGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR GCA 90 bp ATAACCAGCTTGCTTGCTTACAATCTTTTATCCTGTAGTGAATCGAATTCACTATTCCTTGGGTTGAGATaGTTGAACTCTGATGTTCTG +
Preference number: 4 (lower is better)
Translates to: ITSLLAYNLLSCSESNSLFLGLR*LNSDVL
Trigger: CAGAACATCAGAGTTCAAGCATCTCAACCCAAGGAA...TAGTGAATTCGATTCACTACAGGATAAAAGATTGTAAGCAAGCAAGCTGGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CCA 90 bp TTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGTGCAGGGTAAGACAATaGAATCCCCTTCTTCTACAT +
Preference number: 4 (lower is better)
Translates to: FLKAVLFLSSKLQNINLWCRVRQ*NPLLLH
Trigger: ATGTAGAAGAAGGGGATTCCATTGTCTTACCCTGCA...CCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp CAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTAAAGTCACCAGGAAATaGATGTTTTTCAATCGGCAA +
Preference number: 4 (lower is better)
Translates to: QCYFFHQNCRISTSGHAFKVTRK*MFFNRQ
Trigger: TTGCCGATTGAAAAACATCCATTTCCTGGTGACTTT...AAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CCA 90 bp TTCAGTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCAATCACACGTAGTGTGTaGTTTGTAACTATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FSSAPHSFHHRSLLFLYPITRSV*FVTISS
Trigger: AGAAGAAATAGTTACAAACCACACACTACGTGTGAT...TGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAACTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp TTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGATCGTCCTTAGTCCATaGAAATATTGGTTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: FLKAVLFLSSKLQNINLWIVLSP*KYWFRV
Trigger: AACCCTGAACCAATATTTTCATGGACTAAGGACGAT...CCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR GCA 90 bp AGGAGAAACAAGGAGCGATTCTTAAGTAGAAGGGCTGGAGATTGTATAATAAATTTGCTTGATGGAATTTaGCTGGGAACAAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: RRNKERFLSRRAGDCIINLLDGI*LGTNFC
Trigger: ACAGAAATTTGTTCCCAGGCAAATTCCATCAAGCAA...ATTTATTATACAATCTCCAGCCCTTCTACTTAAGAATCGCTCCTTGTTTCTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR TCA 90 bp TTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGTTTGTATTTTGTTGTTaGGTTGAGGTTGGAGAGATG +
Preference number: 4 (lower is better)
Translates to: FLKAVLFLSSKLQNINLWFVFCC*VEVGEM
Trigger: CATCTCTCCAACCTCAACTCAACAACAAAATACAAA...CCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CCA 90 bp TTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGAAAGTCACCAGGAAATaGATGTTTTTCAATCGGCAA +
Preference number: 4 (lower is better)
Translates to: FLKAVLFLSSKLQNINLWKVTRK*MFFNRQ
Trigger: TTGCCGATTGAAAAACATCCATTTCCTGGTGACTTT...CCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
3UTR CAA 72 bp AACATATGCTTCATGTTTATTACTGCATTGGCTCTTTaGCATGTCCACAATTTAAATCCCCAAGTAACACAA +
Preference number: 4 (lower is better)
Translates to: NICFMFITALAL*HVHNLNPQVTQ
Trigger: TTGTGTTACTTGGGGATTTAAATTGTGGACATGCAAAAGAGCCAATGCAGTAATAAACATGAAGCATATGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CCA 90 bp TTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGATCACACGTAGTGTGTaGTTTGTAACTATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLKAVLFLSSKLQNINLWITRSV*FVTISS
Trigger: AGAAGAAATAGTTACAAACCACACACTACGTGTGAT...CCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS CCA 90 bp CCAGGGGATGTGTCTCATCAGCCACTTCCCAGACCACGGTGGCCTTaGGAGAAGCAAAGTACTCGCAGTGTAAGAAAGCGCTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: PGDVSHQPLPRPRWP*EKQSTRSVRKRCSQ
Trigger: TTGGCTACAGCGCTTTCTTACACTGCGAGTACTTTGCTTCTCCCAAGGCCACCGTGGTCTGGGAAGTGGCTGATGAGACACATCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CCA 90 bp CACCTTCCAGGGGATGTGTCTCATCAGCCACTTCCCAGACCACGGTaGCCTTGGGAGAAGCAAAGTACTCGCAGTGTAAGAAAGCGCTGT +
Preference number: 5 (lower is better)
Translates to: HLPGDVSHQPLPRPR*PWEKQSTRSVRKRC
Trigger: ACAGCGCTTTCTTACACTGCGAGTACTTTGCTTCTCCCAAGGCCACCGTGGTCTGGGAAGTGGCTGATGAGACACATCCCCTGGAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS GCA 90 bp CAAGCCATTGAGTCTCCATTTGATTGTGGGTTGAGGTTCGCCTTCTaGTTCACACAACAAGATGCCACTGCTCCCCGTGCTGTACACGGC +
Preference number: 5 (lower is better)
Translates to: QAIESPFDCGLRFAF*FTQQDATAPRAVHG
Trigger: GCCGTGTACAGCACGGGGAGCAGTGGCATCTTGTTGTGTGAAGCAGAAGGCGAACCTCAACCCACAATCAAATGGAGACTCAATGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS GCA 90 bp TCTCCCTCTCCATATTCCACTAAACTGTCAGCACTCTCTGTGGGCTaGATGTTCCTATTCAGGGACCGAAGGCTTCCCTTGAGAGGTTTT +
Preference number: 5 (lower is better)
Translates to: SPSPYSTKLSALSVG*MFLFRDRRLPLRGF
Trigger: AAAACCTCTCAAGGGAAGCCTTCGGTCCCTGAATAGGAACATGCAGCCCACAGAGAGTGCTGACAGTTTAGTGGAATATGGAGAGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp TTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGCAGACCACGGTGGCCTaGGGAGAAGCAAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: FFHQNCRISTSGHAFPLLQTTVA*GEAKYS
Trigger: CGAGTACTTTGCTTCTCCCAAGGCCACCGTGGTCTG...CAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS TCA 90 bp TGTTTTTCAATCGGCAAGCCATTGAGTCTCCATTTGATTGTGGGTTaGGGTTCGCCTTCTGCTTCACACAACAAGATGCCACTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: CFSIGKPLSLHLIVG*GSPSASHNKMPLLP
Trigger: GGGGAGCAGTGGCATCTTGTTGTGTGAAGCAGAAGGCGAACCTCAACCCACAATCAAATGGAGACTCAATGGCTTGCCGATTGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CCA 90 bp ATTGTTGCTCTTCCCTCTGGTAATTCACTACCTGGTTTGCTCCACTaGATATGTGGAGTTGGTAGGCCCTCCGCAAAACACTCGAGCAAT +
Preference number: 5 (lower is better)
Translates to: IVALPSGNSLPGLLH*ICGVGRPSAKHSSN
Trigger: ATTGCTCGAGTGTTTTGCGGAGGGCCTACCAACTCCACATATCCAGTGGAGCAAACCAGGTAGTGAATTACCAGAGGGAAGAGCAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp TTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAGGTGGGAGGCCTTTaGGAGGGTTGCAGGGTAAGA +
Preference number: 5 (lower is better)
Translates to: FHQNCRISTSGHAFPLLCKVGGL*EGCRVR
Trigger: TCTTACCCTGCAACCCTCCAAAAGGCCTCCCACCTT...ACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp TCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGGGCCAAACGTCCAAGTTTCAAGGTGGGAGGCCTTTaGGAGGGTTGCAGGGTAAGA +
Preference number: 5 (lower is better)
Translates to: SQKSFVPLSTLWAKRPSFKVGGL*EGCRVR
Trigger: TCTTACCCTGCAACCCTCCAAAAGGCCTCCCACCTT...GAAACTTGGACGTTTGGCCCAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS GCA 90 bp GAACTTCAATTGTTGCTCTTCCCTCTGGTAATTCACTACCTGGTTTaGTCCACTGGATATGTGGAGTTGGTAGGCCCTCCGCAAAACACT +
Preference number: 5 (lower is better)
Translates to: ELQLLLFPLVIHYLV*STGYVELVGPPQNT
Trigger: AGTGTTTTGCGGAGGGCCTACCAACTCCACATATCCAGTGGAGCAAACCAGGTAGTGAATTACCAGAGGGAAGAGCAACAATTGAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp ACTTATCTCACTATAGGAACACTAGGGTACATCTACTATCACAGACCACAAACCCAGACCACGGTGGCCTaGGGAGAAGCAAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: TYLTIGTLGYIYYHRPQTQTTVA*GEAKYS
Trigger: CGAGTACTTTGCTTCTCCCAAGGCCACCGTGGTCTG...GGTTTGTGGTCTGTGATAGTAGATGTACCCTAGTGTTCCTATAGTGAGATAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CAA 90 bp CAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAGGGACCGAAGGCTTCCCTaGAGAGGTTTTTCATCACTG +
Preference number: 5 (lower is better)
Translates to: QNCRISTSGHAFPLLCKRDRRLP*RGFSSL
Trigger: CAGTGATGAAAAACCTCTCAAGGGAAGCCTTCGGTC...CCTTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS TCA 90 bp TCTCTGTGGGCTGCATGTTCCTATTCAGGGACCGAAGGCTTCCCTTaGGAGGTTTTTCATCACTGTCGCTGTATTCACCAAAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: SLWAACSYSGTEGFP*EVFHHCRCIHQKFH
Trigger: ATGAAACTTTTGGTGAATACAGCGACAGTGATGAAAAACCTCTCAAGGGAAGCCTTCGGTCCCTGAATAGGAACATGCAGCCCACAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS GCA 90 bp ACTTCCATTGCTTTCAACGGATCCCTTCTCCTTAGCTCCAGTGTATaGGCCAATAAACGATCCATCTTCGTTGAATATGGACTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: TSIAFNGSLLLSSSV*ANKRSIFVEYGLVS
Trigger: GGAGACCAGTCCATATTCAACGAAGATGGATCGTTTATTGGCGCATACACTGGAGCTAAGGAGAAGGGATCCGTTGAAAGCAATGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS CCA 90 bp CCAGTGTATGCGCCAATAAACGATCCATCTTCGTTGAATATGGACTaGTCTCCCTCTCCATATTCCACTAAACTGTCAGCACTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: PVYAPINDPSSLNMD*SPSPYSTKLSALSV
Trigger: CACAGAGAGTGCTGACAGTTTAGTGGAATATGGAGAGGGAGACCAGTCCATATTCAACGAAGATGGATCGTTTATTGGCGCATACACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp AAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCAAGGTGGGAGGCCTTTaGGAGGGTTGCAGGGTAAGA +
Preference number: 5 (lower is better)
Translates to: KAVLFLSSKLQNINLWTRKVGGL*EGCRVR
Trigger: TCTTACCCTGCAACCCTCCAAAAGGCCTCCCACCTT...GCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp AGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGGCCATTTGATTGTGGGTaGAGGTTCGCCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SSSLLSSQKSFVPLSTLWPFDCG*RFAFCF
Trigger: GAAGCAGAAGGCGAACCTCAACCCACAATCAAATGG...CCAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp GAAAGAGAGCCAACATCCCTTTTAAGAAGAAGAGAAGTGGTTATGATCTCTGTTCAGACCACGGTGGCCTaGGGAGAAGCAAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: EREPTSLLRRREVVMISVQTTVA*GEAKYS
Trigger: CGAGTACTTTGCTTCTCCCAAGGCCACCGTGGTCTG...AACAGAGATCATAACCACTTCTCTTCTTCTTAAAAGGGATGTTGGCTCTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp ATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAATGTTCTGGGGATTCTaGTCTGGAGCTGCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: IKIAEYQPLDTRFRSCVKMFWGF*SGAAGG
Trigger: TCCACCAGCAGCTCCAGACAAGAATCCCCAGAACAT...TTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp ATTGACATTCTAAGGAATGGCAGTTTCAGTTCAGCTCCTCACTCCTTTCATCACATGTTCTGGGGATTCTaGTCTGGAGCTGCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: IDILRNGSFSSAPHSFHHMFWGF*SGAAGG
Trigger: TCCACCAGCAGCTCCAGACAAGAATCCCCAGAACAT...GTGATGAAAGGAGTGAGGAGCTGAACTGAAACTGCCATTCCTTAGAATGTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp AGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGGCTTGGGTTGAGATGCTaGAACTCTGATGTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: SSSLLSSQKSFVPLSTLWLGLRC*NSDVLG
Trigger: CCCCAGAACATCAGAGTTCAAGCATCTCAACCCAAG...CCAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp TTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAGACCGAAGGCTTCCCTaGAGAGGTTTTTCATCACTG +
Preference number: 5 (lower is better)
Translates to: FIKIAEYQPLDTRFRSCVDRRLP*RGFSSL
Trigger: CAGTGATGAAAAACCTCTCAAGGGAAGCCTTCGGTC...TACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS GCA 90 bp TATTCATCCAATAGATGTGCAAAGGTGGGAGGCCTTTTGGAGGGTTaGAGGGTAAGACAATGGAATCCCCTTCTTCTACATCAATGGGTT +
Preference number: 5 (lower is better)
Translates to: YSSNRCAKVGGLLEG*RVRQWNPLLLHQWV
Trigger: AACCCATTGATGTAGAAGAAGGGGATTCCATTGTCTTACCCTGCAACCCTCCAAAAGGCCTCCCACCTTTGCACATCTATTGGATGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp AATTGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACACCATTTGATTGTGGGTaGAGGTTCGCCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: NCASREKPTHLSNINAHTPFDCG*RFAFCF
Trigger: GAAGCAGAAGGCGAACCTCAACCCACAATCAAATGG...TGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CAA 90 bp CAGGTAGATGTGGAGTATCTGAAATGGGAACTTTGGATTCAGTCAAAGTGGATCTCGCTGATTTTGCTGTaGTGGTCATCTCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: QVDVEYLKWELWIQSKWISLILL*WSSPAS
Trigger: GGAAGCAGGAGATGACCACAACAGCAAAATCAGCGA...GATCCACTTTGACTGAATCCAAAGTTCCCATTTCAGATACTCCACATCTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CAA 90 bp TCAGTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCGCTGATTTTGCTGTaGTGGTCATCTCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: SVQLLTPFITEVFCSFIHSLILL*WSSPAS
Trigger: GGAAGCAGGAGATGACCACAACAGCAAAATCAGCGA...GTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp ATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAACTTGGGTTGAGATGCTaGAACTCTGATGTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: IKIAEYQPLDTRFRSCVKLGLRC*NSDVLG
Trigger: CCCCAGAACATCAGAGTTCAAGCATCTCAACCCAAG...TTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTCTTGGGTTGAGATGCTaGAACTCTGATGTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRLGLRC*NSDVLG
Trigger: CCCCAGAACATCAGAGTTCAAGCATCTCAACCCAAG...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp GGTTATGATCTCTGTTTACCAAACTGTCCACAGGCACTGGCCTCAGATATCAGGCCATCCAACAGGCTTTaGGTTTTCCACCAATTTATC +
Preference number: 5 (lower is better)
Translates to: GYDLCLPNCPQALASDIRPSNRL*VFHQFI
Trigger: GATAAATTGGTGGAAAACCAAAAGCCTGTTGGATGG...CCTGATATCTGAGGCCAGTGCCTGTGGACAGTTTGGTAAACAGAGATCATAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp GTTATGATCTCTGTTTACCAAACTGTCCACAGGCACTGGCCTCAGATATCAGGTCTTGAGAAAACTTGGTaGTTCAGGTACTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: VMISVYQTVHRHWPQISGLEKTW*FRYSFW
Trigger: CCAGAAGGAGTACCTGAACAACCAAGTTTTCTCAAG...ACCTGATATCTGAGGCCAGTGCCTGTGGACAGTTTGGTAAACAGAGATCATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp ATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCGACCGAAGGCTTCCCTaGAGAGGTTTTTCATCACTG +
Preference number: 5 (lower is better)
Translates to: ISFIKIAEYQPLDTRFRSDRRLP*RGFSSL
Trigger: CAGTGATGAAAAACCTCTCAAGGGAAGCCTTCGGTC...GGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp TTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGGTGGGAAGGTGGCAGTaGAACTTCCATTGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: FFHQNCRISTSGHAFPLLVGRWQ*NFHCFQ
Trigger: TTGAAAGCAATGGAAGTTCAACTGCCACCTTCCCAC...CAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp CCACAGGCACTGGCCTCAGATATCAGGTCTGCTAGGAAGAAAACAGCAATAGATAAGTTTGGGTTTCCTTaGCTTGATGGAATTTGCCTG +
Preference number: 5 (lower is better)
Translates to: PQALASDIRSARKKTAIDKFGFP*LDGICL
Trigger: CAGGCAAATTCCATCAAGCAAAGGAAACCCAAACTT...ATCTATTGCTGTTTTCTTCCTAGCAGACCTGATATCTGAGGCCAGTGCCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS GCA 90 bp GGATTTCAAAGGCTCCCATTTTATAATCATTTCCTTGGGTTGAGATaGTTGAACTCTGATGTTCTGGGGATTCTTGTCTGGAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GFQRLPFYNHFLGLR*LNSDVLGILVWSCW
Trigger: CCAGCAGCTCCAGACAAGAATCCCCAGAACATCAGAGTTCAAGCATCTCAACCCAAGGAAATGATTATAAAATGGGAGCCTTTGAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp CACACTGAACAGGAGAGCCAGGTAGATGTGGAGTATCTGAAATGGGAACTTTGGCAATCGTTCTTAATTTaGGAAATGCAGCGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: HTEQESQVDVEYLKWELWQSFLI*EMQRSN
Trigger: GTTGCTTCGCTGCATTTCCAAAATTAAGAACGATTG...CCAAAGTTCCCATTTCAGATACTCCACATCTACCTGGCTCTCCTGTTCAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CAA 90 bp ATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCGGAGGCAACAGAAGTTaGGGTTTCCTTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: ISFIKIAEYQPLDTRFRSGGNRS*GFLCLM
Trigger: CATCAAGCAAAGGAAACCCAAACTTCTGTTGCCTCC...GGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp GCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCGCTGATTTTGCTGTaGTGGTCATCTCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: AVLFLSSKLQNINLWTRVSLILL*WSSPAS
Trigger: GGAAGCAGGAGATGACCACAACAGCAAAATCAGCGA...AACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp TTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAATGTACTCGCTGATTTaGCTGTTGTGGTCATCTCCT +
Preference number: 5 (lower is better)
Translates to: FIKIAEYQPLDTRFRSCVMYSLI*LLWSSP
Trigger: AGGAGATGACCACAACAGCAAAATCAGCGAGTACAT...TACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp CTAAGGAATGGCAGTTTCAGTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTATGTACTCGCTGATTTaGCTGTTGTGGTCATCTCCT +
Preference number: 5 (lower is better)
Translates to: LRNGSFSSAPHSFHHRSLMYSLI*LLWSSP
Trigger: AGGAGATGACCACAACAGCAAAATCAGCGAGTACAT...AAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAACTGAAACTGCCATTCCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp CAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTATGTTCTGGGGATTCTaGTCTGGAGCTGCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: QCYFFHQNCRISTSGHAFMFWGF*SGAAGG
Trigger: TCCACCAGCAGCTCCAGACAAGAATCCCCAGAACAT...AAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp AGAAGTGGTTATGATCTCTGTTTACCAAACTGTCCACAGGCACTGGCCTCAGATTATTTTGTTGTTGAGTaGAGGTTGGAGAGATGCCAG +
Preference number: 5 (lower is better)
Translates to: RSGYDLCLPNCPQALASDYFVVE*RLERCQ
Trigger: CTGGCATCTCTCCAACCTCAACTCAACAACAAAATA...ATCTGAGGCCAGTGCCTGTGGACAGTTTGGTAAACAGAGATCATAACCACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp CAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAGGTCCAATAAACCAGCCTaGAGTGGAGATGTCATCATA +
Preference number: 5 (lower is better)
Translates to: QNCRISTSGHAFPLLCKRSNKPA*SGDVII
Trigger: TATGATGACATCTCCACTCAAGGCTGGTTTATTGGA...CCTTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTGCAGTTGAACTTCCATaGCTTTCAACGGATCCCTTC +
Preference number: 5 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRAVELP*LSTDPF
Trigger: GAAGGGATCCGTTGAAAGCAATGGAAGTTCAACTGC...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp TTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGGGAAGGTGGCAGTaGAACTTCCATTGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: FLSSKLQNINLWTRVSAPVGRWQ*NFHCFQ
Trigger: TTGAAAGCAATGGAAGTTCAACTGCCACCTTCCCAC...AGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS TCA 90 bp TTGAAAGTGAGAGATGTGGCCCTCATTTGGGATCTTGAATGTGCCTaGATTGTTAGCCGCAATTATCCGAGGATCAGAAAGATCAAAAGG +
Preference number: 5 (lower is better)
Translates to: LKVRDVALIWDLECA*IVSRNYPRIRKIKR
Trigger: CCTTTTGATCTTTCTGATCCTCGGATAATTGCGGCTAACAATTCAGGCACATTCAAGATCCCAAATGAGGGCCACATCTCTCACTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000204321.2
CDS GCA 90 bp ATATGGTCAGGTAAGCTCCGTCAATCACTATTCTGCCATCTTCTGTaGCATTCATCTCAAAAGCTTCTCCATCTTTACTCCAGGACAACT +
Preference number: 5 (lower is better)
Translates to: IWSGKLRQSLFCHLL*HSSQKLLHLYSRTT
Trigger: AGTTGTCCTGGAGTAAAGATGGAGAAGCTTTTGAGATGAATGGCACAGAAGATGGCAGAATAGTGATTGACGGAGCTTACCTGACCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CCA 90 bp TGTGTCCTTCCATCCAACAGGCTTTTGGTTTTCCACCAATTTATCTaGTACCCTCTTAGAAGTCCGTGTACTGTTTCCTTAGGAATGGAT +
Preference number: 5 (lower is better)
Translates to: CVLPSNRLLVFHQFI*YPLRSPCTVSLGMD
Trigger: ATCCATTCCTAAGGAAACAGTACACGGACTTCTAAGAGGGTACCAGATAAATTGGTGGAAAACCAAAAGCCTGTTGGATGGAAGGACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp TTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGACTGCTTTACAATTGTaGGAACCTGTTGAACGGAGA +
Preference number: 5 (lower is better)
Translates to: FFHQNCRISTSGHAFPLLTALQL*EPVERR
Trigger: TCTCCGTTCAACAGGTTCCAACAATTGTAAAGCAGT...CAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp ATTGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACACATGACTGCTTTACAATaGTTGGAACCTGTTGAACGG +
Preference number: 5 (lower is better)
Translates to: IVHPERNPHILATSMHTHMTALQ*LEPVER
Trigger: CCGTTCAACAGGTTCCAACAATTGTAAAGCAGTCAT...GTGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CAA 90 bp GTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTGTACAGATCTCCTCTTaGGCTCATGTATACTCTCTC +
Preference number: 5 (lower is better)
Translates to: VQLLTPFITEVFCSFIHSVQISS*AHVYSL
Trigger: GAGAGAGTATACATGAGCCAAAGAGGAGATCTGTAC...AGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp AGAAGTGGTTATGATCTCTGTTTACCAAACTGTCCACAGGCACTGGCCTCAGATCAATCGTTCTTAATTTaGGAAATGCAGCGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: RSGYDLCLPNCPQALASDQSFLI*EMQRSN
Trigger: GTTGCTTCGCTGCATTTCCAAAATTAAGAACGATTG...ATCTGAGGCCAGTGCCTGTGGACAGTTTGGTAAACAGAGATCATAACCACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp CAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAGGTTGGGTTTCCTTTGCTaGATGGAATTTGAACTGTTC +
Preference number: 5 (lower is better)
Translates to: QNCRISTSGHAFPLLCKRLGFLC*MEFELF
Trigger: GAACAGTTCAAATTCCATCAAGCAAAGGAAACCCAA...CCTTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp GCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTGGAGGCAACAGAAGTTaGGGTTTCCTTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: AVLFLSSKLQNINLWTRVGGNRS*GFLCLM
Trigger: CATCAAGCAAAGGAAACCCAAACTTCTGTTGCCTCC...AACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp CAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCATTTGATTGTGGGTaGAGGTTCGCCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: QCYFFHQNCRISTSGHAFPFDCG*RFAFCF
Trigger: GAAGCAGAAGGCGAACCTCAACCCACAATCAAATGG...AAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp CTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGACTATCAAGAGAAGTTaGAGCAGAACAGGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: LSSKLQNINLWTRVSAPVTIKRS*SRTGVN
Trigger: GTTTACTCCTGTTCTGCTCAAACTTCTCTTGATAGT...CACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp TTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGCCATCCAACAGGCTTTaGGTTTTCCACCAATTTATC +
Preference number: 5 (lower is better)
Translates to: FFHQNCRISTSGHAFPLLPSNRL*VFHQFI
Trigger: GATAAATTGGTGGAAAACCAAAAGCCTGTTGGATGG...CAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp ATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCCTTGAGAAAACTTGGTaGTTCAGGTACTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: ISFIKIAEYQPLDTRFRSLEKTW*FRYSFW
Trigger: CCAGAAGGAGTACCTGAACAACCAAGTTTTCTCAAG...GGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp ATTGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACACTATTTTGTTGTTGAGTaGAGGTTGGAGAGATGCCAG +
Preference number: 5 (lower is better)
Translates to: IVHPERNPHILATSMHTHYFVVE*RLERCQ
Trigger: CTGGCATCTCTCCAACCTCAACTCAACAACAAAATA...GTGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp CAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAAGGTACAGGGTGAATCTTTaGGGTAACATTTACTCCTTC +
Preference number: 5 (lower is better)
Translates to: QNCRISTSGHAFPLLCKRYRVNL*GNIYSF
Trigger: GAAGGAGTAAATGTTACCCAAAAGATTCACCCTGTA...CCTTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp AAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGCAGTTGAACTTCCATaGCTTTCAACGGATCCCTTC +
Preference number: 5 (lower is better)
Translates to: KAVLFLSSKLQNINLWTRAVELP*LSTDPF
Trigger: GAAGGGATCCGTTGAAAGCAATGGAAGTTCAACTGC...GCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS TCA 90 bp TTCAATTTGAAAATACTCATCGAAGGGAAAGGCCACCTGCACGTATaGCTGCTTTACAATTGTTGGAACCTGTTGAACGGAGAGTGGTAT +
Preference number: 5 (lower is better)
Translates to: FNLKILIEGKGHLHV*LLYNCWNLLNGEWY
Trigger: ATACCACTCTCCGTTCAACAGGTTCCAACAATTGTAAAGCAGTCATACGTGCAGGTGGCCTTTCCCTTCGATGAGTATTTTCAAATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000204321.2
CDS GCA 90 bp ATCAAGAGAAGTTTGAGCAGAACAGGAGTAAACACCCTGATCTTCTaGTGTGATGTTAGATATGGTCAGGTAAGCTCCGTCAATCACTAT +
Preference number: 5 (lower is better)
Translates to: IKRSLSRTGVNTLIF*CDVRYGQVSSVNHY
Trigger: ATAGTGATTGACGGAGCTTACCTGACCATATCTAACATCACAGCAGAAGATCAGGGTGTTTACTCCTGTTCTGCTCAAACTTCTCTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CCA 90 bp GAATGTTTACTTCTTTGGGATGTGTCCTTCCATCCAACAGGCTTTTaGTTTTCCACCAATTTATCTGGTACCCTCTTAGAAGTCCGTGTA +
Preference number: 5 (lower is better)
Translates to: ECLLLWDVSFHPTGF*FSTNLSGTLLEVRV
Trigger: TACACGGACTTCTAAGAGGGTACCAGATAAATTGGTGGAAAACCAAAAGCCTGTTGGATGGAAGGACACATCCCAAAGAAGTAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp GTTCAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTACTGCTTTACAATTGTaGGAACCTGTTGAACGGAGA +
Preference number: 5 (lower is better)
Translates to: VQLLTPFITEVFCSFIHSTALQL*EPVERR
Trigger: TCTCCGTTCAACAGGTTCCAACAATTGTAAAGCAGT...AGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp TTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGGTTCCGTGAATATTaGAGGCTTCACACTGATATA +
Preference number: 5 (lower is better)
Translates to: FFHQNCRISTSGHAFPLLWFREY*RLHTDI
Trigger: TATATCAGTGTGAAGCCTCAAATATTCACGGAACCA...CAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp TCTTTTGTTCCTTTATCCACTCTCTGGGCCAAACGTCCAAGTTTCCAAAGTGGAACTATCAAGAGAAGTTaGAGCAGAACAGGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: SFVPLSTLWAKRPSFQSGTIKRS*SRTGVN
Trigger: GTTTACTCCTGTTCTGCTCAAACTTCTCTTGATAGT...TCCACTTTGGAAACTTGGACGTTTGGCCCAGAGAGTGGATAAAGGAACAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp GCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTATGTACTCGCTGATTTaGCTGTTGTGGTCATCTCCT +
Preference number: 5 (lower is better)
Translates to: AVLFLSSKLQNINLWTRVMYSLI*LLWSSP
Trigger: AGGAGATGACCACAACAGCAAAATCAGCGAGTACAT...AACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp ATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCCCATCCAACAGGCTTTaGGTTTTCCACCAATTTATC +
Preference number: 5 (lower is better)
Translates to: ISFIKIAEYQPLDTRFRSPSNRL*VFHQFI
Trigger: GATAAATTGGTGGAAAACCAAAAGCCTGTTGGATGG...GGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTAGAATGTTTACTTCTTaGGGATGTGTCCTTCCATCC +
Preference number: 5 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRRMFTS*GCVLPS
Trigger: GGATGGAAGGACACATCCCAAAGAAGTAAACATTCT...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp ATTGACATTCTAAGGAATGGCAGTTTCAGTTCAGCTCCTCACTCCTTTCATCACAGAATGTTTACTTCTTaGGGATGTGTCCTTCCATCC +
Preference number: 5 (lower is better)
Translates to: IDILRNGSFSSAPHSFHHRMFTS*GCVLPS
Trigger: GGATGGAAGGACACATCCCAAAGAAGTAAACATTCT...GTGATGAAAGGAGTGAGGAGCTGAACTGAAACTGCCATTCCTTAGAATGTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp GCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTCTTGAGAAAACTTGGTaGTTCAGGTACTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: AVLFLSSKLQNINLWTRVLEKTW*FRYSFW
Trigger: CCAGAAGGAGTACCTGAACAACCAAGTTTTCTCAAG...AACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp TATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTTGAGAAAACTTGGTaGTTCAGGTACTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: YFFHQNCRISTSGHAFPLLEKTW*FRYSFW
Trigger: CCAGAAGGAGTACCTGAACAACCAAGTTTTCTCAAG...GAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp AGTGGTTATGATCTCTGTTTACCAAACTGTCCACAGGCACTGGCCTCAGATATCGATGGAGTAGTAACGTaGATTTCATTTAACTCTCCA +
Preference number: 5 (lower is better)
Translates to: SGYDLCLPNCPQALASDIDGVVT*ISFNSP
Trigger: TGGAGAGTTAAATGAAATCAACGTTACTACTCCATC...GATATCTGAGGCCAGTGCCTGTGGACAGTTTGGTAAACAGAGATCATAACCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp AAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCATGACTGCTTTACAATaGTTGGAACCTGTTGAACGG +
Preference number: 5 (lower is better)
Translates to: KAVLFLSSKLQNINLWTRMTALQ*LEPVER
Trigger: CCGTTCAACAGGTTCCAACAATTGTAAAGCAGTCAT...GCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp ATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCCAATCGTTCTTAATTTaGGAAATGCAGCGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: ISFIKIAEYQPLDTRFRSQSFLI*EMQRSN
Trigger: GTTGCTTCGCTGCATTTCCAAAATTAAGAACGATTG...GGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp AATTGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCACACACATCACAGTCAGTTTCATaGGCATTTTCTGTACAATCG +
Preference number: 5 (lower is better)
Translates to: NCASREKPTHLSNINAHTSQSVS*AFSVQS
Trigger: CGATTGTACAGAAAATGCCAATGAAACTGACTGTGA...TGTGTGTGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CAA 90 bp TTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTTCACAGTCAGTTTCATaGGCATTTTCTGTACAATCG +
Preference number: 5 (lower is better)
Translates to: FLSSKLQNINLWTRVSAPSQSVS*AFSVQS
Trigger: CGATTGTACAGAAAATGCCAATGAAACTGACTGTGA...AGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp AGGAGAAACAAGGAGCGATTCTTAAGTAGAAGGGCTGGAGATTGTATAATAAATGGAGGCAACAGAAGTTaGGGTTTCCTTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: RRNKERFLSRRAGDCIINGGNRS*GFLCLM
Trigger: CATCAAGCAAAGGAAACCCAAACTTCTGTTGCCTCC...ATTTATTATACAATCTCCAGCCCTTCTACTTAAGAATCGCTCCTTGTTTCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp ATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTAAAATTTCATGAACTTCAATaGTTGCTCTTCCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: IKIAEYQPLDTRFRSCVKFHELQ*LLFPLV
Trigger: TACCAGAGGGAAGAGCAACAATTGAAGTTCATGAAA...TTTTACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp GAAACATCTATGAGGAGAAACAAGGAGCGATTCTTAAGTAGAAGGGCTGGAGATTTTCATGAACTTCAATaGTTGCTCTTCCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: ETSMRRNKERFLSRRAGDFHELQ*LLFPLV
Trigger: TACCAGAGGGAAGAGCAACAATTGAAGTTCATGAAA...ATCTCCAGCCCTTCTACTTAAGAATCGCTCCTTGTTTCTCCTCATAGATGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTGGTTCCGTGAATATTaGAGGCTTCACACTGATATA +
Preference number: 5 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRWFREY*RLHTDI
Trigger: TATATCAGTGTGAAGCCTCAAATATTCACGGAACCA...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp ACTTATCTCACTATAGGAACACTAGGGTACATCTACTATCACAGACCACAAACCAGAATGTTTACTTCTTaGGGATGTGTCCTTCCATCC +
Preference number: 5 (lower is better)
Translates to: TYLTIGTLGYIYYHRPQTRMFTS*GCVLPS
Trigger: GGATGGAAGGACACATCCCAAAGAAGTAAACATTCT...GGTTTGTGGTCTGTGATAGTAGATGTACCCTAGTGTTCCTATAGTGAGATAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CAA 90 bp TTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGTGTTCAACTTTGATGACCTaGAGAAAACTTGGTTGTTCA +
Preference number: 5 (lower is better)
Translates to: FHQNCRISTSGHAFPLLCSTLMT*RKLGCS
Trigger: TGAACAACCAAGTTTTCTCAAGGTCATCAAAGTTGA...ACACAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp CAGCTCCTCACTCCTTTCATCACAGAAGTCTTTTGTTCCTTTATCCACTCTCTGTCAACTTTGATGACCTaGAGAAAACTTGGTTGTTCA +
Preference number: 5 (lower is better)
Translates to: QLLTPFITEVFCSFIHSLSTLMT*RKLGCS
Trigger: TGAACAACCAAGTTTTCTCAAGGTCATCAAAGTTGA...CAGAGAGTGGATAAAGGAACAAAAGACTTCTGTGATGAAAGGAGTGAGGAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp TTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGGATGGAGTAGTAACGTaGATTTCATTTAACTCTCCA +
Preference number: 5 (lower is better)
Translates to: FFHQNCRISTSGHAFPLLDGVVT*ISFNSP
Trigger: TGGAGAGTTAAATGAAATCAACGTTACTACTCCATC...CAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp TATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCTATTTTGTTGTTGAGTaGAGGTTGGAGAGATGCCAG +
Preference number: 5 (lower is better)
Translates to: YFFHQNCRISTSGHAFPLYFVVE*RLERCQ
Trigger: CTGGCATCTCTCCAACCTCAACTCAACAACAAAATA...GAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp TTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTTTCCGCTCCTGCAAAAGTTTCATCTTTaGCTGACTGAACTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: FFHQNCRISTSGHAFPLLQKFHL*LTELLD
Trigger: ATCCAGAAGTTCAGTCAGCAAAAGATGAAACTTTTG...CAGGAGCGGAAACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp GATGCCTGTGGGCAAAACATATGCTTCATGTTTATTACTGCATTGGCTCTTTTGACTATCAAGAGAAGTTaGAGCAGAACAGGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: DACGQNICFMFITALALLTIKRS*SRTGVN
Trigger: GTTTACTCCTGTTCTGCTCAAACTTCTCTTGATAGT...CAAAAGAGCCAATGCAGTAATAAACATGAAGCATATGTTTTGCCCACAGGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CAA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTGATGGAGTAGTAACGTaGATTTCATTTAACTCTCCA +
Preference number: 5 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRDGVVT*ISFNSP
Trigger: TGGAGAGTTAAATGAAATCAACGTTACTACTCCATC...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp CAGAGAAAAACGGAAGGAAAAGCTAATAGGGTGAACCTGCTCCCATTACCTTTTCATATTCTCTCCCTCTaGTCTCAATTACATCTTGAA +
Preference number: 5 (lower is better)
Translates to: QRKTEGKANRVNLLPLPFHILSL*SQLHLE
Trigger: TTCAAGATGTAATTGAGACAAGAGGGAGAGAATATG...AAAAGGTAATGGGAGCAGGTTCACCCTATTAGCTTTTCCTTCCGTTTTTCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CAA 90 bp GAAAGAGAGCCAACATCCCTTTTAAGAAGAAGAGAAGTGGTTATGATCTCTGTTTCCAATAAACCAGCCTaGAGTGGAGATGTCATCATA +
Preference number: 5 (lower is better)
Translates to: EREPTSLLRRREVVMISVSNKPA*SGDVII
Trigger: TATGATGACATCTCCACTCAAGGCTGGTTTATTGGA...AACAGAGATCATAACCACTTCTCTTCTTCTTAAAAGGGATGTTGGCTCTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp AAGTATAATTGTGCATCCAGAGAGAAACCCACACATCTTAGCAACATCAATGCATCCAATAAACCAGCCTaGAGTGGAGATGTCATCATA +
Preference number: 5 (lower is better)
Translates to: KYNCASREKPTHLSNINASNKPA*SGDVII
Trigger: TATGATGACATCTCCACTCAAGGCTGGTTTATTGGA...TGCATTGATGTTGCTAAGATGTGTGGGTTTCTCTCTGGATGCACAATTATACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp GGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCGTCAAAAGTTTCATCTTTaGCTGACTGAACTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: GSAISFIKIAEYQPLDTRQKFHL*LTELLD
Trigger: ATCCAGAAGTTCAGTCAGCAAAAGATGAAACTTTTG...ACGCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp ATTGACATTCTAAGGAATGGCAGTTTCAGTTCAGCTCCTCACTCCTTTCATCACCAAAAGTTTCATCTTTaGCTGACTGAACTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: IDILRNGSFSSAPHSFHHQKFHL*LTELLD
Trigger: ATCCAGAAGTTCAGTCAGCAAAAGATGAAACTTTTG...GTGATGAAAGGAGTGAGGAGCTGAACTGAAACTGCCATTCCTTAGAATGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp ATAACCAGCTTGCTTGCTTACAATCTTTTATCCTGTAGTGAATCGAATTCACTAGCAGTTGAACTTCCATaGCTTTCAACGGATCCCTTC +
Preference number: 5 (lower is better)
Translates to: ITSLLAYNLLSCSESNSLAVELP*LSTDPF
Trigger: GAAGGGATCCGTTGAAAGCAATGGAAGTTCAACTGC...TAGTGAATTCGATTCACTACAGGATAAAAGATTGTAAGCAAGCAAGCTGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp ATAACCAGCTTGCTTGCTTACAATCTTTTATCCTGTAGTGAATCGAATTCACTAGTGGGAAGGTGGCAGTaGAACTTCCATTGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: ITSLLAYNLLSCSESNSLVGRWQ*NFHCFQ
Trigger: TTGAAAGCAATGGAAGTTCAACTGCCACCTTCCCAC...TAGTGAATTCGATTCACTACAGGATAAAAGATTGTAAGCAAGCAAGCTGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000205098.2
CDS TCA 90 bp TATCCGAGGATCAGAAAGATCAAAAGGCTTATCGTCCTTAGTCCATaGAAATATTGGTTCAGGGTTTCCTTTCGCTTCACATTCAATTTG +
Preference number: 5 (lower is better)
Translates to: YPRIRKIKRLIVLSP*KYWFRVSFRFTFNL
Trigger: CAAATTGAATGTGAAGCGAAAGGAAACCCTGAACCAATATTTTCATGGACTAAGGACGATAAGCCTTTTGATCTTTCTGATCCTCGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000204321.2
CDS CCA 90 bp CGACTGTCATTTTCTTCCACATTTGCAAAGTACAGATCTCCTCTTTaGCTCATGTATACTCTCTCATCTTGTTCAATGTGTTCTAACTCA +
Preference number: 5 (lower is better)
Translates to: RLSFSSTFAKYRSPL*LMYTLSSCSMCSNS
Trigger: TGAGTTAGAACACATTGAACAAGATGAGAGAGTATACATGAGCCAAAGAGGAGATCTGTACTTTGCAAATGTGGAAGAAAATGACAGTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp TTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGGTACAGATCTCCTCTTaGGCTCATGTATACTCTCTC +
Preference number: 5 (lower is better)
Translates to: FLKAVLFLSSKLQNINLWVQISS*AHVYSL
Trigger: GAGAGAGTATACATGAGCCAAAGAGGAGATCTGTAC...CCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp AAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGACACGCTCAACTTTGATGACCTaGAGAAAACTTGGTTGTTCA +
Preference number: 5 (lower is better)
Translates to: KAVLFLSSKLQNINLWTRSTLMT*RKLGCS
Trigger: TGAACAACCAAGTTTTCTCAAGGTCATCAAAGTTGA...GCGTGTCCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp ATAACCAGCTTGCTTGCTTACAATCTTTTATCCTGTAGTGAATCGAATTCACTAACTGCTTTACAATTGTaGGAACCTGTTGAACGGAGA +
Preference number: 5 (lower is better)
Translates to: ITSLLAYNLLSCSESNSLTALQL*EPVERR
Trigger: TCTCCGTTCAACAGGTTCCAACAATTGTAAAGCAGT...TAGTGAATTCGATTCACTACAGGATAAAAGATTGTAAGCAAGCAAGCTGGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CAA 90 bp AGGAGAAACAAGGAGCGATTCTTAAGTAGAAGGGCTGGAGATTGTATAATAAATTCACAGTCAGTTTCATaGGCATTTTCTGTACAATCG +
Preference number: 5 (lower is better)
Translates to: RRNKERFLSRRAGDCIINSQSVS*AFSVQS
Trigger: CGATTGTACAGAAAATGCCAATGAAACTGACTGTGA...ATTTATTATACAATCTCCAGCCCTTCTACTTAAGAATCGCTCCTTGTTTCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp TTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGTCCAATAAACCAGCCTaGAGTGGAGATGTCATCATA +
Preference number: 5 (lower is better)
Translates to: FLKAVLFLSSKLQNINLWSNKPA*SGDVII
Trigger: TATGATGACATCTCCACTCAAGGCTGGTTTATTGGA...CCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS-3UTR CAA 90 bp TTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGTTGGGTTTCCTTTGCTaGATGGAATTTGAACTGTTC +
Preference number: 5 (lower is better)
Translates to: FLKAVLFLSSKLQNINLWLGFLC*MEFELF
Trigger: GAACAGTTCAAATTCCATCAAGCAAAGGAAACCCAA...CCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp ATAACCAGCTTGCTTGCTTACAATCTTTTATCCTGTAGTGAATCGAATTCACTATTTCATGAACTTCAATaGTTGCTCTTCCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: ITSLLAYNLLSCSESNSLFHELQ*LLFPLV
Trigger: TACCAGAGGGAAGAGCAACAATTGAAGTTCATGAAA...TAGTGAATTCGATTCACTACAGGATAAAAGATTGTAAGCAAGCAAGCTGGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CAA 90 bp GAATTTTTAGAAACATCTATGAGGAGAAACAAGGAGCGATTCTTAAGTAGAAGGTGGTTCCGTGAATATTaGAGGCTTCACACTGATATA +
Preference number: 5 (lower is better)
Translates to: EFLETSMRRNKERFLSRRWFREY*RLHTDI
Trigger: TATATCAGTGTGAAGCCTCAAATATTCACGGAACCA...CCTTCTACTTAAGAATCGCTCCTTGTTTCTCCTCATAGATGTTTCTAAAAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS-3UTR CAA 90 bp ATAACCAGCTTGCTTGCTTACAATCTTTTATCCTGTAGTGAATCGAATTCACTATACAGGGTGAATCTTTaGGGTAACATTTACTCCTTC +
Preference number: 5 (lower is better)
Translates to: ITSLLAYNLLSCSESNSLYRVNL*GNIYSF
Trigger: GAAGGAGTAAATGTTACCCAAAAGATTCACCCTGTA...TAGTGAATTCGATTCACTACAGGATAAAAGATTGTAAGCAAGCAAGCTGGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066905.9
CDS-3UTR CAA 90 bp TTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGCATATTCTCTCCCTCTaGTCTCAATTACATCTTGAA +
Preference number: 5 (lower is better)
Translates to: FLKAVLFLSSKLQNINLWHILSL*SQLHLE
Trigger: TTCAAGATGTAATTGAGACAAGAGGGAGAGAATATG...CCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS-3UTR CAA 90 bp TTTTTGAAGGCAGTGCTATTTCTTTCATCAAAATTGCAGAATATCAACCTCTGGCAAAAGTTTCATCTTTaGCTGACTGAACTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: FLKAVLFLSSKLQNINLWQKFHL*LTELLD
Trigger: ATCCAGAAGTTCAGTCAGCAAAAGATGAAACTTTTG...CCAGAGGTTGATATTCTGCAATTTTGATGAAAGAAATAGCACTGCCTTCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS GCA 72 bp GAGGTTCGCCTTCTGCTTCACACAACAAGATGCCACTaGTCCCCGTGCTGTACACGGCACTCTGAGGCTTCT +
Preference number: 6 (lower is better)
Translates to: EVRLLLHTTRCH*SPCCTRHSEAS
Trigger: AGAAGCCTCAGAGTGCCGTGTACAGCACGGGGAGCAGTGGCATCTTGTTGTGTGAAGCAGAAGGCGAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS GCA 72 bp TGGGTTGAGGTTCGCCTTCTGCTTCACACAACAAGATaGCACTGCTCCCCGTGCTGTACACGGCACTCTGAG +
Preference number: 6 (lower is better)
Translates to: WVEVRLLLHTTR*HCSPCCTRHSE
Trigger: CTCAGAGTGCCGTGTACAGCACGGGGAGCAGTGGCATCTTGTTGTGTGAAGCAGAAGGCGAACCTCAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 90 bp TCTTCTTCCCACTCTTCGGGGGCTCCCTGGGGCTTCCAGCTCACTTaGTACTCCAGTCCTGGCCCATTCTGTTCCATGGATTTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: SSSHSSGAPWGFQLT*YSSPGPFCSMDFKG
Trigger: GCCTTTGAAATCCATGGAACAGAATGGGCCAGGACTGGAGTACAAAGTGAGCTGGAAGCCCCAGGGAGCCCCCGAAGAGTGGGAAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000205098.2
CDS CCA 72 bp GTGTCTCATCAGCCACTTCCCAGACCACGGTGGCCTTaGGAGAAGCAAAGTACTCGCAGTGTAAGAAAGCGC +
Preference number: 6 (lower is better)
Translates to: VSHQPLPRPRWP*EKQSTRSVRKR
Trigger: GCGCTTTCTTACACTGCGAGTACTTTGCTTCTCCCAAGGCCACCGTGGTCTGGGAAGTGGCTGATGAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CCA 72 bp GGGGATGTGTCTCATCAGCCACTTCCCAGACCACGGTaGCCTTGGGAGAAGCAAAGTACTCGCAGTGTAAGA +
Preference number: 6 (lower is better)
Translates to: GDVSHQPLPRPR*PWEKQSTRSVR
Trigger: TCTTACACTGCGAGTACTTTGCTTCTCCCAAGGCCACCGTGGTCTGGGAAGTGGCTGATGAGACACATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 72 bp TGTGTCTCATCAGCCACTTCCCAGACCACGGTGGCCTaGGGAGAAGCAAAGTACTCGCAGTGTAAGAAAGCG +
Preference number: 6 (lower is better)
Translates to: CVSSATSQTTVA*GEAKYSQCKKA
Trigger: CGCTTTCTTACACTGCGAGTACTTTGCTTCTCCCAAGGCCACCGTGGTCTGGGAAGTGGCTGATGAGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 72 bp CATGCCCGGAGTGGGAAGGTGGCAGTTGAACTTCCATaGCTTTCAACGGATCCCTTCTCCTTAGCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: HARSGKVAVELP*LSTDPFSLAPV
Trigger: CACTGGAGCTAAGGAGAAGGGATCCGTTGAAAGCAATGGAAGTTCAACTGCCACCTTCCCACTCCGGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS GCA 72 bp GAGTCTCCATTTGATTGTGGGTTGAGGTTCGCCTTCTaGTTCACACAACAAGATGCCACTGCTCCCCGTGCT +
Preference number: 6 (lower is better)
Translates to: ESPFDCGLRFAF*FTQQDATAPRA
Trigger: AGCACGGGGAGCAGTGGCATCTTGTTGTGTGAAGCAGAAGGCGAACCTCAACCCACAATCAAATGGAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS GCA 72 bp TTGTTGCTCTTCCCTCTGGTAATTCACTACCTGGTTTaGTCCACTGGATATGTGGAGTTGGTAGGCCCTCCG +
Preference number: 6 (lower is better)
Translates to: LLLFPLVIHYLV*STGYVELVGPP
Trigger: CGGAGGGCCTACCAACTCCACATATCCAGTGGAGCAAACCAGGTAGTGAATTACCAGAGGGAAGAGCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CCA 72 bp CTTCCCTCTGGTAATTCACTACCTGGTTTGCTCCACTaGATATGTGGAGTTGGTAGGCCCTCCGCAAAACAC +
Preference number: 6 (lower is better)
Translates to: LPSGNSLPGLLH*ICGVGRPSAKH
Trigger: GTGTTTTGCGGAGGGCCTACCAACTCCACATATCCAGTGGAGCAAACCAGGTAGTGAATTACCAGAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CCA 72 bp GGAGCCAAAGATAACACGACATCTGTTTCTTCTCCCTaGACTCTAGTTAGCTCCTCCCACTTTCCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: GAKDNTTSVSSP*TLVSSSHFPGS
Trigger: GGAGCCTGGAAAGTGGGAGGAGCTAACTAGAGTCCAGGGAGAAGAAACAGATGTCGTGTTATCTTTGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CCA 72 bp CCTCTCCATATTCCACTAAACTGTCAGCACTCTCTGTaGGCTGCATGTTCCTATTCAGGGACCGAAGGCTTC +
Preference number: 6 (lower is better)
Translates to: PLHIPLNCQHSL*AACSYSGTEGF
Trigger: GAAGCCTTCGGTCCCTGAATAGGAACATGCAGCCCACAGAGAGTGCTGACAGTTTAGTGGAATATGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS CAA 90 bp GTTGGTAGGCCCTCCGCAAAACACTCGAGCAATAGTGTATCCCCTTaGAGTACAGTCTTTGCAGATAAACTTCCCATTTGGGCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: VGRPSAKHSSNSVSP*STVFADKLPIWAGG
Trigger: GCCTCCTGCCCAAATGGGAAGTTTATCTGCAAAGACTGTACTCAAAGGGGATACACTATTGCTCGAGTGTTTTGCGGAGGGCCTACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 72 bp ATTGTTGCTCTTCCCTCTGGTAATTCACTACCTGGTTaGCTCCACTGGATATGTGGAGTTGGTAGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: IVALPSGNSLPG*LHWICGVGRPS
Trigger: GGAGGGCCTACCAACTCCACATATCCAGTGGAGCAAACCAGGTAGTGAATTACCAGAGGGAAGAGCAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 72 bp GGCTGCATGTTCCTATTCAGGGACCGAAGGCTTCCCTaGAGAGGTTTTTCATCACTGTCGCTGTATTCACCA +
Preference number: 6 (lower is better)
Translates to: GCMFLFRDRRLP*RGFSSLSLYSP
Trigger: TGGTGAATACAGCGACAGTGATGAAAAACCTCTCAAGGGAAGCCTTCGGTCCCTGAATAGGAACATGCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS TCA 72 bp ATCGGCAAGCCATTGAGTCTCCATTTGATTGTGGGTTaGGGTTCGCCTTCTGCTTCACACAACAAGATGCCA +
Preference number: 6 (lower is better)
Translates to: IGKPLSLHLIVG*GSPSASHNKMP
Trigger: TGGCATCTTGTTGTGTGAAGCAGAAGGCGAACCTCAACCCACAATCAAATGGAGACTCAATGGCTTGCCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS TCA 72 bp GCTGCATGTTCCTATTCAGGGACCGAAGGCTTCCCTTaGGAGGTTTTTCATCACTGTCGCTGTATTCACCAA +
Preference number: 6 (lower is better)
Translates to: AACSYSGTEGFP*EVFHHCRCIHQ
Trigger: TTGGTGAATACAGCGACAGTGATGAAAAACCTCTCAAGGGAAGCCTTCGGTCCCTGAATAGGAACATGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS GCA 72 bp AATGTACTCGCTGATTTTGCTGTTGTGGTCATCTCCTaGTTCCCAGGACAGCCGGACACTTCTGTTTTGTCT +
Preference number: 6 (lower is better)
Translates to: NVLADFAVVVIS*FPGQPDTSVLS
Trigger: AGACAAAACAGAAGTGTCCGGCTGTCCTGGGAAGCAGGAGATGACCACAACAGCAAAATCAGCGAGTACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 72 bp AATCGGCAAGCCATTGAGTCTCCATTTGATTGTGGGTaGAGGTTCGCCTTCTGCTTCACACAACAAGATGCC +
Preference number: 6 (lower is better)
Translates to: NRQAIESPFDCG*RFAFCFTQQDA
Trigger: GGCATCTTGTTGTGTGAAGCAGAAGGCGAACCTCAACCCACAATCAAATGGAGACTCAATGGCTTGCCGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 72 bp CCTTCAAATTCTACAATGTACTCGCTGATTTTGCTGTaGTGGTCATCTCCTGCTTCCCAGGACAGCCGGACA +
Preference number: 6 (lower is better)
Translates to: PSNSTMYSLILL*WSSPASQDSRT
Trigger: TGTCCGGCTGTCCTGGGAAGCAGGAGATGACCACAACAGCAAAATCAGCGAGTACATTGTAGAATTTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 90 bp ACTCATCGAAGGGAAAGGCCACCTGCACGTATGACTGCTTTACAATaGTTGGAACCTGTTGAACGGAGAGTGGTATTTCAGCTGCTGACA +
Preference number: 6 (lower is better)
Translates to: THRRERPPARMTALQ*LEPVERRVVFQLLT
Trigger: TGTCAGCAGCTGAAATACCACTCTCCGTTCAACAGGTTCCAACAATTGTAAAGCAGTCATACGTGCAGGTGGCCTTTCCCTTCGATGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000204321.2
CDS CAA 90 bp ATGTTTTTCAATCGGCAAGCCATTGAGTCTCCATTTGATTGTGGGTaGAGGTTCGCCTTCTGCTTCACACAACAAGATGCCACTGCTCCC +
Preference number: 6 (lower is better)
Translates to: MFFNRQAIESPFDCG*RFAFCFTQQDATAP
Trigger: GGGAGCAGTGGCATCTTGTTGTGTGAAGCAGAAGGCGAACCTCAACCCACAATCAAATGGAGACTCAATGGCTTGCCGATTGAAAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 90 bp CTCCTAGGGTGGCACCTTCTTCACTTATTGGCTTTCCACAGCCTCTaGAGGTGCACGCCCTCAGGTAGAATTTGTATTTTGTTGTTGAGT +
Preference number: 6 (lower is better)
Translates to: LLGWHLLHLLAFHSL*RCTPSGRICILLLS
Trigger: ACTCAACAACAAAATACAAATTCTACCTGAGGGCGTGCACCTCAAGAGGCTGTGGAAAGCCAATAAGTGAAGAAGGTGCCACCCTAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000205098.2
CDS CAA 90 bp CTCTCTGTGGGCTGCATGTTCCTATTCAGGGACCGAAGGCTTCCCTaGAGAGGTTTTTCATCACTGTCGCTGTATTCACCAAAAGTTTCA +
Preference number: 6 (lower is better)
Translates to: LSVGCMFLFRDRRLP*RGFSSLSLYSPKVS
Trigger: TGAAACTTTTGGTGAATACAGCGACAGTGATGAAAAACCTCTCAAGGGAAGCCTTCGGTCCCTGAATAGGAACATGCAGCCCACAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS CAA 90 bp CATCGAAGGGAAAGGCCACCTGCACGTATGACTGCTTTACAATTGTaGGAACCTGTTGAACGGAGAGTGGTATTTCAGCTGCTGACAATT +
Preference number: 6 (lower is better)
Translates to: HRRERPPARMTALQL*EPVERRVVFQLLTI
Trigger: AATTGTCAGCAGCTGAAATACCACTCTCCGTTCAACAGGTTCCAACAATTGTAAAGCAGTCATACGTGCAGGTGGCCTTTCCCTTCGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000204321.2
CDS CAA 90 bp TCTCTGTTCCCTTCAAATTCTACAATGTACTCGCTGATTTTGCTGTaGTGGTCATCTCCTGCTTCCCAGGACAGCCGGACACTTCTGTTT +
Preference number: 6 (lower is better)
Translates to: SLFPSNSTMYSLILL*WSSPASQDSRTLLF
Trigger: AAACAGAAGTGTCCGGCTGTCCTGGGAAGCAGGAGATGACCACAACAGCAAAATCAGCGAGTACATTGTAGAATTTGAAGGGAACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS TCA 72 bp GGCACCTTCTTCACTTATTGGCTTTCCACAGCCTCTTaGGGTGCACGCCCTCAGGTAGAATTTGTATTTTGT +
Preference number: 6 (lower is better)
Translates to: GTFFTYWLSTAS*GARPQVEFVFC
Trigger: ACAAAATACAAATTCTACCTGAGGGCGTGCACCTCAAGAGGCTGTGGAAAGCCAATAAGTGAAGAAGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000205098.2
CDS GCA 72 bp AATAGATGTGCAAAGGTGGGAGGCCTTTTGGAGGGTTaGAGGGTAAGACAATGGAATCCCCTTCTTCTACAT +
Preference number: 6 (lower is better)
Translates to: NRCAKVGGLLEG*RVRQWNPLLLH
Trigger: ATGTAGAAGAAGGGGATTCCATTGTCTTACCCTGCAACCCTCCAAAAGGCCTCCCACCTTTGCACATCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 72 bp GAAAGGCCACCTGCACGTATGACTGCTTTACAATTGTaGGAACCTGTTGAACGGAGAGTGGTATTTCAGCTG +
Preference number: 6 (lower is better)
Translates to: ERPPARMTALQL*EPVERRVVFQL
Trigger: CAGCTGAAATACCACTCTCCGTTCAACAGGTTCCAACAATTGTAAAGCAGTCATACGTGCAGGTGGCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000204321.2
CDS CAA 72 bp AGGGAAAGGCCACCTGCACGTATGACTGCTTTACAATaGTTGGAACCTGTTGAACGGAGAGTGGTATTTCAG +
Preference number: 6 (lower is better)
Translates to: RERPPARMTALQ*LEPVERRVVFQ
Trigger: CTGAAATACCACTCTCCGTTCAACAGGTTCCAACAATTGTAAAGCAGTCATACGTGCAGGTGGCCTTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000204321.2
CDS CAA 72 bp TATTCATCCAATAGATGTGCAAAGGTGGGAGGCCTTTaGGAGGGTTGCAGGGTAAGACAATGGAATCCCCTT +
Preference number: 6 (lower is better)
Translates to: YSSNRCAKVGGL*EGCRVRQWNPL
Trigger: AAGGGGATTCCATTGTCTTACCCTGCAACCCTCCAAAAGGCCTCCCACCTTTGCACATCTATTGGATGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 72 bp TGGCACCTTCTTCACTTATTGGCTTTCCACAGCCTCTaGAGGTGCACGCCCTCAGGTAGAATTTGTATTTTG +
Preference number: 6 (lower is better)
Translates to: WHLLHLLAFHSL*RCTPSGRICIL
Trigger: CAAAATACAAATTCTACCTGAGGGCGTGCACCTCAAGAGGCTGTGGAAAGCCAATAAGTGAAGAAGGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000205098.2
CDS CAA 72 bp GCTCCAGTGTATGCGCCAATAAACGATCCATCTTCGTaGAATATGGACTGGTCTCCCTCTCCATATTCCACT +
Preference number: 6 (lower is better)
Translates to: APVYAPINDPSS*NMDWSPSPYST
Trigger: AGTGGAATATGGAGAGGGAGACCAGTCCATATTCAACGAAGATGGATCGTTTATTGGCGCATACACTGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS GCA 72 bp AGTTTGAGCAGAACAGGAGTAAACACCCTGATCTTCTaGTGTGATGTTAGATATGGTCAGGTAAGCTCCGTC +
Preference number: 6 (lower is better)
Translates to: SLSRTGVNTLIF*CDVRYGQVSSV
Trigger: GACGGAGCTTACCTGACCATATCTAACATCACAGCAGAAGATCAGGGTGTTTACTCCTGTTCTGCTCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS GCA 72 bp GCTTTCAACGGATCCCTTCTCCTTAGCTCCAGTGTATaGGCCAATAAACGATCCATCTTCGTTGAATATGGA +
Preference number: 6 (lower is better)
Translates to: AFNGSLLLSSSV*ANKRSIFVEYG
Trigger: TCCATATTCAACGAAGATGGATCGTTTATTGGCGCATACACTGGAGCTAAGGAGAAGGGATCCGTTGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS CCA 72 bp GCGCCAATAAACGATCCATCTTCGTTGAATATGGACTaGTCTCCCTCTCCATATTCCACTAAACTGTCAGCA +
Preference number: 6 (lower is better)
Translates to: APINDPSSLNMD*SPSPYSTKLSA
Trigger: TGCTGACAGTTTAGTGGAATATGGAGAGGGAGACCAGTCCATATTCAACGAAGATGGATCGTTTATTGGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS CAA 72 bp CCCTCCGCAAAACACTCGAGCAATAGTGTATCCCCTTaGAGTACAGTCTTTGCAGATAAACTTCCCATTTGG +
Preference number: 6 (lower is better)
Translates to: PSAKHSSNSVSP*STVFADKLPIW
Trigger: CCAAATGGGAAGTTTATCTGCAAAGACTGTACTCAAAGGGGATACACTATTGCTCGAGTGTTTTGCGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 72 bp CGCTCCCGGCACAAGTACCTCTACAGGGTGAATCTTTaGGGTAACATTTACTCCTTCTGTTATCTTCCTGAT +
Preference number: 6 (lower is better)
Translates to: RSRHKYLYRVNL*GNIYSFCYLPD
Trigger: ATCAGGAAGATAACAGAAGGAGTAAATGTTACCCAAAAGATTCACCCTGTAGAGGTACTTGTGCCGGGAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS CAA 90 bp CTAACTCAATATTCATCCAATAGATGTGCAAAGGTGGGAGGCCTTTaGGAGGGTTGCAGGGTAAGACAATGGAATCCCCTTCTTCTACAT +
Preference number: 6 (lower is better)
Translates to: LTQYSSNRCAKVGGL*EGCRVRQWNPLLLH
Trigger: ATGTAGAAGAAGGGGATTCCATTGTCTTACCCTGCAACCCTCCAAAAGGCCTCCCACCTTTGCACATCTATTGGATGAATATTGAGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 90 bp TTTCAAAGGCTCCCATTTTATAATCATTTCCTTGGGTTGAGATGCTaGAACTCTGATGTTCTGGGGATTCTTGTCTGGAGCTGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: FQRLPFYNHFLGLRC*NSDVLGILVWSCWW
Trigger: CCACCAGCAGCTCCAGACAAGAATCCCCAGAACATCAGAGTTCAAGCATCTCAACCCAAGGAAATGATTATAAAATGGGAGCCTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 90 bp TTCTCCTTAGCTCCAGTGTATGCGCCAATAAACGATCCATCTTCGTaGAATATGGACTGGTCTCCCTCTCCATATTCCACTAAACTGTCA +
Preference number: 6 (lower is better)
Translates to: FSLAPVYAPINDPSS*NMDWSPSPYSTKLS
Trigger: TGACAGTTTAGTGGAATATGGAGAGGGAGACCAGTCCATATTCAACGAAGATGGATCGTTTATTGGCGCATACACTGGAGCTAAGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS TCA 72 bp AAAATACTCATCGAAGGGAAAGGCCACCTGCACGTATaGCTGCTTTACAATTGTTGGAACCTGTTGAACGGA +
Preference number: 6 (lower is better)
Translates to: KILIEGKGHLHV*LLYNCWNLLNG
Trigger: TCCGTTCAACAGGTTCCAACAATTGTAAAGCAGTCATACGTGCAGGTGGCCTTTCCCTTCGATGAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000204321.2
CDS TCA 72 bp ATGCTATCGTTATCACCCCAATTCTTAGTCATTAGGTaGACAATATGTTCCGCTCCCGGCACAAGTACCTCT +
Preference number: 6 (lower is better)
Translates to: MLSLSPQFLVIR*TICSAPGTSTS
Trigger: AGAGGTACTTGTGCCGGGAGCGGAACATATTGTTCACCTAATGACTAAGAATTGGGGTGATAACGATAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS GCA 72 bp CTTCTTCACTTATTGGCTTTCCACAGCCTCTTGAGGTaGACGCCCTCAGGTAGAATTTGTATTTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: LLHLLAFHSLLR*TPSGRICILLL
Trigger: CAACAACAAAATACAAATTCTACCTGAGGGCGTGCACCTCAAGAGGCTGTGGAAAGCCAATAAGTGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000205098.2
CDS GCA 72 bp ATTTGGGCAGGAGGCAACAGAAGTTTGGGTTTCCTTTaGTTGATGGAATTTGCCTGGGAACAAATTTCTGTG +
Preference number: 6 (lower is better)
Translates to: IWAGGNRSLGFL*LMEFAWEQISV
Trigger: CACAGAAATTTGTTCCCAGGCAAATTCCATCAAGCAAAGGAAACCCAAACTTCTGTTGCCTCCTGCCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS CCA 72 bp CGTGAAAATCATGACTGGCTTTCCCCAACAAATTGTTaGCTGTACAGCGATAATTTCCTCTATCCTGGTAGG +
Preference number: 6 (lower is better)
Translates to: RENHDWLSPTNC*LYSDNFLYPGR
Trigger: CCTACCAGGATAGAGGAAATTATCGCTGTACAGCCAACAATTTGTTGGGGAAAGCCAGTCATGATTTTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 72 bp ATGTGGCCCTCATTTGGGATCTTGAATGTGCCTGAATaGTTAGCCGCAATTATCCGAGGATCAGAAAGATCA +
Preference number: 6 (lower is better)
Translates to: MWPSFGILNVPE*LAAIIRGSERS
Trigger: TGATCTTTCTGATCCTCGGATAATTGCGGCTAACAATTCAGGCACATTCAAGATCCCAAATGAGGGCCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000204321.2
CDS CAA 72 bp AGGCCCCAGGATAAGGTGGCAGTGTCTTTATCAACTTaGATGACCTTGAGAAAACTTGGTTGTTCAGGTACT +
Preference number: 6 (lower is better)
Translates to: RPQDKVAVSLST*MTLRKLGCSGT
Trigger: AGTACCTGAACAACCAAGTTTTCTCAAGGTCATCAAAGTTGATAAAGACACTGCCACCTTATCCTGGGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000205098.2
CDS CAA 90 bp GTCTTTGCAGATAAACTTCCCATTTGGGCAGGAGGCAACAGAAGTTaGGGTTTCCTTTGCTTGATGGAATTTGAACTGTTCACAGTCAGT +
Preference number: 6 (lower is better)
Translates to: VFADKLPIWAGGNRS*GFLCLMEFELFTVS
Trigger: ACTGACTGTGAACAGTTCAAATTCCATCAAGCAAAGGAAACCCAAACTTCTGTTGCCTCCTGCCCAAATGGGAAGTTTATCTGCAAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS GCA 72 bp ATTTGGGCAGGAGGCAACAGAAGTTTGGGTTTCCTTTaGTTGATGGAATTTGAACTGTTCACAGTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: IWAGGNRSLGFL*LMEFELFTVSF
Trigger: GAAACTGACTGTGAACAGTTCAAATTCCATCAAGCAAAGGAAACCCAAACTTCTGTTGCCTCCTGCCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS CCA 72 bp CCATCCAACAGGCTTTTGGTTTTCCACCAATTTATCTaGTACCCTCTTAGAAGTCCGTGTACTGTTTCCTTA +
Preference number: 6 (lower is better)
Translates to: PSNRLLVFHQFI*YPLRSPCTVSL
Trigger: TAAGGAAACAGTACACGGACTTCTAAGAGGGTACCAGATAAATTGGTGGAAAACCAAAAGCCTGTTGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000205098.2
CDS CCA 72 bp CTTCTTTGGGATGTGTCCTTCCATCCAACAGGCTTTTaGTTTTCCACCAATTTATCTGGTACCCTCTTAGAA +
Preference number: 6 (lower is better)
Translates to: LLWDVSFHPTGF*FSTNLSGTLLE
Trigger: TTCTAAGAGGGTACCAGATAAATTGGTGGAAAACCAAAAGCCTGTTGGATGGAAGGACACATCCCAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000205098.2
CDS CAA 72 bp GATAAACTTCCCATTTGGGCAGGAGGCAACAGAAGTTaGGGTTTCCTTTGCTTGATGGAATTTGAACTGTTC +
Preference number: 6 (lower is better)
Translates to: DKLPIWAGGNRS*GFLCLMEFELF
Trigger: GAACAGTTCAAATTCCATCAAGCAAAGGAAACCCAAACTTCTGTTGCCTCCTGCCCAAATGGGAAGTTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS CAA 72 bp ACTTCTTTGGGATGTGTCCTTCCATCCAACAGGCTTTaGGTTTTCCACCAATTTATCTGGTACCCTCTTAGA +
Preference number: 6 (lower is better)
Translates to: TSLGCVLPSNRL*VFHQFIWYPLR
Trigger: TCTAAGAGGGTACCAGATAAATTGGTGGAAAACCAAAAGCCTGTTGGATGGAAGGACACATCCCAAAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000205098.2
CDS CAA 90 bp TTCCATGGATTTCAAAGGCTCCCATTTTATAATCATTTCCTTGGGTaGAGATGCTTGAACTCTGATGTTCTGGGGATTCTTGTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: FHGFQRLPFYNHFLG*RCLNSDVLGILVWS
Trigger: GCTCCAGACAAGAATCCCCAGAACATCAGAGTTCAAGCATCTCAACCCAAGGAAATGATTATAAAATGGGAGCCTTTGAAATCCATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 90 bp AGAATGTTTACTTCTTTGGGATGTGTCCTTCCATCCAACAGGCTTTaGGTTTTCCACCAATTTATCTGGTACCCTCTTAGAAGTCCGTGT +
Preference number: 6 (lower is better)
Translates to: RMFTSLGCVLPSNRL*VFHQFIWYPLRSPC
Trigger: ACACGGACTTCTAAGAGGGTACCAGATAAATTGGTGGAAAACCAAAAGCCTGTTGGATGGAAGGACACATCCCAAAGAAGTAAACATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000205098.2
CDS CAA 90 bp AATATGTTCCGCTCCCGGCACAAGTACCTCTACAGGGTGAATCTTTaGGGTAACATTTACTCCTTCTGTTATCTTCCTGATACCTTTACT +
Preference number: 6 (lower is better)
Translates to: NMFRSRHKYLYRVNL*GNIYSFCYLPDTFT
Trigger: AGTAAAGGTATCAGGAAGATAACAGAAGGAGTAAATGTTACCCAAAAGATTCACCCTGTAGAGGTACTTGTGCCGGGAGCGGAACATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS CAA 90 bp CAGCGAAGCAACAGTAATCATTCCGACTGTCATTTTCTTCCACATTaGCAAAGTACAGATCTCCTCTTTGGCTCATGTATACTCTCTCAT +
Preference number: 6 (lower is better)
Translates to: QRSNSNHSDCHFLPH*QSTDLLFGSCILSH
Trigger: ATGAGAGAGTATACATGAGCCAAAGAGGAGATCTGTACTTTGCAAATGTGGAAGAAAATGACAGTCGGAATGATTACTGTTGCTTCGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 90 bp AGGAGATGTTTTCTATCTTCAATGTCTTTTCATGAACTTCAATTGTaGCTCTTCCCTCTGGTAATTCACTACCTGGTTTGCTCCACTGGA +
Preference number: 6 (lower is better)
Translates to: RRCFLSSMSFHELQL*LFPLVIHYLVCSTG
Trigger: TCCAGTGGAGCAAACCAGGTAGTGAATTACCAGAGGGAAGAGCAACAATTGAAGTTCATGAAAAGACATTGAAGATAGAAAACATCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS TCA 72 bp AATATTGGCATTGGCCAGAATGGTTCCGTGAATATTTaGGGCTTCACACTGATATACACCAGTATGATTTGG +
Preference number: 6 (lower is better)
Translates to: NIGIGQNGSVNI*GFTLIYTSMIW
Trigger: CCAAATCATACTGGTGTATATCAGTGTGAAGCCTCAAATATTCACGGAACCATTCTGGCCAATGCCAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 72 bp CAATATTGGCATTGGCCAGAATGGTTCCGTGAATATTaGAGGCTTCACACTGATATACACCAGTATGATTTG +
Preference number: 6 (lower is better)
Translates to: QYWHWPEWFREY*RLHTDIHQYDL
Trigger: CAAATCATACTGGTGTATATCAGTGTGAAGCCTCAAATATTCACGGAACCATTCTGGCCAATGCCAATATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
CDS CAA 72 bp CATCACTGTCGCTGTATTCACCAAAAGTTTCATCTTTaGCTGACTGAACTTCTGGATCTGGGTGTAAATCTT +
Preference number: 6 (lower is better)
Translates to: HHCRCIHQKFHL*LTELLDLGVNL
Trigger: AAGATTTACACCCAGATCCAGAAGTTCAGTCAGCAAAAGATGAAACTTTTGGTGAATACAGCGACAGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000205098.2
CDS TCA 72 bp CCAGCATATTCTCTCCCTCTTGTCTCAATTACATCTTaGAAAATGCTATCGTTATCACCCCAATTCTTAGTC +
Preference number: 6 (lower is better)
Translates to: PAYSLPLVSITS*KMLSLSPQFLV
Trigger: GACTAAGAATTGGGGTGATAACGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGGAGAGAATATGCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
CDS CCA 72 bp AGTGTCTTTATCAACTTTGATGACCTTGAGAAAACTTaGTTGTTCAGGTACTCCTTCTGGTGTCTGAAATAT +
Preference number: 6 (lower is better)
Translates to: SVFINFDDLEKT*LFRYSFWCLKY
Trigger: ATATTTCAGACACCAGAAGGAGTACCTGAACAACCAAGTTTTCTCAAGGTCATCAAAGTTGATAAAGACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3
ENSMUST00000205098.2
CDS CAA 72 bp AAACCATCTTCCTGTATTCACCAAAAGTTTCATCTTTaGCTGACTGAACTTCTGGATCTGGGTGTAAATCTT +
Preference number: 6 (lower is better)
Translates to: KPSSCIHQKFHL*LTELLDLGVNL
Trigger: AAGATTTACACCCAGATCCAGAAGTTCAGTCAGCAAAAGATGAAACTTTTGGTGAATACAGGAAGATGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203912.3
CDS CAA 90 bp TCACAGTCAGTTTCATTGGCATTTTCTGTACAATCGTTCTTAATTTaGGAAATGCAGCGAAGCAACAGTAATCATTCCGACTGTCATTTT +
Preference number: 6 (lower is better)
Translates to: SQSVSLAFSVQSFLI*EMQRSNSNHSDCHF
Trigger: AAAATGACAGTCGGAATGATTACTGTTGCTTCGCTGCATTTCCAAAATTAAGAACGATTGTACAGAAAATGCCAATGAAACTGACTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066905.9
ENSMUST00000203830.3
ENSMUST00000203912.3