Pregenerated sensors for CHIC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029229Ensembl transcript IDs: ENSMUST00000075452.7
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGGGAGGTGCTCCCTCACTCTGCCTCTGGCTGGAGCCAGTTCCTaGAGCTGGCCTGAAGGCAGCCTACAGACTGCACTCACGCATTTC | + |
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Preference number: 1 (lower is better) Translates to: RGRCSLTLPLAGASS*SWPEGSLQTALTHF Trigger: GAAATGCGTGAGTGCAGTCTGTAGGCTGCCTTCAGGCCAGCTGCAGGAACTGGCTCCAGCCAGAGGCAGAGTGAGGGAGCACCTCCCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR GCA 90 bp | ATACAGCAACTAGCCATAGCCTCCAGAGTGCTGGTCTCCCAGGCCTaGACCAGGCCCTGGGGGAGGGAATCTTCTGTTGGAGATTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: IQQLAIASRVLVSQA*TRPWGRESSVGDWL Trigger: CAACCAATCTCCAACAGAAGATTCCCTCCCCCAGGGCCTGGTGCAGGCCTGGGAGACCAGCACTCTGGAGGCTATGGCTAGTTGCTGTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR CCA 90 bp | AGGTGCTCCCTCACTCTGCCTCTGGCTGGAGCCAGTTCCTGCAGCTaGCCTGAAGGCAGCCTACAGACTGCACTCACGCATTTCTTCATT | + |
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Preference number: 1 (lower is better) Translates to: RCSLTLPLAGASSCS*PEGSLQTALTHFFI Trigger: AATGAAGAAATGCGTGAGTGCAGTCTGTAGGCTGCCTTCAGGCCAGCTGCAGGAACTGGCTCCAGCCAGAGGCAGAGTGAGGGAGCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR TCA 90 bp | GGAGCACAGCTTCCTCACTGCCCTGTCCACTGGAACTCAGGAGCCTaGAGCCACGCTATGCTGAGCCTGAACTCTAGTAACCGTAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: GAQLPHCPVHWNSGA*SHAMLSLNSSNRRN Trigger: GTTCCTACGGTTACTAGAGTTCAGGCTCAGCATAGCGTGGCTTCAGGCTCCTGAGTTCCAGTGGACAGGGCAGTGAGGAAGCTGTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR CCA 90 bp | GCCATAGCCTCCAGAGTGCTGGTCTCCCAGGCCTGCACCAGGCCCTaGGGGAGGGAATCTTCTGTTGGAGATTGGTTGATACTGTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: AIASRVLVSQACTRP*GRESSVGDWLILFL Trigger: AAGAAACAGTATCAACCAATCTCCAACAGAAGATTCCCTCCCCCAGGGCCTGGTGCAGGCCTGGGAGACCAGCACTCTGGAGGCTATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR GCA 90 bp | GTAATCTATGGTGTGTCAGTTTGGGCTCCAAAAGTGGGTGGTCTTTaGAGAGGGAGGTGCTCCCTCACTCTGCCTCTGGCTGGAGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: VIYGVSVWAPKVGGL*RGRCSLTLPLAGAS Trigger: ACTGGCTCCAGCCAGAGGCAGAGTGAGGGAGCACCTCCCTCTGCAAAGACCACCCACTTTTGGAGCCCAAACTGACACACCATAGATTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR TCA 90 bp | TGTGTAAATATGTGCCCCACAGCAGTCCTTTGGGCTTTTATGTACTaGGGCTCAGCCTGGAGTCACCTGCTCACGGAGCTCCTGAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: CVNMCPTAVLWAFMY*GSAWSHLLTELLSA Trigger: AGCACTCAGGAGCTCCGTGAGCAGGTGACTCCAGGCTGAGCCTCAGTACATAAAAGCCCAAAGGACTGCTGTGGGGCACATATTTACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR GCA 90 bp | ACAAGTCCTCCTGCCTATGTCCCCACTGAGCATCTTACACGTGACTaGAGTGGGAGCTCCAAAACCTATGTGGCTAGCCTGTGTGTACAA | + |
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Preference number: 1 (lower is better) Translates to: TSPPAYVPTEHLTRD*SGSSKTYVASLCVQ Trigger: TTGTACACACAGGCTAGCCACATAGGTTTTGGAGCTCCCACTGCAGTCACGTGTAAGATGCTCAGTGGGGACATAGGCAGGAGGACTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR GCA 90 bp | CACTCTGTAGCCCAAGCCCGGGCTAGCTTTGAACTCAAATCCTCATaGCTTAACCTTTCCAATGTGGGTATGACAGGGGCGCATTCCTAC | + |
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Preference number: 1 (lower is better) Translates to: HSVAQARASFELKSS*LNLSNVGMTGAHSY Trigger: GTAGGAATGCGCCCCTGTCATACCCACATTGGAAAGGTTAAGGCATGAGGATTTGAGTTCAAAGCTAGCCCGGGCTTGGGCTACAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR CCA 90 bp | GGTCTCCCAGGCCTGCACCAGGCCCTGGGGGAGGGAATCTTCTGTTaGAGATTGGTTGATACTGTTTCTTTACACAACAGTAACAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: GLPGLHQALGEGIFC*RLVDTVSLHNSNRA Trigger: TGCTCTGTTACTGTTGTGTAAAGAAACAGTATCAACCAATCTCCAACAGAAGATTCCCTCCCCCAGGGCCTGGTGCAGGCCTGGGAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR TCA 90 bp | GTAGAAAAGAAAGCACAAGGCTGTGTGTACTCCTGGCACTCCTTGTaGGCTAGCCCAGGGTACCAGTGCAGTAACCTCTCTTGCCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: VEKKAQGCVYSWHSL*ASPGYQCSNLSCLL Trigger: TAGAAGGCAAGAGAGGTTACTGCACTGGTACCCTGGGCTAGCTCACAAGGAGTGCCAGGAGTACACACAGCCTTGTGCTTTCTTTTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR TCA 90 bp | AACCAAGAAGAAGCAACCCCTGCTCTGTTCTGTCTTGCTGCTGTGTaGGACTGTCTAGCCTCAAATACAGCAACTAGCCATAGCCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: NQEEATPALFCLAAV*DCLASNTATSHSLQ Trigger: CTGGAGGCTATGGCTAGTTGCTGTATTTGAGGCTAGACAGTCTCACACAGCAGCAAGACAGAACAGAGCAGGGGTTGCTTCTTCTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR TCA 90 bp | TTGCCTGCTTGGGAGCCTTGCTCACTTTTAAGTGGTCTTGTACAGTaGGGTAATCTATGGTGTGTCAGTTTGGGCTCCAAAAGTGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LPAWEPCSLLSGLVQ*GNLWCVSLGSKSGW Trigger: CCACCCACTTTTGGAGCCCAAACTGACACACCATAGATTACCTCACTGTACAAGACCACTTAAAAGTGAGCAAGGCTCCCAAGCAGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR CCA 90 bp | CAGGCCTGCACCAGGCCCTGGGGGAGGGAATCTTCTGTTGGAGATTaGTTGATACTGTTTCTTTACACAACAGTAACAGAGCAGAAGTTA | + |
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Preference number: 1 (lower is better) Translates to: QACTRPWGRESSVGD*LILFLYTTVTEQKL Trigger: TAACTTCTGCTCTGTTACTGTTGTGTAAAGAAACAGTATCAACCAATCTCCAACAGAAGATTCCCTCCCCCAGGGCCTGGTGCAGGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR CCA 90 bp | TTGAAGTCTGTTTTCAGTGCTATCAGGATCACGGAAATATCAGCCTaGCACAAACCTGTGATCTCAGTACCTGGTAGGCTAGGAAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LKSVFSAIRITEISA*HKPVISVPGRLGKG Trigger: CCCCTTTCCTAGCCTACCAGGTACTGAGATCACAGGTTTGTGCCAGGCTGATATTTCCGTGATCCTGATAGCACTGAAAACAGACTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR CCA 90 bp | AGACAGCATCTGAGACCCACAGCTGACTGGAGGACTCCACGGACCTaGTATTTCCGTAGTTTTACTTCATCTCCTATGTTAAGTTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: RQHLRPTADWRTPRT*YFRSFTSSPMLSSA Trigger: TGCAGAACTTAACATAGGAGATGAAGTAAAACTACGGAAATACCAGGTCCGTGGAGTCCTCCAGTCAGCTGTGGGTCTCAGATGCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR GCA 90 bp | CACCTTTGTACTTTGTCAACTTTGAAGACTGCTACCAGCCTTCCTTaGATGCTTCAGTTAGCCAAATGCTCAGGCAGGAAAGCACTTTTC | + |
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Preference number: 1 (lower is better) Translates to: HLCTLSTLKTATSLP*MLQLAKCSGRKALF Trigger: GAAAAGTGCTTTCCTGCCTGAGCATTTGGCTAACTGAAGCATGCAAGGAAGGCTGGTAGCAGTCTTCAAAGTTGACAAAGTACAAAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR GCA 90 bp | AACGCAACACAAACACAGCATCAGCATCTTGAAGTCTGTTTTCAGTaGTATCAGGATCACGGAAATATCAGCCTGGCACAAACCTGTGAT | + |
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Preference number: 1 (lower is better) Translates to: NATQTQHQHLEVCFQ*YQDHGNISLAQTCD Trigger: ATCACAGGTTTGTGCCAGGCTGATATTTCCGTGATCCTGATAGCACTGAAAACAGACTTCAAGATGCTGATGCTGTGTTTGTGTTGCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR TCA 90 bp | GGTAGAGTGACCAACAAGTATCTTGGATGTAGGAAAAAGATATGGTaGAGAGAGGAATTTCTATTTCCCAGTGACCACAGGATGCCTCTA | + |
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Preference number: 1 (lower is better) Translates to: GRVTNKYLGCRKKIW*REEFLFPSDHRMPL Trigger: TAGAGGCATCCTGTGGTCACTGGGAAATAGAAATTCCTCTCTTCACCATATCTTTTTCCTACATCCAAGATACTTGTTGGTCACTCTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR CCA 90 bp | AAGTTTATAATACTAGAGTTCTTTGCTGTTGTTTTGTGTTTGAGATaGATCCCACAGTGTGGACCAGGGTGGGCAGGAACTCTTTATCCT | + |
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Preference number: 1 (lower is better) Translates to: KFIILEFFAVVLCLR*IPQCGPGWAGTLYP Trigger: AGGATAAAGAGTTCCTGCCCACCCTGGTCCACACTGTGGGATCCATCTCAAACACAAAACAACAGCAAAGAACTCTAGTATTATAAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR TCA 90 bp | CCTGAGGCTAATTCAGCTCTGTGTCAATATACAATCACTTCACACTaGAACACTGCATTTTGGAACCGCATTACTTTGAACTATACTAAT | + |
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Preference number: 1 (lower is better) Translates to: PEANSALCQYTITSH*NTAFWNRITLNYTN Trigger: ATTAGTATAGTTCAAAGTAATGCGGTTCCAAAATGCAGTGTTTCAGTGTGAAGTGATTGTATATTGACACAGAGCTGAATTAGCCTCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR CCA 90 bp | GAAGCAAATAGAGTTGGGTATTTTTGTCAGAATCCTACCTCTATGTaGTATGTAGACACAAATGCACAGCTGAAGACAAAAACTGACTTT | + |
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Preference number: 1 (lower is better) Translates to: EANRVGYFCQNPTSM*YVDTNAQLKTKTDF Trigger: AAAGTCAGTTTTTGTCTTCAGCTGTGCATTTGTGTCTACATACCACATAGAGGTAGGATTCTGACAAAAATACCCAACTCTATTTGCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR GCA 90 bp | TGGCATTTAGCTATTAAAGTGTGTGTGTGTTTGGGTGTGTGTATATaGACAGTACTTCAGAGAAGTACAAAGCAGCACTTTTTAAAAATA | + |
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Preference number: 1 (lower is better) Translates to: WHLAIKVCVCLGVCI*TVLQRSTKQHFLKI Trigger: TATTTTTAAAAAGTGCTGCTTTGTACTTCTCTGAAGTACTGTGCATATACACACACCCAAACACACACACACTTTAATAGCTAAATGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR CAA 90 bp | GGTAATCTATGGTGTGTCAGTTTGGGCTCCAAAAGTGGGTGGTCTTaGCAGAGGGAGGTGCTCCCTCACTCTGCCTCTGGCTGGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: GNLWCVSLGSKSGWS*QREVLPHSASGWSQ Trigger: CTGGCTCCAGCCAGAGGCAGAGTGAGGGAGCACCTCCCTCTGCAAAGACCACCCACTTTTGGAGCCCAAACTGACACACCATAGATTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR GCA 90 bp | GAATCATCTCTTGCCTGCTTGGGAGCCTTGCTCACTTTTAAGTGGTCTTGTACACTGGTCTCCCAGGCCTaGACCAGGCCCTGGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: ESSLACLGALLTFKWSCTLVSQA*TRPWGR Trigger: CCTCCCCCAGGGCCTGGTGCAGGCCTGGGAGACCAG...TGTACAAGACCACTTAAAAGTGAGCAAGGCTCCCAAGCAGGCAAGAGATGATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGCCAAAGTGGGTGGTCTTTaGAGAGGGAGGTGCTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: LRNPPVSASRVLGLKVCAKVGGL*RGRCSL Trigger: GAGGGAGCACCTCCCTCTGCAAAGACCACCCACTTT...GGCACACACCTTTAATCCCAGCACTCGGGAGGCAGAGACAGGCGGATTTCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR CCA 90 bp | TTTGAACTCAAATCCTCATGCCTTAACCTTTCCAATGTGGGTATGACAGGGGCGGGAAGGAGCTGGGGGTaGGCACAGACGGGGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: FELKSSCLNLSNVGMTGAGRSWG*AQTGTS Trigger: GGAAGTCCCCGTCTGTGCCCACCCCCAGCTCCTTCC...CGCCCCTGTCATACCCACATTGGAAAGGTTAAGGCATGAGGATTTGAGTTCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR CCA 90 bp | TGCCCACTTAAAACAGCTAGAAAGATGCCCCTACAACATACTAGAAGGTTTGTCGGTGGGGGAAGGAGCTaGGGGTGGGCACAGACGGGG | + |
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Preference number: 2 (lower is better) Translates to: CPLKTARKMPLQHTRRFVGGGRS*GWAQTG Trigger: CCCCGTCTGTGCCCACCCCCAGCTCCTTCCCCCACC...GACAAACCTTCTAGTATGTTGTAGGGGCATCTTTCTAGCTGTTTTAAGTGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR CAA 90 bp | CCAGGTCTAGGTGGAAATTCTAGATCCCCAAGAGGGCAGCAGTGCTaGAGAATAGAGCTCAGTACCAGAGCGTTACGGATCACCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PGLGGNSRSPRGQQC*RIELSTRALRITSQ Trigger: CTGGCTGGTGATCCGTAACGCTCTGGTACTGAGCTCTATTCTCAAGCACTGCTGCCCTCTTGGGGATCTAGAATTTCCACCTAGACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGCCTGCTCTGTTCTGTCTTaGTGCTGTGTGAGACTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LRNPPVSASRVLGLKVCACSVLS*CCVRLS Trigger: AGACAGTCTCACACAGCAGCAAGACAGAACAGAGCA...GGCACACACCTTTAATCCCAGCACTCGGGAGGCAGAGACAGGCGGATTTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGCCTGCAGTAACCTCTCTTaGCTTCTAGTTCTGCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: LRNPPVSASRVLGLKVCACSNLS*LLVLPS Trigger: GCTAGGCAGAACTAGAAGGCAAGAGAGGTTACTGCA...GGCACACACCTTTAATCCCAGCACTCGGGAGGCAGAGACAGGCGGATTTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGCCGTCTGTGTAAATATGTaGCCCACAGCAGTCCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: LRNPPVSASRVLGLKVCAVCVNM*PTAVLW Trigger: CCAAAGGACTGCTGTGGGGCACATATTTACACAGAC...GGCACACACCTTTAATCCCAGCACTCGGGAGGCAGAGACAGGCGGATTTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGCCAAAGGGCATCAACACTaGAGGGAAACTCTGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: LRNPPVSASRVLGLKVCAKGHQH*RETLSA Trigger: TGCAGACAGAGTTTCCCTCCAGTGTTGATGCCCTTT...GGCACACACCTTTAATCCCAGCACTCGGGAGGCAGAGACAGGCGGATTTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR CAA 90 bp | CCAGGCCTCTGTAAGCTTGGGACTCAAGGGGCTGAGAATCATCTCTaGCCTGCTTGGGAGCCTTGCTCACTTTTAAGTGGTCTTGTACAG | + |
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Preference number: 2 (lower is better) Translates to: PGLCKLGTQGAENHL*PAWEPCSLLSGLVQ Trigger: CTGTACAAGACCACTTAAAAGTGAGCAAGGCTCCCAAGCAGGCAAGAGATGATTCTCAGCCCCTTGAGTCCCAAGCTTACAGAGGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR CAA 90 bp | CCAGGCCTGCACCAGGCCCTGGGGGAGGGAATCTTCTGTTGGAGATaGGTTGATACTGTTTCTTTACACAACAGTAACAGAGCAGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: PGLHQALGEGIFCWR*VDTVSLHNSNRAEV Trigger: AACTTCTGCTCTGTTACTGTTGTGTAAAGAAACAGTATCAACCAATCTCCAACAGAAGATTCCCTCCCCCAGGGCCTGGTGCAGGCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGCCTTCACACTGAAACACTaGATTTTGGAACCGCATTAC | + |
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Preference number: 2 (lower is better) Translates to: LRNPPVSASRVLGLKVCAFTLKH*ILEPHY Trigger: GTAATGCGGTTCCAAAATGCAGTGTTTCAGTGTGAA...GGCACACACCTTTAATCCCAGCACTCGGGAGGCAGAGACAGGCGGATTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR CCA 90 bp | TGCCCACTTAAAACAGCTAGAAAGATGCCCCTACAACATACTAGAAGGTTTGTCGTTAAGTTCCTGTGGTaGGGGAAGGAGCTGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: CPLKTARKMPLQHTRRFVVKFLW*GKELGV Trigger: CACCCCCAGCTCCTTCCCCCACCACAGGAACTTAAC...GACAAACCTTCTAGTATGTTGTAGGGGCATCTTTCTAGCTGTTTTAAGTGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR CCA 90 bp | GAATCATCTCTTGCCTGCTTGGGAGCCTTGCTCACTTTTAAGTGGTCTTGTACAGGTTTCAGGCCACCCTaGACTACATGGAGCCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: ESSLACLGALLTFKWSCTGFRPP*TTWSLF Trigger: AAACAGGCTCCATGTAGTCCAGGGTGGCCTGAAACC...TGTACAAGACCACTTAAAAGTGAGCAAGGCTCCCAAGCAGGCAAGAGATGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGCCAAATCGAGTCTTAAATaGAGGGAATGGTCCTATCAA | + |
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Preference number: 2 (lower is better) Translates to: LRNPPVSASRVLGLKVCAKSSLK*REWSYQ Trigger: TTGATAGGACCATTCCCTCCATTTAAGACTCGATTT...GGCACACACCTTTAATCCCAGCACTCGGGAGGCAGAGACAGGCGGATTTCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR CAA 90 bp | GCCTGCACCAGGCCCTGGGGGAGGGAATCTTCTGTTGGAGATTGGTaGATACTGTTTCTTTACACAACAGTAACAGAGCAGAAGTTAGAT | + |
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Preference number: 2 (lower is better) Translates to: ACTRPWGRESSVGDW*ILFLYTTVTEQKLD Trigger: ATCTAACTTCTGCTCTGTTACTGTTGTGTAAAGAAACAGTATCAACCAATCTCCAACAGAAGATTCCCTCCCCCAGGGCCTGGTGCAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR TCA 90 bp | TGCCCACTTAAAACAGCTAGAAAGATGCCCCTACAACATACTAGAAGGTTTGTCAAGGATCCGGAACTGTaGGGTTCCTGGGAAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: CPLKTARKMPLQHTRRFVKDPEL*GSWEGQ Trigger: CTGACCTTCCCAGGAACCTCACAGTTCCGGATCCTT...GACAAACCTTCTAGTATGTTGTAGGGGCATCTTTCTAGCTGTTTTAAGTGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR TCA 90 bp | GAATCATCTCTTGCCTGCTTGGGAGCCTTGCTCACTTTTAAGTGGTCTTGTACACCTTCTTCTTCCTGCTaGGCTATGGCATTAGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: ESSLACLGALLTFKWSCTPSSSC*AMALAH Trigger: GTGAGCTAATGCCATAGCTCAGCAGGAAGAAGAAGG...TGTACAAGACCACTTAAAAGTGAGCAAGGCTCCCAAGCAGGCAAGAGATGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR GCA 90 bp | TGCCCACTTAAAACAGCTAGAAAGATGCCCCTACAACATACTAGAAGGTTTGTCGCACAGCTTCCTCACTaGCCTGTCCACTGGAACTCA | + |
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Preference number: 2 (lower is better) Translates to: CPLKTARKMPLQHTRRFVAQLPH*PVHWNS Trigger: TGAGTTCCAGTGGACAGGGCAGTGAGGAAGCTGTGC...GACAAACCTTCTAGTATGTTGTAGGGGCATCTTTCTAGCTGTTTTAAGTGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGCCTCTGTGTATCTCAGATaGCTACATTCTAAAAGATCA | + |
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Preference number: 2 (lower is better) Translates to: LRNPPVSASRVLGLKVCASVYLR*LHSKRS Trigger: TGATCTTTTAGAATGTAGGCATCTGAGATACACAGA...GGCACACACCTTTAATCCCAGCACTCGGGAGGCAGAGACAGGCGGATTTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR GCA 90 bp | ACACACCACTGGCTTCCACCAACTAAAAGGCTAAGAATGTCAACAGACAGCATCTTCTCAGTGGCCTCCTaGTACTCTCTCAAAGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: THHWLPPTKRLRMSTDSIFSVAS*YSLKGH Trigger: ATGCCCTTTGAGAGAGTAGCAGGAGGCCACTGAGAA...GATGCTGTCTGTTGACATTCTTAGCCTTTTAGTTGGTGGAAGCCAGTGGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR TCA 90 bp | GAATCATCTCTTGCCTGCTTGGGAGCCTTGCTCACTTTTAAGTGGTCTTGTACATGTCTTGCTGCTGTGTaGGACTGTCTAGCCTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: ESSLACLGALLTFKWSCTCLAAV*DCLASN Trigger: ATTTGAGGCTAGACAGTCTCACACAGCAGCAAGACA...TGTACAAGACCACTTAAAAGTGAGCAAGGCTCCCAAGCAGGCAAGAGATGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
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| 3UTR-3UTR GCA 90 bp | ACACACCACTGGCTTCCACCAACTAAAAGGCTAAGAATGTCAACAGACAGCATCTCTGTTCTGTCTTGCTaGTGTGTGAGACTGTCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: THHWLPPTKRLRMSTDSISVLSC*CVRLSS Trigger: GCTAGACAGTCTCACACAGCAGCAAGACAGAACAGA...GATGCTGTCTGTTGACATTCTTAGCCTTTTAGTTGGTGGAAGCCAGTGGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGTGGAAATTCTAGATCCCCAAGAGGGCAGCAGTGCTTGAGAATAGAGCTCTGTGTGTATGAAGTATaGGAGTGCACATTTCTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LGGNSRSPRGQQCLRIELCVYEV*ECTFLR Trigger: CCTTAGAAATGTGCACTCCCATACTTCATACACACA...GAGCTCTATTCTCAAGCACTGCTGCCCTCTTGGGGATCTAGAATTTCCACCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CCA 90 bp | ACACACCACTGGCTTCCACCAACTAAAAGGCTAAGAATGTCAACAGACAGCATCACGGAAATATCAGCCTaGCACAAACCTGTGATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: THHWLPPTKRLRMSTDSITEISA*HKPVIS Trigger: TGAGATCACAGGTTTGTGCCAGGCTGATATTTCCGT...GATGCTGTCTGTTGACATTCTTAGCCTTTTAGTTGGTGGAAGCCAGTGGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTGGCCATCTCTCACACCCTTTTAACAGGTACAACCTTTCGTGTGTATTAACACTTTTACACCAGGTGTaGCAGTACACCTCCACAACC | + |
|
Preference number: 2 (lower is better) Translates to: SGHLSHPFNRYNLSCVLTLLHQV*QYTSTT Trigger: GGTTGTGGAGGTGTACTGCCACACCTGGTGTAAAAG...TGTTAATACACACGAAAGGTTGTACCTGTTAAAAGGGTGTGAGAGATGGCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 90 bp | TCACCTTTGTACTTTGTCAACTTTGAAGACTGCTACCAGCCTTCCTaGCATGCTTCAGTTAGCCAAATGCTCAGGCAGGAAAGCACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SPLYFVNFEDCYQPS*HASVSQMLRQESTF Trigger: AAAAGTGCTTTCCTGCCTGAGCATTTGGCTAACTGAAGCATGCAAGGAAGGCTGGTAGCAGTCTTCAAAGTTGACAAAGTACAAAGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CCA 90 bp | ACACACCACTGGCTTCCACCAACTAAAAGGCTAAGAATGTCAACAGACAGCATCTCCAAACAACTGTTGTaGCCAATTCTAAAGGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: THHWLPPTKRLRMSTDSISKQLL*PILKGS Trigger: GCTTCCCTTTAGAATTGGCCACAACAGTTGTTTGGA...GATGCTGTCTGTTGACATTCTTAGCCTTTTAGTTGGTGGAAGCCAGTGGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCACTTAAAACAGCTAGAAAGATGCCCCTACAACATACTAGAAGGTTTGTCTTGCTGGCATGGTCATaGCTAACGCCTATAATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: CPLKTARKMPLQHTRRFVLLAWS*LTPIIL Trigger: GAGGATTATAGGCGTTAGCCATGACCATGCCAGCAA...GACAAACCTTCTAGTATGTTGTAGGGGCATCTTTCTAGCTGTTTTAAGTGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 90 bp | AGCCTGTTTCAAAACAGAACGCAACACAAACACAGCATCAGCATCTaGAAGTCTGTTTTCAGTGCTATCAGGATCACGGAAATATCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SLFQNRTQHKHSISI*KSVFSAIRITEISA Trigger: GGCTGATATTTCCGTGATCCTGATAGCACTGAAAACAGACTTCAAGATGCTGATGCTGTGTTTGTGTTGCGTTCTGTTTTGAAACAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR GCA 90 bp | TTTGAACTCAAATCCTCATGCCTTAACCTTTCCAATGTGGGTATGACAGGGGCGTTGGGTGTGTGTATATaGACAGTACTTCAGAGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: FELKSSCLNLSNVGMTGALGVCI*TVLQRS Trigger: ACTTCTCTGAAGTACTGTGCATATACACACACCCAA...CGCCCCTGTCATACCCACATTGGAAAGGTTAAGGCATGAGGATTTGAGTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR GCA 90 bp | ACACACCACTGGCTTCCACCAACTAAAAGGCTAAGAATGTCAACAGACAGCATCGAGGGAAACTCTGTCTaGAGCAGTGTAATTTCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: THHWLPPTKRLRMSTDSIEGNSV*SSVISN Trigger: ATTTGAAATTACACTGCTGCAGACAGAGTTTCCCTC...GATGCTGTCTGTTGACATTCTTAGCCTTTTAGTTGGTGGAAGCCAGTGGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCACTTAAAACAGCTAGAAAGATGCCCCTACAACATACTAGAAGGTTTGTCCAAGCAAGGCACCATTaGAAAGACAACACACTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: CPLKTARKMPLQHTRRFVQARHH*KDNTLG Trigger: TCCAAGTGTGTTGTCTTTCCAATGGTGCCTTGCTTG...GACAAACCTTCTAGTATGTTGTAGGGGCATCTTTCTAGCTGTTTTAAGTGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGTGGAAATTCTAGATCCCCAAGAGGGCAGCAGTGCTTGAGAATAGAGCTCAAACATTGGGATTTCTaGCCAGCAATCCATTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: LGGNSRSPRGQQCLRIELKHWDF*PAIHFI Trigger: AATAAAATGGATTGCTGGCCAGAAATCCCAATGTTT...GAGCTCTATTCTCAAGCACTGCTGCCCTCTTGGGGATCTAGAATTTCCACCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCACTTAAAACAGCTAGAAAGATGCCCCTACAACATACTAGAAGGTTTGTCGCTCCAAAACCTATGTaGCTAGCCTGTGTGTACAAA | + |
|
Preference number: 2 (lower is better) Translates to: CPLKTARKMPLQHTRRFVAPKPM*LACVYK Trigger: TTTGTACACACAGGCTAGCCACATAGGTTTTGGAGC...GACAAACCTTCTAGTATGTTGTAGGGGCATCTTTCTAGCTGTTTTAAGTGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR TCA 90 bp | ACACACCACTGGCTTCCACCAACTAAAAGGCTAAGAATGTCAACAGACAGCATCGGAACCGCATTACTTTaGACTATACTAATTATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: THHWLPPTKRLRMSTDSIGTALL*TILIMV Trigger: CACCATAATTAGTATAGTTCAAAGTAATGCGGTTCC...GATGCTGTCTGTTGACATTCTTAGCCTTTTAGTTGGTGGAAGCCAGTGGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR TCA 90 bp | ACACACCACTGGCTTCCACCAACTAAAAGGCTAAGAATGTCAACAGACAGCATCCTGTTGGAGATTGGTTaGTACTGTTTCTTTACACAA | + |
|
Preference number: 2 (lower is better) Translates to: THHWLPPTKRLRMSTDSILLEIG*YCFFTQ Trigger: TTGTGTAAAGAAACAGTATCAACCAATCTCCAACAG...GATGCTGTCTGTTGACATTCTTAGCCTTTTAGTTGGTGGAAGCCAGTGGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTGGCCATCTCTCACACCCTTTTAACAGGTACAACCTTTCGTGTGTATTAACAAGCAAATCTGTACAGTaGAATATCAGGCATGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SGHLSHPFNRYNLSCVLTSKSVQ*NIRHAA Trigger: AGCTGCATGCCTGATATTCCACTGTACAGATTTGCT...TGTTAATACACACGAAAGGTTGTACCTGTTAAAAGGGTGTGAGAGATGGCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 90 bp | CAATTGGCTACATTAAATCTATCGTGTGCTTTTGGCTCAGCAACATaGTATCTCAGCGCTTTGCAAACTGAAATTACAACACCCTGCATG | + |
|
Preference number: 2 (lower is better) Translates to: QLATLNLSCAFGSAT*YLSALQTEITTPCM Trigger: CATGCAGGGTGTTGTAATTTCAGTTTGCAAAGCGCTGAGATACAATGTTGCTGAGCCAAAAGCACACGATAGATTTAATGTAGCCAATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR TCA 90 bp | CAACACAAACACAGCATCAGCATCTTGAAGTCTGTTTTCAGTGCTATCAGGATCGCCCAAAAGACCATGTaGGAAAATTTACAGTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: QHKHSISILKSVFSAIRIAQKTM*ENLQFP Trigger: TGGAAACTGTAAATTTTCTCACATGGTCTTTTGGGC...GATCCTGATAGCACTGAAAACAGACTTCAAGATGCTGATGCTGTGTTTGTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR TCA 90 bp | AGTGGCCATCTCTCACACCCTTTTAACAGGTACAACCTTTCGTGTGTATTAACAACAATCACTTCACACTaGAACACTGCATTTTGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: SGHLSHPFNRYNLSCVLTTITSH*NTAFWN Trigger: GTTCCAAAATGCAGTGTTTCAGTGTGAAGTGATTGT...TGTTAATACACACGAAAGGTTGTACCTGTTAAAAGGGTGTGAGAGATGGCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR TCA 90 bp | CAACACAAACACAGCATCAGCATCTTGAAGTCTGTTTTCAGTGCTATCAGGATCTCACAGGGTAAACTGTaGAGTCAAATACCATGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: QHKHSISILKSVFSAIRISQGKL*SQIPWK Trigger: TTTCCATGGTATTTGACTTCACAGTTTACCCTGTGA...GATCCTGATAGCACTGAAAACAGACTTCAAGATGCTGATGCTGTGTTTGTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR TCA 90 bp | AGTGGCCATCTCTCACACCCTTTTAACAGGTACAACCTTTCGTGTGTATTAACACACGTTTTACTAAACTaGGAACCAAGAAGAAGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: SGHLSHPFNRYNLSCVLTHVLLN*EPRRSN Trigger: GTTGCTTCTTCTTGGTTCTCAGTTTAGTAAAACGTG...TGTTAATACACACGAAAGGTTGTACCTGTTAAAAGGGTGTGAGAGATGGCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CCA 90 bp | ACACACCACTGGCTTCCACCAACTAAAAGGCTAAGAATGTCAACAGACAGCATCCTTATAAATAAACATTaGGATTTCTGGCCAGCAATC | + |
|
Preference number: 2 (lower is better) Translates to: THHWLPPTKRLRMSTDSILINKH*DFWPAI Trigger: GATTGCTGGCCAGAAATCCCAATGTTTATTTATAAG...GATGCTGTCTGTTGACATTCTTAGCCTTTTAGTTGGTGGAAGCCAGTGGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CCA 90 bp | TTTGAACTCAAATCCTCATGCCTTAACCTTTCCAATGTGGGTATGACAGGGGCGACTGCTACTGGACTCTaGAATAACTATTTTAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: FELKSSCLNLSNVGMTGATATGL*NNYFNP Trigger: TGGATTAAAATAGTTATTCCAGAGTCCAGTAGCAGT...CGCCCCTGTCATACCCACATTGGAAAGGTTAAGGCATGAGGATTTGAGTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CCA 90 bp | ACACACCACTGGCTTCCACCAACTAAAAGGCTAAGAATGTCAACAGACAGCATCTCTTCTGTTGGAGATTaGTTGATACTGTTTCTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: THHWLPPTKRLRMSTDSISSVGD*LILFLY Trigger: GTAAAGAAACAGTATCAACCAATCTCCAACAGAAGA...GATGCTGTCTGTTGACATTCTTAGCCTTTTAGTTGGTGGAAGCCAGTGGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR GCA 90 bp | ATTACTTTGAACTATACTAATTATGGTGGTAGGACACACCTACCCTGGATAGACACCATTAAAATCCTTTaGACACTTAGTGCTTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: ITLNYTNYGGRTHLPWIDTIKIL*TLSASQ Trigger: CTGTGAAGCACTAAGTGTGCAAAGGATTTTAATGGT...GTCTATCCAGGGTAGGTGTGTCCTACCACCATAATTAGTATAGTTCAAAGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | CTCACTCTGCCTCTGGCTGGAGCCAGTTCCTGCAGCTaGCCTGAAGGCAGCCTACAGACTGCACTCACGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LTLPLAGASSCS*PEGSLQTALTH Trigger: ATGCGTGAGTGCAGTCTGTAGGCTGCCTTCAGGCCAGCTGCAGGAACTGGCTCCAGCCAGAGGCAGAGTGAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | GGTGTGTCAGTTTGGGCTCCAAAAGTGGGTGGTCTTTaGAGAGGGAGGTGCTCCCTCACTCTGCCTCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GVSVWAPKVGGL*RGRCSLTLPLA Trigger: AGCCAGAGGCAGAGTGAGGGAGCACCTCCCTCTGCAAAGACCACCCACTTTTGGAGCCCAAACTGACACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | TCCAGAGTGCTGGTCTCCCAGGCCTGCACCAGGCCCTaGGGGAGGGAATCTTCTGTTGGAGATTGGTTGATA | + |
|
Preference number: 3 (lower is better) Translates to: SRVLVSQACTRP*GRESSVGDWLI Trigger: TATCAACCAATCTCCAACAGAAGATTCCCTCCCCCAGGGCCTGGTGCAGGCCTGGGAGACCAGCACTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGCCCTTGAGTGCCCTTCTTaGGGTCCCTTTCAACTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LRNPPVSASRVLGLKVCALECPS*GPFQLP Trigger: GGGCAGTTGAAAGGGACCCAAAGAAGGGCACTCAAG...GGCACACACCTTTAATCCCAGCACTCGGGAGGCAGAGACAGGCGGATTTCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGCCAAAAGTGGGTGGTCTTaGCAGAGGGAGGTGCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRNPPVSASRVLGLKVCAKSGWS*QREVLP Trigger: AGGGAGCACCTCCCTCTGCAAAGACCACCCACTTTT...GGCACACACCTTTAATCCCAGCACTCGGGAGGCAGAGACAGGCGGATTTCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | GCACTTGGGAGGCAGAGGCAGAGGCAGGTGGATTTCTaGGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ALGRQRQRQVDF*VRGQPGLQSEF Trigger: GAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCTGCCTCCCAAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | ATGTGCCCCACAGCAGTCCTTTGGGCTTTTATGTACTaGGGCTCAGCCTGGAGTCACCTGCTCACGGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: MCPTAVLWAFMY*GSAWSHLLTEL Trigger: GAGCTCCGTGAGCAGGTGACTCCAGGCTGAGCCTCAGTACATAAAAGCCCAAAGGACTGCTGTGGGGCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | CCTGCCTATGTCCCCACTGAGCATCTTACACGTGACTaGAGTGGGAGCTCCAAAACCTATGTGGCTAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PAYVPTEHLTRD*SGSSKTYVASL Trigger: CAGGCTAGCCACATAGGTTTTGGAGCTCCCACTGCAGTCACGTGTAAGATGCTCAGTGGGGACATAGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | GCCCAAGCCCGGGCTAGCTTTGAACTCAAATCCTCATaGCTTAACCTTTCCAATGTGGGTATGACAGGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: AQARASFELKSS*LNLSNVGMTGA Trigger: CGCCCCTGTCATACCCACATTGGAAAGGTTAAGGCATGAGGATTTGAGTTCAAAGCTAGCCCGGGCTTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | CTCAGCCTGGAGTCACCTGCTCACGGAGCTCCTGAGTaGTGTAGTAATGAAAGGGTTTTGGTAGCTGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LSLESPAHGAPE*CSNERVLVAGM Trigger: CATCCCAGCTACCAAAACCCTTTCATTACTACAGCACTCAGGAGCTCCGTGAGCAGGTGACTCCAGGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | GAGGACTTCATTAGCAACTTAAGGTCAAAGGGCACGTaGAGGAGGCCAGGCCTCTGTAAGCTTGGGACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: EDFISNLRSKGT*RRPGLCKLGTQ Trigger: TTGAGTCCCAAGCTTACAGAGGCCTGGCCTCCTCCACGTGCCCTTTGACCTTAAGTTGCTAATGAAGTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGCCCACAGCATCAGCATCTaGAAGTCTGTTTTCAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LRNPPVSASRVLGLKVCAHSISI*KSVFSA Trigger: AGCACTGAAAACAGACTTCAAGATGCTGATGCTGTG...GGCACACACCTTTAATCCCAGCACTCGGGAGGCAGAGACAGGCGGATTTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGCCATCTATCGTGTGCTTTaGGCTCAGCAACATTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: LRNPPVSASRVLGLKVCAIYRVL*AQQHCI Trigger: GATACAATGTTGCTGAGCCAAAAGCACACGATAGAT...GGCACACACCTTTAATCCCAGCACTCGGGAGGCAGAGACAGGCGGATTTCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | CCAACTAAAAGGCTAAGAATGTCAACAGACAGCATCTaGGACCCACAGCTGACTGGAGGACTCCACGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: PTKRLRMSTDSI*DPQLTGGLHGP Trigger: AGGTCCGTGGAGTCCTCCAGTCAGCTGTGGGTCTCAGATGCTGTCTGTTGACATTCTTAGCCTTTTAGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | GGCCTGCACCAGGCCCTGGGGGAGGGAATCTTCTGTTaGAGATTGGTTGATACTGTTTCTTTACACAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: GLHQALGEGIFC*RLVDTVSLHNS Trigger: ACTGTTGTGTAAAGAAACAGTATCAACCAATCTCCAACAGAAGATTCCCTCCCCCAGGGCCTGGTGCAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | TGCTGTTGTTTTGTGTTTGAGATGGATCCCACAGTGTaGACCAGGGTGGGCAGGAACTCTTTATCCTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CCCFVFEMDPTV*TRVGRNSLSSC Trigger: GCAGGAGGATAAAGAGTTCCTGCCCACCCTGGTCCACACTGTGGGATCCATCTCAAACACAAAACAACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | GGCGCAGGAGGGTGTCAGCCTAATTACAATTTCTCCTaGGCTCCCTATATCATTAGCCACTTAGTGGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: GAGGCQPNYNFS*APYIISHLVAI Trigger: GATGGCCACTAAGTGGCTAATGATATAGGGAGCCCAGGAGAAATTGTAATTAGGCTGACACCCTCCTGCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | GAAGCAACCCCTGCTCTGTTCTGTCTTGCTGCTGTGTaGGACTGTCTAGCCTCAAATACAGCAACTAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: EATPALFCLAAV*DCLASNTATSH Trigger: ATGGCTAGTTGCTGTATTTGAGGCTAGACAGTCTCACACAGCAGCAAGACAGAACAGAGCAGGGGTTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | TCCGGATCACGACTGGTGTGTGGTAACGCACACATGTaGACCCTAGTTTCTCTGTGTGTGTATGAAGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: SGSRLVCGNAHM*TLVSLCVYEVW Trigger: CCATACTTCATACACACACAGAGAAACTAGGGTGCACATGTGTGCGTTACCACACACCAGTCGTGATCCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | CCAAGAAGAAGCAACCCCTGCTCTGTTCTGTCTTGCTaGTGTGTGAGACTGTCTAGCCTCAAATACAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: PRRSNPCSVLSC*CVRLSSLKYSN Trigger: GTTGCTGTATTTGAGGCTAGACAGTCTCACACAGCAGCAAGACAGAACAGAGCAGGGGTTGCTTCTTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | GAACCAAGAAGAAGCAACCCCTGCTCTGTTCTGTCTTaGTGCTGTGTGAGACTGTCTAGCCTCAAATACAGC | + |
|
Preference number: 3 (lower is better) Translates to: EPRRSNPCSVLS*CCVRLSSLKYS Trigger: GCTGTATTTGAGGCTAGACAGTCTCACACAGCAGCAAGACAGAACAGAGCAGGGGTTGCTTCTTCTTGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | AGGTTCTCACTCTGGAGCTTTAGCTGGCCTAGACAATaGTCATTATGTAGACCTGGCCGGCTTCCAAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: RFSLWSFSWPRQ*SLCRPGRLPNQ Trigger: CTGATTTGGAAGCCGGCCAGGTCTACATAATGAGCATTGTCTAGGCCAGCTAAAGCTCCAGAGTGAGAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | GTCTTGTACAGTGAGGTAATCTATGGTGTGTCAGTTTaGGCTCCAAAAGTGGGTGGTCTTTGCAGAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VLYSEVIYGVSV*APKVGGLCRGR Trigger: CCTCCCTCTGCAAAGACCACCCACTTTTGGAGCCCAAACTGACACACCATAGATTACCTCACTGTACAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | AATGCTCAGGCAGGAAAGCACTTTTCTCAGGACAACTaGCTGCTCAGCAGGAGTTCTGAAAACTATCCGATG | + |
|
Preference number: 3 (lower is better) Translates to: NAQAGKHFSQDN*LLSRSSENYPM Trigger: CATCGGATAGTTTTCAGAACTCCTGCTGAGCAGGCAGTTGTCCTGAGAAAAGTGCTTTCCTGCCTGAGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | CTGAGACCCACAGCTGACTGGAGGACTCCACGGACCTaGTATTTCCGTAGTTTTACTTCATCTCCTATGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LRPTADWRTPRT*YFRSFTSSPML Trigger: TAACATAGGAGATGAAGTAAAACTACGGAAATACCAGGTCCGTGGAGTCCTCCAGTCAGCTGTGGGTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | GAGAACGGAGAGCATTTAGCAGAACACTGGCCCACATaGAAGACGCATTTGTCTGGAAGAATCCAGCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: ENGEHLAEHWPT*KTHLSGRIQHK Trigger: TTTGTGCTGGATTCTTCCAGACAAATGCGTCTTCCATGTGGGCCAGTGTTCTGCTAAATGCTCTCCGTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CAA 90 bp | ACACACCACTGGCTTCCACCAACTAAAAGGCTAAGAATGTCAACAGACAGCATCCCAAGCAAGGCACCATaGGAAAGACAACACACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: THHWLPPTKRLRMSTDSIPSKAP*ERQHTW Trigger: CCAAGTGTGTTGTCTTTCCAATGGTGCCTTGCTTGG...GATGCTGTCTGTTGACATTCTTAGCCTTTTAGTTGGTGGAAGCCAGTGGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCACTTAAAACAGCTAGAAAGATGCCCCTACAACATACTAGAAGGTTTGTCAGAGGGCAGCAGTGCTaGAGAATAGAGCTCAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: CPLKTARKMPLQHTRRFVRGQQC*RIELST Trigger: GGTACTGAGCTCTATTCTCAAGCACTGCTGCCCTCT...GACAAACCTTCTAGTATGTTGTAGGGGCATCTTTCTAGCTGTTTTAAGTGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | TCCTGGGAAGGTCAGCTCAGGGCCCAAAAGACCATGTaGGAAAATTTACAGTTTCCAAACAACTGTTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SWEGQLRAQKTM*ENLQFPNNCCG Trigger: GCCACAACAGTTGTTTGGAAACTGTAAATTTTCTCACATGGTCTTTTGGGCCCTGAGCTGACCTTCCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | TCCTGCCTAAGTCAGACTACTCAATGTCATCACACCTaGCAGTGGTTAACTCTTCTGTGGAGCCTCAACACT | + |
|
Preference number: 3 (lower is better) Translates to: SCLSQTTQCHHT*QWLTLLWSLNT Trigger: AGTGTTGAGGCTCCACAGAAGAGTTAACCACTGTCAGGTGTGATGACATTGAGTAGTCTGACTTAGGCAGGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | AGCTGCATAAAAGGTTTCAGGCCACCCTGGACTACATaGAGCCTGTTTCAAAACAGAACGCAACACAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: SCIKGFRPPWTT*SLFQNRTQHKH Trigger: GTGTTTGTGTTGCGTTCTGTTTTGAAACAGGCTCCATGTAGTCCAGGGTGGCCTGAAACCTTTTATGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | AAATGTCCTGCAATCAAGATGGGCATCTTGCTGGCATaGTCATGGCTAACGCCTATAATCCTCAGCTGCATA | + |
|
Preference number: 3 (lower is better) Translates to: KCPAIKMGILLA*SWLTPIILSCI Trigger: TATGCAGCTGAGGATTATAGGCGTTAGCCATGACCATGCCAGCAAGATGCCCATCTTGATTGCAGGACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | ACCAGGCCCTGGGGGAGGGAATCTTCTGTTGGAGATTaGTTGATACTGTTTCTTTACACAACAGTAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TRPWGRESSVGD*LILFLYTTVTE Trigger: CTCTGTTACTGTTGTGTAAAGAAACAGTATCAACCAATCTCCAACAGAAGATTCCCTCCCCCAGGGCCTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGTGGAAATTCTAGATCCCCAAGAGGGCAGCAGTGCTTGAGAATAGAGCTCCTGAAACACTGCATTTaGGAACCGCATTACTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LGGNSRSPRGQQCLRIELLKHCI*EPHYFE Trigger: TTCAAAGTAATGCGGTTCCAAAATGCAGTGTTTCAG...GAGCTCTATTCTCAAGCACTGCTGCCCTCTTGGGGATCTAGAATTTCCACCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | ACTTTGTCAACTTTGAAGACTGCTACCAGCCTTCCTTaGATGCTTCAGTTAGCCAAATGCTCAGGCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TLSTLKTATSLP*MLQLAKCSGRK Trigger: TTTCCTGCCTGAGCATTTGGCTAACTGAAGCATGCAAGGAAGGCTGGTAGCAGTCTTCAAAGTTGACAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | ATAATCCTCAGCTGCATAAAAGGTTTCAGGCCACCCTaGACTACATGGAGCCTGTTTCAAAACAGAACGCAA | + |
|
Preference number: 3 (lower is better) Translates to: IILSCIKGFRPP*TTWSLFQNRTQ Trigger: TTGCGTTCTGTTTTGAAACAGGCTCCATGTAGTCCAGGGTGGCCTGAAACCTTTTATGCAGCTGAGGATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR-3UTR CAA 90 bp | GAATCATCTCTTGCCTGCTTGGGAGCCTTGCTCACTTTTAAGTGGTCTTGTACATGTACTTTGTCAACTTaGAAGACTGCTACCAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ESSLACLGALLTFKWSCTCTLST*KTATSL Trigger: AAGGCTGGTAGCAGTCTTCAAAGTTGACAAAGTACA...TGTACAAGACCACTTAAAAGTGAGCAAGGCTCCCAAGCAGGCAAGAGATGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | ATAGACTGTGTGGTCATCGTGGACTTCTGCTCTTTCTaGAGCCTGAGGCTAATTCAGCTCTGTGTCAATATA | + |
|
Preference number: 3 (lower is better) Translates to: IDCVVIVDFCSF*SLRLIQLCVNI Trigger: TATATTGACACAGAGCTGAATTAGCCTCAGGCTTCAGAAAGAGCAGAAGTCCACGATGACCACACAGTCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | ACAATAAAAAGAAGTATTCTGTTCTCAGTGGCCTCCTaGTACTCTCTCAAAGGGCATCAACACTGGAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TIKRSILFSVAS*YSLKGHQHWRE Trigger: TTCCCTCCAGTGTTGATGCCCTTTGAGAGAGTAGCAGGAGGCCACTGAGAACAGAATACTTCTTTTTATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | GTGCTTTTGGCTCAGCAACATTGTATCTCAGCGCTTTaGAAACTGAAATTACAACACCCTGCATGCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: VLLAQQHCISAL*KLKLQHPACFT Trigger: TGTGAAGCATGCAGGGTGTTGTAATTTCAGTTTGCAAAGCGCTGAGATACAATGTTGCTGAGCCAAAAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | GCTGGTGTAGTGTCAATCAAAAGCAAATCTGTACAGTaGAATATCAGGCATGCAGCTAAACTTCACAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: AGVVSIKSKSVQ*NIRHAAKLHRV Trigger: TACCCTGTGAAGTTTAGCTGCATGCCTGATATTCCACTGTACAGATTTGCTTTTGATTGACACTACACCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | AAAACAGAACGCAACACAAACACAGCATCAGCATCTTaGAGTCTGTTTTCAGTGCTATCAGGATCACGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KTERNTNTASAS*SLFSVLSGSRK Trigger: TTTCCGTGATCCTGATAGCACTGAAAACAGACTTCAAGATGCTGATGCTGTGTTTGTGTTGCGTTCTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CCA 72 bp | CTTTCTGCAATGGAGTCTAAAATACTAACTATACTGTaGGCAGCGATGGCATTTTGCTGCAGTCTCTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSAMESKILTIL*AAMAFCCSLYL Trigger: CAAATAGAGACTGCAGCAAAATGCCATCGCTGCCCACAGTATAGTTAGTATTTTAGACTCCATTGCAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | CACACTGAAACACTGCATTTTGGAACCGCATTACTTTaGACTATACTAATTATGGTGGTAGGACACACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: HTETLHFGTALL*TILIMVVGHTY Trigger: GTAGGTGTGTCCTACCACCATAATTAGTATAGTTCAAAGTAATGCGGTTCCAAAATGCAGTGTTTCAGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | TTATTTTTGGCCAGTCTAACTACTACCTATGGTTCATaGCTTACTAAAGCCAGAGAACAGGAGCTAAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LFLASLTTTYGS*LTKAREQELRN Trigger: GTTCCTTAGCTCCTGTTCTCTGGCTTTAGTAAGTCATGAACCATAGGTAGTAGTTAGACTGGCCAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | ATGCTTTTGAAATTCACCTTTGTACTTTGTCAACTTTaGAGACTGCTACCAGCCTTCCTTGCATGCTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: MLLKFTFVLCQL*RLLPAFLACFS Trigger: ACTGAAGCATGCAAGGAAGGCTGGTAGCAGTCTTCAAAGTTGACAAAGTACAAAGGTGAATTTCAAAAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | GCTATTAAAGTGTGTGTGTGTTTGGGTGTGTGTATATaGACAGTACTTCAGAGAAGTACAAAGCAGCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: AIKVCVCLGVCI*TVLQRSTKQHF Trigger: AAAGTGCTGCTTTGTACTTCTCTGAAGTACTGTGCATATACACACACCCAAACACACACACACTTTAATAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR GCA 72 bp | CAAAAGTCCACAATTGGCTACATTAAATCTATCGTGTaGTTTTGGCTCAGCAACATTGTATCTCAGCGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QKSTIGYIKSIV*FWLSNIVSQRF Trigger: AAAGCGCTGAGATACAATGTTGCTGAGCCAAAAGCACACGATAGATTTAATGTAGCCAATTGTGGACTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | AAAGATATGGTGAAGAGAGGAATTTCTATTTCCCAGTaGCCACAGGATGCCTCTAATTATCTTGCCAGATTA | + |
|
Preference number: 3 (lower is better) Translates to: KDMVKRGISISQ*PQDASNYLARL Trigger: TAATCTGGCAAGATAATTAGAGGCATCCTGTGGTCACTGGGAAATAGAAATTCCTCTCTTCACCATATCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | AATTCAGCTCTGTGTCAATATACAATCACTTCACACTaGAACACTGCATTTTGGAACCGCATTACTTTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: NSALCQYTITSH*NTAFWNRITLN Trigger: GTTCAAAGTAATGCGGTTCCAAAATGCAGTGTTTCAGTGTGAAGTGATTGTATATTGACACAGAGCTGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR TCA 72 bp | GATGGGATACAAAGGAATATAAGAGTAAACCAAATGTaGTCAGTTAGAGTCTTTTTCCAAGGTGATGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: DGIQRNIRVNQM*SVRVFFQGDVS Trigger: ACTCACATCACCTTGGAAAAAGACTCTAACTGATCACATTTGGTTTACTCTTATATTCCTTTGTATCCCATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| CDS-3UTR TCA 90 bp | AGTGGCCATCTCTCACACCCTTTTAACAGGTACAACCTTTCGTGTGTATTAACACCAAATACGGTGACGTaGCCGGAGCCGCGGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: SGHLSHPFNRYNLSCVLTPNTVT*PEPRTT Trigger: GGTGGTCCGCGGCTCCGGTCACGTCACCGTATTTGG...TGTTAATACACACGAAAGGTTGTACCTGTTAAAAGGGTGTGAGAGATGGCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| CDS-3UTR TCA 90 bp | GAATCATCTCTTGCCTGCTTGGGAGCCTTGCTCACTTTTAAGTGGTCTTGTACATCAGTCCAAATACGGTaGCGTGACCGGAGCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ESSLACLGALLTFKWSCTSVQIR*RDRSRG Trigger: TCCGCGGCTCCGGTCACGTCACCGTATTTGGACTGA...TGTACAAGACCACTTAAAAGTGAGCAAGGCTCCCAAGCAGGCAAGAGATGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAACTCAAATCCTCATGCCTTAACCTTTCCAATGTGGGTATGACAGGGGCGTACTGCACCCTAACGTaGAGCAGCAGCACAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FELKSSCLNLSNVGMTGAYCTLT*SSSTGS Trigger: GCTGCCTGTGCTGCTGCTGCACGTTAGGGTGCAGTA...CGCCCCTGTCATACCCACATTGGAAAGGTTAAGGCATGAGGATTTGAGTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 72 bp | CCTCCTGTCAAGCCCACAGCTGTGTCACTCTACAGATaGACAGCTGTACACAGGGAACACTTGCATAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PPVKPTAVSLYR*TAVHREHLHRL Trigger: CAGTCTATGCAAGTGTTCCCTGTGTACAGCTGTCAATCTGTAGAGTGACACAGCTGTGGGCTTGACAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 72 bp | GGTGGAAATTCTAGATCCCCAAGAGGGCAGCAGTGCTaGAGAATAGAGCTCAGTACCAGAGCGTTACGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GGNSRSPRGQQC*RIELSTRALRI Trigger: GATCCGTAACGCTCTGGTACTGAGCTCTATTCTCAAGCACTGCTGCCCTCTTGGGGATCTAGAATTTCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 72 bp | TGTAAGCTTGGGACTCAAGGGGCTGAGAATCATCTCTaGCCTGCTTGGGAGCCTTGCTCACTTTTAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CKLGTQGAENHL*PAWEPCSLLSG Trigger: ACCACTTAAAAGTGAGCAAGGCTCCCAAGCAGGCAAGAGATGATTCTCAGCCCCTTGAGTCCCAAGCTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 72 bp | ACAAGTCTGTGTAAATATGTGCCCCACAGCAGTCCTTaGGGCTTTTATGTACTGAGGCTCAGCCTGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSLCKYVPHSSP*GFYVLRLSLES Trigger: TGACTCCAGGCTGAGCCTCAGTACATAAAAGCCCAAAGGACTGCTGTGGGGCACATATTTACACAGACTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| CDS-3UTR TCA 90 bp | AACTATTCAGAAACACATCCATTCTACAATTATGTTAGATCGGGCACGTTTTACGGTCGGGCGAGTACTTaGGCAGCTGCTCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NYSETHPFYNYVRSGTFYGRAST*AAAPPG Trigger: CCCTGGAGGAGCAGCTGCTCAAGTACTCGCCCGACC...GTAAAACGTGCCCGATCTAACATAATTGTAGAATGGATGTGTTTCTGAATAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAACTCAAATCCTCATGCCTTAACCTTTCCAATGTGGGTATGACAGGGGCGTTGCTCAGTCTCCAGTaGAAGCACAGCTTGTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FELKSSCLNLSNVGMTGALLSLQ*KHSLWY Trigger: ATACCACAAGCTGTGCTTGCACTGGAGACTGAGCAA...CGCCCCTGTCATACCCACATTGGAAAGGTTAAGGCATGAGGATTTGAGTTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 72 bp | AGGCCCTGGGGGAGGGAATCTTCTGTTGGAGATTGGTaGATACTGTTTCTTTACACAACAGTAACAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPWGRESSVGDW*ILFLYTTVTEQ Trigger: CTGCTCTGTTACTGTTGTGTAAAGAAACAGTATCAACCAATCTCCAACAGAAGATTCCCTCCCCCAGGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 72 bp | CACCAGGCCCTGGGGGAGGGAATCTTCTGTTGGAGATaGGTTGATACTGTTTCTTTACACAACAGTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HQALGEGIFCWR*VDTVSLHNSNR Trigger: TCTGTTACTGTTGTGTAAAGAAACAGTATCAACCAATCTCCAACAGAAGATTCCCTCCCCCAGGGCCTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 72 bp | TACTTTGTCAACTTTGAAGACTGCTACCAGCCTTCCTaGCATGCTTCAGTTAGCCAAATGCTCAGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YFVNFEDCYQPS*HASVSQMLRQE Trigger: TTCCTGCCTGAGCATTTGGCTAACTGAAGCATGCAAGGAAGGCTGGTAGCAGTCTTCAAAGTTGACAAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| CDS-3UTR CCA 90 bp | GAATCATCTCTTGCCTGCTTGGGAGCCTTGCTCACTTTTAAGTGGTCTTGTACATGCAAGCACAGCTTGTaGTATAACCTATTGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESSLACLGALLTFKWSCTCKHSL*YNLLFS Trigger: GGAAAACAATAGGTTATACCACAAGCTGTGCTTGCA...TGTACAAGACCACTTAAAAGTGAGCAAGGCTCCCAAGCAGGCAAGAGATGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 72 bp | GACCATGTGAGAAAATTTACAGTTTCCAAACAACTGTaGTGGCCAATTCTAAAGGGAAGCCCACAACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DHVRKFTVSKQL*WPILKGSPQQC Trigger: GCACTGTTGTGGGCTTCCCTTTAGAATTGGCCACAACAGTTGTTTGGAAACTGTAAATTTTCTCACATGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 72 bp | CAAAACAGAACGCAACACAAACACAGCATCAGCATCTaGAAGTCTGTTTTCAGTGCTATCAGGATCACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QNRTQHKHSISI*KSVFSAIRITE Trigger: TTCCGTGATCCTGATAGCACTGAAAACAGACTTCAAGATGCTGATGCTGTGTTTGTGTTGCGTTCTGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 72 bp | TTTATAATACTAGAGTTCTTTGCTGTTGTTTTGTGTTaGAGATGGATCCCACAGTGTGGACCAGGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FIILEFFAVVLC*RWIPQCGPGWA Trigger: TGCCCACCCTGGTCCACACTGTGGGATCCATCTCAAACACAAAACAACAGCAAAGAACTCTAGTATTATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| 3UTR CAA 72 bp | AGATCCTGGCATTTAGCTATTAAAGTGTGTGTGTGTTaGGGTGTGTGTATATGCACAGTACTTCAGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSWHLAIKVCVC*GVCICTVLQRS Trigger: ACTTCTCTGAAGTACTGTGCATATACACACACCCAAACACACACACACTTTAATAGCTAAATGCCAGGATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAACTCAAATCCTCATGCCTTAACCTTTCCAATGTGGGTATGACAGGGGCGGGGTCGGGCGAGTACTaGAGCAGCTGCTCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FELKSSCLNLSNVGMTGAGSGEY*SSCSSR Trigger: CCTGGAGGAGCAGCTGCTCAAGTACTCGCCCGACCC...CGCCCCTGTCATACCCACATTGGAAAGGTTAAGGCATGAGGATTTGAGTTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| CDS-3UTR CAA 90 bp | ACACACCACTGGCTTCCACCAACTAAAAGGCTAAGAATGTCAACAGACAGCATCCAGTGCAAGCACAGCTaGTGGTATAACCTATTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: THHWLPPTKRLRMSTDSIQCKHS*WYNLLF Trigger: AAACAATAGGTTATACCACAAGCTGTGCTTGCACTG...GATGCTGTCTGTTGACATTCTTAGCCTTTTAGTTGGTGGAAGCCAGTGGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||
| CDS-3UTR CAA 90 bp | ATTACTTTGAACTATACTAATTATGGTGGTAGGACACACCTACCCTGGATAGACTCTGATTCAAATTTGTaGCTCAGTCCAAATACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ITLNYTNYGGRTHLPWIDSDSNL*LSPNTV Trigger: CACCGTATTTGGACTGAGCAACAAATTTGAATCAGA...GTCTATCCAGGGTAGGTGTGTCCTACCACCATAATTAGTATAGTTCAAAGTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075452.7 |
||