Pregenerated sensors for CHIL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064246Ensembl transcript IDs: ENSMUST00000082060.10, ENSMUST00000132873.8, ENSMUST00000133701.8, ENSMUST00000153856.8, ENSMUST00000156873.8
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTCTGATTCCCAAGTCTCAGAGAAAGAAATCCAGAAAAGATAGGTaGGTGCCATGGTCCCACGTACCCATAGAGACGGCCGCAATTATA | + |
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Preference number: 1 (lower is better) Translates to: ALIPKSQRKKSRKDR*VPWSHVPIETAAII Trigger: TATAATTGCGGCCGTCTCTATGGGTACGTGGGACCATGGCACTCACCTATCTTTTCTGGATTTCTTTCTCTGAGACTTGGGAATCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153856.8 |
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| 3UTR TCA 90 bp | CTTAGGGCCCAGGATTTTGCATCAAGACCTCAATTCTGTCAGCTCTaGTTCCCAAGTCTCAGAGAAAGAAATCCAGAAAAGATAGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LRAQDFASRPQFCQL*FPSLRERNPEKIGE Trigger: CTCACCTATCTTTTCTGGATTTCTTTCTCTGAGACTTGGGAATCAGAGCTGACAGAATTGAGGTCTTGATGCAAAATCCTGGGCCCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153856.8 |
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| 3UTR CAA 90 bp | TGGCCCCTTACACAGGTGCCAAGGGAAGGAGAAACTGAGGCTCAGTaGGGGGACTTAACATTGCAAGAGATTAAACTCCTGGCCAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: WPLTQVPREGETEAQ*GDLTLQEIKLLARE Trigger: CTCTCTGGCCAGGAGTTTAATCTCTTGCAATGTTAAGTCCCCCAACTGAGCCTCAGTTTCTCCTTCCCTTGGCACCTGTGTAAGGGGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCCCTGTTCTCCATAGCTaGGCCTGCTGTGGCCCCTTA | + |
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Preference number: 2 (lower is better) Translates to: GFAEGIISMVPQSCKIFAPVLHS*ACCGPL Trigger: TAAGGGGCCACAGCAGGCTCAGCTATGGAGAACAGG...GGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGCCTGTTCTCCATAGCTaGGCCTGCTGTGGCCCCTTA | + |
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Preference number: 2 (lower is better) Translates to: FKLGFAEGIISMVPQSCKPVLHS*ACCGPL Trigger: TAAGGGGCCACAGCAGGCTCAGCTATGGAGAACAGG...CTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR CAA 90 bp | AGAGACGGCCGCAATTATAGCACACCGTTAGGTTCTGGCGCTTTATaGAACAGCTGTGGAATTAGGGAAAGGGAAGTGGGACGATTAAGT | + |
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Preference number: 2 (lower is better) Translates to: RDGRNYSTPLGSGAL*NSCGIREREVGRLS Trigger: ACTTAATCGTCCCACTTCCCTTTCCCTAATTCCACAGCTGTTCAATAAAGCGCCAGAACCTAACGGTGTGCTATAATTGCGGCCGTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153856.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGGGCCCCTTACACAGGTaGCAAGGGAAGGAGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: FKLGFAEGIISMVPQSCKGPLHR*QGKEKL Trigger: CAGTTTCTCCTTCCCTTGGCACCTGTGTAAGGGGCC...CTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR CAA 90 bp | TGTCCTTTGGTCAGGCTGGGTAAAGGGAGGTTAGAGTCTGAGAATTaGCATTCCTTAACAGGGTTGTGTATCTGCTCACACTGTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: CPLVRLGKGRLESEN*HSLTGLCICSHCDS Trigger: AGAGTCACAGTGTGAGCAGATACACAACCCTGTTAAGGAATGCAAATTCTCAGACTCTAACCTCCCTTTACCCAGCCTGACCAAAGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGGCCCCTTACACAGGTaGCAAGGGAAGGAGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: KFLREGFKLGFAEGIISMGPLHR*QGKEKL Trigger: CAGTTTCTCCTTCCCTTGGCACCTGTGTAAGGGGCC...CATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGCTCCTGGCCAGAGAGTaGGGGTACCATATGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: AEGIISMVPQSCKIFAYLLLARE*GYHMGK Trigger: CTTTCCCATATGGTACCCCCACTCTCTGGCCAGGAG...CAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCCCAAGTGGTGTCCTTTaGTCAGGCTGGGTAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: FLREGFKLGFAEGIISMVPSGVL*SGWVKG Trigger: TCCCTTTACCCAGCCTGACCAAAGGACACCACTTGG...GACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCCCAAGTGGTGTCCTTTaGTCAGGCTGGGTAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GFAEGIISMVPQSCKIFAPSGVL*SGWVKG Trigger: TCCCTTTACCCAGCCTGACCAAAGGACACCACTTGG...GGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGAAGGGAAGGAGAAACTaGGGCTCAGTTGGGGGACTT | + |
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Preference number: 2 (lower is better) Translates to: KFLREGFKLGFAEGIISMKGRRN*GSVGGL Trigger: AAGTCCCCCAACTGAGCCTCAGTTTCTCCTTCCCTT...CATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR TCA 90 bp | ATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCCAAGTGCCTGTTCTCCATAGCTaGGCCTGCTGTGGCCCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: IISMVPQSCKIFAYLIQVPVLHS*ACCGPL Trigger: TAAGGGGCCACAGCAGGCTCAGCTATGGAGAACAGG...CACTTGGATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTATCTGCTCACACTGTaGCTCTCACAACCCCACCAT | + |
|
Preference number: 2 (lower is better) Translates to: GFAEGIISMVPQSCKIFAYLLTL*LSQPHH Trigger: ATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATA...GGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCCTCCTGGCCAGAGAGTaGGGGTACCATATGGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: EGIISMVPQSCKIFAYLILLARE*GYHMGK Trigger: CTTTCCCATATGGTACCCCCACTCTCTGGCCAGGAG...GATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCAAGGGAAGGAGAAACTaGGGCTCAGTTGGGGGACTT | + |
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Preference number: 2 (lower is better) Translates to: EGIISMVPQSCKIFAYLIKGRRN*GSVGGL Trigger: AAGTCCCCCAACTGAGCCTCAGTTTCTCCTTCCCTT...GATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACGATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAAGATATTTGCCTACTTaGTCCAAGTGGTGTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: GTIKFLREGFKLGFAEGIRYLPT*SKWCPL Trigger: CAAAGGACACCACTTGGATCAAGTAGGCAAATATCT...TATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAATCGTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR GCA 90 bp | ATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCCAAGTGGGCCCCTTACACAGGTaGCAAGGGAAGGAGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: IISMVPQSCKIFAYLIQVGPLHR*QGKEKL Trigger: CAGTTTCTCCTTCCCTTGGCACCTGTGTAAGGGGCC...CACTTGGATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGACAGGGTTGTGTATCTaGTCACACTGTGACTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: FKLGFAEGIISMVPQSCKTGLCI*SHCDSH Trigger: GTGAGAGTCACAGTGTGAGCAGATACACAACCCTGT...CTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR CCA 90 bp | ATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCCAAGTGCTCCTGGCCAGAGAGTaGGGGTACCATATGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: IISMVPQSCKIFAYLIQVLLARE*GYHMGK Trigger: CTTTCCCATATGGTACCCCCACTCTCTGGCCAGGAG...CACTTGGATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCTATCTGCTCACACTGTaGCTCTCACAACCCCACCAT | + |
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Preference number: 2 (lower is better) Translates to: EGIISMVPQSCKIFAYLIYLLTL*LSQPHH Trigger: ATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATA...GATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR TCA 90 bp | ATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCCAAGTGTATCTGCTCACACTGTaGCTCTCACAACCCCACCAT | + |
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Preference number: 2 (lower is better) Translates to: IISMVPQSCKIFAYLIQVYLLTL*LSQPHH Trigger: ATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATA...CACTTGGATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCAGGGAGGTTAGAGTCTaGGAATTTGCATTCCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: FLREGFKLGFAEGIISMVREVRV*EFAFLN Trigger: GTTAAGGAATGCAAATTCTCAGACTCTAACCTCCCT...GACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCAGGGAGGTTAGAGTCTaGGAATTTGCATTCCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: GFAEGIISMVPQSCKIFAREVRV*EFAFLN Trigger: GTTAAGGAATGCAAATTCTCAGACTCTAACCTCCCT...GGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCACAGGGTTGTGTATCTaGTCACACTGTGACTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: EGIISMVPQSCKIFAYLITGLCI*SHCDSH Trigger: GTGAGAGTCACAGTGTGAGCAGATACACAACCCTGT...GATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTAGGGAGGTTAGAGTCTaGGAATTTGCATTCCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: IKFLREGFKLGFAEGIISREVRV*EFAFLN Trigger: GTTAAGGAATGCAAATTCTCAGACTCTAACCTCCCT...ACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR CAA 90 bp | GGGACGATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATATCCAAGTGGTGTCCTTaGGTCAGGCTGGGTAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: GTIKFLREGFKLGFAEGISKWCP*VRLGKG Trigger: CCCTTTACCCAGCCTGACCAAAGGACACCACTTGGA...TATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAATCGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR GCA 72 bp | TCTGAGAATTTGCATTCCTTAACAGGGTTGTGTATCTaGTCACACTGTGACTCTCACAACCCCACCATCGTC | + |
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Preference number: 3 (lower is better) Translates to: SENLHSLTGLCI*SHCDSHNPTIV Trigger: GACGATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTGTTAAGGAATGCAAATTCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTCCAAGTGGTGTCCTTaGGTCAGGCTGGGTAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: FAEGIISMVPQSCKIFAYSKWCP*VRLGKG Trigger: CCCTTTACCCAGCCTGACCAAAGGACACCACTTGGA...GTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGGAAACTGAGGCTCAGTaGGGGGACTTAACATTGCAA | + |
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Preference number: 3 (lower is better) Translates to: FKLGFAEGIISMVPQSCKETEAQ*GDLTLQ Trigger: TTGCAATGTTAAGTCCCCCAACTGAGCCTCAGTTTC...CTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR CAA 90 bp | ATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTGAAACTGAGGCTCAGTaGGGGGACTTAACATTGCAA | + |
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Preference number: 3 (lower is better) Translates to: IKFLREGFKLGFAEGIISETEAQ*GDLTLQ Trigger: TTGCAATGTTAAGTCCCCCAACTGAGCCTCAGTTTC...ACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR CAA 90 bp | GAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCGAAACTGAGGCTCAGTaGGGGGACTTAACATTGCAA | + |
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Preference number: 3 (lower is better) Translates to: EGIISMVPQSCKIFAYLIETEAQ*GDLTLQ Trigger: TTGCAATGTTAAGTCCCCCAACTGAGCCTCAGTTTC...GATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR CAA 90 bp | AAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGCATTCCTTAACAGGGTaGTGTATCTGCTCACACTGT | + |
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Preference number: 3 (lower is better) Translates to: KFLREGFKLGFAEGIISMHSLTG*CICSHC Trigger: ACAGTGTGAGCAGATACACAACCCTGTTAAGGAATG...CATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR TCA 72 bp | CAGGATTTTGCATCAAGACCTCAATTCTGTCAGCTCTaGTTCCCAAGTCTCAGAGAAAGAAATCCAGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: QDFASRPQFCQL*FPSLRERNPEK Trigger: CTTTTCTGGATTTCTTTCTCTGAGACTTGGGAATCAGAGCTGACAGAATTGAGGTCTTGATGCAAAATCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153856.8 |
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| 3UTR-3UTR CAA 90 bp | ATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTCATTCCTTAACAGGGTaGTGTATCTGCTCACACTGT | + |
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Preference number: 3 (lower is better) Translates to: IKFLREGFKLGFAEGIISHSLTG*CICSHC Trigger: ACAGTGTGAGCAGATACACAACCCTGTTAAGGAATG...ACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCAAGATATTTGCCTACTaGATCCAAGTGGTGTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: FLREGFKLGFAEGIISMVKIFAY*IQVVSF Trigger: AAAGGACACCACTTGGATCAAGTAGGCAAATATCTT...GACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR GCA 90 bp | CAGGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCATCGTCCTACGTAGGCCAGGGTCCCTaGCTCCTTGGTGAACCGGCC | + |
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Preference number: 4 (lower is better) Translates to: QGCVSAHTVTLTTPPSSYVGQGP*LLGEPA Trigger: GGCCGGTTCACCAAGGAGGCAGGGACCCTGGCCTAC...GTAGGACGATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR CCA 90 bp | GGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCATCGTCCTACCCCCATCAGTAGCTTGCTaGCCTGGGCTCCCAGACGTA | + |
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Preference number: 4 (lower is better) Translates to: GLCICSHCDSHNPTIVLPPSVAC*PGLPDV Trigger: TACGTCTGGGAGCCCAGGCCAGCAAGCTACTGATGG...GGGTAGGACGATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR GCA 90 bp | GGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCATCGTCCTACCCTCCCAAAGGTGGGGATaGCCATCAGTAGCTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLCICSHCDSHNPTIVLPSQRWG*PSVACW Trigger: CCAGCAAGCTACTGATGGGCATCCCCACCTTTGGGA...GGGTAGGACGATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR GCA 90 bp | GGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCATCGTCCTACCCCCACACCATGGCTCCTaGCAGCTTCTTCTCCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: GLCICSHCDSHNPTIVLPPHHGS*QLLLLQ Trigger: CTGAAGGAGAAGAAGCTGGCAGGAGCCATGGTGTGG...GGGTAGGACGATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR CCA 90 bp | CAGGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCATCGTCCTACTACGCAGAGCAGCTCTaGAGCAGCATCAGGACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGCVSAHTVTLTTPPSSYYAEQL*SSIRTA Trigger: TGCGGTCCTGATGCTGCTCCAGAGCTGCTCTGCGTA...GTAGGACGATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCATCGTCCTACCCAACCTAGTGTCCTTCTaGCCTTGGAAGAGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLCICSHCDSHNPTIVLPNLVSF*PWKRGL Trigger: CAGCCCCCTCTTCCAAGGCCAGAAGGACACTAGGTT...GGGTAGGACGATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTGGGGGACTTAACATTGCAAGAGATTAAACTCCTGGCCAGAGAGTGGGGGGGCTGTGATGGCCTGTaGTTTGGCGCCAGACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLGDLTLQEIKLLAREWGGCDGL*FGARLH Trigger: ATGGAGTCTGGCGCCAAATCACAGGCCATCACAGCC...CCCCCACTCTCTGGCCAGGAGTTTAATCTCTTGCAATGTTAAGTCCCCCAACTG 54% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTGGGGGACTTAACATTGCAAGAGATTAAACTCCTGGCCAGAGAGTGGGGGTCCCTGCCTCCTTGGTaGACCGGCCTGGTAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLGDLTLQEIKLLAREWGSLPPW*TGLVIL Trigger: AAGGATTACCAGGCCGGTTCACCAAGGAGGCAGGGA...CCCCCACTCTCTGGCCAGGAGTTTAATCTCTTGCAATGTTAAGTCCCCCAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR CCA 90 bp | CAGTTGGGGGACTTAACATTGCAAGAGATTAAACTCCTGGCCAGAGAGTGGGGGTACGCAGAGCAGCTCTaGAGCAGCATCAGGACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLGDLTLQEIKLLAREWGYAEQL*SSIRTA Trigger: TGCGGTCCTGATGCTGCTCCAGAGCTGCTCTGCGTA...CCCCCACTCTCTGGCCAGGAGTTTAATCTCTTGCAATGTTAAGTCCCCCAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CCA 90 bp | CATTCCTTAACAGGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCTACGCAGAGCAGCTCTaGAGCAGCATCAGGACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSLTGLCICSHCDSHNPTYAEQL*SSIRTA Trigger: TGCGGTCCTGATGCTGCTCCAGAGCTGCTCTGCGTA...GGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTGTTAAGGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCATCGTCCTACCCGAGTTTCTCTCTGCCTaGCTGGACCTCCTTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLCICSHCDSHNPTIVLPEFLSA*LDLLCE Trigger: TTCACAAAGGAGGTCCAGCCAGGCAGAGAGAAACTC...GGGTAGGACGATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTGGGGGACTTAACATTGCAAGAGATTAAACTCCTGGCCAGAGAGTGGGGGAACCTAGTGTCCTTCTaGCCTTGGAAGAGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLGDLTLQEIKLLAREWGNLVSF*PWKRGL Trigger: CAGCCCCCTCTTCCAAGGCCAGAAGGACACTAGGTT...CCCCCACTCTCTGGCCAGGAGTTTAATCTCTTGCAATGTTAAGTCCCCCAACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCGTAGGCCAGGGTCCCTaGCTCCTTGGTGAACCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GFAEGIISMVPQSCKIFAVGQGP*LLGEPA Trigger: GGCCGGTTCACCAAGGAGGCAGGGACCCTGGCCTAC...GGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | CATTCCTTAACAGGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCCCACACCATGGCTCCTaGCAGCTTCTTCTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSLTGLCICSHCDSHNPTPHHGS*QLLLLQ Trigger: CTGAAGGAGAAGAAGCTGGCAGGAGCCATGGTGTGG...GGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTGTTAAGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CCA 90 bp | CATTCCTTAACAGGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCTCATACCCCACCCACTaGTTGCCCTTGGTAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSLTGLCICSHCDSHNPTSYPTH*LPLVAK Trigger: CTTCGCTACCAAGGGCAACCAGTGGGTGGGGTATGA...GGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTGTTAAGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTGGGGGACTTAACATTGCAAGAGATTAAACTCCTGGCCAGAGAGTGGGGGTGGCAAAGCTGTAGATaGTGTGGGTGCACAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QLGDLTLQEIKLLAREWGWQSCR*CGCTGK Trigger: CTTTCCTGTGCACCCACATCATCTACAGCTTTGCCA...CCCCCACTCTCTGGCCAGGAGTTTAATCTCTTGCAATGTTAAGTCCCCCAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGGTAGGCCAGGGTCCCTaGCTCCTTGGTGAACCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AEGIISMVPQSCKIFAYLVGQGP*LLGEPA Trigger: GGCCGGTTCACCAAGGAGGCAGGGACCCTGGCCTAC...CAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTGGGGGACTTAACATTGCAAGAGATTAAACTCCTGGCCAGAGAGTGGGGGTTCTCTCTGCCTGGCTaGACCTCCTTTGTGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLGDLTLQEIKLLAREWGFSLPG*TSFVNS Trigger: GGAATTCACAAAGGAGGTCCAGCCAGGCAGAGAGAA...CCCCCACTCTCTGGCCAGGAGTTTAATCTCTTGCAATGTTAAGTCCCCCAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR CAA 72 bp | GAAGGAGAAACTGAGGCTCAGTTGGGGGACTTAACATaGCAAGAGATTAAACTCCTGGCCAGAGAGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGETEAQLGDLT*QEIKLLAREWG Trigger: CCCCCACTCTCTGGCCAGGAGTTTAATCTCTTGCAATGTTAAGTCCCCCAACTGAGCCTCAGTTTCTCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR TCA 90 bp | CAGTTGGGGGACTTAACATTGCAAGAGATTAAACTCCTGGCCAGAGAGTGGGGGGTACTTCAGCTCCTTTaGGGAAGTCGCATATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QLGDLTLQEIKLLAREWGVLQLL*GSRISR Trigger: ACGAGATATGCGACTTCCTCAAAGGAGCTGAAGTAC...CCCCCACTCTCTGGCCAGGAGTTTAATCTCTTGCAATGTTAAGTCCCCCAACTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR GCA 90 bp | GGGACGATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAGCAGGAGTTTCTCTCTaGCTGGCTGGACCTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTIKFLREGFKLGFAEGIAGVSL*LAGPPL Trigger: CAAAGGAGGTCCAGCCAGGCAGAGAGAAACTCCTGC...TATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAATCGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CCA 90 bp | CATTCCTTAACAGGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCTTCTCTCTGCCTGGCTaGACCTCCTTTGTGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSLTGLCICSHCDSHNPTFSLPG*TSFVNS Trigger: GGAATTCACAAAGGAGGTCCAGCCAGGCAGAGAGAA...GGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTGTTAAGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR CCA 90 bp | CATTCCTTAACAGGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCGAGTTTCTCTCTGCCTaGCTGGACCTCCTTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSLTGLCICSHCDSHNPTEFLSA*LDLLCE Trigger: TTCACAAAGGAGGTCCAGCCAGGCAGAGAGAAACTC...GGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTGTTAAGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCGGCTGTGATGGCCTGTaGTTTGGCGCCAGACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLREGFKLGFAEGIISMVGCDGL*FGARLH Trigger: ATGGAGTCTGGCGCCAAATCACAGGCCATCACAGCC...GACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR TCA 90 bp | TTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCTCCCTGCCTCCTTGGTaGACCGGCCTGGTAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLREGFKLGFAEGIISMVSLPPW*TGLVIL Trigger: AAGGATTACCAGGCCGGTTCACCAAGGAGGCAGGGA...GACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR TCA 90 bp | TTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGTCCCTGCCTCCTTGGTaGACCGGCCTGGTAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKLGFAEGIISMVPQSCKSLPPW*TGLVIL Trigger: AAGGATTACCAGGCCGGTTCACCAAGGAGGCAGGGA...CTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR GCA 90 bp | CATTCCTTAACAGGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCAGGGTGGAGAAATACTaGTTGTCTCTTAAGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLTGLCICSHCDSHNPTRVEKY*LSLKRG Trigger: CCCTCGCTTAAGAGACAAGCAGTATTTCTCCACCCT...GGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTGTTAAGGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR CCA 90 bp | TTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGCCATCAGTAGCTTGCTaGCCTGGGCTCCCAGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: FKLGFAEGIISMVPQSCKPSVAC*PGLPDV Trigger: TACGTCTGGGAGCCCAGGCCAGCAAGCTACTGATGG...CTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| 3UTR CAA 72 bp | ACACAGGTGCCAAGGGAAGGAGAAACTGAGGCTCAGTaGGGGGACTTAACATTGCAAGAGATTAAACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQVPREGETEAQ*GDLTLQEIKLL Trigger: CAGGAGTTTAATCTCTTGCAATGTTAAGTCCCCCAACTGAGCCTCAGTTTCTCCTTCCCTTGGCACCTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR TCA 90 bp | GGGACGATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATATGGCAAAGCTGTAGATaGTGTGGGTGCACAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GTIKFLREGFKLGFAEGIWQSCR*CGCTGK Trigger: CTTTCCTGTGCACCCACATCATCTACAGCTTTGCCA...TATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAATCGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR TCA 90 bp | AAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGGCTGTGATGGCCTGTaGTTTGGCGCCAGACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KFLREGFKLGFAEGIISMGCDGL*FGARLH Trigger: ATGGAGTCTGGCGCCAAATCACAGGCCATCACAGCC...CATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR CCA 90 bp | GGGACGATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAGAGTTTCTCTCTGCCTaGCTGGACCTCCTTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTIKFLREGFKLGFAEGIEFLSA*LDLLCE Trigger: TTCACAAAGGAGGTCCAGCCAGGCAGAGAGAAACTC...TATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAATCGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR CCA 90 bp | GGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTCATACCCCACCCACTaGTTGCCCTTGGTAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GFAEGIISMVPQSCKIFASYPTH*LPLVAK Trigger: CTTCGCTACCAAGGGCAACCAGTGGGTGGGGTATGA...GGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTGCATCAAGACCTCAATTCTGTCAGCTCTGATTCCCAAGTCTCAGAGAAAACCGGACGAAAGCAGTaGGTCTCTCAGTGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILHQDLNSVSSDSQVSEKTGRKQ*VSQCWR Trigger: CCTCCAACACTGAGAGACGCACTGCTTTCGTCCGGT...TTTCTCTGAGACTTGGGAATCAGAGCTGACAGAATTGAGGTCTTGATGCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153856.8 |
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| CDS-3UTR GCA 90 bp | GCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGACCGGACGAAAGCAGTaGGTCTCTCAGTGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AEGIISMVPQSCKIFAYLTGRKQ*VSQCWR Trigger: CCTCCAACACTGAGAGACGCACTGCTTTCGTCCGGT...CAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGGCAGGAGTTTCTCTCTaGCTGGCTGGACCTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AEGIISMVPQSCKIFAYLAGVSL*LAGPPL Trigger: CAAAGGAGGTCCAGCCAGGCAGAGAGAAACTCCTGC...CAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGTCCCAAAGGTGGGGATaGCCATCAGTAGCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AEGIISMVPQSCKIFAYLSQRWG*PSVACW Trigger: CCAGCAAGCTACTGATGGGCATCCCCACCTTTGGGA...CAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCCCATCAGTAGCTTGCTaGCCTGGGCTCCCAGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: EGIISMVPQSCKIFAYLIPSVAC*PGLPDV Trigger: TACGTCTGGGAGCCCAGGCCAGCAAGCTACTGATGG...GATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGTCATACCCCACCCACTaGTTGCCCTTGGTAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KFLREGFKLGFAEGIISMSYPTH*LPLVAK Trigger: CTTCGCTACCAAGGGCAACCAGTGGGTGGGGTATGA...CATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| 3UTR CAA 72 bp | GTCAGGCTGGGTAAAGGGAGGTTAGAGTCTGAGAATTaGCATTCCTTAACAGGGTTGTGTATCTGCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VRLGKGRLESEN*HSLTGLCICSH Trigger: GTGTGAGCAGATACACAACCCTGTTAAGGAATGCAAATTCTCAGACTCTAACCTCCCTTTACCCAGCCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCGCAGGAGTTTCTCTCTaGCTGGCTGGACCTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EGIISMVPQSCKIFAYLIAGVSL*LAGPPL Trigger: CAAAGGAGGTCCAGCCAGGCAGAGAGAAACTCCTGC...GATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTCCCAAAGGTGGGGATaGCCATCAGTAGCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FAEGIISMVPQSCKIFAYSQRWG*PSVACW Trigger: CCAGCAAGCTACTGATGGGCATCCCCACCTTTGGGA...GTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | ATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTCCACACCATGGCTCCTaGCAGCTTCTTCTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IKFLREGFKLGFAEGIISPHHGS*QLLLLQ Trigger: CTGAAGGAGAAGAAGCTGGCAGGAGCCATGGTGTGG...ACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| 3UTR CAA 72 bp | AGGTTAGAGTCTGAGAATTTGCATTCCTTAACAGGGTaGTGTATCTGCTCACACTGTGACTCTCACAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLESENLHSLTG*CICSHCDSHNP Trigger: GGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTGTTAAGGAATGCAAATTCTCAGACTCTAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGTGGCAAAGCTGTAGATaGTGTGGGTGCACAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AEGIISMVPQSCKIFAYLWQSCR*CGCTGK Trigger: CTTTCCTGTGCACCCACATCATCTACAGCTTTGCCA...CAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGGCTGGACCTCCTTTGTaGATTCCGCATTCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AEGIISMVPQSCKIFAYLAGPPL*IPHSVP Trigger: AGGAACTGAATGCGGAATTCACAAAGGAGGTCCAGC...CAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | ATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCCAAGTGACCGGACGAAAGCAGTaGGTCTCTCAGTGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IISMVPQSCKIFAYLIQVTGRKQ*VSQCWR Trigger: CCTCCAACACTGAGAGACGCACTGCTTTCGTCCGGT...CACTTGGATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCAGGGTGGAGAAATACTaGTTGTCTCTTAAGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLREGFKLGFAEGIISMVRVEKY*LSLKRG Trigger: CCCTCGCTTAAGAGACAAGCAGTATTTCTCCACCCT...GACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CCA 90 bp | ATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCCAAGTGAACCTAGTGTCCTTCTaGCCTTGGAAGAGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IISMVPQSCKIFAYLIQVNLVSF*PWKRGL Trigger: CAGCCCCCTCTTCCAAGGCCAGAAGGACACTAGGTT...CACTTGGATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| 3UTR CAA 72 bp | AGTGGGACGATTAAGTTCCTAAGGGAAGGATTCAAGTaGGGCTTTGCAGAGGGTATAATTAGTATGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGTIKFLREGFK*GFAEGIISMVP Trigger: AGGGACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAATCGTCCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR TCA 90 bp | ATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTGCTGGACCTCCTTTGTaGATTCCGCATTCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IKFLREGFKLGFAEGIISAGPPL*IPHSVP Trigger: AGGAACTGAATGCGGAATTCACAAAGGAGGTCCAGC...ACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGGTACTTCAGCTCCTTTaGGGAAGTCGCATATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: AEGIISMVPQSCKIFAYLVLQLL*GSRISR Trigger: ACGAGATATGCGACTTCCTCAAAGGAGCTGAAGTAC...CAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGCTGATTTTCAGAAGATaGCAGAGTGAAGCTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FKLGFAEGIISMVPQSCKLIFRR*QSEALP Trigger: GGGAAGAGCTTCACTCTGGCATCTTCTGAAAATCAG...CTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCCTGATTTTCAGAAGATaGCAGAGTGAAGCTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GFAEGIISMVPQSCKIFALIFRR*QSEALP Trigger: GGGAAGAGCTTCACTCTGGCATCTTCTGAAAATCAG...GGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCCATAGCCAGTGTCAATaGCCACCTTTCCTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: EGIISMVPQSCKIFAYLIHSQCQ*PPFLLT Trigger: TGTCAGCAGGAAAGGTGGCCATTGACACTGGCTATG...GATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTCATAGCCAGTGTCAATaGCCACCTTTCCTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: IKFLREGFKLGFAEGIISHSQCQ*PPFLLT Trigger: TGTCAGCAGGAAAGGTGGCCATTGACACTGGCTATG...ACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCGTACTTCAGCTCCTTTaGGGAAGTCGCATATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EGIISMVPQSCKIFAYLIVLQLL*GSRISR Trigger: ACGAGATATGCGACTTCCTCAAAGGAGCTGAAGTAC...GATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGACCCAACCTTGTTTTTaGCACTCTCCTTGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AEGIISMVPQSCKIFAYLTQPCF*HSPCPH Trigger: ATGAGGACAAGGAGAGTGTCAAAAACAAGGTTGGGT...CAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CCA 90 bp | ATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCCAAGTGCATAGCCAGTGTCAATaGCCACCTTTCCTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: IISMVPQSCKIFAYLIQVHSQCQ*PPFLLT Trigger: TGTCAGCAGGAAAGGTGGCCATTGACACTGGCTATG...CACTTGGATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR TCA 90 bp | ATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTACCCAACCTTGTTTTTaGCACTCTCCTTGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IKFLREGFKLGFAEGIISTQPCF*HSPCPH Trigger: ATGAGGACAAGGAGAGTGTCAAAAACAAGGTTGGGT...ACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCCTGATTTTCAGAAGATaGCAGAGTGAAGCTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EGIISMVPQSCKIFAYLILIFRR*QSEALP Trigger: GGGAAGAGCTTCACTCTGGCATCTTCTGAAAATCAG...GATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR TCA 90 bp | ATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCCAAGTGACCCAACCTTGTTTTTaGCACTCTCCTTGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IISMVPQSCKIFAYLIQVTQPCF*HSPCPH Trigger: ATGAGGACAAGGAGAGTGTCAAAAACAAGGTTGGGT...CACTTGGATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | GGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCATCGTCCTACCCAGTGTCCTTCTGGCCTaGGAAGAGGGGGCTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GLCICSHCDSHNPTIVLPSVLLA*EEGAVM Trigger: CATCACAGCCCCCTCTTCCAAGGCCAGAAGGACACT...GGGTAGGACGATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCATCGTCCTACAGGGTCCCTGCCTCCTaGGTGAACCGGCCTGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: QGCVSAHTVTLTTPPSSYRVPAS*VNRPGN Trigger: ATTACCAGGCCGGTTCACCAAGGAGGCAGGGACCCT...GTAGGACGATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS GCA 90 bp | GAATTCCTTCGGCTGACAGGTGCCCTGGAAATCATCCAAATCCAGTaGCCACACCATGGCTCCTGCCAGCTTCTTCTCCTTCAGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: EFLRLTGALEIIQIQ*PHHGSCQLLLLQEP Trigger: GGGTTCCTGAAGGAGAAGAAGCTGGCAGGAGCCATGGTGTGGGCACTGGATTTGGATGATTTCCAGGGCACCTGTCAGCCGAAGGAATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS TCA 90 bp | CGAAGGGAACCTTCTCGTTGGAGAGTCGATGTACTTCAGCTCCTTTaGGGAAGTCGCATATCTCGTAGTAGGCCAGGGTCCCTGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RREPSRWRVDVLQLL*GSRISRSRPGSLPP Trigger: AGGAGGCAGGGACCCTGGCCTACTACGAGATATGCGACTTCCTCAAAGGAGCTGAAGTACATCGACTCTCCAACGAGAAGGTTCCCTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTGGGGGACTTAACATTGCAAGAGATTAAACTCCTGGCCAGAGAGTGGGGGAGTGTCCTTCTGGCCTaGGAAGAGGGGGCTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QLGDLTLQEIKLLAREWGSVLLA*EEGAVM Trigger: CATCACAGCCCCCTCTTCCAAGGCCAGAAGGACACT...CCCCCACTCTCTGGCCAGGAGTTTAATCTCTTGCAATGTTAAGTCCCCCAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | CATTCCTTAACAGGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCATGCCCATCAGTAGCTaGCTGGCCTGGGCTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HSLTGLCICSHCDSHNPTMPISS*LAWAPR Trigger: TCTGGGAGCCCAGGCCAGCAAGCTACTGATGGGCAT...GGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTGTTAAGGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | CATTCCTTAACAGGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCAGGGTCCCTGCCTCCTaGGTGAACCGGCCTGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: HSLTGLCICSHCDSHNPTRVPAS*VNRPGN Trigger: ATTACCAGGCCGGTTCACCAAGGAGGCAGGGACCCT...GGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTGTTAAGGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS TCA 90 bp | GTGAACCGGCCTGGTAATCCTTCCCCTGAGATTGGAGCTCCCAACTaGTTTTCAGAAGATGCCAGAGTGAAGCTCTTCCCAAAGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VNRPGNPSPEIGAPN*FSEDARVKLFPKVG Trigger: CCCCACCTTTGGGAAGAGCTTCACTCTGGCATCTTCTGAAAATCAGTTGGGAGCTCCAATCTCAGGGGAAGGATTACCAGGCCGGTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS CCA 90 bp | GCTGACAGGTGCCCTGGAAATCATCCAAATCCAGTGCCCACACCATaGCTCCTGCCAGCTTCTTCTCCTTCAGGAACCCAACCTTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ADRCPGNHPNPVPTP*LLPASSPSGTQPCF Trigger: AAAACAAGGTTGGGTTCCTGAAGGAGAAGAAGCTGGCAGGAGCCATGGTGTGGGCACTGGATTTGGATGATTTCCAGGGCACCTGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | GGGACGATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATGCCCATCAGTAGCTaGCTGGCCTGGGCTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTIKFLREGFKLGFAEGIMPISS*LAWAPR Trigger: TCTGGGAGCCCAGGCCAGCAAGCTACTGATGGGCAT...TATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAATCGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCATCGTCCTACTTTTTGACACTCTCCTaGTCCTCATACCCCACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QGCVSAHTVTLTTPPSSYFLTLS*SSYPTH Trigger: GTGGGTGGGGTATGAGGACAAGGAGAGTGTCAAAAA...GTAGGACGATGGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTGGGGGACTTAACATTGCAAGAGATTAAACTCCTGGCCAGAGAGTGGGGGTTTTTGACACTCTCCTaGTCCTCATACCCCACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QLGDLTLQEIKLLAREWGFLTLS*SSYPTH Trigger: GTGGGTGGGGTATGAGGACAAGGAGAGTGTCAAAAA...CCCCCACTCTCTGGCCAGGAGTTTAATCTCTTGCAATGTTAAGTCCCCCAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | CATTCCTTAACAGGGTTGTGTATCTGCTCACACTGTGACTCTCACAACCCCACCTCCGCATTCAGTTCCTaGATCAGGGTGGAGAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: HSLTGLCICSHCDSHNPTSAFSS*IRVEKY Trigger: GTATTTCTCCACCCTGATCAAGGAACTGAATGCGGA...GGTGGGGTTGTGAGAGTCACAGTGTGAGCAGATACACAACCCTGTTAAGGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | GCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATGCCCATCAGTAGCTaGCTGGCCTGGGCTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AEGIISMVPQSCKIFAYLMPISS*LAWAPR Trigger: TCTGGGAGCCCAGGCCAGCAAGCTACTGATGGGCAT...CAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCGCATCCTTGATGGCGTaGGTGAGCGGGAAGAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLREGFKLGFAEGIISMVASLMA*VSGKNS Trigger: GGAATTCTTCCCGCTCACCAACGCCATCAAGGATGC...GACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | ATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTAGTGTCCTTCTGGCCTaGGAAGAGGGGGCTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: IKFLREGFKLGFAEGIISSVLLA*EEGAVM Trigger: CATCACAGCCCCCTCTTCCAAGGCCAGAAGGACACT...ACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTGCATCAAGACCTCAATTCTGTCAGCTCTGATTCCCAAGTCTCAGAGAAAGCATCCTTGATGGCGTaGGTGAGCGGGAAGAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILHQDLNSVSSDSQVSEKASLMA*VSGKNS Trigger: GGAATTCTTCCCGCTCACCAACGCCATCAAGGATGC...TTTCTCTGAGACTTGGGAATCAGAGCTGACAGAATTGAGGTCTTGATGCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153856.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGCATCCTTGATGGCGTaGGTGAGCGGGAAGAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: KFLREGFKLGFAEGIISMASLMA*VSGKNS Trigger: GGAATTCTTCCCGCTCACCAACGCCATCAAGGATGC...CATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS CCA 90 bp | TTTCGCCAAATTTCCACCCTCCAACAGACAGGAGGGTCTTCAGGTTaGTGTTTCTGGTCTTCAGTTTATTCAGCTTGTCATAGTTCGACT | + |
|
Preference number: 5 (lower is better) Translates to: FRQISTLQQTGGSSG*CFWSSVYSACHSST Trigger: AGTCGAACTATGACAAGCTGAATAAACTGAAGACCAGAAACACCAACCTGAAGACCCTCCTGTCTGTTGGAGGGTGGAAATTTGGCGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000082060.10 ENSMUST00000132873.8 ENSMUST00000133701.8 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | GGGACGATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAAACCCAACCTTGTTTTaGACACTCTCCTTGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTIKFLREGFKLGFAEGINPTLF*TLSLSS Trigger: TGAGGACAAGGAGAGTGTCAAAAACAAGGTTGGGTT...TATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAATCGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTGCGTCTCTCAGTGTaGGAGGCAATCTCGGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KFLREGFKLGFAEGIISMVRLSV*EAISEN Trigger: ATTTTCCGAGATTGCCTCCAACACTGAGAGACGCAC...CATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCGTGCGTCTCTCAGTGTaGGAGGCAATCTCGGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: EGIISMVPQSCKIFAYLIVRLSV*EAISEN Trigger: ATTTTCCGAGATTGCCTCCAACACTGAGAGACGCAC...GATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTATGGTCAACCCAACCTTGTTTTaGACACTCTCCTTGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLREGFKLGFAEGIISMVNPTLF*TLSLSS Trigger: TGAGGACAAGGAGAGTGTCAAAAACAAGGTTGGGTT...GACCATACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | ATTAAGTTCCTAAGGGAAGGATTCAAGTTGGGCTTTGCAGAGGGTATAATTAGTTCCGCATTCAGTTCCTaGATCAGGGTGGAGAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: IKFLREGFKLGFAEGIISSAFSS*IRVEKY Trigger: GTATTTCTCCACCCTGATCAAGGAACTGAATGCGGA...ACTAATTATACCCTCTGCAAAGCCCAACTTGAATCCTTCCCTTAGGAACTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTCCGCATTCAGTTCCTaGATCAGGGTGGAGAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: FAEGIISMVPQSCKIFAYSAFSS*IRVEKY Trigger: GTATTTCTCCACCCTGATCAAGGAACTGAATGCGGA...GTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR CAA 90 bp | ATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACTTGATCCAAGTGTTTTTGACACTCTCCTaGTCCTCATACCCCACCCAC | + |
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Preference number: 5 (lower is better) Translates to: IISMVPQSCKIFAYLIQVFLTLS*SSYPTH Trigger: GTGGGTGGGGTATGAGGACAAGGAGAGTGTCAAAAA...CACTTGGATCAAGTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS-3UTR CAA 90 bp | TTTGCAGAGGGTATAATTAGTATGGTCCCTCAATCCTGTAAGATATTTGCCTACAACCCAACCTTGTTTTaGACACTCTCCTTGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: FAEGIISMVPQSCKIFAYNPTLF*TLSLSS Trigger: TGAGGACAAGGAGAGTGTCAAAAACAAGGTTGGGTT...GTAGGCAAATATCTTACAGGATTGAGGGACCATACTAATTATACCCTCTGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS CCA 72 bp | TCTTCCCAAAGGTGGGGATGCCCATCAGTAGCTTGCTaGCCTGGGCTCCCAGACGTATCATGTACTGCACGG | + |
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Preference number: 6 (lower is better) Translates to: SSQRWGCPSVAC*PGLPDVSCTAR Trigger: CCGTGCAGTACATGATACGTCTGGGAGCCCAGGCCAGCAAGCTACTGATGGGCATCCCCACCTTTGGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS TCA 72 bp | TGTCAATGGCCACCTTTCCTGCTGACAAAGCTGCGCTaGGCAGGAGTTTCTCTCTGCCTGGCTGGACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CQWPPFLLTKLR*AGVSLCLAGPP Trigger: AGGAGGTCCAGCCAGGCAGAGAGAAACTCCTGCTCAGCGCAGCTTTGTCAGCAGGAAAGGTGGCCATTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS GCA 72 bp | AACGCAGGAACGGGGCTACCGACCGGACGAAAGCAGTaGGTCTCTCAGTGTTGGAGGCAATCTCGGAAAATC | + |
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Preference number: 6 (lower is better) Translates to: NAGTGLPTGRKQ*VSQCWRQSRKI Trigger: GATTTTCCGAGATTGCCTCCAACACTGAGAGACGCACTGCTTTCGTCCGGTCGGTAGCCCCGTTCCTGCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000082060.10 ENSMUST00000132873.8 ENSMUST00000133701.8 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS GCA 72 bp | AGCTCTTCCCAAAGGTGGGGATGCCCATCAGTAGCTTaGTGGCCTGGGCTCCCAGACGTATCATGTACTGCA | + |
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Preference number: 6 (lower is better) Translates to: SSSQRWGCPSVA*WPGLPDVSCTA Trigger: TGCAGTACATGATACGTCTGGGAGCCCAGGCCAGCAAGCTACTGATGGGCATCCCCACCTTTGGGAAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS CAA 72 bp | AAGCTCTTCCCAAAGGTGGGGATGCCCATCAGTAGCTaGCTGGCCTGGGCTCCCAGACGTATCATGTACTGC | + |
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Preference number: 6 (lower is better) Translates to: KLFPKVGMPISS*LAWAPRRIMYC Trigger: GCAGTACATGATACGTCTGGGAGCCCAGGCCAGCAAGCTACTGATGGGCATCCCCACCTTTGGGAAGAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS TCA 72 bp | TTGATGGCGTTGGTGAGCGGGAAGAATTCCTTCGGCTaGCAGGTGCCCTGGAAATCATCCAAATCCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LMALVSGKNSFG*QVPWKSSKSSA Trigger: GGCACTGGATTTGGATGATTTCCAGGGCACCTGTCAGCCGAAGGAATTCTTCCCGCTCACCAACGCCATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS TCA 72 bp | CCTTCTCGTTGGAGAGTCGATGTACTTCAGCTCCTTTaGGGAAGTCGCATATCTCGTAGTAGGCCAGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PSRWRVDVLQLL*GSRISRSRPGS Trigger: GGACCCTGGCCTACTACGAGATATGCGACTTCCTCAAAGGAGCTGAAGTACATCGACTCTCCAACGAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS CAA 72 bp | ATTGCTGTATCTGTCAAACCTAGTGTCCTTCTGGCCTaGGAAGAGGGGGCTGTGATGGCCTGTGATTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: IAVSVKPSVLLA*EEGAVMACDLA Trigger: CGCCAAATCACAGGCCATCACAGCCCCCTCTTCCAAGGCCAGAAGGACACTAGGTTTGACAGATACAGCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS CAA 72 bp | CACTGGTTGCCCTTGGTAGCGAAGGGAACCTTCTCGTaGGAGAGTCGATGTACTTCAGCTCCTTTGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: HWLPLVAKGTFS*ESRCTSAPLRK Trigger: CTTCCTCAAAGGAGCTGAAGTACATCGACTCTCCAACGAGAAGGTTCCCTTCGCTACCAAGGGCAACCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS CAA 72 bp | GCTCCTGCCAGCTTCTTCTCCTTCAGGAACCCAACCTaGTTTTTGACACTCTCCTTGTCCTCATACCCCACC | + |
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Preference number: 6 (lower is better) Translates to: APASFFSFRNPT*FLTLSLSSYPT Trigger: GGTGGGGTATGAGGACAAGGAGAGTGTCAAAAACAAGGTTGGGTTCCTGAAGGAGAAGAAGCTGGCAGGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS CAA 90 bp | ATAGTTCACATTGCTGTATCTGTCAAACCTAGTGTCCTTCTGGCCTaGGAAGAGGGGGCTGTGATGGCCTGTGATTTGGCGCCAGACTCC | + |
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Preference number: 6 (lower is better) Translates to: IVHIAVSVKPSVLLA*EEGAVMACDLAPDS Trigger: GGAGTCTGGCGCCAAATCACAGGCCATCACAGCCCCCTCTTCCAAGGCCAGAAGGACACTAGGTTTGACAGATACAGCAATGTGAACTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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| CDS TCA 72 bp | CCTGGTAATCCTTCCCCTGAGATTGGAGCTCCCAACTaGTTTTCAGAAGATGCCAGAGTGAAGCTCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: PGNPSPEIGAPN*FSEDARVKLFP Trigger: TGGGAAGAGCTTCACTCTGGCATCTTCTGAAAATCAGTTGGGAGCTCCAATCTCAGGGGAAGGATTACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082060.10 ENSMUST00000153856.8 ENSMUST00000156873.8 |
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