Pregenerated sensors for CHIL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063779Ensembl transcript IDs: ENSMUST00000082219.6
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCAGGAAAGATCGTGACTTAGTTCTATTATTCTCCATGGAAGCATaGTGCAGAATCCATCGTGGAAAAACCGTTGAAGTTGCTCTTATT | + |
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Preference number: 1 (lower is better) Translates to: FRKDRDLVLLFSMEA*CRIHRGKTVEVALI Trigger: AATAAGAGCAACTTCAACGGTTTTTCCACGATGGATTCTGCATCATGCTTCCATGGAGAATAATAGAACTAAGTCACGATCTTTCCTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| 3UTR TCA 90 bp | ACATATATCTTAGTTCTACTCTGGGATTCAATTCAGGAAAGATCGTaGCTTAGTTCTATTATTCTCCATGGAAGCATGATGCAGAATCCA | + |
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Preference number: 1 (lower is better) Translates to: TYILVLLWDSIQERS*LSSIILHGSMMQNP Trigger: TGGATTCTGCATCATGCTTCCATGGAGAATAATAGAACTAAGTCACGATCTTTCCTGAATTGAATCCCAGAGTAGAACTAAGATATATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAAACAAGGAAGGTGGTTTTACAGGAAGCAAAAATGTTCAGAGCTTAGCCTTCTCCATGGAAGCATaGTGCAGAATCCATCGTGGA | + |
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Preference number: 2 (lower is better) Translates to: GRNKEGGFTGSKNVQSLAFSMEA*CRIHRG Trigger: TCCACGATGGATTCTGCATCATGCTTCCATGGAGAA...GGCTAAGCTCTGAACATTTTTGCTTCCTGTAAAACCACCTTCCTTGTTTCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| 3UTR-3UTR GCA 90 bp | GGAAGAAACAAGGAAGGTGGTTTTACAGGAAGCAAAAATGTTCAGAGCTTAGCCTTTTTGTTTCTTTTCTaGTGGTATAGCAGACAAGAC | + |
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Preference number: 2 (lower is better) Translates to: GRNKEGGFTGSKNVQSLAFLFLF*WYSRQD Trigger: GTCTTGTCTGCTATACCAGCAGAAAAGAAACAAAAA...GGCTAAGCTCTGAACATTTTTGCTTCCTGTAAAACCACCTTCCTTGTTTCTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| 3UTR-3UTR CCA 90 bp | AAACAAGGAAGGTGGTTTTACAGGAAGCAAAAATGTTCAGAGCTTAGCCAAAGCATCTTAGTTCTACTCTaGGATTCAATTCAGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: KQGRWFYRKQKCSELSQSILVLL*DSIQER Trigger: TCTTTCCTGAATTGAATCCCAGAGTAGAACTAAGAT...GCTTTGGCTAAGCTCTGAACATTTTTGCTTCCTGTAAAACCACCTTCCTTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTTCTGCTGGTATAGCAGACAAGACATATATCTTAGTTCTACTCTGGGATTTCTATTATTCTCCATaGAAGCATGATGCAGAATCC | + |
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Preference number: 2 (lower is better) Translates to: FFSAGIADKTYILVLLWDFYYSP*KHDAES Trigger: GGATTCTGCATCATGCTTCCATGGAGAATAATAGAA...ATCCCAGAGTAGAACTAAGATATATGTCTTGTCTGCTATACCAGCAGAAAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| 3UTR TCA 72 bp | TTAGTTCTACTCTGGGATTCAATTCAGGAAAGATCGTaGCTTAGTTCTATTATTCTCCATGGAAGCATGATG | + |
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Preference number: 3 (lower is better) Translates to: LVLLWDSIQERS*LSSIILHGSMM Trigger: CATCATGCTTCCATGGAGAATAATAGAACTAAGTCACGATCTTTCCTGAATTGAATCCCAGAGTAGAACTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS-3UTR TCA 90 bp | GGAAGAAACAAGGAAGGTGGTTTTACAGGAAGCAAAAATGTTCAGAGCTTAGCCGGGAAACGTCCCTGGTaGCAGAAAGAACCACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: GRNKEGGFTGSKNVQSLAGKRPW*QKEPLK Trigger: CTTCAGTGGTTCTTTCTGTCACCAGGGACGTTTCCC...GGCTAAGCTCTGAACATTTTTGCTTCCTGTAAAACCACCTTCCTTGTTTCTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS-3UTR TCA 90 bp | AGTTCTATTATTCTCCATGGAAGCATGATGCAGAATCCATCGTGGAAAAACCGTCAGCTCCTGTGGAAGTaGGTAGCAGCCTTGGAATGT | + |
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Preference number: 4 (lower is better) Translates to: SSIILHGSMMQNPSWKNRQLLWK*VAALEC Trigger: ACATTCCAAGGCTGCTACTCACTTCCACAGGAGCTG...ACGGTTTTTCCACGATGGATTCTGCATCATGCTTCCATGGAGAATAATAGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS-3UTR TCA 90 bp | GGAAGAAACAAGGAAGGTGGTTTTACAGGAAGCAAAAATGTTCAGAGCTTAGCCCTCAGGATAAAGGTATaGCCATATGCTGGAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: GRNKEGGFTGSKNVQSLALRIKV*PYAGNP Trigger: GGGATTTCCAGCATATGGTCATACCTTTATCCTGAG...GGCTAAGCTCTGAACATTTTTGCTTCCTGTAAAACCACCTTCCTTGTTTCTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS-3UTR GCA 90 bp | AAACAAGGAAGGTGGTTTTACAGGAAGCAAAAATGTTCAGAGCTTAGCCAAAGCCTCGATAAGAGGCCTTaGAACTTGCACTGTGTACAT | + |
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Preference number: 4 (lower is better) Translates to: KQGRWFYRKQKCSELSQSLDKRP*NLHCVH Trigger: ATGTACACAGTGCAAGTTGCAAGGCCTCTTATCGAG...GCTTTGGCTAAGCTCTGAACATTTTTGCTTCCTGTAAAACCACCTTCCTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS-3UTR CCA 90 bp | CAAGACATATATCTTAGTTCTACTCTGGGATTCAATTCAGGAAAGATCGTGACTAGCAGCCTTGGAATGTaGTTCAAAGTGGATTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: QDIYLSSTLGFNSGKIVTSSLGM*FKVDSS Trigger: GGAAGAATCCACTTTGAACCACATTCCAAGGCTGCT...AGTCACGATCTTTCCTGAATTGAATCCCAGAGTAGAACTAAGATATATGTCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS-3UTR TCA 90 bp | AAACAAGGAAGGTGGTTTTACAGGAAGCAAAAATGTTCAGAGCTTAGCCAAAGCGCTCACTTAAGTAAGTaGTCTCATTATTCTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: KQGRWFYRKQKCSELSQSAHLSK*SHYSSS Trigger: GGATGAAGAATAATGAGATCACTTACTTAAGTGAGC...GCTTTGGCTAAGCTCTGAACATTTTTGCTTCCTGTAAAACCACCTTCCTTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS-3UTR TCA 90 bp | AAACAAGGAAGGTGGTTTTACAGGAAGCAAAAATGTTCAGAGCTTAGCCAAAGCAAGGAATCTGATAACTaGCTTAATGAATGTCTGACG | + |
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Preference number: 4 (lower is better) Translates to: KQGRWFYRKQKCSELSQSKESDN*LNECLT Trigger: CGTCAGACATTCATTAAGTCAGTTATCAGATTCCTT...GCTTTGGCTAAGCTCTGAACATTTTTGCTTCCTGTAAAACCACCTTCCTTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS-3UTR CCA 90 bp | AAACAAGGAAGGTGGTTTTACAGGAAGCAAAAATGTTCAGAGCTTAGCCAAAGCGAATGTGGTTCAAAGTaGATTCTTCCTCAAAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: KQGRWFYRKQKCSELSQSECGSK*ILPQKL Trigger: AAGCTTTTGAGGAAGAATCCACTTTGAACCACATTC...GCTTTGGCTAAGCTCTGAACATTTTTGCTTCCTGTAAAACCACCTTCCTTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS-3UTR CCA 90 bp | CAAGACATATATCTTAGTTCTACTCTGGGATTCAATTCAGGAAAGATCGTGACTCCATTCTTAGGATCATaGAGATCATATGTCATGACC | + |
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Preference number: 4 (lower is better) Translates to: QDIYLSSTLGFNSGKIVTPFLGS*RSYVMT Trigger: GGTCATGACATATGATCTCCATGATCCTAAGAATGG...AGTCACGATCTTTCCTGAATTGAATCCCAGAGTAGAACTAAGATATATGTCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS-3UTR GCA 90 bp | TTCTTTTCTGCTGGTATAGCAGACAAGACATATATCTTAGTTCTACTCTGGGATTACATTCAGAAGAATTaGCAGACCTGTGACAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: FFSAGIADKTYILVLLWDYIQKN*QTCDKN Trigger: ATTCTTGTCACAGGTCTGGCAATTCTTCTGAATGTA...ATCCCAGAGTAGAACTAAGATATATGTCTTGTCTGCTATACCAGCAGAAAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS TCA 90 bp | GGGTCACCTATTCCATTCTTAGAAGGGTCACTCAGGATAAAGGTATaGCCATATGCTGGAAATCCCACAATGAGCTTCTCAGAAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: GSPIPFLEGSLRIKV*PYAGNPTMSFSEAA Trigger: AGCAGCTTCTGAGAAGCTCATTGTGGGATTTCCAGCATATGGTCATACCTTTATCCTGAGTGACCCTTCTAAGAATGGAATAGGTGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS CCA 90 bp | TCAATGAATCCAGCTCCTGTGGAAGTGAGTAGCAGCCTTGGAATGTaGTTCAAAGTGGATTCTTCCTCAAAAGCTTTACGCATTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SMNPAPVEVSSSLGM*FKVDSSSKALRISC Trigger: GCAGGAAATGCGTAAAGCTTTTGAGGAAGAATCCACTTTGAACCACATTCCAAGGCTGCTACTCACTTCCACAGGAGCTGGATTCATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS GCA 90 bp | ATGTGGTTCAAAGTGGATTCTTCCTCAAAAGCTTTACGCATTTCCTaGACCAGAACACTGAAGAGATGTTTGTCCTTAGGAGGGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: MWFKVDSSSKALRIS*TRTLKRCLSLGGLP Trigger: AGGAAGCCCTCCTAAGGACAAACATCTCTTCAGTGTTCTGGTGCAGGAAATGCGTAAAGCTTTTGAGGAAGAATCCACTTTGAACCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS-3UTR CAA 90 bp | GGAAGAAACAAGGAAGGTGGTTTTACAGGAAGCAAAAATGTTCAGAGCTTAGCCTCAATATTACCAGGTTaGAAACTCCCTTCTGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: GRNKEGGFTGSKNVQSLASILPG*KLPSVG Trigger: GCCAACAGAAGGGAGTTTCAAACCTGGTAATATTGA...GGCTAAGCTCTGAACATTTTTGCTTCCTGTAAAACCACCTTCCTTGTTTCTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS-3UTR CAA 90 bp | ATAGCAGACAAGACATATATCTTAGTTCTACTCTGGGATTCAATTCAGGAAAGAGTAAGCCAGGAGTCCTaGTTCATTTGTGTACTTTCC | + |
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Preference number: 5 (lower is better) Translates to: IADKTYILVLLWDSIQERVSQES*FICVLS Trigger: GGAAAGTACACAAATGAACAAGGACTCCTGGCTTAC...TCTTTCCTGAATTGAATCCCAGAGTAGAACTAAGATATATGTCTTGTCTGCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS CAA 90 bp | TCAAAAGCTTTACGCATTTCCTGCACCAGAACACTGAAGAGATGTTaGTCCTTAGGAGGGCTTCCTCGAGACCCAGGGTACTGCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SKALRISCTRTLKRC*SLGGLPRDPGYCQS Trigger: GGACTGGCAGTACCCTGGGTCTCGAGGAAGCCCTCCTAAGGACAAACATCTCTTCAGTGTTCTGGTGCAGGAAATGCGTAAAGCTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS CAA 72 bp | TTACGCATTTCCTGCACCAGAACACTGAAGAGATGTTaGTCCTTAGGAGGGCTTCCTCGAGACCCAGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: LRISCTRTLKRC*SLGGLPRDPGY Trigger: GTACCCTGGGTCTCGAGGAAGCCCTCCTAAGGACAAACATCTCTTCAGTGTTCTGGTGCAGGAAATGCGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS CCA 72 bp | GGGGTCAATATTACCAGGTTTGAAACTCCCTTCTGTTaGCCTGTCCTTAGCCCAGCTGGTATAGTAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: GVNITRFETPFC*PVLSPAGIVAH Trigger: ATGTGCTACTATACCAGCTGGGCTAAGGACAGGCCAACAGAAGGGAGTTTCAAACCTGGTAATATTGACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS CCA 72 bp | CCAGCTCCTGTGGAAGTGAGTAGCAGCCTTGGAATGTaGTTCAAAGTGGATTCTTCCTCAAAAGCTTTACGC | + |
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Preference number: 6 (lower is better) Translates to: PAPVEVSSSLGM*FKVDSSSKALR Trigger: GCGTAAAGCTTTTGAGGAAGAATCCACTTTGAACCACATTCCAAGGCTGCTACTCACTTCCACAGGAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS CCA 72 bp | GTAAGCCAGGAGTCCTTGTTCATTTGTGTACTTTCCTaGTGGTCCAGCACTAACAGTAGGGTCACCTATTCC | + |
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Preference number: 6 (lower is better) Translates to: VSQESLFICVLS*WSSTNSRVTYS Trigger: GGAATAGGTGACCCTACTGTTAGTGCTGGACCACCAGGAAAGTACACAAATGAACAAGGACTCCTGGCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS GCA 72 bp | CTTAGAAGGGTCACTCAGGATAAAGGTATGACCATATaGTGGAAATCCCACAATGAGCTTCTCAGAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LRRVTQDKGMTI*WKSHNELLRSC Trigger: GCAGCTTCTGAGAAGCTCATTGTGGGATTTCCAGCATATGGTCATACCTTTATCCTGAGTGACCCTTCTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS TCA 72 bp | AGAAGCTGCTCCATGGTCCTTCCAGTAGGTAATAATTaGATCCACATTGAGATCAGCACTCTTTCCAATGTC | + |
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Preference number: 6 (lower is better) Translates to: RSCSMVLPVGNN*IHIEISTLSNV Trigger: GACATTGGAAAGAGTGCTGATCTCAATGTGGATTCAATTATTACCTACTGGAAGGACCATGGAGCAGCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS CAA 72 bp | CAGAAATGTACAAATCTCAAAGTAAGCCAGGAGTCCTaGTTCATTTGTGTACTTTCCTGGTGGTCCAGCACT | + |
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Preference number: 6 (lower is better) Translates to: QKCTNLKVSQES*FICVLSWWSST Trigger: AGTGCTGGACCACCAGGAAAGTACACAAATGAACAAGGACTCCTGGCTTACTTTGAGATTTGTACATTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS TCA 72 bp | ATTCCATTCTTAGAAGGGTCACTCAGGATAAAGGTATaGCCATATGCTGGAAATCCCACAATGAGCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: IPFLEGSLRIKV*PYAGNPTMSFS Trigger: TGAGAAGCTCATTGTGGGATTTCCAGCATATGGTCATACCTTTATCCTGAGTGACCCTTCTAAGAATGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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| CDS TCA 72 bp | GCCATCAAAGTTATATTGACGAAGGAATCTGATAACTaGCTTAATGAATGTCTGACGGTTCTGAGGAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: AIKVILTKESDN*LNECLTVLRSR Trigger: TCTACTCCTCAGAACCGTCAGACATTCATTAAGTCAGTTATCAGATTCCTTCGTCAATATAACTTTGATGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082219.6 |
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