Pregenerated sensors for CHIL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040809Ensembl transcript IDs: ENSMUST00000063062.9, ENSMUST00000149836.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGATTCAATTTAGGAAAGTTCATGACTTATTTCTATTATTCTCCATaGAAGCATGATGCAGAATGCACTGTGGAAAAACCGTTGAACTTG | + |
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Preference number: 1 (lower is better) Translates to: GFNLGKFMTYFYYSP*KHDAECTVEKPLNL Trigger: CAAGTTCAACGGTTTTTCCACAGTGCATTCTGCATCATGCTTCCATGGAGAATAATAGAAATAAGTCATGAACTTTCCTAAATTGAATCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAACAAGCATGGTGGTTTTACAGGAAGCAAAAGATGTTCAGAGCTTAGCCAATTCTCCATGGAAGCATaGTGCAGAATGCACTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: RNKHGGFTGSKRCSELSQFSMEA*CRMHCG Trigger: TCCACAGTGCATTCTGCATCATGCTTCCATGGAGAA...TTGGCTAAGCTCTGAACATCTTTTGCTTCCTGTAAAACCACCATGCTTGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTCCCAGCTGGTACAGCAGACAAGACATCCATCTTAGTACTACTCTGGGATTCTATTATTCTCCATaGAAGCATGATGCAGAATGC | + |
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Preference number: 2 (lower is better) Translates to: FLPSWYSRQDIHLSTTLGFYYSP*KHDAEC Trigger: GCATTCTGCATCATGCTTCCATGGAGAATAATAGAA...TCCCAGAGTAGTACTAAGATGGATGTCTTGTCTGCTGTACCAGCTGGGAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| 3UTR-3UTR GCA 90 bp | GAAACAAGCATGGTGGTTTTACAGGAAGCAAAAGATGTTCAGAGCTTAGCCAAAAAGCATGATGCAGAATaGACTGTGGAAAAACCGTTG | + |
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Preference number: 2 (lower is better) Translates to: ETSMVVLQEAKDVQSLAKKHDAE*TVEKPL Trigger: CAACGGTTTTTCCACAGTGCATTCTGCATCATGCTT...TTTGGCTAAGCTCTGAACATCTTTTGCTTCCTGTAAAACCACCATGCTTGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| 3UTR CCA 72 bp | TTAGGAAAGTTCATGACTTATTTCTATTATTCTCCATaGAAGCATGATGCAGAATGCACTGTGGAAAAACCG | + |
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Preference number: 3 (lower is better) Translates to: LGKFMTYFYYSP*KHDAECTVEKP Trigger: CGGTTTTTCCACAGTGCATTCTGCATCATGCTTCCATGGAGAATAATAGAAATAAGTCATGAACTTTCCTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| 3UTR GCA 72 bp | TATTTCTATTATTCTCCATGGAAGCATGATGCAGAATaGACTGTGGAAAAACCGTTGAACTTGATCTTATTC | + |
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Preference number: 3 (lower is better) Translates to: YFYYSPWKHDAE*TVEKPLNLILF Trigger: GAATAAGATCAAGTTCAACGGTTTTTCCACAGTGCATTCTGCATCATGCTTCCATGGAGAATAATAGAAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR GCA 90 bp | TATTATTCTCCATGGAAGCATGATGCAGAATGCACTGTGGAAAAACCGTTGAACCGAGACCCAGGGTACTaGCAGTCCAGGTTGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: YYSPWKHDAECTVEKPLNRDPGY*QSRLRP Trigger: TGGCCTCAACCTGGACTGGCAGTACCCTGGGTCTCG...GTTCAACGGTTTTTCCACAGTGCATTCTGCATCATGCTTCCATGGAGAATAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR TCA 90 bp | CCCAGCTGGTACAGCAGACAAGACATCCATCTTAGTACTACTCTGGGATTCAATGGGAAATGTCTCTGGTaGCAGAAAGAACCACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: PSWYSRQDIHLSTTLGFNGKCLW*QKEPLK Trigger: CTTCAGTGGTTCTTTCTGTCACCAGAGACATTTCCC...ATTGAATCCCAGAGTAGTACTAAGATGGATGTCTTGTCTGCTGTACCAGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR GCA 90 bp | AGCATGGTGGTTTTACAGGAAGCAAAAGATGTTCAGAGCTTAGCCAAAGCTGACGAGCTTCTCAGAAGCTaGTCCATGGTCCTTCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: SMVVLQEAKDVQSLAKADELLRS*SMVLPV Trigger: TACTGGAAGGACCATGGAGCAGCTTCTGAGAAGCTC...GTCAGCTTTGGCTAAGCTCTGAACATCTTTTGCTTCCTGTAAAACCACCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR TCA 90 bp | AGAAACAAGCATGGTGGTTTTACAGGAAGCAAAAGATGTTCAGAGCTTAGCCAACTGCTCCTGTGGAAGTaGGTAGCAGCCTTGGAATGT | + |
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Preference number: 4 (lower is better) Translates to: RNKHGGFTGSKRCSELSQLLLWK*VAALEC Trigger: ACATTCCAAGGCTGCTACTCACTTCCACAGGAGCAG...TTGGCTAAGCTCTGAACATCTTTTGCTTCCTGTAAAACCACCATGCTTGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR TCA 90 bp | TATTCTCCATGGAAGCATGATGCAGAATGCACTGTGGAAAAACCGTTGAACTTGCTGGAAATCCCACAATaGGCTTCTCAGAAGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: YSPWKHDAECTVEKPLNLLEIPQ*ASQKLL Trigger: GAGCAGCTTCTGAGAAGCTCATTGTGGGATTTCCAG...CAAGTTCAACGGTTTTTCCACAGTGCATTCTGCATCATGCTTCCATGGAGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR TCA 90 bp | CAAGAAACAAGCATGGTGGTTTTACAGGAAGCAAAAGATGTTCAGAGCTTAGCCTTGTCCTTGAGCCACTaGGCCTTCAACTTGAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QETSMVVLQEAKDVQSLALSLSH*AFNLKL Trigger: GAGCTTCAAGTTGAAGGCTCAGTGGCTCAAGGACAA...GGCTAAGCTCTGAACATCTTTTGCTTCCTGTAAAACCACCATGCTTGTTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR CCA 90 bp | CCCAGCTGGTACAGCAGACAAGACATCCATCTTAGTACTACTCTGGGATTCAATATCTGTGTACTTTCCTaGTGGGCCAGTACTAATTGT | + |
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Preference number: 4 (lower is better) Translates to: PSWYSRQDIHLSTTLGFNICVLS*WASTNC Trigger: ACAATTAGTACTGGCCCACCAGGAAAGTACACAGAT...ATTGAATCCCAGAGTAGTACTAAGATGGATGTCTTGTCTGCTGTACCAGCTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR TCA 90 bp | ATGCACTGTGGAAAAACCGTTGAACTTGATCTTATTCTGAGAGTTTCAAGGACAGACAGAAAGAACCACTaGAGTCATCCATGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: MHCGKTVELDLILRVSRTDRKNH*SHPCPG Trigger: CCCTGGACATGGATGACTTCAGTGGTTCTTTCTGTC...TGTCCTTGAAACTCTCAGAATAAGATCAAGTTCAACGGTTTTTCCACAGTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR GCA 90 bp | CCCAGCTGGTACAGCAGACAAGACATCCATCTTAGTACTACTCTGGGATTCAATTTTCAGACCATTCAATaGTTCATAGTCACGCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: PSWYSRQDIHLSTTLGFNFQTIQ*FIVTQV Trigger: GACTTGCGTGACTATGAAGCATTGAATGGTCTGAAA...ATTGAATCCCAGAGTAGTACTAAGATGGATGTCTTGTCTGCTGTACCAGCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR GCA 90 bp | TATTCTCCATGGAAGCATGATGCAGAATGCACTGTGGAAAAACCGTTGAACTTGCTCAGGATAAAGGTATaGCCATATGCTGGAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: YSPWKHDAECTVEKPLNLLRIKV*PYAGNP Trigger: GGGATTTCCAGCATATGGGCATACCTTTATCCTGAG...CAAGTTCAACGGTTTTTCCACAGTGCATTCTGCATCATGCTTCCATGGAGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR CCA 90 bp | TTCTATTATTCTCCATGGAAGCATGATGCAGAATGCACTGTGGAAAAACCGTTGGAAACTCCCTTCTATTaGCCTGTCCTTAGCCCAACT | + |
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Preference number: 4 (lower is better) Translates to: FYYSPWKHDAECTVEKPLETPFY*PVLSPT Trigger: AGTTGGGCTAAGGACAGGCCAATAGAAGGGAGTTTC...CAACGGTTTTTCCACAGTGCATTCTGCATCATGCTTCCATGGAGAATAATAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR CCA 90 bp | TATTATTCTCCATGGAAGCATGATGCAGAATGCACTGTGGAAAAACCGTTGAACCATCCCAGACCTCAGTaGCTCCTTCATTCAGAAATG | + |
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Preference number: 4 (lower is better) Translates to: YYSPWKHDAECTVEKPLNHPRPQ*LLHSEM Trigger: CATTTCTGAATGAAGGAGCCACTGAGGTCTGGGATG...GTTCAACGGTTTTTCCACAGTGCATTCTGCATCATGCTTCCATGGAGAATAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR TCA 90 bp | CAAGAAACAAGCATGGTGGTTTTACAGGAAGCAAAAGATGTTCAGAGCTTAGCCCCAGTAGGAAATGATTaGATCCACATTGAGATCAGC | + |
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Preference number: 4 (lower is better) Translates to: QETSMVVLQEAKDVQSLAPVGND*IHIEIS Trigger: GCTGATCTCAATGTGGATTCAATCATTTCCTACTGG...GGCTAAGCTCTGAACATCTTTTGCTTCCTGTAAAACCACCATGCTTGTTTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR CCA 90 bp | TATTATTCTCCATGGAAGCATGATGCAGAATGCACTGTGGAAAAACCGTTGAACACTTCCATCCTCCAATaGCCAGGAGAGTTTTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: YYSPWKHDAECTVEKPLNTSILQ*PGEFLA Trigger: AGCTAAAAACTCTCCTGGCCATTGGAGGATGGAAGT...GTTCAACGGTTTTTCCACAGTGCATTCTGCATCATGCTTCCATGGAGAATAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR TCA 90 bp | TATTCTCCATGGAAGCATGATGCAGAATGCACTGTGGAAAAACCGTTGAACTTGGCTCATGTGTGTAAGTaGTCTCATTATTCTGCATTC | + |
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Preference number: 4 (lower is better) Translates to: YSPWKHDAECTVEKPLNLAHVCK*SHYSAF Trigger: GAATGCAGAATAATGAGATCACTTACACACATGAGC...CAAGTTCAACGGTTTTTCCACAGTGCATTCTGCATCATGCTTCCATGGAGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR GCA 90 bp | TATTCTCCATGGAAGCATGATGCAGAATGCACTGTGGAAAAACCGTTGAACTTGTACGTTCAGAAGAATTaGCAGACCTGTGACAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: YSPWKHDAECTVEKPLNLYVQKN*QTCDKN Trigger: ATTCTTGTCACAGGTCTGGCAATTCTTCTGAACGTA...CAAGTTCAACGGTTTTTCCACAGTGCATTCTGCATCATGCTTCCATGGAGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR CCA 90 bp | AGAAACAAGCATGGTGGTTTTACAGGAAGCAAAAGATGTTCAGAGCTTAGCCAACCATCCTTAGGATCATaGAGATCATATGTCATGACC | + |
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Preference number: 4 (lower is better) Translates to: RNKHGGFTGSKRCSELSQPSLGS*RSYVMT Trigger: GGTCATGACATATGATCTCCATGATCCTAAGGATGG...TTGGCTAAGCTCTGAACATCTTTTGCTTCCTGTAAAACCACCATGCTTGTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR CCA 90 bp | ATGCACTGTGGAAAAACCGTTGAACTTGATCTTATTCTGAGAGTTTCAAGGACAGGTATGCCCATATGCTaGAAATCCCACAATGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: MHCGKTVELDLILRVSRTGMPIC*KSHNEL Trigger: AAGCTCATTGTGGGATTTCCAGCATATGGGCATACC...TGTCCTTGAAACTCTCAGAATAAGATCAAGTTCAACGGTTTTTCCACAGTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR TCA 90 bp | CAAGAAACAAGCATGGTGGTTTTACAGGAAGCAAAAGATGTTCAGAGCTTAGCCAAGGAATCTGATAACTaGCTGAATGAATATCTGACG | + |
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Preference number: 4 (lower is better) Translates to: QETSMVVLQEAKDVQSLAKESDN*LNEYLT Trigger: CGTCAGATATTCATTCAGTCAGTTATCAGATTCCTT...GGCTAAGCTCTGAACATCTTTTGCTTCCTGTAAAACCACCATGCTTGTTTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR CCA 90 bp | ATTGTGAGAGCAAGAAACAAGCATGGTGGTTTTACAGGAAGCAAAAGATGTTCACTTTCCAATGTCATATaGAGATTTATAGAGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: IVRARNKHGGFTGSKRCSLSNVI*RFIEGT Trigger: AGTCCCCTCTATAAATCTCCATATGACATTGGAAAG...TGAACATCTTTTGCTTCCTGTAAAACCACCATGCTTGTTTCTTGCTCTCACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS GCA 90 bp | GGGGCACCAATTCCAGTCTTAGAAGGGTCACTCAGGATAAAGGTATaGCCATATGCTGGAAATCCCACAATGAGCTTCTCAGAAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: GAPIPVLEGSLRIKV*PYAGNPTMSFSEAA Trigger: AGCAGCTTCTGAGAAGCTCATTGTGGGATTTCCAGCATATGGGCATACCTTTATCCTGAGTGACCCTTCTAAGACTGGAATTGGTGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR CAA 90 bp | CCCAGCTGGTACAGCAGACAAGACATCCATCTTAGTACTACTCTGGGATTCAATATGATTGAATCCACATaGAGATCAGCACTCTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: PSWYSRQDIHLSTTLGFNMIEST*RSALFP Trigger: TGGAAAGAGTGCTGATCTCAATGTGGATTCAATCAT...ATTGAATCCCAGAGTAGTACTAAGATGGATGTCTTGTCTGCTGTACCAGCTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR CAA 90 bp | ATGCACTGTGGAAAAACCGTTGAACTTGATCTTATTCTGAGAGTTTCAAGGACAACACTGAAGAGATGTTaGTCCTTAGGAGGGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: MHCGKTVELDLILRVSRTTLKRC*SLGGLP Trigger: AGGAAGCCCTCCTAAGGACAAACATCTCTTCAGTGT...TGTCCTTGAAACTCTCAGAATAAGATCAAGTTCAACGGTTTTTCCACAGTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR CAA 90 bp | ATGCACTGTGGAAAAACCGTTGAACTTGATCTTATTCTGAGAGTTTCAAGGACATCAATATTACCAGGTTaGAAACTCCCTTCTATTGGC | + |
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Preference number: 5 (lower is better) Translates to: MHCGKTVELDLILRVSRTSILPG*KLPSIG Trigger: GCCAATAGAAGGGAGTTTCAAACCTGGTAATATTGA...TGTCCTTGAAACTCTCAGAATAAGATCAAGTTCAACGGTTTTTCCACAGTGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR CAA 90 bp | GAAACAAGCATGGTGGTTTTACAGGAAGCAAAAGATGTTCAGAGCTTAGCCAAATTTAGCTCAGTGTTCTaGTCTTTCAGACCATTCAAT | + |
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Preference number: 5 (lower is better) Translates to: ETSMVVLQEAKDVQSLAKFSSVF*SFRPFN Trigger: ATTGAATGGTCTGAAAGACAAGAACACTGAGCTAAA...TTTGGCTAAGCTCTGAACATCTTTTGCTTCCTGTAAAACCACCATGCTTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS-3UTR CAA 90 bp | CTTATTTCTATTATTCTCCATGGAAGCATGATGCAGAATGCACTGTGGAAAAACGCCATCAAAGTTATATaGACGAAGGAATCTGATAAC | + |
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Preference number: 5 (lower is better) Translates to: LISIILHGSMMQNALWKNAIKVI*TKESDN Trigger: GTTATCAGATTCCTTCGTCAATATAACTTTGATGGC...GTTTTTCCACAGTGCATTCTGCATCATGCTTCCATGGAGAATAATAGAAATAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS TCA 72 bp | TCAGAGGGAAATGTCTCTGGTGACAGAAAGAACCACTaGAGTCATCCATGTCCAGGGGCCAGACCACGGCAC | + |
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Preference number: 6 (lower is better) Translates to: SEGNVSGDRKNH*SHPCPGARPRH Trigger: GTGCCGTGGTCTGGCCCCTGGACATGGATGACTTCAGTGGTTCTTTCTGTCACCAGAGACATTTCCCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063062.9 ENSMUST00000149836.2 |
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| CDS CAA 90 bp | TCAAAAGCTTTACGCATTTCCTTCACCAGAACACTGAAGAGATGTTaGTCCTTAGGAGGGCTTCCTCGAGACCCAGGGTACTGCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SKALRISFTRTLKRC*SLGGLPRDPGYCQS Trigger: GGACTGGCAGTACCCTGGGTCTCGAGGAAGCCCTCCTAAGGACAAACATCTCTTCAGTGTTCTGGTGAAGGAAATGCGTAAAGCTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS GCA 72 bp | CTTAGAAGGGTCACTCAGGATAAAGGTATGCCCATATaGTGGAAATCCCACAATGAGCTTCTCAGAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LRRVTQDKGMPI*WKSHNELLRSC Trigger: GCAGCTTCTGAGAAGCTCATTGTGGGATTTCCAGCATATGGGCATACCTTTATCCTGAGTGACCCTTCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS GCA 72 bp | ATTCCAGTCTTAGAAGGGTCACTCAGGATAAAGGTATaGCCATATGCTGGAAATCCCACAATGAGCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: IPVLEGSLRIKV*PYAGNPTMSFS Trigger: TGAGAAGCTCATTGTGGGATTTCCAGCATATGGGCATACCTTTATCCTGAGTGACCCTTCTAAGACTGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS CAA 90 bp | GTTCTTGTCTTTCAGACCATTCAATGCTTCATAGTCACGCAAGTCTaGCTCATGTGTGTAAGTGATCTCATTATTCTGCATTCCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: VLVFQTIQCFIVTQV*LMCVSDLIILHSSK Trigger: TTTGCTGGAATGCAGAATAATGAGATCACTTACACACATGAGCAAGACTTGCGTGACTATGAAGCATTGAATGGTCTGAAAGACAAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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| CDS CAA 72 bp | TTTCAGACCATTCAATGCTTCATAGTCACGCAAGTCTaGCTCATGTGTGTAAGTGATCTCATTATTCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: FQTIQCFIVTQV*LMCVSDLIILH Trigger: ATGCAGAATAATGAGATCACTTACACACATGAGCAAGACTTGCGTGACTATGAAGCATTGAATGGTCTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063062.9 |
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