Pregenerated sensors for CHGA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021194Ensembl transcript IDs: ENSMUST00000021610.7
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGTGCCCCATGGATAAGAAGGTGGAAGAGAAACTTCTAGAAAGCTaGCTGTGTTCAGAGAAGGAATCTGTGCTGACATTCAGGGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: LCPMDKKVEEKLLES*LCSEKESVLTFRAA Trigger: GGCAGCCCTGAATGTCAGCACAGATTCCTTCTCTGAACACAGGCAGCTTTCTAGAAGTTTCTCTTCCACCTTCTTATCCATGGGGCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGGTGAGGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTGCAGCAGTCTGGCCTTaGAGCCATGGCTGGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: EKVRGKGGNLGSVAGSSPAAVWP*SHGWPH Trigger: GTGGGGCCAGCCATGGCTTCAAGGCCAGACTGCTGC...AGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCCTCACCTTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGTTCAGAGAAGGAATCTGTGCTGACATTCAGGGCTGCCCTGCAGAAGTGGCAAAGGGGGTAACCTaGGCTCTGTGGCTGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PVFREGICADIQGCPAEVAKGVT*ALWLEA Trigger: TGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGC...CACTTCTGCAGGGCAGCCCTGAATGTCAGCACAGATTCCTTCTCTGAACACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| 3UTR-3UTR TCA 90 bp | CTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATAAGAAGGTGGTCCAGGGCAGGGGCTaGGAACAAGAGAAGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LSPKGQKLLQLCPMDKKVVQGRG*EQEKVR Trigger: CCTCACCTTCTCTTGTTCTCAGCCCCTGCCCTGGAC...CACCTTCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATAAGAAGGTGGAAGAGACATTCAGGGCTGCCCTaGAGAAGTGTCCAGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PKVRSYCSCAPWIRRWKRHSGLP*RSVQGR Trigger: CCTGCCCTGGACACTTCTGCAGGGCAGCCCTGAATG...TCTCTTCCACCTTCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| 3UTR-3UTR GCA 90 bp | TATCTGGAATATCTTAATAGTCAGGAGTTCTCGGCTTTCGCCCAAAGGTCAGAAGCTGACATTCAGGGCTaGCCTGCAGAAGTGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: YLEYLNSQEFSAFAQRSEADIQG*PAEVSR Trigger: CCTGGACACTTCTGCAGGGCAGCCCTGAATGTCAGC...TTCTGACCTTTGGGCGAAAGCCGAGAACTCCTGACTATTAAGATATTCCAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| 3UTR CAA 90 bp | TTAATAGTCAGGAGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATaGCAGTTGTGCCCCATGGATAAGAAGGTGGAAGAGAAACTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LIVRSSRLSPKGQKL*QLCPMDKKVEEKLL Trigger: TAGAAGTTTCTCTTCCACCTTCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAGAACTCCTGACTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| 3UTR-3UTR GCA 90 bp | TTTATCTGGAATATCTTAATAGTCAGGAGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTaGCCCATGGATAAGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: FIWNILIVRSSRLSPKGQKLLQL*PMDKKV Trigger: CACCTTCTTATCCATGGGGCACAACTGCAATAACTT...CTGACCTTTGGGCGAAAGCCGAGAACTCCTGACTATTAAGATATTCCAGATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| 3UTR GCA 72 bp | GGAGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTaGAGTTGTGCCCCATGGATAAGAAGGTGGAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: GVLGFRPKVRSY*SCAPWIRRWKR Trigger: TCTCTTCCACCTTCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAGAACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| 3UTR GCA 72 bp | CGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTaGCCCATGGATAAGAAGGTGGAAGAGAAACTTCTA | + |
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Preference number: 3 (lower is better) Translates to: RLSPKGQKLLQL*PMDKKVEEKLL Trigger: TAGAAGTTTCTCTTCCACCTTCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| 3UTR GCA 72 bp | ATGGATAAGAAGGTGGAAGAGAAACTTCTAGAAAGCTaGCTGTGTTCAGAGAAGGAATCTGTGCTGACATTC | + |
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Preference number: 3 (lower is better) Translates to: MDKKVEEKLLES*LCSEKESVLTF Trigger: GAATGTCAGCACAGATTCCTTCTCTGAACACAGGCAGCTTTCTAGAAGTTTCTCTTCCACCTTCTTATCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR TCA 90 bp | GGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCGAGCAGGAGGCCCAGGATCTCTaGAGCCATAGGCGCGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GAKGVTWALWLEAALLEQEAQDL*SHRRGS Trigger: GGACCCGCGCCTATGGCTTCAGAGATCCTGGGCCTC...CTGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR GCA 90 bp | GGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCGAGCAGTGCTTCGGCGGCTGCTaGTGCTTCAGCGGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GAKGVTWALWLEAALLEQCFGGC*CFSGCW Trigger: CCAGCAGCCGCTGAAGCAGCAGCAGCCGCCGAAGCA...CTGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR TCA 90 bp | GCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCGAGCAGCAGCAGCCCCTGCGTAGCTaGGGCCCAGGATCTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: AKGVTWALWLEAALLEQQQPLRS*GPGSLK Trigger: CTTCAGAGATCCTGGGCCTCAGCTACGCAGGGGCTG...CTGCTGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR GCA 90 bp | GCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCGAGCAGCAGCCAGCTGGTCCATCCTaGTCCATCGCTTGTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: AKGVTWALWLEAALLEQQPAGPS*SIACPP Trigger: GGGAGGACAAGCGATGGAGCAGGATGGACCAGCTGG...CTGCTGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | GGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCGAGCAGCCACATGCTCCTGGCTaGGGAGGCTGGTTGGTGATT | + |
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Preference number: 4 (lower is better) Translates to: GAKGVTWALWLEAALLEQPHAPG*GGWLVI Trigger: AATCACCAACCAGCCTCCCCAGCCAGGAGCATGTGG...CTGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | GGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCGAGCAGCAGTCTGGCAGGCTCTCTAGCTCCTaGTCCTCTGCTCTGCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: GVTWALWLEAALLEQQSGRLSSS*SSALRL Trigger: CAACCGCAGAGCAGAGGACCAGGAGCTAGAGAGCCT...GCCAGACTGCTGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR GCA 90 bp | GGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCGAGCAGCAGTCTGGCGTGGGAACTGGATGCTaGAGTGGGGACTTCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GVTWALWLEAALLEQQSGVGTGC*SGDFFR Trigger: CCTGAAGAAGTCCCCACTGCAGCATCCAGTTCCCAC...GCCAGACTGCTGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | GGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCGAGCAGAACTGGATGCTGCAGTaGGGACTTCTTCAGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GAKGVTWALWLEAALLEQNWMLQ*GLLQAQ Trigger: CTGGGCCTGAAGAAGTCCCCACTGCAGCATCCAGTT...CTGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR GCA 90 bp | AAGGTGAGGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCCTGGAGGGCACTTCTaGTGCTGCGTCTCTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: KVRGKGGNLGSVAGSSPTPGGHF*CCVSVL Trigger: AAGCACAGAGACGCAGCAGCAGAAGTGCCCTCCAGG...AGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCCTCACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | AAGGTGAGGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCCTGGCTGGGGAGGCTaGTTGGTGATTGGGTATTGG | + |
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Preference number: 4 (lower is better) Translates to: KVRGKGGNLGSVAGSSPTPGWGG*LVIGYW Trigger: CCAATACCCAATCACCAACCAGCCTCCCCAGCCAGG...AGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCCTCACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR GCA 90 bp | GCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCGAGCAGCAGTTGGCTTTTCTGGCTTaGTGTTGGGCACTCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: AKGVTWALWLEAALLEQQLAFLA*CWALRP Trigger: AGGCCTGAGTGCCCAACAGCAAGCCAGAAAAGCCAA...CTGCTGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR GCA 90 bp | GAGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGACCCCGCCGCAAAGCCTaGAGCTGGTGGGCCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: EFSAFAQRSEVIAVVPHGPRRKA*SWWATF Trigger: GAAGGTGGCCCACCAGCTGCAGGCTTTGCGGCGGGG...TCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAGAACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | GGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCGAGCAGTCCTTCAGCAGATTCTaGTGTCGCAGGATAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GAKGVTWALWLEAALLEQSFSRF*CRRIER Trigger: CCTCTCTATCCTGCGACACCAGAATCTGCTGAAGGA...CTGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | AAGGTGAGGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCTCTTGGTTAGGCTCTaGAAAGGCCTGAGGCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: KVRGKGGNLGSVAGSSPTLLVRL*KGLRPR Trigger: CCTAGGCCTCAGGCCTTTCCAGAGCCTAACCAAGAG...AGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCCTCACCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | AAGGTGAGGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTAGGCTGGTTGGTGATTaGGTATTGGTGGCTGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: KVRGKGGNLGSVAGSSPTRLVGD*VLVAVS Trigger: GGACACAGCCACCAATACCCAATCACCAACCAGCCT...AGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCCTCACCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR GCA 90 bp | AGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATGCCTGTGGGTCCACATaGTCCTGGCTGGGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SSRLSPKGQKLLQLCPMDACGST*SWLGRL Trigger: CAGCCTCCCCAGCCAGGAGCATGTGGACCCACAGGC...ATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | AAGGTGAGGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCTTGCTTGGCTTTTCTaGCTTGCTGTTGGGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: KVRGKGGNLGSVAGSSPTLAWLF*LAVGHS Trigger: TGAGTGCCCAACAGCAAGCCAGAAAAGCCAAGCAAG...AGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCCTCACCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | GAGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGACCTCTGCTCTGCGGTTaGCGCTGCCCTCCTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: EFSAFAQRSEVIAVVPHGPLLCG*RCPPLP Trigger: AGGAAGAGGAGGGCAGCGCCAACCGCAGAGCAGAGG...TCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAGAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGAATCTGTGCTGACATTCAGGGCTGCCCTGCAGAAGTGTCCAGGGCAAAAGCCTGCAGCTGGTaGGCCACCTTCTCCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: REGICADIQGCPAEVSRAKACSW*ATFSSS Trigger: AGAGCTGGAGAAGGTGGCCCACCAGCTGCAGGCTTT...TGCCCTGGACACTTCTGCAGGGCAGCCCTGAATGTCAGCACAGATTCCTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR TCA 90 bp | CTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATAAGAGGCTCTGGAAAGGCCTaGGGCCTAGGTCCCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LGFRPKVRSYCSCAPWIRGSGKA*GLGPSV Trigger: CACAGAGGGACCTAGGCCTCAGGCCTTTCCAGAGCC...TCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR GCA 90 bp | AGAGAAGGAATCTGTGCTGACATTCAGGGCTGCCCTGCAGAAGTGTCCAGGGCATCAAAGCTGCTGTGTTaGTGCTCCTGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: REGICADIQGCPAEVSRASKLLC*CSCCCC Trigger: GCAGCAGCAGCAGGAGCAGCAACACAGCAGCTTTGA...TGCCCTGGACACTTCTGCAGGGCAGCCCTGAATGTCAGCACAGATTCCTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR GCA 90 bp | CCTGTGTTCAGAGAAGGAATCTGTGCTGACATTCAGGGCTGCCCTGCAGAAGTGGGGCACTTCTGCTGCTaGGTCTCTGTGCTTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: PVFREGICADIQGCPAEVGHFCC*VSVLGI Trigger: GATGCCAAGCACAGAGACGCAGCAGCAGAAGTGCCC...CACTTCTGCAGGGCAGCCCTGAATGTCAGCACAGATTCCTTCTCTGAACACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | CCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATAAGAAGGTGGAAGAGACGGCCCTTCCCGCCTTaGGGGAAGAGACCTTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: PKVRSYCSCAPWIRRWKRRPFPP*GKRPWG Trigger: CCCCCAAGGTCTCTTCCCCCAAGGCGGGAAGGGCCG...TCTCTTCCACCTTCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | CCTGTGTTCAGAGAAGGAATCTGTGCTGACATTCAGGGCTGCCCTGCAGAAGTGAGCTCTTTGGCCAGCTaGTCCATCCTGCTCCATCGC | + |
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Preference number: 4 (lower is better) Translates to: PVFREGICADIQGCPAEVSSLAS*SILLHR Trigger: GCGATGGAGCAGGATGGACCAGCTGGCCAAAGAGCT...CACTTCTGCAGGGCAGCCCTGAATGTCAGCACAGATTCCTTCTCTGAACACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGAATCTGTGCTGACATTCAGGGCTGCCCTGCAGAAGTGTCCAGGGCATGTCCCCTTTTGTCATaGGGCTGTTCACAGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: REGICADIQGCPAEVSRACPLLS*GCSQEG Trigger: CCCTTCCTGTGAACAGCCCCATGACAAAAGGGGACA...TGCCCTGGACACTTCTGCAGGGCAGCCCTGAATGTCAGCACAGATTCCTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | AGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATTCTCACTGTCTCCCGTaGCCTGTGGGTCCACATGCT | + |
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Preference number: 4 (lower is better) Translates to: SSRLSPKGQKLLQLCPMDSHCLP*PVGPHA Trigger: AGCATGTGGACCCACAGGCCACGGGAGACAGTGAGA...ATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | AGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATCCAGCTCTGCCTCGATaGCTGACAGGCTCTCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: SSRLSPKGQKLLQLCPMDPALPR*LTGSLA Trigger: AGCTAGAGAGCCTGTCAGCCATCGAGGCAGAGCTGG...ATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR GCA 90 bp | GAATATCTTAATAGTCAGGAGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTTTCGGCGGCTGCTGCTaGTTCAGCGGCTGCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: EYLNSQEFSAFAQRSEVIFGGCC*FSGCWA Trigger: GGCCCAGCAGCCGCTGAAGCAGCAGCAGCCGCCGAA...AATAACTTCTGACCTTTGGGCGAAAGCCGAGAACTCCTGACTATTAAGATATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | CTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATAAGAAGGTGCTGCTGTCAGCTCTTTaGCCAGCTGGTCCATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSPKGQKLLQLCPMDKKVLLSAL*PAGPSC Trigger: GCAGGATGGACCAGCTGGCCAAAGAGCTGACAGCAG...CACCTTCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | AGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATGGAAGGAGAGCTTCATaGAGCGGTCAGGGTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: SSRLSPKGQKLLQLCPMDGRRAS*SGQGHP Trigger: AGGATGACCCTGACCGCTCCATGAAGCTCTCCTTCC...ATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR TCA 90 bp | GAGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATGGAGAGCCAGGTCTTaGAGTTCCTTCAGCAGATTC | + |
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Preference number: 4 (lower is better) Translates to: EFSAFAQRSEVIAVVPHGWRARS*SSFSRF Trigger: GAATCTGCTGAAGGAACTTCAAGACCTGGCTCTCCA...TCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAGAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR GCA 90 bp | CTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATAAGAAGGTCCCTCTGTGGTTaGCTCAAAGCCATCCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LGFRPKVRSYCSCAPWIRRSLCG*LKAILL Trigger: CAACAGGATGGCTTTGAGGCAACCACAGAGGGACCT...TCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR GCA 90 bp | CTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATAAGAGAAGTGGGAACTGGATaGTGCAGTGGGGACTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LGFRPKVRSYCSCAPWIREVGTG*CSGDFF Trigger: GAAGAAGTCCCCACTGCAGCATCCAGTTCCCACTTC...TCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | CCTGTGTTCAGAGAAGGAATCTGTGCTGACATTCAGGGCTGCCCTGCAGAAGTGTTGGCATCAGGGCTCTaGTTCTCAAACACTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PVFREGICADIQGCPAEVLASGL*FSNTSE Trigger: CTCAGAAGTGTTTGAGAACCAGAGCCCTGATGCCAA...CACTTCTGCAGGGCAGCCCTGAATGTCAGCACAGATTCCTTCTCTGAACACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | TTTATCTGGAATATCTTAATAGTCAGGAGTTCTCGGCTTTCGCCCAAAGGTCAGGGGTCCACATGCTCCTaGCTGGGGAGGCTGGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: FIWNILIVRSSRLSPKGQGSTCS*LGRLVG Trigger: ACCAACCAGCCTCCCCAGCCAGGAGCATGTGGACCC...CTGACCTTTGGGCGAAAGCCGAGAACTCCTGACTATTAAGATATTCCAGATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | TATCTGGAATATCTTAATAGTCAGGAGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTCTCCCGTGGCCTGTaGGTCCACATGCTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLEYLNSQEFSAFAQRSEVSRGL*VHMLLA Trigger: AGCCAGGAGCATGTGGACCCACAGGCCACGGGAGAC...TTCTGACCTTTGGGCGAAAGCCGAGAACTCCTGACTATTAAGATATTCCAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR GCA 90 bp | CCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATAAGAAGGTGGAAGAGATCTTCCTCTTCCTCCTaGTTATGTTCCAGCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PKVRSYCSCAPWIRRWKRSSSSS*LCSSSR Trigger: CCGGGAGCTGGAACATAAGCAGGAGGAAGAGGAAGA...TCTCTTCCACCTTCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | GAATATCTTAATAGTCAGGAGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTCCACACTGTCTTCTCTaGAAGATGGCCTCCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EYLNSQEFSAFAQRSEVIPHCLL*KMASSP Trigger: GGGGCTGGAGGCCATCTTCCAGAGAAGACAGTGTGG...AATAACTTCTGACCTTTGGGCGAAAGCCGAGAACTCCTGACTATTAAGATATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | TATCTGGAATATCTTAATAGTCAGGAGTTCTCGGCTTTCGCCCAAAGGTCAGAACATGGAAGTGGGAACTaGATGCTGCAGTGGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: YLEYLNSQEFSAFAQRSEHGSGN*MLQWGL Trigger: AAGTCCCCACTGCAGCATCCAGTTCCCACTTCCATG...TTCTGACCTTTGGGCGAAAGCCGAGAACTCCTGACTATTAAGATATTCCAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | GAATATCTTAATAGTCAGGAGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTATCCTCTCGTCTCCTTaGAGGGTCTCCAGACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: EYLNSQEFSAFAQRSEVIILSSP*RVSRHS Trigger: TGAGTGTCTGGAGACCCTCCAAGGAGACGAGAGGAT...AATAACTTCTGACCTTTGGGCGAAAGCCGAGAACTCCTGACTATTAAGATATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CCA 90 bp | TTTATCTGGAATATCTTAATAGTCAGGAGTTCTCGGCTTTCGCCCAAAGGTCAGCTTTCTCCTCTTGCTTaGCTTTTCTGGCTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FIWNILIVRSSRLSPKGQLSPLA*LFWLAV Trigger: AACAGCAAGCCAGAAAAGCCAAGCAAGAGGAGAAAG...CTGACCTTTGGGCGAAAGCCGAGAACTCCTGACTATTAAGATATTCCAGATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR TCA 90 bp | TTTATCTGGAATATCTTAATAGTCAGGAGTTCTCGGCTTTCGCCCAAAGGTCAGGTTCTCAAACACTTCTaGGAGTTCATCCTCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIWNILIVRSSRLSPKGQVLKHF*EFILKA Trigger: AGCTTTGAGGATGAACTCTCAGAAGTGTTTGAGAAC...CTGACCTTTGGGCGAAAGCCGAGAACTCCTGACTATTAAGATATTCCAGATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | GAGAAGGTGAGGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTCCGGCCCTTCCCGCCTaGGGGGAAGAGACCTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: EKVRGKGGNLGSVAGSSPPALPA*GEETLG Trigger: CCCCAAGGTCTCTTCCCCCAAGGCGGGAAGGGCCGG...AGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCCTCACCTTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | GCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCGAGCAGCAGTCCTCTGCTCTGCGGTaGGCGCTGCCCTCCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AKGVTWALWLEAALLEQQSSALR*ALPSSS Trigger: GGAAGAGGAGGGCAGCGCCAACCGCAGAGCAGAGGA...CTGCTGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | GCACTCAGGCCTCTCTCACTGTCTCCCGTGGCCTGTGGGTCCACATaGTCCTGGCTGGGGAGGCTGGTTGGTGATTGGGTATTGGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: ALRPLSLSPVACGST*SWLGRLVGDWVLVA Trigger: AGCCACCAATACCCAATCACCAACCAGCCTCCCCAGCCAGGAGCATGTGGACCCACAGGCCACGGGAGACAGTGAGAGAGGCCTGAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CCA 90 bp | AGGCCTCTCTCACTGTCTCCCGTGGCCTGTGGGTCCACATGCTCCTaGCTGGGGAGGCTGGTTGGTGATTGGGTATTGGTGGCTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPLSLSPVACGSTCS*LGRLVGDWVLVAVS Trigger: GGACACAGCCACCAATACCCAATCACCAACCAGCCTCCCCAGCCAGGAGCATGTGGACCCACAGGCCACGGGAGACAGTGAGAGAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | GAGAGTTCATCCTCAAAGCTGCTGTGTTGCTGCTCCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTTCGGCGGCTGCTGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESSSSKLLCCCSCCC*CCCCCCCFGGCCCF Trigger: GAAGCAGCAGCAGCCGCCGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGCAACACAGCAGCTTTGAGGATGAACTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | TCTGAGAGTTCATCCTCAAAGCTGCTGTGTTGCTGCTCCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTTCGGCGGCTGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SESSSSKLLCCCSCC*CCCCCCCCFGGCCC Trigger: GCAGCAGCAGCCGCCGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGCAACACAGCAGCTTTGAGGATGAACTCTCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | CTTCATGGAGCGGTCAGGGTCATCCTCGCCCTCCAGCCGCTTCTCTaGTGTCAGCTCTTTGGCCAGCTGGTCCATCCTGCTCCATCGCTT | + |
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Preference number: 5 (lower is better) Translates to: LHGAVRVILALQPLL*CQLFGQLVHPAPSL Trigger: AAGCGATGGAGCAGGATGGACCAGCTGGCCAAAGAGCTGACAGCAGAGAAGCGGCTGGAGGGCGAGGATGACCCTGACCGCTCCATGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | GAGAAGGTGAGGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTAGGAAGGGCAAAAACTaGCCCGGCGCACAGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: EKVRGKGGNLGSVAGSSPRKGKN*PGAQQK Trigger: CTTCTGCTGTGCGCCGGGCAAGTTTTTGCCCTTCCT...AGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCCTCACCTTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | GGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCGAGCAGCAGTCTGGCCCTTGGTGTCCCCTTTaGTCATGGGGCTGTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GVTWALWLEAALLEQQSGPWCPL*SWGCSQ Trigger: CTGTGAACAGCCCCATGACAAAAGGGGACACCAAGG...GCCAGACTGCTGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | ACTTCTGAGAGTTCATCCTCAAAGCTGCTGTGTTGCTGCTCCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCGGCGGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: TSESSSSKLLCCCSC*CCCCCCCCCFGGCC Trigger: GCAGCAGCCGCCGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGCAACACAGCAGCTTTGAGGATGAACTCTCAGAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | TCCCATTCTCTGGACAGACGCTCCTCCTCCTCTTCCTCTTCCTCCTaGTTATGTTCCAGCTCCCGGCCCTTCCCGCCTTGGGGGAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SHSLDRRSSSSSSSS*LCSSSRPFPPWGKR Trigger: TCTCTTCCCCCAAGGCGGGAAGGGCCGGGAGCTGGAACATAAGCAGGAGGAAGAGGAAGAGGAGGAGGAGCGTCTGTCCAGAGAATGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | CCAGCCGCTTCTCTGCTGTCAGCTCTTTGGCCAGCTGGTCCATCCTaGTCCATCGCTTGTCCTCCCATTCTCTGGACAGACGCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PAASLLSALWPAGPS*SIACPPILWTDAPP Trigger: AGGAGGAGCGTCTGTCCAGAGAATGGGAGGACAAGCGATGGAGCAGGATGGACCAGCTGGCCAAAGAGCTGACAGCAGAGAAGCGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | AAGGTGAGGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTGATCCTCTCGTCTCCTaGGAGGGTCTCCAGACACTC | + |
|
Preference number: 5 (lower is better) Translates to: KVRGKGGNLGSVAGSSPTDPLVS*EGLQTL Trigger: GAGTGTCTGGAGACCCTCCAAGGAGACGAGAGGATC...AGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCCTCACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | GAGAAGGTGAGGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTTTTTCTGGCTTGCTGTaGGGCACTCAGGCCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EKVRGKGGNLGSVAGSSPFSGLL*GTQASL Trigger: GAGAGAGGCCTGAGTGCCCAACAGCAAGCCAGAAAA...AGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCCTCACCTTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | AAGGTGAGGGGCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCTTGGCTTTTCTGGCTaGCTGTTGGGCACTCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: KVRGKGGNLGSVAGSSPTLGFSG*LLGTQA Trigger: GGCCTGAGTGCCCAACAGCAAGCCAGAAAAGCCAAG...AGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGCCCCTCACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS TCA 90 bp | AGCGGCTGCTGGGCCCGCTCCTTGGCACCTTGGAGAGCCAGGTCTTaGAGTTCCTTCAGCAGATTCTGGTGTCGCAGGATAGAGAGGATC | + |
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Preference number: 5 (lower is better) Translates to: SGCWARSLAPWRARS*SSFSRFWCRRIERI Trigger: GATCCTCTCTATCCTGCGACACCAGAATCTGCTGAAGGAACTTCAAGACCTGGCTCTCCAAGGTGCCAAGGAGCGGGCCCAGCAGCCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | AACACTTCTGAGAGTTCATCCTCAAAGCTGCTGTGTTGCTGCTCCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCGGCGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: NTSESSSSKLLCCCS*CCCCCCCCCCFGGC Trigger: GCAGCCGCCGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGCAACACAGCAGCTTTGAGGATGAACTCTCAGAAGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | CTGACAGGCTCTCTAGCTCCTGGTCCTCTGCTCTGCGGTTGGCGCTaGCCTCCTCTTCCTTCTTTTCCTCAAAGTCACTTCGGGCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LTGSLAPGPLLCGWR*PPLPSFPQSHFGPP Trigger: TGGAGGCCCGAAGTGACTTTGAGGAAAAGAAGGAAGAGGAGGGCAGCGCCAACCGCAGAGCAGAGGACCAGGAGCTAGAGAGCCTGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CCA 90 bp | AGCAGATTCTGGTGTCGCAGGATAGAGAGGATCCTCTCGTCTCCTTaGAGGGTCTCCAGACACTCAGGGCTGACAGGCATGGGGCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: SRFWCRRIERILSSP*RVSRHSGLTGMGLG Trigger: ACCCAGCCCCATGCCTGTCAGCCCTGAGTGTCTGGAGACCCTCCAAGGAGACGAGAGGATCCTCTCTATCCTGCGACACCAGAATCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CCA 90 bp | TCCTCCTCTTCTTTCTCCTCTTGCTTGGCTTTTCTGGCTTGCTGTTaGGCACTCAGGCCTCTCTCACTGTCTCCCGTGGCCTGTGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: SSSSFSSCLAFLACC*ALRPLSLSPVACGS Trigger: GGACCCACAGGCCACGGGAGACAGTGAGAGAGGCCTGAGTGCCCAACAGCAAGCCAGAAAAGCCAAGCAAGAGGAGAAAGAAGAGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | AGAGAAGGAATCTGTGCTGACATTCAGGGCTGCCCTGCAGAAGTGTCCAGGGCAGGCTGGGGAGGCTGGTaGGTGATTGGGTATTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: REGICADIQGCPAEVSRAGWGGW*VIGYWW Trigger: CCACCAATACCCAATCACCAACCAGCCTCCCCAGCC...TGCCCTGGACACTTCTGCAGGGCAGCCCTGAATGTCAGCACAGATTCCTTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS TCA 90 bp | CTGTCTCCCATCATGGGGGACTCTTGGTTAGGCTCTGGAAAGGCCTaGGGCCTAGGTCCCTCTGTGGTTGCCTCAAAGCCATCCTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSPIMGDSWLGSGKA*GLGPSVVASKPSCC Trigger: ACAACAGGATGGCTTTGAGGCAACCACAGAGGGACCTAGGCCTCAGGCCTTTCCAGAGCCTAACCAAGAGTCCCCCATGATGGGAGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | GCAAAGGGGGTAACCTGGGCTCTGTGGCTGGAAGCAGCCCTACTCGAGCAGCAGTTGGAGAGCCAGGTCTaGAAGTTCCTTCAGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: AKGVTWALWLEAALLEQQLESQV*KFLQQI Trigger: AATCTGCTGAAGGAACTTCAAGACCTGGCTCTCCAA...CTGCTGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | TTCTCAAACACTTCTGAGAGTTCATCCTCAAAGCTGCTGTGTTGCTaGTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSNTSESSSSKLLCC*SCCCCCCCCCCCFG Trigger: GCCGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGCAACACAGCAGCTTTGAGGATGAACTCTCAGAAGTGTTTGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | CAGGGCTCTGGTTCTCAAACACTTCTGAGAGTTCATCCTCAAAGCTaGTGTGTTGCTGCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QGSGSQTLLRVHPQS*CVAAPAAAAAAAAA Trigger: AGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGCAACACAGCAGCTTTGAGGATGAACTCTCAGAAGTGTTTGAGAACCAGAGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | TTTCTGGATCGCTTTGTAGCCTGCATGGAAGTGGGAACTGGATGCTaGAGTGGGGACTTCTTCAGGCCCAGCCTTCTCTCTAGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLDRFVACMEVGTGC*SGDFFRPSLLSSHS Trigger: GCTGTGGCTAGAGAGAAGGCTGGGCCTGAAGAAGTCCCCACTGCAGCATCCAGTTCCCACTTCCATGCAGGCTACAAAGCGATCCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | TGGTTCTCAAACACTTCTGAGAGTTCATCCTCAAAGCTGCTGTGTTaGTGCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WFSNTSESSSSKLLC*CSCCCCCCCCCCCF Trigger: GAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGCAACACAGCAGCTTTGAGGATGAACTCTCAGAAGTGTTTGAGAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | TCTCTAGCCACAGCCTCCTCTTCCTCCTCCTCTTCTTTCTCCTCTTaGTTGGCTTTTCTGGCTTGCTGTTGGGCACTCAGGCCTCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLATASSSSSSSFSS*LAFLACCWALRPLS Trigger: TGAGAGAGGCCTGAGTGCCCAACAGCAAGCCAGAAAAGCCAAGCAAGAGGAGAAAGAAGAGGAGGAGGAAGAGGAGGCTGTGGCTAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | CTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATAAGAAGGTGGGCATGGGGCTGGGTTaGGACAGCGAGTCGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSPKGQKLLQLCPMDKKVGMGLG*DSESEM Trigger: CATCTCCGACTCGCTGTCCAAACCCAGCCCCATGCC...CACCTTCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | CTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATAAGACCGCTCCTTGGCACCTaGGAGAGCCAGGTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGFRPKVRSYCSCAPWIRPLLGT*ESQVLK Trigger: CTTCAAGACCTGGCTCTCCAAGGTGCCAAGGAGCGG...TCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | AGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATGCTGCGTCTCTGTGCTaGGCATCAGGGCTCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSRLSPKGQKLLQLCPMDAASLC*ASGLWF Trigger: GAACCAGAGCCCTGATGCCAAGCACAGAGACGCAGC...ATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | TTCTCCATAGTGTCCCTGGAGGGCACTTCTGCTGCTGCGTCTCTGTaGTTGGCATCAGGGCTCTGGTTCTCAAACACTTCTGAGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSIVSLEGTSAAASL*LASGLWFSNTSESS Trigger: TGAACTCTCAGAAGTGTTTGAGAACCAGAGCCCTGATGCCAAGCACAGAGACGCAGCAGCAGAAGTGCCCTCCAGGGACACTATGGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | CTGAGAGTCCGACTGACCATCATCTTTCTGGATCGCTTTGTAGCCTaGATGGAAGTGGGAACTGGATGCTGCAGTGGGGACTTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRVRLTIIFLDRFVA*MEVGTGCCSGDFFR Trigger: CCTGAAGAAGTCCCCACTGCAGCATCCAGTTCCCACTTCCATGCAGGCTACAAAGCGATCCAGAAAGATGATGGTCAGTCGGACTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CCA 90 bp | GAGGGCACTTCTGCTGCTGCGTCTCTGTGCTTGGCATCAGGGCTCTaGTTCTCAAACACTTCTGAGAGTTCATCCTCAAAGCTGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: EGTSAAASLCLASGL*FSNTSESSSSKLLC Trigger: ACACAGCAGCTTTGAGGATGAACTCTCAGAAGTGTTTGAGAACCAGAGCCCTGATGCCAAGCACAGAGACGCAGCAGCAGAAGTGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 90 bp | TTGGTTAGGCTCTGGAAAGGCCTGAGGCCTAGGTCCCTCTGTGGTTaGCTCAAAGCCATCCTGTTGTCCCTTGTCAGAATCCTTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVRLWKGLRPRSLCG*LKAILLSLVRILSL Trigger: AAGAGAAAGGATTCTGACAAGGGACAACAGGATGGCTTTGAGGCAACCACAGAGGGACCTAGGCCTCAGGCCTTTCCAGAGCCTAACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | CCTGTGTTCAGAGAAGGAATCTGTGCTGACATTCAGGGCTGCCCTGCAGAAGTGACGCACTTCATCACCTaGGTGTCCCCTTTTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: PVFREGICADIQGCPAEVTHFIT*VSPFVM Trigger: CATGACAAAAGGGGACACCAAGGTGATGAAGTGCGT...CACTTCTGCAGGGCAGCCCTGAATGTCAGCACAGATTCCTTCTCTGAACACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | AGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATCTCAAAGCCATCCTGTaGTCCCTTGTCAGAATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSRLSPKGQKLLQLCPMDLKAIL*SLVRIL Trigger: AAGGATTCTGACAAGGGACAACAGGATGGCTTTGAG...ATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGGCGAAAGCCGAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | TTTATCTGGAATATCTTAATAGTCAGGAGTTCTCGGCTTTCGCCCAAAGGTCAGGTTGGTGATTGGGTATaGGTGGCTGTGTCCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FIWNILIVRSSRLSPKGQVGDWV*VAVSSP Trigger: TGGGGAGGACACAGCCACCAATACCCAATCACCAAC...CTGACCTTTGGGCGAAAGCCGAGAACTCCTGACTATTAAGATATTCCAGATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | CCCAAAGGTCAGAAGTTATTGCAGTTGTGCCCCATGGATAAGAAGGTGGAAGAGTCTTTCTCCTCTTGCTaGGCTTTTCTGGCTTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: PKGQKLLQLCPMDKKVEESFSSC*AFLACC Trigger: ACAGCAAGCCAGAAAAGCCAAGCAAGAGGAGAAAGA...CTCTTCCACCTTCTTATCCATGGGGCACAACTGCAATAACTTCTGACCTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS-3UTR CAA 90 bp | GAATATCTTAATAGTCAGGAGTTCTCGGCTTTCGCCCAAAGGTCAGAAGTTATTTCTGCTGTCAGCTCTTaGGCCAGCTGGTCCATCCTG | + |
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Preference number: 5 (lower is better) Translates to: EYLNSQEFSAFAQRSEVISAVSS*ASWSIL Trigger: CAGGATGGACCAGCTGGCCAAAGAGCTGACAGCAGA...AATAACTTCTGACCTTTGGGCGAAAGCCGAGAACTCCTGACTATTAAGATATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 90 bp | CGGCTGCTGCTGCTTCAGCGGCTGCTGGGCCCGCTCCTTGGCACCTaGGAGAGCCAGGTCTTGAAGTTCCTTCAGCAGATTCTGGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: RLLLLQRLLGPLLGT*ESQVLKFLQQILVS Trigger: CGACACCAGAATCTGCTGAAGGAACTTCAAGACCTGGCTCTCCAAGGTGCCAAGGAGCGGGCCCAGCAGCCGCTGAAGCAGCAGCAGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CCA 72 bp | GCTGCTGCTGCTTCAGCGGCTGCTGGGCCCGCTCCTTaGCACCTTGGAGAGCCAGGTCTTGAAGTTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: AAAASAAAGPAP*HLGEPGLEVPS Trigger: TGAAGGAACTTCAAGACCTGGCTCTCCAAGGTGCCAAGGAGCGGGCCCAGCAGCCGCTGAAGCAGCAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CCA 72 bp | CCTCGCCCTCCAGCCGCTTCTCTGCTGTCAGCTCTTTaGCCAGCTGGTCCATCCTGCTCCATCGCTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: PRPPAASLLSAL*PAGPSCSIACP Trigger: AGGACAAGCGATGGAGCAGGATGGACCAGCTGGCCAAAGAGCTGACAGCAGAGAAGCGGCTGGAGGGCGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 72 bp | TCCTCGCCCTCCAGCCGCTTCTCTGCTGTCAGCTCTTaGGCCAGCTGGTCCATCCTGCTCCATCGCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSPSSRFSAVSS*ASWSILLHRLS Trigger: GGACAAGCGATGGAGCAGGATGGACCAGCTGGCCAAAGAGCTGACAGCAGAGAAGCGGCTGGAGGGCGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CCA 72 bp | TCACTGTCTCCCGTGGCCTGTGGGTCCACATGCTCCTaGCTGGGGAGGCTGGTTGGTGATTGGGTATTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SLSPVACGSTCS*LGRLVGDWVLV Trigger: CACCAATACCCAATCACCAACCAGCCTCCCCAGCCAGGAGCATGTGGACCCACAGGCCACGGGAGACAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 72 bp | CCCAGGGGACTCACTGTCTCCCATCATGGGGGACTCTaGGTTAGGCTCTGGAAAGGCCTGAGGCCTAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PRGLTVSHHGGL*VRLWKGLRPRS Trigger: GGACCTAGGCCTCAGGCCTTTCCAGAGCCTAACCAAGAGTCCCCCATGATGGGAGACAGTGAGTCCCCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 90 bp | CAGCAGATTCTGGTGTCGCAGGATAGAGAGGATCCTCTCGTCTCCTaGGAGGGTCTCCAGACACTCAGGGCTGACAGGCATGGGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: QQILVSQDREDPLVS*EGLQTLRADRHGAG Trigger: CCCAGCCCCATGCCTGTCAGCCCTGAGTGTCTGGAGACCCTCCAAGGAGACGAGAGGATCCTCTCTATCCTGCGACACCAGAATCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS TCA 72 bp | CAGGCATGGGGCTGGGTTTGGACAGCGAGTCGGAGATaGCTTCCAGGACGCACTTCATCACCTTGGTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: QAWGWVWTASRR*LPGRTSSPWCP Trigger: GGGACACCAAGGTGATGAAGTGCGTCCTGGAAGTCATCTCCGACTCGCTGTCCAAACCCAGCCCCATGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 72 bp | CTGCTTCAGCGGCTGCTGGGCCCGCTCCTTGGCACCTaGGAGAGCCAGGTCTTGAAGTTCCTTCAGCAGATT | + |
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Preference number: 6 (lower is better) Translates to: LLQRLLGPLLGT*ESQVLKFLQQI Trigger: AATCTGCTGAAGGAACTTCAAGACCTGGCTCTCCAAGGTGCCAAGGAGCGGGCCCAGCAGCCGCTGAAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 90 bp | CTCCTCCTCTTCTTTCTCCTCTTGCTTGGCTTTTCTGGCTTGCTGTaGGGCACTCAGGCCTCTCTCACTGTCTCCCGTGGCCTGTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LLLFFLLLLGFSGLL*GTQASLTVSRGLWV Trigger: GACCCACAGGCCACGGGAGACAGTGAGAGAGGCCTGAGTGCCCAACAGCAAGCCAGAAAAGCCAAGCAAGAGGAGAAAGAAGAGGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 72 bp | GAGAGTTCATCCTCAAAGCTGCTGTGTTGCTGCTCCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ESSSSKLLCCCS*CCCCCCCCCCF Trigger: GAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGCAACACAGCAGCTTTGAGGATGAACTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 72 bp | CTTCTCCATAGTGTCCCTGGAGGGCACTTCTGCTGCTaGGTCTCTGTGCTTGGCATCAGGGCTCTGGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LLHSVPGGHFCC*VSVLGIRALVL Trigger: GAGAACCAGAGCCCTGATGCCAAGCACAGAGACGCAGCAGCAGAAGTGCCCTCCAGGGACACTATGGAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CCA 72 bp | TGGTGTCGCAGGATAGAGAGGATCCTCTCGTCTCCTTaGAGGGTCTCCAGACACTCAGGGCTGACAGGCATG | + |
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Preference number: 6 (lower is better) Translates to: WCRRIERILSSP*RVSRHSGLTGM Trigger: CATGCCTGTCAGCCCTGAGTGTCTGGAGACCCTCCAAGGAGACGAGAGGATCCTCTCTATCCTGCGACACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CCA 72 bp | ACTGTCTCCCATCATGGGGGACTCTTGGTTAGGCTCTaGAAAGGCCTGAGGCCTAGGTCCCTCTGTGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: TVSHHGGLLVRL*KGLRPRSLCGC Trigger: GCAACCACAGAGGGACCTAGGCCTCAGGCCTTTCCAGAGCCTAACCAAGAGTCCCCCATGATGGGAGACAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CCA 72 bp | GGTCCATCCTGCTCCATCGCTTGTCCTCCCATTCTCTaGACAGACGCTCCTCCTCCTCTTCCTCTTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GPSCSIACPPIL*TDAPPPLPLPP Trigger: AGGAGGAAGAGGAAGAGGAGGAGGAGCGTCTGTCCAGAGAATGGGAGGACAAGCGATGGAGCAGGATGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 72 bp | CTGGTGTCGCAGGATAGAGAGGATCCTCTCGTCTCCTaGGAGGGTCTCCAGACACTCAGGGCTGACAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LVSQDREDPLVS*EGLQTLRADRH Trigger: ATGCCTGTCAGCCCTGAGTGTCTGGAGACCCTCCAAGGAGACGAGAGGATCCTCTCTATCCTGCGACACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS TCA 72 bp | TGGGCCCGCTCCTTGGCACCTTGGAGAGCCAGGTCTTaGAGTTCCTTCAGCAGATTCTGGTGTCGCAGGATA | + |
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Preference number: 6 (lower is better) Translates to: WARSLAPWRARS*SSFSRFWCRRI Trigger: TATCCTGCGACACCAGAATCTGCTGAAGGAACTTCAAGACCTGGCTCTCCAAGGTGCCAAGGAGCGGGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS TCA 72 bp | ATCATGGGGGACTCTTGGTTAGGCTCTGGAAAGGCCTaGGGCCTAGGTCCCTCTGTGGTTGCCTCAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: IMGDSWLGSGKA*GLGPSVVASKP Trigger: TGGCTTTGAGGCAACCACAGAGGGACCTAGGCCTCAGGCCTTTCCAGAGCCTAACCAAGAGTCCCCCATGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 72 bp | ACTTCTGAGAGTTCATCCTCAAAGCTGCTGTGTTGCTaGTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TSESSSSKLLCC*SCCCCCCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGCAACACAGCAGCTTTGAGGATGAACTCTCAGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 72 bp | GTGTCCCTGGAGGGCACTTCTGCTGCTGCGTCTCTGTaGTTGGCATCAGGGCTCTGGTTCTCAAACACTTCT | + |
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Preference number: 6 (lower is better) Translates to: VSLEGTSAAASL*LASGLWFSNTS Trigger: AGAAGTGTTTGAGAACCAGAGCCCTGATGCCAAGCACAGAGACGCAGCAGCAGAAGTGCCCTCCAGGGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 72 bp | TCTCTTCTCCATAGTGTCCCTGGAGGGCACTTCTGCTaGTGCGTCTCTGTGCTTGGCATCAGGGCTCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: SLLHSVPGGHFC*CVSVLGIRALV Trigger: AACCAGAGCCCTGATGCCAAGCACAGAGACGCAGCAGCAGAAGTGCCCTCCAGGGACACTATGGAGAAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 72 bp | CTTTCTCTTCTCCATAGTGTCCCTGGAGGGCACTTCTaGTGCTGCGTCTCTGTGCTTGGCATCAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LSLLHSVPGGHF*CCVSVLGIRAL Trigger: CAGAGCCCTGATGCCAAGCACAGAGACGCAGCAGCAGAAGTGCCCTCCAGGGACACTATGGAGAAGAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 72 bp | TCTCTGCTGTCAGCTCTTTGGCCAGCTGGTCCATCCTaGTCCATCGCTTGTCCTCCCATTCTCTGGACAGAC | + |
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Preference number: 6 (lower is better) Translates to: SLLSALWPAGPS*SIACPPILWTD Trigger: GTCTGTCCAGAGAATGGGAGGACAAGCGATGGAGCAGGATGGACCAGCTGGCCAAAGAGCTGACAGCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CCA 72 bp | CCCTGGAGGGCACTTCTGCTGCTGCGTCTCTGTGCTTaGCATCAGGGCTCTGGTTCTCAAACACTTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PWRALLLLRLCA*HQGSGSQTLLR Trigger: TCTCAGAAGTGTTTGAGAACCAGAGCCCTGATGCCAAGCACAGAGACGCAGCAGCAGAAGTGCCCTCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CCA 72 bp | TCTGGATCGCTTTGTAGCCTGCATGGAAGTGGGAACTaGATGCTGCAGTGGGGACTTCTTCAGGCCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SGSLCSLHGSGN*MLQWGLLQAQP Trigger: AGGCTGGGCCTGAAGAAGTCCCCACTGCAGCATCCAGTTCCCACTTCCATGCAGGCTACAAAGCGATCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 72 bp | TCCCTGGAGGGCACTTCTGCTGCTGCGTCTCTGTGCTaGGCATCAGGGCTCTGGTTCTCAAACACTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SLEGTSAAASLC*ASGLWFSNTSE Trigger: CTCAGAAGTGTTTGAGAACCAGAGCCCTGATGCCAAGCACAGAGACGCAGCAGCAGAAGTGCCCTCCAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 90 bp | CTAGCCACAGCCTCCTCTTCCTCCTCCTCTTCTTTCTCCTCTTGCTaGGCTTTTCTGGCTTGCTGTTGGGCACTCAGGCCTCTCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: LATASSSSSSSFSSC*AFLACCWALRPLSL Trigger: CAGTGAGAGAGGCCTGAGTGCCCAACAGCAAGCCAGAAAAGCCAAGCAAGAGGAGAAAGAAGAGGAGGAGGAAGAGGAGGCTGTGGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 72 bp | AACACTTCTGAGAGTTCATCCTCAAAGCTGCTGTGTTaGTGCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: NTSESSSSKLLC*CSCCCCCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGCAACACAGCAGCTTTGAGGATGAACTCTCAGAAGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 72 bp | CTCTGGAAAGGCCTGAGGCCTAGGTCCCTCTGTGGTTaGCTCAAAGCCATCCTGTTGTCCCTTGTCAGAATC | + |
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Preference number: 6 (lower is better) Translates to: LWKGLRPRSLCG*LKAILLSLVRI Trigger: GATTCTGACAAGGGACAACAGGATGGCTTTGAGGCAACCACAGAGGGACCTAGGCCTCAGGCCTTTCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CCA 72 bp | CCTCCTCTTCCTCCTCCTCTTCTTTCTCCTCTTGCTTaGCTTTTCTGGCTTGCTGTTGGGCACTCAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PPLPPPLLSPLA*LFWLAVGHSGL Trigger: GAGGCCTGAGTGCCCAACAGCAAGCCAGAAAAGCCAAGCAAGAGGAGAAAGAAGAGGAGGAGGAAGAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 72 bp | TTCTTTCTCCTCTTGCTTGGCTTTTCTGGCTTGCTGTaGGGCACTCAGGCCTCTCTCACTGTCTCCCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: FFLLLLGFSGLL*GTQASLTVSRG Trigger: GCCACGGGAGACAGTGAGAGAGGCCTGAGTGCCCAACAGCAAGCCAGAAAAGCCAAGCAAGAGGAGAAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 72 bp | GCCTCCTCTTCCTCCTCCTCTTCTTTCTCCTCTTGCTaGGCTTTTCTGGCTTGCTGTTGGGCACTCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: ASSSSSSSFSSC*AFLACCWALRP Trigger: AGGCCTGAGTGCCCAACAGCAAGCCAGAAAAGCCAAGCAAGAGGAGAAAGAAGAGGAGGAGGAAGAGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 90 bp | TCCATAGTGTCCCTGGAGGGCACTTCTGCTGCTGCGTCTCTGTGCTaGGCATCAGGGCTCTGGTTCTCAAACACTTCTGAGAGTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: SIVSLEGTSAAASLC*ASGLWFSNTSESSS Trigger: GGATGAACTCTCAGAAGTGTTTGAGAACCAGAGCCCTGATGCCAAGCACAGAGACGCAGCAGCAGAAGTGCCCTCCAGGGACACTATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 90 bp | GGCCTGAGGCCTAGGTCCCTCTGTGGTTGCCTCAAAGCCATCCTGTaGTCCCTTGTCAGAATCCTTTCTCTTCTCCATAGTGTCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GLRPRSLCGCLKAIL*SLVRILSLLHSVPG Trigger: TCCAGGGACACTATGGAGAAGAGAAAGGATTCTGACAAGGGACAACAGGATGGCTTTGAGGCAACCACAGAGGGACCTAGGCCTCAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 72 bp | ACAGCCTCCTCTTCCTCCTCCTCTTCTTTCTCCTCTTaGTTGGCTTTTCTGGCTTGCTGTTGGGCACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TASSSSSSSFSS*LAFLACCWALR Trigger: CCTGAGTGCCCAACAGCAAGCCAGAAAAGCCAAGCAAGAGGAGAAAGAAGAGGAGGAGGAAGAGGAGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 72 bp | CGACTGACCATCATCTTTCTGGATCGCTTTGTAGCCTaGATGGAAGTGGGAACTGGATGCTGCAGTGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: RLTIIFLDRFVA*MEVGTGCCSGD Trigger: GTCCCCACTGCAGCATCCAGTTCCCACTTCCATGCAGGCTACAAAGCGATCCAGAAAGATGATGGTCAGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS GCA 72 bp | AGCTTCGGAAGCCTCTGTCTTTCCATCTCCATCCACTaGCTGAGAGTCCGACTGACCATCATCTTTCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: SFGSLCLSISIH*LRVRLTIIFLD Trigger: ATCCAGAAAGATGATGGTCAGTCGGACTCTCAGGCAGTGGATGGAGATGGAAAGACAGAGGCTTCCGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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| CDS CAA 72 bp | CCTAGGTCCCTCTGTGGTTGCCTCAAAGCCATCCTGTaGTCCCTTGTCAGAATCCTTTCTCTTCTCCATAGT | + |
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Preference number: 6 (lower is better) Translates to: PRSLCGCLKAIL*SLVRILSLLHS Trigger: ACTATGGAGAAGAGAAAGGATTCTGACAAGGGACAACAGGATGGCTTTGAGGCAACCACAGAGGGACCTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021610.7 |
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