Pregenerated sensors for CHGB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027350Ensembl transcript IDs: ENSMUST00000028826.4
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATCTGCTTTCTGCCTGTaGGTGAATCAATGGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: HVKHLFCRKNTLQVTLVTSAFCL*VNQWCP Trigger: AGGACACCATTGATTCACCCACAGGCAGAAAGCAGA...TGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| 3UTR CAA 90 bp | ACAACAGTAACACGGTCATTGTCACAGACACGTGAAACATCTATTTaGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGGCATTA | + |
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Preference number: 2 (lower is better) Translates to: TTVTRSLSQTRETSI*QEEYATSHASHMAL Trigger: TAATGCCATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACATCTATAAACAGTAAATTCTaGTTTCTGCCTGTGGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: VCVSTTVTRSLSQTRETSINSKF*FLPVGE Trigger: TTCACCCACAGGCAGAAAGCAGAATTTACTGTTTAT...AGATGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| 3UTR CAA 90 bp | GTAAATCTTTTTATTGTTTGTGTTTCAACAACAGTAACACGGTCATaGTCACAGACACGTGAAACATCTATTTTGCAGGAAGAATACGCT | + |
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Preference number: 2 (lower is better) Translates to: VNLFIVCVSTTVTRS*SQTRETSILQEEYA Trigger: AGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAACAATAAAAAGATTTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR GCA 90 bp | GTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACATCTAGCGGCCAGAGCCGCTaGGCCCAGGAGGCCGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VCVSTTVTRSLSQTRETSSGQSR*AQEAEE Trigger: CTCCTCGGCCTCCTGGGCGCAGCGGCTCTGGCCGCT...AGATGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR TCA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGGGCCCAGCGGGTTCCTaGGGCATCGGCTGGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RETSILQEEYATSHASHMGPAGS*GIGWVS Trigger: AGAGACCCAGCCGATGCCTCAGGAACCCGCTGGGCC...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGAGCAGAATGGGCTCCTaGCTCCCGCCCCCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RETSILQEEYATSHASHMSRMGS*LPPPAS Trigger: AGAGGCAGGGGGCGGGAGCCAGGAGCCCATTCTGCT...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR TCA 90 bp | AGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCTCGTTTGCCTCCTGGTaGGGCCCCATCTGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHVKHLFCRKNTLQVTLVSFASW*GPICSS Trigger: GGAGGAGCAGATGGGGCCTCACCAGGAGGCAAACGA...GACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR TCA 90 bp | CACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACAGTTATCCACTGGAGCTaGGCTGACAGCGGCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: HVKHLFCRKNTLQVTLVTVIHWS*ADSGQS Trigger: GCTCTGGCCGCTGTCAGCTCAGCTCCAGTGGATAAC...TGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR TCA 90 bp | AGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCGCCGGCACTCAGGGGTaGTCGTTGGAACACTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RHVKHLFCRKNTLQVTLVAGTQG*SLEHWT Trigger: AGTCCAGTGTTCCAACGATCACCCCTGAGTGCCGGC...GACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR GCA 90 bp | ATTGTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACACTGGCTCCCGCCCCCTaGCTCTGTGTTGGCGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IVCVSTTVTRSLSQTRETLAPAP*LCVGVH Trigger: ATGGACGCCAACACAGAGGCAGGGGGCGGGAGCCAG...TGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAACAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | AGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCTCCTGGCTCTGGTCCTaGTCGGTAAGCTCCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RHVKHLFCRKNTLQVTLVSWLWS*SVSSWG Trigger: ACCCCAGGAGCTTACCGACCAGGACCAGAGCCAGGA...GACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR GCA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGCCTAGCTGCTCTTCCTaGTGCCACCATCTCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RETSILQEEYATSHASHMPSCSS*CHHLPW Trigger: CCAAGGGAGATGGTGGCAGCAGGAAGAGCAGCTAGG...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | ATTGTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACACCGCTTCTCCCGTGGTaGTGTCTGGGCCTGCGTTTG | + |
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Preference number: 4 (lower is better) Translates to: IVCVSTTVTRSLSQTRETPLLPW*CLGLRL Trigger: CAAACGCAGGCCCAGACACCACCACGGGAGAAGCGG...TGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | ATTGTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACACCCCTGCCTCTGTGTTaGCGTCCATTTGCCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: IVCVSTTVTRSLSQTRETPLPLC*RPFAPS Trigger: CGAGGGGGCAAATGGACGCCAACACAGAGGCAGGGG...TGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAACAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | ATTGTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACAGTGTCAAGAGCAGAATaGGCTCCTGGCTCCCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IVCVSTTVTRSLSQTRETVSRAE*APGSRP Trigger: GGGGCGGGAGCCAGGAGCCCATTCTGCTCTTGACAC...TGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR TCA 90 bp | GTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACATCTGGACGGAGACTCTCTTaGTCATCCACTCCCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVSTTVTRSLSQTRETSGRRLS*SSTPSR Trigger: CCGAGAGGGAGTGGATGATCAAGAGAGTCTCCGTCC...AGATGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR GCA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGCTCTTCTTCAGGACTTaGCGGCACTCAGGGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RETSILQEEYATSHASHMLFFRT*RHSGVI Trigger: GATCACCCCTGAGTGCCGGCAAGTCCTGAAGAAGAG...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR GCA 90 bp | CACGGTCATTGTCACAGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTACTCCACTCTCCTGGCTaGTTTGCTCCCTACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HGHCHRHVKHLFCRKNTLLHSPG*FAPYCV Trigger: CACACAGTAGGGAGCAAAGCAGCCAGGAGAGTGGAG...TAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCTGTGACAATGACCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | AGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCTCTCCTCCAGCTCCATaGAGTGTGCATCTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RHVKHLFCRKNTLQVTLVSPPAP*SVHLLW Trigger: CCAGAGCAGATGCACACTCCATGGAGCTGGAGGAGA...GACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | AGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCTCCTCTCCACTCTCCTaGCTGCTTTGCTCCCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: RHVKHLFCRKNTLQVTLVSSPLS*LLCSLL Trigger: CAGTAGGGAGCAAAGCAGCCAGGAGAGTGGAGAGGA...GACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | CACGGTCATTGTCACAGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTAGATTCTTCCTGGCTCTaGTCCTGGTCGGTAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HGHCHRHVKHLFCRKNTLDSSWL*SWSVSS Trigger: GGAGCTTACCGACCAGGACCAGAGCCAGGAAGAATC...TAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCTGTGACAATGACCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | CACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATCCTGGGATTCTTCCTaGCTCTGGTCCTGGTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HVKHLFCRKNTLQVTLVTSWDSS*LWSWSV Trigger: TACCGACCAGGACCAGAGCCAGGAAGAATCCCAGGA...TGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | CACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATCCCGTGGTGGTGTCTaGGCCTGCGTTTGGTTACTT | + |
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Preference number: 4 (lower is better) Translates to: HVKHLFCRKNTLQVTLVTSRGGV*ACVWLL Trigger: AAGTAACCAAACGCAGGCCCAGACACCACCACGGGA...TGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGCCTCCTTGGACTCCTTaGGAGAGGGTCTCCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: RETSILQEEYATSHASHMPPWTP*ERVSFP Trigger: AGGAAAGGAGACCCTCTCCCAAGGAGTCCAAGGAGG...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR TCA 90 bp | AGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCTTATACTCCCTTTCCTaGCTCTCCTCACTCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: RHVKHLFCRKNTLQVTLVLYSLS*LSSLRG Trigger: GCCTCGGAGTGAGGAGAGTCAGGAAAGGGAGTATAA...GACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR TCA 90 bp | CACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACACCAATTCACATCCTCTaGGAAGGGCCTTCTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: HVKHLFCRKNTLQVTLVTPIHIL*EGPSLP Trigger: TGGGAGAGAAGGCCCTTCTCAGAGGATGTGAATTGG...TGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR GCA 90 bp | CACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACACTCTCCTGGCTGCTTTaGTCCCTACTGTGTGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HVKHLFCRKNTLQVTLVTLSWLL*SLLCVF Trigger: GAAGACACACAGTAGGGAGCAAAGCAGCCAGGAGAG...TGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | CACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACAGTCTGGGCCTGCGTTTaGTTACTTCAGAGGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: HVKHLFCRKNTLQVTLVTVWACV*LLQRLS Trigger: ACTCAGCCTCTGAAGTAACCAAACGCAGGCCCAGAC...TGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGCTCTCTGGTCAGCCCTaGCCTTTTCATCGTTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: RETSILQEEYATSHASHMLSGQP*PFHRLP Trigger: AGGCAAACGATGAAAAGGCCAGGGCTGACCAGAGAG...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR GCA 90 bp | CACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACAACCTTACTTCCTCCCTaGTTTCTTCCGGTCCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: HVKHLFCRKNTLQVTLVTTLLPP*FLPVLA Trigger: AGCTAGGACCGGAAGAAAGCAGGGAGGAAGTAAGGT...TGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | GTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACATCTCCTGTGCTCCCCCATTaGGTAAATCTTGCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VCVSTTVTRSLSQTRETSPVLPH*VNLAFF Trigger: GAAGAAGGCAAGATTTACCCAATGGGGGAGCACAGG...AGATGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGCCTCGCTTCTTTTGTTaGAGAAGGTGTTCGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RETSILQEEYATSHASHMPRFFC*RRCSAS Trigger: AGAAGCCGAACACCTTCTCCAACAAAAGAAGCGAGG...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | AGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCTCACTATTCTTCCACTaGAGAGGGTCAAAGTACGGG | + |
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Preference number: 4 (lower is better) Translates to: RHVKHLFCRKNTLQVTLVSLFFH*RGSKYG Trigger: CCCGTACTTTGACCCTCTCCAGTGGAAGAATAGTGA...GACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| 3UTR CAA 72 bp | ACACGGTCATTGTCACAGACACGTGAAACATCTATTTaGCAGGAAGAATACGCTACAAGTCACGCTAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: TRSLSQTRETSI*QEEYATSHASH Trigger: GTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCTGTGACAATGACCGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR GCA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGCCTGCTCTTGCCATTTaGTTTGTGGGTACCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: RETSILQEEYATSHASHMPALAI*FVGTFL Trigger: CAAAAAGGTACCCACAAAGCAAATGGCAAGAGCAGG...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR TCA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGACCATTTCTTCATTGTaGTCCCTGTTATCCACTGGA | + |
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Preference number: 4 (lower is better) Translates to: RETSILQEEYATSHASHMTISSL*SLLSTG Trigger: TCCAGTGGATAACAGGGATCACAATGAAGAAATGGT...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR TCA 90 bp | CACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACACTTTCTCTTCACCTTTaGCCTCTTTTCCACTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HVKHLFCRKNTLQVTLVTLSLHL*PLFHSS Trigger: AGAAGAGTGGAAAAGAGGTCAAAGGTGAAGAGAAAG...TGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR GCA 90 bp | CACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACACCATTGGGTAAATCTTaGCTTCTTCTTTCTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: HVKHLFCRKNTLQVTLVTPLGKS*LLLSPS Trigger: AGAGGGAGAAAGAAGAAGGCAAGATTTACCCAATGG...TGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR GCA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGTTTTTCTCCTGCTCTTaGCATTTGCTTTGTGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: RETSILQEEYATSHASHMFFSCS*HLLCGY Trigger: GTACCCACAAAGCAAATGGCAAGAGCAGGAGAAAAA...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | GTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACATCTTTGGAACACTGGACTTaGATAGGGCATTTGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: VCVSTTVTRSLSQTRETSLEHWT*IGHLRG Trigger: TCCTCTCAAATGCCCTATCCAAGTCCAGTGTTCCAA...AGATGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGATATCTTTGCTTCTTTaGACGCTTGTTGGTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RETSILQEEYATSHASHMISLLL*TLVGWR Trigger: CCTCCAACCAACAAGCGTCCAAAGAAGCAAAGATAT...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | GTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACATCTAGTGTGCATCTGCTCTaGCCACTGACTCATCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: VCVSTTVTRSLSQTRETSSVHLL*PLTHLF Trigger: AAAAAGATGAGTCAGTGGCCAGAGCAGATGCACACT...AGATGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | CACGGTCATTGTCACAGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTACTCATATTGTCTGTCTaGAAACCTTACTTCCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: HGHCHRHVKHLFCRKNTLLILSV*KPYFLP Trigger: AGGGAGGAAGTAAGGTTTCCAGACAGACAATATGAG...TAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCTGTGACAATGACCGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR GCA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGCGAATGGTATATCTTTaGTTCTTTGGACGCTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: RETSILQEEYATSHASHMRMVYL*FFGRLL Trigger: CAACAAGCGTCCAAAGAAGCAAAGATATACCATTCG...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS-3UTR CCA 90 bp | GTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACATCTTTGCCATTTGCTTTGTaGGTACCTTTTTGCCGTATC | + |
|
Preference number: 4 (lower is better) Translates to: VCVSTTVTRSLSQTRETSLPFAL*VPFCRI Trigger: GATACGGCAAAAAGGTACCCACAAAGCAAATGGCAA...AGATGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CCA 90 bp | CACGGTCATTGTCACAGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTAGTCATAGTTGTACTCTaGGAAGGAATTCTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HGHCHRHVKHLFCRKNTLVIVVL*EGILLS Trigger: ACTGAGAAGAATTCCTTCCCAGAGTACAACTATGAC...TAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCTGTGACAATGACCGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR GCA 90 bp | ATTGTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACATTCACCATGTCTGTTTaGTGTGCTTTCCAGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IVCVSTTVTRSLSQTRETFTMSV*CAFQFR Trigger: TCTGAACTGGAAAGCACAGCAAACAGACATGGTGAA...TGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAACAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR GCA 90 bp | ATTGTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACAAACTGTCATCTGGGTTaGCTCTTTTCTCAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IVCVSTTVTRSLSQTRETNCHLG*LFSQSH Trigger: GTGACTTTGAGAAAAGAGGCAACCCAGATGACAGTT...TGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CCA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGTCAAACTTCGAGTTCTaGTTTTCACCTTTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RETSILQEEYATSHASHMSNFEF*FSPFSS Trigger: TGAAGAGAAAGGTGAAAACCAGAACTCGAAGTTTGA...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CCA 90 bp | CACGGTCATTGTCACAGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTAAAGAAAACTGTCATCTaGGTTGCCTCTTTTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HGHCHRHVKHLFCRKNTLKKTVI*VASFLK Trigger: TTTGAGAAAAGAGGCAACCCAGATGACAGTTTTCTT...TAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCTGTGACAATGACCGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| 3UTR CAA 72 bp | TTTATTGTTTGTGTTTCAACAACAGTAACACGGTCATaGTCACAGACACGTGAAACATCTATTTTGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FIVCVSTTVTRS*SQTRETSILQE Trigger: TTCCTGCAAAATAGATGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAACAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS GCA 90 bp | ATGGGCTCCTGGCTCCCGCCCCCTGCCTCTGTGTTGGCGTCCATTTaGCCCCTCGTAGCTCCTCTCTTCCTCGGTTTCTTCACCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MGSWLPPPASVLASI*PLVAPLFLGFFTMS Trigger: AGACATGGTGAAGAAACCGAGGAAGAGAGGAGCTACGAGGGGGCAAATGGACGCCAACACAGAGGCAGGGGGCGGGAGCCAGGAGCCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS GCA 90 bp | CTTCTCTGGTGTCAAGAGCAGAATGGGCTCCTGGCTCCCGCCCCCTaGCTCTGTGTTGGCGTCCATTTGCCCCCTCGTAGCTCCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLWCQEQNGLLAPAP*LCVGVHLPPRSSSL Trigger: AAGAGAGGAGCTACGAGGGGGCAAATGGACGCCAACACAGAGGCAGGGGGCGGGAGCCAGGAGCCCATTCTGCTCTTGACACCAGAGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS CCA 90 bp | TCTGGCCTTGAGAGTCTTCTACTGGAGCGCCTGCATCCTCCCTACTaGAGGCCCAGCGGGTTCCTGAGGCATCGGCTGGGTCTCTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGLESLLLERLHPPY*RPSGFLRHRLGLLA Trigger: TGCTAAGAGACCCAGCCGATGCCTCAGGAACCCGCTGGGCCTCCAGTAGGGAGGATGCAGGCGCTCCAGTAGAAGACTCTCAAGGCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS GCA 90 bp | TCTTCCTGGCTCTGGTCCTGGTCGGTAAGCTCCTGGGGTTTCTCCTaGCTCCTTGTCTCCTCTCCACTCTCCTGGCTGCTTTGCTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: SSWLWSWSVSSWGFS*LLVSSPLSWLLCSL Trigger: TAGGGAGCAAAGCAGCCAGGAGAGTGGAGAGGAGACAAGGAGGCAGGAGAAACCCCAGGAGCTTACCGACCAGGACCAGAGCCAGGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS GCA 90 bp | AGGCCCCATCTGCTCCTCCGAGTCGTAGAAATCGGGAAATTCGTCTaGCTTCTTCCTGTAGTGAAGCAGCTGGTCCAACTCGGCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPHLLLRVVEIGKFV*LLPVVKQLVQLGHS Trigger: GGAGTGGCCGAGTTGGACCAGCTGCTTCACTACAGGAAGAAGGCAGACGAATTTCCCGATTTCTACGACTCGGAGGAGCAGATGGGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS CCA 90 bp | CTTCGTAAGAGGACTTGTTGGACCCGCTTCTCCCGTGGTGGTGTCTaGGCCTGCGTTTGGTTACTTCAGAGGCTGAGTCTTCCTCGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRKRTCWTRFSRGGV*ACVWLLQRLSLPRL Trigger: AAGGCGAGGAAGACTCAGCCTCTGAAGTAACCAAACGCAGGCCCAGACACCACCACGGGAGAAGCGGGTCCAACAAGTCCTCTTACGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS TCA 90 bp | CTTTCCAGTTCAGAGTCGGGGTGGTTTCTCTTATACTCCCTTTCCTaGCTCTCCTCACTCCGAGGCCTTGGGGCTCTGTCCTCTTCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSESGWFLLYSLS*LSSLRGLGALSSSL Trigger: AAGCGAAGAGGACAGAGCCCCAAGGCCTCGGAGTGAGGAGAGTCAGGAAAGGGAGTATAAGAGAAACCACCCCGACTCTGAACTGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS TCA 90 bp | CTTCCTGCTGCCACCATCTCCCTTGGTCCCCTTCCTCGCCATAGTTaGGGTAGTTTTTCTCCTGCTCTTGCCATTTGCTTTGTGGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: LPAATISLGPLPRHS*GSFSPALAICFVGT Trigger: GGTACCCACAAAGCAAATGGCAAGAGCAGGAGAAAAACTACCTCAACTATGGCGAGGAAGGGGACCAAGGGAGATGGTGGCAGCAGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS GCA 90 bp | TGGGATAGGGCTCATATTGTCTGTCTGGAAACCTTACTTCCTCCCTaGTTTCTTCCGGTCCTAGCTGCTCTTCCTGCTGCCACCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WDRAHIVCLETLLPP*FLPVLAALPAATIS Trigger: GGAGATGGTGGCAGCAGGAAGAGCAGCTAGGACCGGAAGAAAGCAGGGAGGAAGTAAGGTTTCCAGACAGACAATATGAGCCCTATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS GCA 90 bp | CCTTTCTCTTCACCTTTGACCTCTTTTCCACTCTTCTTCAGGACTTaGCGGCACTCAGGGGTGATCGTTGGAACACTGGACTTGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: PFSSPLTSFPLFFRT*RHSGVIVGTLDLDR Trigger: CCTATCCAAGTCCAGTGTTCCAACGATCACCCCTGAGTGCCGGCAAGTCCTGAAGAAGAGTGGAAAAGAGGTCAAAGGTGAAGAGAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | CACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACACTGCCACCATCTCCCTaGGTCCCCTTCCTCGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: HVKHLFCRKNTLQVTLVTLPPSP*VPFLAI Trigger: TATGGCGAGGAAGGGGACCAAGGGAGATGGTGGCAG...TGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS GCA 90 bp | CGTAGCTCCTCTCTTCCTCGGTTTCTTCACCATGTCTGTTTGCTGTaGTTTCCAGTTCAGAGTCGGGGTGGTTTCTCTTATACTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSSSLPRFLHHVCLL*FPVQSRGGFSYTPF Trigger: AAAGGGAGTATAAGAGAAACCACCCCGACTCTGAACTGGAAAGCACAGCAAACAGACATGGTGAAGAAACCGAGGAAGAGAGGAGCTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | GTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACATCTGCCTCCTTGGACTCCTaGGGAGAGGGTCTCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVSTTVTRSLSQTRETSASLDS*GEGLLS Trigger: GGAAAGGAGACCCTCTCCCAAGGAGTCCAAGGAGGC...AGATGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS GCA 90 bp | GTAGTTTTTCTCCTGCTCTTGCCATTTGCTTTGTGGGTACCTTTTTaGCGTATCTATTGGGCTTTCGCGAACAGGGTAGTGCCCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VVFLLLLPFALWVPF*RIYWAFANRVVPFI Trigger: GATGAAGGGCACTACCCTGTTCGCGAAAGCCCAATAGATACGGCAAAAAGGTACCCACAAAGCAAATGGCAAGAGCAGGAGAAAAACTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | CACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATTGGACGCTTGTTGGTaGGAGGGACGGAGACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HVKHLFCRKNTLQVTLVTLDACW*EGRRLS Trigger: AGAGAGTCTCCGTCCCTCCAACCAACAAGCGTCCAA...TGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | ATTGTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACAGCCACATCTGCCTCCTaGGACTCCTTGGGAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: IVCVSTTVTRSLSQTRETATSAS*DSLGEG Trigger: ACCCTCTCCCAAGGAGTCCAAGGAGGCAGATGTGGC...TGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGTTCTTTGGACGCTTGTaGGTTGGAGGGACGGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: RETSILQEEYATSHASHMFFGRL*VGGTET Trigger: AGTCTCCGTCCCTCCAACCAACAAGCGTCCAAAGAA...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | AGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCGCCTCGCTTCTTTTGTaGGAGAAGGTGTTCGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RHVKHLFCRKNTLQVTLVASLLL*EKVFGF Trigger: GAAGCCGAACACCTTCTCCAACAAAAGAAGCGAGGC...GACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | CACGGTCATTGTCACAGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTAGTTGGAACACTGGACTaGGATAGGGCATTTGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HGHCHRHVKHLFCRKNTLVGTLD*DRAFER Trigger: CCTCTCAAATGCCCTATCCAAGTCCAGTGTTCCAAC...TAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCTGTGACAATGACCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | GTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACATCTACTCTCCTGGCTGCTTaGCTCCCTACTGTGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VCVSTTVTRSLSQTRETSTLLAA*LPTVCL Trigger: AAGACACACAGTAGGGAGCAAAGCAGCCAGGAGAGT...AGATGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | CACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACACTTCACCATGTCTGTTaGCTGTGCTTTCCAGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HVKHLFCRKNTLQVTLVTLHHVC*LCFPVQ Trigger: CTGAACTGGAAAGCACAGCAAACAGACATGGTGAAG...TGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | CGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCACATGCCTTTCTCTTCACCTTaGACCTCTTTTCCACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RETSILQEEYATSHASHMPFSSP*TSFPLF Trigger: GAAGAGTGGAAAAGAGGTCAAAGGTGAAGAGAAAGG...CATGTGACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | AGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTACAAGTCACGCTAGTCGTTTTTCTCCTGCTCTaGCCATTTGCTTTGTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RHVKHLFCRKNTLQVTLVVFLLL*PFALWV Trigger: TACCCACAAAGCAAATGGCAAGAGCAGGAGAAAAAC...GACTAGCGTGACTTGTAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | ATTGTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACACTCTTGCCATTTGCTTaGTGGGTACCTTTTTGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: IVCVSTTVTRSLSQTRETLLPFA*WVPFCR Trigger: ACGGCAAAAAGGTACCCACAAAGCAAATGGCAAGAG...TGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | CACGGTCATTGTCACAGACACGTGAAACATCTATTTTGCAGGAAGAATACGCTAAAACTGTCATCTGGGTaGCCTCTTTTCTCAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HGHCHRHVKHLFCRKNTLKLSSG*PLFSKS Trigger: TGACTTTGAGAAAAGAGGCAACCCAGATGACAGTTT...TAGCGTATTCTTCCTGCAAAATAGATGTTTCACGTGTCTGTGACAATGACCGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | ATTGTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACATCCTGCTCTTGCCATTaGCTTTGTGGGTACCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: IVCVSTTVTRSLSQTRETSCSCH*LCGYLF Trigger: AAAAAGGTACCCACAAAGCAAATGGCAAGAGCAGGA...TGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS-3UTR CAA 90 bp | ATTGTTTGTGTTTCAACAACAGTAACACGGTCATTGTCACAGACACGTGAAACACCGAATGGTATATCTTaGCTTCTTTGGACGCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IVCVSTTVTRSLSQTRETPNGIS*LLWTLV Trigger: AACAAGCGTCCAAAGAAGCAAAGATATACCATTCGG...TGTTTCACGTGTCTGTGACAATGACCGTGTTACTGTTGTTGAAACACAAACAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS CCA 72 bp | GAGAGTCTTCTACTGGAGCGCCTGCATCCTCCCTACTaGAGGCCCAGCGGGTTCCTGAGGCATCGGCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ESLLLERLHPPY*RPSGFLRHRLG Trigger: ACCCAGCCGATGCCTCAGGAACCCGCTGGGCCTCCAGTAGGGAGGATGCAGGCGCTCCAGTAGAAGACTCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS CAA 90 bp | GTCAAGAGCAGAATGGGCTCCTGGCTCCCGCCCCCTGCCTCTGTGTaGGCGTCCATTTGCCCCCTCGTAGCTCCTCTCTTCCTCGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VKSRMGSWLPPPASV*ASICPLVAPLFLGF Trigger: GAAACCGAGGAAGAGAGGAGCTACGAGGGGGCAAATGGACGCCAACACAGAGGCAGGGGGCGGGAGCCAGGAGCCCATTCTGCTCTTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS TCA 72 bp | CTTCATTGTGATCCCTGTTATCCACTGGAGCTGAGCTaGCAGCGGCCAGAGCCGCTGCGCCCAGGAGGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LHCDPCYPLELS*QRPEPLRPGGR Trigger: TCGGCCTCCTGGGCGCAGCGGCTCTGGCCGCTGTCAGCTCAGCTCCAGTGGATAACAGGGATCACAATGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS GCA 72 bp | TCCTCCCTGCTTTCTTCCGGTCCTAGCTGCTCTTCCTaGTGCCACCATCTCCCTTGGTCCCCTTCCTCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLLSSGPSCSS*CHHLPWSPSSP Trigger: TGGCGAGGAAGGGGACCAAGGGAGATGGTGGCAGCAGGAAGAGCAGCTAGGACCGGAAGAAAGCAGGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS CCA 72 bp | ATTGCCTACCTTCGTCTGGCCTTGAGAGTCTTCTACTaGAGCGCCTGCATCCTCCCTACTGGAGGCCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: IAYLRLALRVFY*SACILPTGGPA Trigger: CGCTGGGCCTCCAGTAGGGAGGATGCAGGCGCTCCAGTAGAAGACTCTCAAGGCCAGACGAAGGTAGGCAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS TCA 72 bp | CATTTCTTCATTGTGATCCCTGTTATCCACTGGAGCTaGGCTGACAGCGGCCAGAGCCGCTGCGCCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HFFIVIPVIHWS*ADSGQSRCAQE Trigger: CTCCTGGGCGCAGCGGCTCTGGCCGCTGTCAGCTCAGCTCCAGTGGATAACAGGGATCACAATGAAGAAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS CCA 72 bp | AGGACTTGTTGGACCCGCTTCTCCCGTGGTGGTGTCTaGGCCTGCGTTTGGTTACTTCAGAGGCTGAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RTCWTRFSRGGV*ACVWLLQRLSL Trigger: AAGACTCAGCCTCTGAAGTAACCAAACGCAGGCCCAGACACCACCACGGGAGAAGCGGGTCCAACAAGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS CCA 72 bp | AACGGACTGTGGCCACATCTGCCTCCTTGGACTCCTTaGGAGAGGGTCTCCTTTCCTCAGATAGAGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: NGLWPHLPPWTP*ERVSFPQIEDA Trigger: GGCATCCTCTATCTGAGGAAAGGAGACCCTCTCCCAAGGAGTCCAAGGAGGCAGATGTGGCCACAGTCCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS CCA 72 bp | TTTTTCTTCTCTGGTGTCAAGAGCAGAATGGGCTCCTaGCTCCCGCCCCCTGCCTCTGTGTTGGCGTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: FFFSGVKSRMGS*LPPPASVLASI Trigger: AATGGACGCCAACACAGAGGCAGGGGGCGGGAGCCAGGAGCCCATTCTGCTCTTGACACCAGAGAAGAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS CAA 72 bp | AAACGGACTGTGGCCACATCTGCCTCCTTGGACTCCTaGGGAGAGGGTCTCCTTTCCTCAGATAGAGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: KRTVATSASLDS*GEGLLSSDRGC Trigger: GCATCCTCTATCTGAGGAAAGGAGACCCTCTCCCAAGGAGTCCAAGGAGGCAGATGTGGCCACAGTCCGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS CAA 90 bp | CTTCCTGTAGTGAAGCAGCTGGTCCAACTCGGCCACTCCATCATATaGCCGTTTCAAGTCGAGCTGAGGGGCCCTGGCAAAGCTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LPVVKQLVQLGHSII*PFQVELRGPGKASL Trigger: AAGAGAAGCTTTGCCAGGGCCCCTCAGCTCGACTTGAAACGGCAATATGATGGAGTGGCCGAGTTGGACCAGCTGCTTCACTACAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS CAA 90 bp | TTCAGGACTTGCCGGCACTCAGGGGTGATCGTTGGAACACTGGACTaGGATAGGGCATTTGAGAGGACTTCGATAATGCAGCGAGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: FRTCRHSGVIVGTLD*DRAFERTSIMQRVT Trigger: GGTGACTCGCTGCATTATCGAAGTCCTCTCAAATGCCCTATCCAAGTCCAGTGTTCCAACGATCACCCCTGAGTGCCGGCAAGTCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
||
| CDS TCA 72 bp | TTCCACTCTTCTTCAGGACTTGCCGGCACTCAGGGGTaGTCGTTGGAACACTGGACTTGGATAGGGCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: FHSSSGLAGTQG*SLEHWTWIGHL Trigger: CAAATGCCCTATCCAAGTCCAGTGTTCCAACGATCACCCCTGAGTGCCGGCAAGTCCTGAAGAAGAGTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS CCA 72 bp | TTTGCTCCCTACTGTGTGTCTTCTCCTCCAGCTCCATaGAGTGTGCATCTGCTCTGGCCACTGACTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: FAPYCVSSPPAP*SVHLLWPLTHL Trigger: AAGATGAGTCAGTGGCCAGAGCAGATGCACACTCCATGGAGCTGGAGGAGAAGACACACAGTAGGGAGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS CAA 72 bp | TGCCGGCACTCAGGGGTGATCGTTGGAACACTGGACTaGGATAGGGCATTTGAGAGGACTTCGATAATGCAG | + |
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Preference number: 6 (lower is better) Translates to: CRHSGVIVGTLD*DRAFERTSIMQ Trigger: CTGCATTATCGAAGTCCTCTCAAATGCCCTATCCAAGTCCAGTGTTCCAACGATCACCCCTGAGTGCCGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS TCA 72 bp | GCCACCATCTCCCTTGGTCCCCTTCCTCGCCATAGTTaGGGTAGTTTTTCTCCTGCTCTTGCCATTTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ATISLGPLPRHS*GSFSPALAICF Trigger: AAAGCAAATGGCAAGAGCAGGAGAAAAACTACCTCAACTATGGCGAGGAAGGGGACCAAGGGAGATGGTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS GCA 72 bp | CTCTTTTCCCACCCTCTCTTCCGAATGGTATATCTTTaGTTCTTTGGACGCTTGTTGGTTGGAGGGACGGAG | + |
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Preference number: 6 (lower is better) Translates to: LFSHPLFRMVYL*FFGRLLVGGTE Trigger: CTCCGTCCCTCCAACCAACAAGCGTCCAAAGAAGCAAAGATATACCATTCGGAAGAGAGGGTGGGAAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS CAA 72 bp | GCCATTTGCTTTGTGGGTACCTTTTTGCCGTATCTATaGGGCTTTCGCGAACAGGGTAGTGCCCTTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: AICFVGTFLPYL*GFREQGSALHP Trigger: TGGATGAAGGGCACTACCCTGTTCGCGAAAGCCCAATAGATACGGCAAAAAGGTACCCACAAAGCAAATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS CAA 72 bp | TCACTATTCTTCCACTGGAGAGGGTCAAAGTACGGGTaGAACAGCGCCCCTAACCTCTTCCTCTTTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SLFFHWRGSKYG*NSAPNLFLFSV Trigger: CACTGAAAAGAGGAAGAGGTTAGGGGCGCTGTTCAACCCGTACTTTGACCCTCTCCAGTGGAAGAATAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS TCA 72 bp | ACTTCGATAATGCAGCGAGTCACCATTTCTTCATTGTaGTCCCTGTTATCCACTGGAGCTGAGCTGACAGCG | + |
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Preference number: 6 (lower is better) Translates to: TSIMQRVTISSL*SLLSTGAELTA Trigger: CGCTGTCAGCTCAGCTCCAGTGGATAACAGGGATCACAATGAAGAAATGGTGACTCGCTGCATTATCGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS CCA 72 bp | CCATTTGCTTTGTGGGTACCTTTTTGCCGTATCTATTaGGCTTTCGCGAACAGGGTAGTGCCCTTCATCCAA | + |
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Preference number: 6 (lower is better) Translates to: PFALWVPFCRIY*AFANRVVPFIQ Trigger: TTGGATGAAGGGCACTACCCTGTTCGCGAAAGCCCAATAGATACGGCAAAAAGGTACCCACAAAGCAAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS CAA 72 bp | TCTCTTTTCCCACCCTCTCTTCCGAATGGTATATCTTaGCTTCTTTGGACGCTTGTTGGTTGGAGGGACGGA | + |
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Preference number: 6 (lower is better) Translates to: SLFPPSLPNGIS*LLWTLVGWRDG Trigger: TCCGTCCCTCCAACCAACAAGCGTCCAAAGAAGCAAAGATATACCATTCGGAAGAGAGGGTGGGAAAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS CAA 72 bp | TCTTCTCTTCACCAGCATCTTCCCTGTGCTCCCCCATaGGGTAAATCTTGCCTTCTTCTTTCTCCCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSLHQHLPCAPP*GKSCLLLSPSL Trigger: AAGAGAGGGAGAAAGAAGAAGGCAAGATTTACCCAATGGGGGAGCACAGGGAAGATGCTGGTGAAGAGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS CAA 90 bp | GGTAGTTTTTCTCCTGCTCTTGCCATTTGCTTTGTGGGTACCTTTTaGCCGTATCTATTGGGCTTTCGCGAACAGGGTAGTGCCCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: GSFSPALAICFVGTF*PYLLGFREQGSALH Trigger: ATGAAGGGCACTACCCTGTTCGCGAAAGCCCAATAGATACGGCAAAAAGGTACCCACAAAGCAAATGGCAAGAGCAGGAGAAAAACTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS CAA 90 bp | CTCGCCATAGTTGAGGTAGTTTTTCTCCTGCTCTTGCCATTTGCTTaGTGGGTACCTTTTTGCCGTATCTATTGGGCTTTCGCGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: LAIVEVVFLLLLPFA*WVPFCRIYWAFANR Trigger: CCTGTTCGCGAAAGCCCAATAGATACGGCAAAAAGGTACCCACAAAGCAAATGGCAAGAGCAGGAGAAAAACTACCTCAACTATGGCGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS CCA 72 bp | GAGGTAGTTTTTCTCCTGCTCTTGCCATTTGCTTTGTaGGTACCTTTTTGCCGTATCTATTGGGCTTTCGCG | + |
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Preference number: 6 (lower is better) Translates to: EVVFLLLLPFAL*VPFCRIYWAFA Trigger: CGCGAAAGCCCAATAGATACGGCAAAAAGGTACCCACAAAGCAAATGGCAAGAGCAGGAGAAAAACTACCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS CAA 72 bp | TTCCTCGCCATAGTTGAGGTAGTTTTTCTCCTGCTCTaGCCATTTGCTTTGTGGGTACCTTTTTGCCGTATC | + |
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Preference number: 6 (lower is better) Translates to: FLAIVEVVFLLL*PFALWVPFCRI Trigger: GATACGGCAAAAAGGTACCCACAAAGCAAATGGCAAGAGCAGGAGAAAAACTACCTCAACTATGGCGAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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| CDS CAA 72 bp | GTTGAGGTAGTTTTTCTCCTGCTCTTGCCATTTGCTTaGTGGGTACCTTTTTGCCGTATCTATTGGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VEVVFLLLLPFA*WVPFCRIYWAF Trigger: GAAAGCCCAATAGATACGGCAAAAAGGTACCCACAAAGCAAATGGCAAGAGCAGGAGAAAAACTACCTCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028826.4 |
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