Pregenerated sensors for CHIT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026450Ensembl transcript IDs: ENSMUST00000086475.3, ENSMUST00000159963.8, ENSMUST00000160060.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGCCAGCAGAGGCAGGTGGTaGGGGACCCCAAGCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: KGNQEADQRWGHGRNREASRGRW*GTPSLA Trigger: GGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCT...GGCCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| 3UTR-3UTR CCA 90 bp | GACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGCAGAGGCAGGTGGTaGGGGACCCCAAGCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: DKKETKKLIRGGGMEGTESRGRW*GTPSLA Trigger: GGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCT...CTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAAGCAGAGGCAGGTGGTaGGGGACCCCAAGCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RDKKETKKLIRGGGMEGTSRGRW*GTPSLA Trigger: GGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCT...TGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGGGGGGACCCCAAGCCTaGCCTCAGACTGGAGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: KKETKKLIRGGGMEGTERGGPQA*PQTGVG Trigger: TCCAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCC...CCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTT 56% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTTGGATGGCTCCCACGTCCACCTaGGAACTCCCAGTCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRGRWWGTPSLASDWSWMAPTST*ELPVKV Trigger: GACCTTGACTGGGAGTTCCCAGGTGGACGTGGGAGC...CATCCAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | AAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTTGGATGGAGGACAGCTCTGCTaGAACAGCCGCCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQRQVVGDPKPGLRLELDGGQLC*NSRPPP Trigger: TGGAGGAGGGCGGCTGTTCCAGCAGAGCTGTCCTCC...ATCCAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR GCA 90 bp | AAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTTGGATCAGAGTCATCACACCTaGCCAGGCCAGGGACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQRQVVGDPKPGLRLELDQSHHT*PGQGLH Trigger: GTGCAGTCCCTGGCCTGGGCAGGTGTGATGACTCTG...ATCCAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | CCAGGGAAAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGACCTCCTGGAAGGCTTTaGCCAAGTCCTGTATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGKAEAGGGGPQAWPQTGPPGRL*PSPVSG Trigger: CCCTGATACAGGACTTGGCCAAAGCCTTCCAGGAGG...TCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTTTCCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTTGGATGTCCTTCCCTGAGGACTaGGCTTCCTCCTGGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRGRWWGTPSLASDWSWMSFPED*ASSWKA Trigger: AGCCTTCCAGGAGGAAGCCCAGTCCTCAGGGAAGGA...CATCCAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR GCA 90 bp | AGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTTGGATGGTTTTGCTCAGCGGCTaGCCCACTTTCTCCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRGRWWGTPSLASDWSWMVLLSG*PTFSLP Trigger: AGGCAAGGAGAAAGTGGGGCAGCCGCTGAGCAAAAC...CATCCAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | AAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTTGGATGATCAGTTTGCTGGCTaGGGTCCCCTTCTGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQRQVVGDPKPGLRLELDDQFAG*GPLLQP Trigger: TGGCTGCAGAAGGGGACCCCAGCCAGCAAACTGATC...ATCCAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTTGGATGCAAGGATCAGTTTGCTaGCTGGGGTCCCCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRGRWWGTPSLASDWSWMQGSVC*LGSPSA Trigger: TGCAGAAGGGGACCCCAGCCAGCAAACTGATCCTTG...CATCCAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | CAGGGAAAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTCTAAACACCAGGCCTaGAGGACAGCTCTGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: QGKQRQVVGDPKPGLRLESKHQA*RTALLE Trigger: TTCCAGCAGAGCTGTCCTCCAGGCCTGGTGTTTAGA...CTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTTTCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR GCA 90 bp | AAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTTGGATTGCCAAGGATCAGTTTaGTGGCTGGGGTCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQRQVVGDPKPGLRLELDCQGSV*WLGSPS Trigger: AGAAGGGGACCCCAGCCAGCAAACTGATCCTTGGCA...ATCCAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | AAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTTGGATCCTCCTGGAAGGCTTTaGCCAAGTCCTGTATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQRQVVGDPKPGLRLELDPPGRL*PSPVSG Trigger: CCCTGATACAGGACTTGGCCAAAGCCTTCCAGGAGG...ATCCAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGCCGGGCACCAGGCCCTGTaGCTGGGGCCCCAACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGNQEADQRWGHGRNREAGHQAL*LGPQLH Trigger: ATGGAGTTGGGGCCCCAGCCACAGGGCCTGGTGCCC...GGCCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR TCA 90 bp | CAGGGAAAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGCCTGTATCAGGGCTGTaGATCTCTCTTTGTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: QGKQRQVVGDPKPGLRLEPVSGL*ISLCLL Trigger: CAGTAGACAAAGAGAGATTCACAGCCCTGATACAGG...CTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTTTCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | CCAGGGAAAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAATGTCTGTGAACTTCTaGGTACCAAAGGTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGKAEAGGGGPQAWPQTGMSVNF*VPKVQP Trigger: AGGCTGGACCTTTGGTACCCAGAAGTTCACAGACAT...TCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTTTCCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTTGGATGCTGTTCTGGGCTCCTTaGAGTCTCGGATGGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SRGRWWGTPSLASDWSWMLFWAP*SLGWKI Trigger: AATCTTCCATCCGAGACTCCAAGGAGCCCAGAACAG...CATCCAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTTGGATGAGGTATTATCTGTTCTaGGCTCCTTGGAGTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRGRWWGTPSLASDWSWMRYYLF*APWSLG Trigger: TCCGAGACTCCAAGGAGCCCAGAACAGATAATACCT...CATCCAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | GGAAAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTTGAGGTATTATCTGTTCTaGGCTCCTTGGAGTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKQRQVVGDPKPGLRLELRYYLF*APWSLG Trigger: TCCGAGACTCCAAGGAGCCCAGAACAGATAATACCT...CAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR GCA 90 bp | AAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGCCCAGAGTCATCACACCTaGCCAGGCCAGGGACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGNQEADQRWGHGRNREAQSHHT*PGQGLH Trigger: GTGCAGTCCCTGGCCTGGGCAGGTGTGATGACTCTG...GGCCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR GCA 90 bp | AAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGCCCCTGGGCTGGGTCCCTaGTCTGGCATAGAAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: KGNQEADQRWGHGRNREAPGLGP*SGIEDG Trigger: CCCATCTTCTATGCCAGAGCAGGGACCCAGCCCAGG...GGCCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | AGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGGGCACCAGGCCCTGTaGCTGGGGCCCCAACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RQKGNQEADQRWGHGRNRGHQAL*LGPQLH Trigger: ATGGAGTTGGGGCCCCAGCCACAGGGCCTGGTGCCC...TCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR CCA 90 bp | AGAGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGGGCACCAGGCCCTGTaGCTGGGGCCCCAACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RDKKETKKLIRGGGMEGTGHQAL*LGPQLH Trigger: ATGGAGTTGGGGCCCCAGCCACAGGGCCTGGTGCCC...TGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR TCA 90 bp | GACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGGAGGCGTTCCTTCCCTaGGGACTGGGCTTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: DKKETKKLIRGGGMEGTEEAFLP*GLGFLL Trigger: CAGGAGGAAGCCCAGTCCTCAGGGAAGGAACGCCTC...CTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR GCA 90 bp | GACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGGCTGGGGTCCCCTTCTaGAGCCAGAGCGTCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: DKKETKKLIRGGGMEGTEAGVPF*SQSVTA Trigger: TGCTGTGACGCTCTGGCTGCAGAAGGGGACCCCAGC...CTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGCCTCCTTCCCTGAGGACTaGGCTTCCTCCTGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KGNQEADQRWGHGRNREASFPED*ASSWKA Trigger: AGCCTTCCAGGAGGAAGCCCAGTCCTCAGGGAAGGA...GGCCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR CCA 90 bp | AAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGGGAGGACAGCTCTGCTaGAACAGCCGCCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKETKKLIRGGGMEGTERGGQLC*NSRPPP Trigger: TGGAGGAGGGCGGCTGTTCCAGCAGAGCTGTCCTCC...CCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR TCA 90 bp | AGAGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGGCGTTCCTTCCCTaGGGACTGGGCTTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RDKKETKKLIRGGGMEGTEAFLP*GLGFLL Trigger: CAGGAGGAAGCCCAGTCCTCAGGGAAGGAACGCCTC...TGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR GCA 90 bp | AAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGCCGTAGCAGACCAGTTTTaGAGCAGAGCCCCACTGGAC | + |
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Preference number: 4 (lower is better) Translates to: KGNQEADQRWGHGRNREAVADQF*SRAPLD Trigger: GTCCAGTGGGGCTCTGCTGCAAAACTGGTCTGCTAC...GGCCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR GCA 90 bp | AGAGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGCTGGGGTCCCCTTCTaGAGCCAGAGCGTCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: RDKKETKKLIRGGGMEGTAGVPF*SQSVTA Trigger: TGCTGTGACGCTCTGGCTGCAGAAGGGGACCCCAGC...TGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR GCA 90 bp | AAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGCCTGCCAAGGATCAGTTTaGTGGCTGGGGTCCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KGNQEADQRWGHGRNREACQGSV*WLGSPS Trigger: AGAAGGGGACCCCAGCCAGCAAACTGATCCTTGGCA...GGCCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGCCCAAGGATCAGTTTGCTaGCTGGGGTCCCCTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KGNQEADQRWGHGRNREAQGSVC*LGSPSA Trigger: TGCAGAAGGGGACCCCAGCCAGCAAACTGATCCTTG...GGCCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR GCA 90 bp | AGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGACCTGGGCTGGGTCCCTaGTCTGGCATAGAAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: RQKGNQEADQRWGHGRNRPGLGP*SGIEDG Trigger: CCCATCTTCTATGCCAGAGCAGGGACCCAGCCCAGG...TCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CCA 90 bp | AGAGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGCTCCCACGTCCACCTaGGAACTCCCAGTCAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: RDKKETKKLIRGGGMEGTAPTST*ELPVKV Trigger: GACCTTGACTGGGAGTTCCCAGGTGGACGTGGGAGC...TGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR CCA 90 bp | AAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGGACTGGGCTTCCTCCTaGAAGGCTTTGGCCAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: KKETKKLIRGGGMEGTERDWASS*KALAKS Trigger: GGACTTGGCCAAAGCCTTCCAGGAGGAAGCCCAGTC...CCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR CCA 90 bp | GACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGGACTGGGCTTCCTCCTaGAAGGCTTTGGCCAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: DKKETKKLIRGGGMEGTEDWASS*KALAKS Trigger: GGACTTGGCCAAAGCCTTCCAGGAGGAAGCCCAGTC...CTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR CCA 90 bp | AAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGTCCTTCCCTGAGGACTaGGCTTCCTCCTGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KKETKKLIRGGGMEGTERSFPED*ASSWKA Trigger: AGCCTTCCAGGAGGAAGCCCAGTCCTCAGGGAAGGA...CCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR CCA 90 bp | GACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGAGGGTACGGGCCCTaGTTGCAGAAGGAACCCTTG | + |
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Preference number: 4 (lower is better) Translates to: DKKETKKLIRGGGMEGTERGYGP*LQKEPL Trigger: CAAGGGTTCCTTCTGCAACCAGGGCCCGTACCCTCT...CTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR GCA 90 bp | AAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGGTAGCAGACCAGTTTTaGAGCAGAGCCCCACTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KKETKKLIRGGGMEGTERVADQF*SRAPLD Trigger: GTCCAGTGGGGCTCTGCTGCAAAACTGGTCTGCTAC...CCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR GCA 90 bp | AAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGGTTTTGCTCAGCGGCTaGCCCACTTTCTCCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: KKETKKLIRGGGMEGTERVLLSG*PTFSLP Trigger: AGGCAAGGAGAAAGTGGGGCAGCCGCTGAGCAAAAC...CCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS-3UTR GCA 90 bp | GACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGTGCCAAGGATCAGTTTaGTGGCTGGGGTCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DKKETKKLIRGGGMEGTECQGSV*WLGSPS Trigger: AGAAGGGGACCCCAGCCAGCAAACTGATCCTTGGCA...CTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CCA 90 bp | AGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGACTGGGCTTCCTCCTaGAAGGCTTTGGCCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQKGNQEADQRWGHGRNRDWASS*KALAKS Trigger: GGACTTGGCCAAAGCCTTCCAGGAGGAAGCCCAGTC...TCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CCA 90 bp | AGAGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGATCAGTTTGCTGGCTaGGGTCCCCTTCTGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RDKKETKKLIRGGGMEGTDQFAG*GPLLQP Trigger: TGGCTGCAGAAGGGGACCCCAGCCAGCAAACTGATC...TGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CCA 90 bp | AGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAAGAGGGTACGGGCCCTaGTTGCAGAAGGAACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RQKGNQEADQRWGHGRNRRGYGP*LQKEPL Trigger: CAAGGGTTCCTTCTGCAACCAGGGCCCGTACCCTCT...TCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGCCCTGTTCTGGGCTCCTTaGAGTCTCGGATGGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: KGNQEADQRWGHGRNREALFWAP*SLGWKI Trigger: AATCTTCCATCCGAGACTCCAAGGAGCCCAGAACAG...GGCCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGCCCCTGTATCAGGGCTGTaGATCTCTCTTTGTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: KGNQEADQRWGHGRNREAPVSGL*ISLCLL Trigger: CAGTAGACAAAGAGAGATTCACAGCCCTGATACAGG...GGCCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGATCACTCGGTACAGCTaGAGTCAGAAGGAGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KKETKKLIRGGGMEGTERITRYS*SQKEAF Trigger: GAACGCCTCCTTCTGACTGCAGCTGTACCGAGTGAT...CCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR GCA 90 bp | AGAGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGTTTTGCTCAGCGGCTaGCCCACTTTCTCCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RDKKETKKLIRGGGMEGTVLLSG*PTFSLP Trigger: AGGCAAGGAGAAAGTGGGGCAGCCGCTGAGCAAAAC...TGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGCCATGTCTGTGAACTTCTaGGTACCAAAGGTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGNQEADQRWGHGRNREAMSVNF*VPKVQP Trigger: AGGCTGGACCTTTGGTACCCAGAAGTTCACAGACAT...GGCCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CCA 90 bp | AGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGACCTCCTGGAAGGCTTTaGCCAAGTCCTGTATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQKGNQEADQRWGHGRNRPPGRL*PSPVSG Trigger: CCCTGATACAGGACTTGGCCAAAGCCTTCCAGGAGG...TCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CCA 90 bp | AGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGATCTAAACACCAGGCCTaGAGGACAGCTCTGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RQKGNQEADQRWGHGRNRSKHQA*RTALLE Trigger: TTCCAGCAGAGCTGTCCTCCAGGCCTGGTGTTTAGA...TCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR TCA 90 bp | AAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGCCTGTATCAGGGCTGTaGATCTCTCTTTGTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: KKETKKLIRGGGMEGTERPVSGL*ISLCLL Trigger: CAGTAGACAAAGAGAGATTCACAGCCCTGATACAGG...CCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGATGTCTGTGAACTTCTaGGTACCAAAGGTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DKKETKKLIRGGGMEGTEMSVNF*VPKVQP Trigger: AGGCTGGACCTTTGGTACCCAGAAGTTCACAGACAT...CTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CCA 90 bp | AGAGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACACAGACTGGAGTTGGATaGGGTTCCAGGAACTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RDKKETKKLIRGGGMEGTQTGVG*GSRNLA Trigger: AGCTAAGTTCCTGGAACCCCATCCAACTCCAGTCTG...TGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160060.8 |
||
| CDS-3UTR GCA 90 bp | AGAGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAAGACCCCATCAGCTTTaGCTTGGCTTTGAAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RDKKETKKLIRGGGMEGTRPHQL*LGFEAF Trigger: GAAAGCTTCAAAGCCAAGGCAAAGCTGATGGGGTCT...TGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160060.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGAAAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGGGTAGCAGACCAGTTTaGCAGCAGAGCCCCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QGKQRQVVGDPKPGLRLEGSRPV*QQSPTG Trigger: TCCAGTGGGGCTCTGCTGCAAAACTGGTCTGCTACC...CTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTTTCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGAAAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGGCTGTGAATCTCTCTTaGTCTACTGTGGGGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QGKQRQVVGDPKPGLRLEAVNLS*STVGLP Trigger: TGGGAGCCCCACAGTAGACAAAGAGAGATTCACAGC...CTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTTTCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CAA 90 bp | CCAGGGAAAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGATCTGTTCTGGGCTCCTaGGAGTCTCGGATGGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PGKAEAGGGGPQAWPQTGSVLGS*ESRMED Trigger: ATCTTCCATCCGAGACTCCAAGGAGCCCAGAACAGA...TCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTTTCCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS-3UTR CAA 90 bp | GGAAAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGTTGACGGCTAACAGGGTCTaGAGCTTGGGGTTCTTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GKQRQVVGDPKPGLRLELTANRV*SLGFLV Trigger: GACTAAGAACCCCAAGCTCAAGACCCTGTTAGCCGT...CAACTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
||
| CDS CCA 90 bp | AAGGTCTGCCGGTTGCTGGCGGTGGCCACCATGTCTGTGAACTTCTaGGTACCAAAGGTCCAGCCTCCAACGGCTAACAGGGTCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KVCRLLAVATMSVNF*VPKVQPPTANRVLS Trigger: GCTCAAGACCCTGTTAGCCGTTGGAGGCTGGACCTTTGGTACCCAGAAGTTCACAGACATGGTGGCCACCGCCAGCAACCGGCAGACCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGAAAGCAGAGGCAGGTGGTGGGGGACCCCAAGCCTGGCCTCAGACTGGAGCTCCAGGTACAACATTaGCAAGAGGCTCTAAACACC | + |
|
Preference number: 5 (lower is better) Translates to: QGKQRQVVGDPKPGLRLELQVQH*QEALNT Trigger: GGTGTTTAGAGCCTCTTGCAAATGTTGTACCTGGAG...CTCCAGTCTGAGGCCAGGCTTGGGGTCCCCCACCACCTGCCTCTGCTTTCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS TCA 90 bp | GGGCTTCCTCCTGGAAGGCTTTGGCCAAGTCCTGTATCAGGGCTGTaGATCTCTCTTTGTCTACTGTGGGGCTCCCACGTCCACCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLPPGRLWPSPVSGL*ISLCLLWGSHVHLG Trigger: TCCCAGGTGGACGTGGGAGCCCCACAGTAGACAAAGAGAGATTCACAGCCCTGATACAGGACTTGGCCAAAGCCTTCCAGGAGGAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS GCA 90 bp | AGTAAGTGGACTCGTCTCCAGGGTTGGGGTAGACCCCATCAGCTTTaGCTTGGCAGAAGTTATCTAGCCCTGGGCTGGGTCCCTGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SKWTRLQGWGRPHQL*LGRSYLALGWVPAL Trigger: CAGAGCAGGGACCCAGCCCAGGGCTAGATAACTTCTGCCAAGGCAAAGCTGATGGGGTCTACCCCAACCCTGGAGACGAGTCCACTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS CCA 90 bp | GAAAGAGCGTCCATAGGTAGGCATGCCAAGGATCAGTTTGCTGGCTaGGGTCCCCTTCTGCAGCCAGAGCGTCACAGCAGCATCCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: ERASIGRHAKDQFAG*GPLLQPERHSSIHV Trigger: AACGTGGATGCTGCTGTGACGCTCTGGCTGCAGAAGGGGACCCCAGCCAGCAAACTGATCCTTGGCATGCCTACCTATGGACGCTCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS CCA 90 bp | GACAGCTCTGCTGGAACAGCCGCCCTCCTCCACAGTTGTAGTAAGTaGACTCGTCTCCAGGGTTGGGGTAGACCCCATCAGCTTTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DSSAGTAALLHSCSK*TRLQGWGRPHQLCL Trigger: AAGGCAAAGCTGATGGGGTCTACCCCAACCCTGGAGACGAGTCCACTTACTACAACTGTGGAGGAGGGCGGCTGTTCCAGCAGAGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS TCA 90 bp | TCGATCACTCGGTACAGCTGCAGTCAGAAGGAGGCGTTCCTTCCCTaGGGACTGGGCTTCCTCCTGGAAGGCTTTGGCCAAGTCCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SITRYSCSQKEAFLP*GLGFLLEGFGQVLY Trigger: ATACAGGACTTGGCCAAAGCCTTCCAGGAGGAAGCCCAGTCCTCAGGGAAGGAACGCCTCCTTCTGACTGCAGCTGTACCGAGTGATCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS TCA 90 bp | TGGCTCCTCCCAGCCCCTTCTGTTTCAGGTAGGCAGCCTTGGCTTTaGAGCTTTCCACGTCGTCAAAGCTCACCCACTGGTTGTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WLLPAPSVSGRQPWL*SFPRRQSSPTGCPG Trigger: TCCAGGACAACCAGTGGGTGAGCTTTGACGACGTGGAAAGCTTCAAAGCCAAGGCTGCCTACCTGAAACAGAAGGGGCTGGGAGGAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS CCA 90 bp | GCCGCCCTCCTCCACAGTTGTAGTAAGTGGACTCGTCTCCAGGGTTaGGGTAGACCCCATCAGCTTTGCCTTGGCAGAAGTTATCTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AALLHSCSKWTRLQG*GRPHQLCLGRSYLA Trigger: GGCTAGATAACTTCTGCCAAGGCAAAGCTGATGGGGTCTACCCCAACCCTGGAGACGAGTCCACTTACTACAACTGTGGAGGAGGGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS CCA 90 bp | GCCGCCCTCCTCCACAGTTGTAGTAAGTGGACTCGTCTCCAGGGTTaGGGTAGACCCCATCAGCTTTGCCTTGGCTTTGAAGCTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AALLHSCSKWTRLQG*GRPHQLCLGFEAFH Trigger: GTGGAAAGCTTCAAAGCCAAGGCAAAGCTGATGGGGTCTACCCCAACCCTGGAGACGAGTCCACTTACTACAACTGTGGAGGAGGGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160060.8 |
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| CDS CCA 90 bp | TTAGCTCCAGGTACAACATTTGCAAGAGGCTCTAAACACCAGGCCTaGAGGACAGCTCTGCTGGAACAGCCGCCCTCCTCCACAGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LAPGTTFARGSKHQA*RTALLEQPPSSTVV Trigger: TACAACTGTGGAGGAGGGCGGCTGTTCCAGCAGAGCTGTCCTCCAGGCCTGGTGTTTAGAGCCTCTTGCAAATGTTGTACCTGGAGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGGGGTACGGGCCCTGGTaGCAGAAGGAACCCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DKKETKKLIRGGGMEGTEGYGPW*QKEPLK Trigger: CTTCAAGGGTTCCTTCTGCAACCAGGGCCCGTACCC...CTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
||
| CDS GCA 90 bp | TCAGCTTTGCCTTGGCAGAAGTTATCTAGCCCTGGGCTGGGTCCCTaGTCTGGCATAGAAGATGGGCGTGGCTCAGGTATTATCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SALPWQKLSSPGLGP*SGIEDGRGSGIICS Trigger: AGAACAGATAATACCTGAGCCACGCCCATCTTCTATGCCAGAGCAGGGACCCAGCCCAGGGCTAGATAACTTCTGCCAAGGCAAAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGGGTAGCAGACCAGTTTaGCAGCAGAGCCCCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KKETKKLIRGGGMEGTERGSRPV*QQSPTG Trigger: TCCAGTGGGGCTCTGCTGCAAAACTGGTCTGCTACC...CCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGACGTGGGTACACAGGTaGGGATCCACATCCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KKETKKLIRGGGMEGTERTWVHR*GSTSLG Trigger: TCCCAGGGATGTGGATCCCAACCTGTGTACCCACGT...CCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CAA 90 bp | AGAGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGGGTACGGGCCCTGGTaGCAGAAGGAACCCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RDKKETKKLIRGGGMEGTGYGPW*QKEPLK Trigger: CTTCAAGGGTTCCTTCTGCAACCAGGGCCCGTACCC...TGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
||
| CDS-3UTR CAA 90 bp | AGAGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAACGTGGGTACACAGGTaGGGATCCACATCCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RDKKETKKLIRGGGMEGTTWVHR*GSTSLG Trigger: TCCCAGGGATGTGGATCCCAACCTGTGTACCCACGT...TGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGAGGCCAGCTTTGCCTTGGCTTaGAAGCTTTCCACGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KGNQEADQRWGHGRNREASFALA*KLSTSS Trigger: TGACGACGTGGAAAGCTTCAAAGCCAAGGCAAAGCT...GGCCTCTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160060.8 |
||
| CDS-3UTR CAA 90 bp | AGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGATCCTCCTGGAAGGCTTaGGCCAAGTCCTGTATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RQKGNQEADQRWGHGRNRSSWKA*AKSCIR Trigger: CCTGATACAGGACTTGGCCAAAGCCTTCCAGGAGGA...TCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGTCTGTTCTGGGCTCCTaGGAGTCTCGGATGGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DKKETKKLIRGGGMEGTESVLGS*ESRMED Trigger: ATCTTCCATCCGAGACTCCAAGGAGCCCAGAACAGA...CTCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
||
| CDS-3UTR CAA 90 bp | AGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGAGCTGTGAATCTCTCTTaGTCTACTGTGGGGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RQKGNQEADQRWGHGRNRAVNLS*STVGLP Trigger: TGGGAGCCCCACAGTAGACAAAGAGAGATTCACAGC...TCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CAA 90 bp | AGAGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGCTGTGAATCTCTCTTaGTCTACTGTGGGGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RDKKETKKLIRGGGMEGTAVNLS*STVGLP Trigger: TGGGAGCCCCACAGTAGACAAAGAGAGATTCACAGC...TGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CAA 90 bp | AGAGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACACTCCAGGTACAACATTaGCAAGAGGCTCTAAACACC | + |
|
Preference number: 5 (lower is better) Translates to: RDKKETKKLIRGGGMEGTLQVQH*QEALNT Trigger: GGTGTTTAGAGCCTCTTGCAAATGTTGTACCTGGAG...TGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
||
| CDS-3UTR CAA 90 bp | AGACAAAAAGGAAACCAAGAAGCTGATCAGAGGTGGGGGCATGGAAGGAACAGACTCCAGGTACAACATTaGCAAGAGGCTCTAAACACC | + |
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Preference number: 5 (lower is better) Translates to: RQKGNQEADQRWGHGRNRLQVQH*QEALNT Trigger: GGTGTTTAGAGCCTCTTGCAAATGTTGTACCTGGAG...TCTGTTCCTTCCATGCCCCCACCTCTGATCAGCTTCTTGGTTTCCTTTTTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS TCA 72 bp | ACCAGGCCCTGTGGCTGGGGCCCCAACTCCATTGTCTaGCGAGGAGGCCAAGGTGAAAGAGCGTCCATAGGT | + |
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Preference number: 6 (lower is better) Translates to: TRPCGWGPNSIV*RGGQGERASIG Trigger: ACCTATGGACGCTCTTTCACCTTGGCCTCCTCGTCAGACAATGGAGTTGGGGCCCCAGCCACAGGGCCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS CCA 72 bp | TCCATAGGTAGGCATGCCAAGGATCAGTTTGCTGGCTaGGGTCCCCTTCTGCAGCCAGAGCGTCACAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SIGRHAKDQFAG*GPLLQPERHSS Trigger: GCTGCTGTGACGCTCTGGCTGCAGAAGGGGACCCCAGCCAGCAAACTGATCCTTGGCATGCCTACCTATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS CCA 72 bp | GCTGGAACAGCCGCCCTCCTCCACAGTTGTAGTAAGTaGACTCGTCTCCAGGGTTGGGGTAGACCCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: AGTAALLHSCSK*TRLQGWGRPHQ Trigger: CTGATGGGGTCTACCCCAACCCTGGAGACGAGTCCACTTACTACAACTGTGGAGGAGGGCGGCTGTTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS GCA 72 bp | ACTCGTCTCCAGGGTTGGGGTAGACCCCATCAGCTTTaGCTTGGCAGAAGTTATCTAGCCCTGGGCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: TRLQGWGRPHQL*LGRSYLALGWV Trigger: GACCCAGCCCAGGGCTAGATAACTTCTGCCAAGGCAAAGCTGATGGGGTCTACCCCAACCCTGGAGACGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS GCA 72 bp | CCTTGGCAGAAGTTATCTAGCCCTGGGCTGGGTCCCTaGTCTGGCATAGAAGATGGGCGTGGCTCAGGTATT | + |
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Preference number: 6 (lower is better) Translates to: PWQKLSSPGLGP*SGIEDGRGSGI Trigger: AATACCTGAGCCACGCCCATCTTCTATGCCAGAGCAGGGACCCAGCCCAGGGCTAGATAACTTCTGCCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS CCA 72 bp | TGGGCTGGGTCCCTGCTCTGGCATAGAAGATGGGCGTaGCTCAGGTATTATCTGTTCTGGGCTCCTTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: WAGSLLWHRRWA*LRYYLFWAPWS Trigger: ACTCCAAGGAGCCCAGAACAGATAATACCTGAGCCACGCCCATCTTCTATGCCAGAGCAGGGACCCAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS CAA 72 bp | CTTCTGCAGCCAGAGCGTCACAGCAGCATCCACGTTTaGCTCAGCGGCTGCCCCACTTTCTCCTTGCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LLQPERHSSIHV*LSGCPTFSLPF Trigger: AAAAGGCAAGGAGAAAGTGGGGCAGCCGCTGAGCAAAACGTGGATGCTGCTGTGACGCTCTGGCTGCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS TCA 72 bp | CCTGGAAGGCTTTGGCCAAGTCCTGTATCAGGGCTGTaGATCTCTCTTTGTCTACTGTGGGGCTCCCACGTC | + |
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Preference number: 6 (lower is better) Translates to: PGRLWPSPVSGL*ISLCLLWGSHV Trigger: GACGTGGGAGCCCCACAGTAGACAAAGAGAGATTCACAGCCCTGATACAGGACTTGGCCAAAGCCTTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS CAA 72 bp | TTGGCCAAGTCCTGTATCAGGGCTGTGAATCTCTCTTaGTCTACTGTGGGGCTCCCACGTCCACCTGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LAKSCIRAVNLS*STVGLPRPPGN Trigger: GTTCCCAGGTGGACGTGGGAGCCCCACAGTAGACAAAGAGAGATTCACAGCCCTGATACAGGACTTGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS CAA 72 bp | GTCTCCAGGGTTGGGGTAGACCCCATCAGCTTTGCCTaGGCTTTGAAGCTTTCCACGTCGTCAAAGCTCACC | + |
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Preference number: 6 (lower is better) Translates to: VSRVGVDPISFA*ALKLSTSSKLT Trigger: GGTGAGCTTTGACGACGTGGAAAGCTTCAAAGCCAAGGCAAAGCTGATGGGGTCTACCCCAACCCTGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160060.8 |
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| CDS CAA 90 bp | TGGTTGTCCATTCCAGCAAAAGCAAAGATGACGTGGGTACACAGGTaGGGATCCACATCCCTGGGAAAGAACCGAACTGCCTCCGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: WLSIPAKAKMTWVHR*GSTSLGKNRTASVR Trigger: CCGGACGGAGGCAGTTCGGTTCTTTCCCAGGGATGTGGATCCCAACCTGTGTACCCACGTCATCTTTGCTTTTGCTGGAATGGACAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS GCA 72 bp | ACTCGTCTCCAGGGTTGGGGTAGACCCCATCAGCTTTaGCTTGGCTTTGAAGCTTTCCACGTCGTCAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: TRLQGWGRPHQL*LGFEAFHVVKA Trigger: AGCTTTGACGACGTGGAAAGCTTCAAAGCCAAGGCAAAGCTGATGGGGTCTACCCCAACCCTGGAGACGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160060.8 |
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| CDS CCA 72 bp | CTCCACAGTTGTAGTAAGTGGACTCGTCTCCAGGGTTaGGGTAGACCCCATCAGCTTTGCCTTGGCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: LHSCSKWTRLQG*GRPHQLCLGRS Trigger: ACTTCTGCCAAGGCAAAGCTGATGGGGTCTACCCCAACCCTGGAGACGAGTCCACTTACTACAACTGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS CAA 72 bp | AAGGTCCAGCCTCCAACGGCTAACAGGGTCTTGAGCTaGGGGTTCTTAGTCTTTAGGCTGTTCAGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: KVQPPTANRVLS*GFLVFRLFSSW Trigger: CCAGGAGCTGAACAGCCTAAAGACTAAGAACCCCAAGCTCAAGACCCTGTTAGCCGTTGGAGGCTGGACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS CCA 72 bp | CTCCACAGTTGTAGTAAGTGGACTCGTCTCCAGGGTTaGGGTAGACCCCATCAGCTTTGCCTTGGCTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LHSCSKWTRLQG*GRPHQLCLGFE Trigger: TTCAAAGCCAAGGCAAAGCTGATGGGGTCTACCCCAACCCTGGAGACGAGTCCACTTACTACAACTGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160060.8 |
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| CDS CAA 72 bp | GTACCAAAGGTCCAGCCTCCAACGGCTAACAGGGTCTaGAGCTTGGGGTTCTTAGTCTTTAGGCTGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: VPKVQPPTANRV*SLGFLVFRLFS Trigger: GCTGAACAGCCTAAAGACTAAGAACCCCAAGCTCAAGACCCTGTTAGCCGTTGGAGGCTGGACCTTTGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS CAA 72 bp | ATTCCAGCAAAAGCAAAGATGACGTGGGTACACAGGTaGGGATCCACATCCCTGGGAAAGAACCGAACTGCC | + |
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Preference number: 6 (lower is better) Translates to: IPAKAKMTWVHR*GSTSLGKNRTA Trigger: GGCAGTTCGGTTCTTTCCCAGGGATGTGGATCCCAACCTGTGTACCCACGTCATCTTTGCTTTTGCTGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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| CDS CAA 72 bp | ATGGGCGTGGCTCAGGTATTATCTGTTCTGGGCTCCTaGGAGTCTCGGATGGAAGATTTAGTTCCTGCCGTA | + |
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Preference number: 6 (lower is better) Translates to: MGVAQVLSVLGS*ESRMEDLVPAV Trigger: TACGGCAGGAACTAAATCTTCCATCCGAGACTCCAAGGAGCCCAGAACAGATAATACCTGAGCCACGCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 |
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| CDS TCA 72 bp | CCTGGTAGAGAAGTTCGTCATTGTGCTCCACAGTGCTaGGCTGATGGTTGTCCATTCCAGCAAAAGCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: PGREVRHCAPQC*ADGCPFQQKQR Trigger: TCTTTGCTTTTGCTGGAATGGACAACCATCAGCTCAGCACTGTGGAGCACAATGACGAACTTCTCTACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086475.3 ENSMUST00000159963.8 ENSMUST00000160060.8 |
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