Pregenerated sensors for CHEK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032113Ensembl transcript IDs: ENSMUST00000034625.12, ENSMUST00000172702.9, ENSMUST00000172742.2, ENSMUST00000173963.9
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTTTTATAATTGGTCAAGCCCTTGTGCAGCACATATACCCAAACTaGAAATACAGTACATACATTAACATACACATTTTTGTGGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: SFIIGQALVQHIYPN*KYSTYINIHIFVAG Trigger: GCCAGCCACAAAAATGTGTATGTTAATGTATGTACTGTATTTTCAGTTTGGGTATATGTGCTGCACAAGGGCTTGACCAATTATAAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR TCA 90 bp | AGTATCAATTACATGGACAAAAGGTGGCAACAATCCAAATATGCATaGTCATATGAAAGAGTATACATACACACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: SINYMDKRWQQSKYA*SYERVYIHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTATGTATACTCTTTCATATGATCATGCATATTTGGATTGTTGCCACCTTTTGTCCATGTAATTGATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTACATACACATTTTTGTaGCTGGCCTCATTCATGAAC | + |
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Preference number: 2 (lower is better) Translates to: TRIRSTPAFPYSRPFSVSTYTFL*LASFMN Trigger: GTTCATGAATGAGGCCAGCCACAAAAATGTGTATGT...ACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGATCCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR TCA 90 bp | GTCAAGTTGGGCCAGGCATGCTATGTAATCACAGTATTTGGGAGACAGAGTCAGGTTGGAATTTATCTATaGAAAGGAATACAGGACCCC | + |
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Preference number: 2 (lower is better) Translates to: VKLGQACYVITVFGRQSQVGIYL*KGIQDP Trigger: GGGGTCCTGTATTCCTTTTCATAGATAAATTCCAAC...CTGACTCTGTCTCCCAAATACTGTGATTACATAGCATGCCTGGCCCAACTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR GCA 90 bp | ACAAGGATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTACAGTAGTATTTGTATaGCAAACACTACAAATCGGA | + |
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Preference number: 2 (lower is better) Translates to: TRIRSTPAFPYSRPFSVSTVVFV*QTLQIG Trigger: TCCGATTTGTAGTGTTTGGCATACAAATACTACTGT...ACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGATCCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR TCA 90 bp | ACCACAGTGGGACTACAAGTGGGAAACAGGAGACTGAATAGAGTTAGGTTCAAGGTTGGAATTTATCTATaGAAAGGAATACAGGACCCC | + |
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Preference number: 2 (lower is better) Translates to: TTVGLQVGNRRLNRVRFKVGIYL*KGIQDP Trigger: GGGGTCCTGTATTCCTTTTCATAGATAAATTCCAAC...CTTGAACCTAACTCTATTCAGTCTCCTGTTTCCCACTTGTAGTCCCACTGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR CCA 90 bp | ACCACAGTGGGACTACAAGTGGGAAACAGGAGACTGAATAGAGTTAGGTTCAAGAAATCGGAAGATGTTTaGGTAATGGGAAGAGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: TTVGLQVGNRRLNRVRFKKSEDV*VMGREL Trigger: GAGTTCTCTTCCCATTACCCAAACATCTTCCGATTT...CTTGAACCTAACTCTATTCAGTCTCCTGTTTCCCACTTGTAGTCCCACTGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR TCA 90 bp | TGTTCACACCAGTATCAATTACATGGACAAAAGGTGGCAACAATCCAAATATGCGGAGAGTTAAGTGGGTaGCAACAGCATATACCAACA | + |
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Preference number: 2 (lower is better) Translates to: CSHQYQLHGQKVATIQICGELSG*QQHIPT Trigger: TGTTGGTATATGCTGTTGTCACCCACTTAACTCTCC...GCATATTTGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGGTGTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTCACACCAGTATCAATTACATGGACAAAAGGTGGCAACAATCCAAATATGCGATGGGAGAGTTAAGTaGGTGACAACAGCATATACC | + |
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Preference number: 2 (lower is better) Translates to: CSHQYQLHGQKVATIQICDGRVK*VTTAYT Trigger: GGTATATGCTGTTGTCACCCACTTAACTCTCCCATC...GCATATTTGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGGTGTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGTATCAATTACATGGACAAAAGGTGGCAACAATCCAAATATGCATGATCATTGGGAAACAGGAGACTaGATAGAGTTAGGTTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: PVSITWTKGGNNPNMHDHWETGD*IELGSS Trigger: ACTTGAACCTAACTCTATTCAGTCTCCTGTTTCCCA...ATGATCATGCATATTTGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR GCA 90 bp | CAGTATCAATTACATGGACAAAAGGTGGCAACAATCCAAATATGCATGATCATATTGGTCAAGCCCTTGTaGAGCACATATACCCAAACT | + |
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Preference number: 2 (lower is better) Translates to: QYQLHGQKVATIQICMIILVKPL*STYTQT Trigger: AGTTTGGGTATATGTGCTGCACAAGGGCTTGACCAA...TATGATCATGCATATTTGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTCACACCAGTATCAATTACATGGACAAAAGGTGGCAACAATCCAAATATGCCATGGGTATAAAAGCTaGCAAACTCAAGTATCCCAT | + |
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Preference number: 2 (lower is better) Translates to: CSHQYQLHGQKVATIQICHGYKS*QTQVSH Trigger: ATGGGATACTTGAGTTTGCCAGCTTTTATACCCATG...GCATATTTGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGGTGTGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR CAA 90 bp | CTACTACATGGGTATAAAAGCTGGCAAACTCAAGTATCCCATAACTaGGTTTCAAATCCAGACAATTTAAAGACAGCTGGAGAAATACCT | + |
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Preference number: 2 (lower is better) Translates to: LLHGYKSWQTQVSHN*VSNPDNLKTAGEIP Trigger: AGGTATTTCTCCAGCTGTCTTTAAATTGTCTGGATTTGAAACCAAGTTATGGGATACTTGAGTTTGCCAGCTTTTATACCCATGTAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR CAA 90 bp | TATACCCAAACTGAAAATACAGTACATACATTAACATACACATTTTaGTGGCTGGCCTCATTCATGAACCAATCAACTGTATATGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: YTQTENTVHTLTYTF*WLASFMNQSTVYGL Trigger: CAGACCATATACAGTTGATTGGTTCATGAATGAGGCCAGCCACAAAAATGTGTATGTTAATGTATGTACTGTATTTTCAGTTTGGGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGTATCAATTACATGGACAAAAGGTGGCAACAATCCAAATATGCATGATCATCCAATCAACTGTATATaGTCTGTGTTTATTCATCCT | + |
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Preference number: 2 (lower is better) Translates to: PVSITWTKGGNNPNMHDHPINCI*SVFIHP Trigger: AGGATGAATAAACACAGACCATATACAGTTGATTGG...ATGATCATGCATATTTGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR CAA 90 bp | AACAAGGATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGCAAGTATCCCATAACTaGGTTTCAAATCCAGACAAT | + |
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Preference number: 3 (lower is better) Translates to: NKDPVNSCISLLPPLFSQQVSHN*VSNPDN Trigger: ATTGTCTGGATTTGAAACCAAGTTATGGGATACTTG...CTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGATCCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR CAA 90 bp | GAAGAAGACAATGACATAAAACAGTACAGCGCAGATGGGACTTGGGGTTCGAATCAAGTATCCCATAACTaGGTTTCAAATCCAGACAAT | + |
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Preference number: 3 (lower is better) Translates to: EEDNDIKQYSADGTWGSNQVSHN*VSNPDN Trigger: ATTGTCTGGATTTGAAACCAAGTTATGGGATACTTG...ATTCGAACCCCAAGTCCCATCTGCGCTGTACTGTTTTATGTCATTGTCTTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR-3UTR CAA 90 bp | TGTTCACACCAGTATCAATTACATGGACAAAAGGTGGCAACAATCCAAATATGCCAAATCGGAAGATGTTaGGGTAATGGGAAGAGAACT | + |
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Preference number: 3 (lower is better) Translates to: CSHQYQLHGQKVATIQICQIGRC*GNGKRT Trigger: AGTTCTCTTCCCATTACCCAAACATCTTCCGATTTG...GCATATTTGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGGTGTGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR TCA 72 bp | CAAAAGGTGGCAACAATCCAAATATGCATGATCATATaGAAGAGTATACATACACACACACACACACACACA | + |
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Preference number: 3 (lower is better) Translates to: QKVATIQICMII*KSIHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTATGTATACTCTTTCATATGATCATGCATATTTGGATTGTTGCCACCTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| 3UTR CCA 72 bp | TATTTGTATGCCAAACACTACAAATCGGAAGATGTTTaGGTAATGGGAAGAGAACTCTTCAACAACTATTGT | + |
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Preference number: 3 (lower is better) Translates to: YLYAKHYKSEDV*VMGRELFNNYC Trigger: ACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATACAAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | ACAAGGATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTATCGTGTCATCCTTTTaGCCAAGCGCTGCCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TRIRSTPAFPYSRPFSVSIVSSF*PSAARG Trigger: ACCCCTGGCAGCGCTTGGTCAAAAGGATGACACGAT...ACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGATCCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR TCA 90 bp | ATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTGTCATCATCGTGTCATCCTTTTaGCCAAGCGCTGCCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: IRSTPAFPYSRPFSVSVIIVSSF*PSAARG Trigger: ACCCCTGGCAGCGCTTGGTCAAAAGGATGACACGAT...GATGACACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR TCA 90 bp | ACAAGGATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTAAACCACCCCTGCCATaGGTTGGTGGAAGAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: TRIRSTPAFPYSRPFSVSKPPLP*VGGRTS Trigger: AGAGGTTCTTCCACCAACTCATGGCAGGGGTGGTTT...ACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGATCCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR GCA 90 bp | ACAAGGATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTCTTTTGACCAAGCGCTaGCAGGGGTTCTGTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: TRIRSTPAFPYSRPFSVSLLTKR*QGFCED Trigger: ATCTTCACAGAACCCCTGGCAGCGCTTGGTCAAAAG...ACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGATCCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CCA 90 bp | ATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTGTCATCAACAGATACTGGATATaGCCTTCCCTCCTGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: IRSTPAFPYSRPFSVSVINRYWI*PSLLWP Trigger: TGGCCACAGGAGGGAAGGCCATATCCAGTATCTGTT...GATGACACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR TCA 90 bp | AACAAGGATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGGAAAAACTGATGCCCTaGACCAGTTTGTCCACGTTC | + |
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Preference number: 4 (lower is better) Translates to: NKDPVNSCISLLPPLFSQEKLMP*TSLSTF Trigger: GAACGTGGACAAACTGGTTCAGGGCATCAGTTTTTC...CTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGATCCTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR GCA 90 bp | ACAAGGATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTCCTTCTCCCAAAGTTTaGACCAAATCCCAGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: TRIRSTPAFPYSRPFSVSPSPKV*TKSQSS Trigger: GGAAGACTGGGATTTGGTGCAAACTTTGGGAGAAGG...ACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGATCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR TCA 90 bp | GTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCTGCCAGGGGTTCTGTaGAGATCCAGGGGTACCGAG | + |
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Preference number: 4 (lower is better) Translates to: VCQTLQIGRCLGNGKRTLLPGVL*RSRGTE Trigger: CTCGGTACCCCTGGATCTTCACAGAACCCCTGGCAG...AAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | GTCAAGTTGGGCCAGGCATGCTATGTAATCACAGTATTTGGGAGACAGAGTCAGGAAAAACTGATGCCCTaGACCAGTTTGTCCACGTTC | + |
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Preference number: 4 (lower is better) Translates to: VKLGQACYVITVFGRQSQEKLMP*TSLSTF Trigger: GAACGTGGACAAACTGGTTCAGGGCATCAGTTTTTC...CTGACTCTGTCTCCCAAATACTGTGATTACATAGCATGCCTGGCCCAACTTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR TCA 90 bp | GCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAAACCACCCCTGCCATaGGTTGGTGGAAGAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: AKHYKSEDVWVMGRELFNKPPLP*VGGRTS Trigger: AGAGGTTCTTCCACCAACTCATGGCAGGGGTGGTTT...GTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | CCAGTATCAATTACATGGACAAAAGGTGGCAACAATCCAAATATGCATGATCATCTGCCAGGGGTTCTGTaGAGATCCAGGGGTACCGAG | + |
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Preference number: 4 (lower is better) Translates to: PVSITWTKGGNNPNMHDHLPGVL*RSRGTE Trigger: CTCGGTACCCCTGGATCTTCACAGAACCCCTGGCAG...ATGATCATGCATATTTGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR TCA 90 bp | CAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTTTCTGCCAGGGGTTCTGTaGAGATCCAGGGGTACCGAG | + |
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Preference number: 4 (lower is better) Translates to: QIGRCLGNGKRTLQQLLFLPGVL*RSRGTE Trigger: CTCGGTACCCCTGGATCTTCACAGAACCCCTGGCAG...AAACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | GTCAAGTTGGGCCAGGCATGCTATGTAATCACAGTATTTGGGAGACAGAGTCAGTCAGGAAGTGTCTCTTaGACTCTAATCCATCACCCT | + |
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Preference number: 4 (lower is better) Translates to: VKLGQACYVITVFGRQSQSGSVS*TLIHHP Trigger: AGGGTGATGGATTAGAGTTCAAGAGACACTTCCTGA...CTGACTCTGTCTCCCAAATACTGTGATTACATAGCATGCCTGGCCCAACTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR GCA 90 bp | GAAGAAGACAATGACATAAAACAGTACAGCGCAGATGGGACTTGGGGTTCGAATCTTTTGACCAAGCGCTaGCAGGGGTTCTGTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: EEDNDIKQYSADGTWGSNLLTKR*QGFCED Trigger: ATCTTCACAGAACCCCTGGCAGCGCTTGGTCAAAAG...ATTCGAACCCCAAGTCCCATCTGCGCTGTACTGTTTTATGTCATTGTCTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CCA 90 bp | GTCAAGTTGGGCCAGGCATGCTATGTAATCACAGTATTTGGGAGACAGAGTCAGTTTCTGGACAGTCTATaGCCCGCTTCATGTCTACAA | + |
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Preference number: 4 (lower is better) Translates to: VKLGQACYVITVFGRQSQFLDSL*PASCLQ Trigger: TTGTAGACATGAAGCGGGCCATAGACTGTCCAGAAA...CTGACTCTGTCTCCCAAATACTGTGATTACATAGCATGCCTGGCCCAACTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CCA 90 bp | ACCACAGTGGGACTACAAGTGGGAAACAGGAGACTGAATAGAGTTAGGTTCAAGTCCAGAAACAGATACTaGATATGGCCTTCCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: TTVGLQVGNRRLNRVRFKSRNRY*IWPSLL Trigger: CAGGAGGGAAGGCCATATCCAGTATCTGTTTCTGGA...CTTGAACCTAACTCTATTCAGTCTCCTGTTTCCCACTTGTAGTCCCACTGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CCA 90 bp | ACAAGGATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTAGGCATCCCTATGTCTaGCTCAATTCTATCAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: TRIRSTPAFPYSRPFSVSRHPYV*LNSIKK Trigger: CTTTTTGATAGAATTGAGCCAGACATAGGGATGCCT...ACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGATCCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CCA 90 bp | ATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTGTCATCTGCTCCTCTGTTAAGTaGTTTGTTGTACCATCTATC | + |
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Preference number: 4 (lower is better) Translates to: IRSTPAFPYSRPFSVSVICSSVK*FVVPSI Trigger: GATAGATGGTACAACAAACCACTTAACAGAGGAGCA...GATGACACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CCA 90 bp | GCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACGTTCTCGGCTCTGGCTaGGAACTAGAGAACTTCACG | + |
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Preference number: 4 (lower is better) Translates to: AKHYKSEDVWVMGRELFNVLGSG*ELENFT Trigger: CGTGAAGTTCTCTAGTTCCCAGCCAGAGCCGAGAAC...GTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | ACAAGGATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTAAGTCCAAATTGGAATaGATGTGCTTAGAGAATCCA | + |
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Preference number: 4 (lower is better) Translates to: TRIRSTPAFPYSRPFSVSKSKLE*MCLENP Trigger: TGGATTCTCTAAGCACATTCATTCCAATTTGGACTT...ACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGATCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR TCA 90 bp | ATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTGTCATCAAGTCCAAATTGGAATaGATGTGCTTAGAGAATCCA | + |
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Preference number: 4 (lower is better) Translates to: IRSTPAFPYSRPFSVSVIKSKLE*MCLENP Trigger: TGGATTCTCTAAGCACATTCATTCCAATTTGGACTT...GATGACACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR TCA 90 bp | ATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTGTCATCGTTGATACAGTAACCTaGTTCATACAACTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: IRSTPAFPYSRPFSVSVIVDTVT*FIQLFF Trigger: GAAGAAGAGTTGTATGAATCAGGTTACTGTATCAAC...GATGACACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR GCA 90 bp | AAATGTCACATAGCAGCACTCTATTCACCAGGAATGTGCAGAGCTGACAGCTTCATGCCGAAATACCGTTaGCAAGCCAAAGTCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KCHIAALYSPGMCRADSFMPKYR*QAKVRD Trigger: ATCTCTGACTTTGGCTTGGCAACGGTATTTCGGCAT...GAAGCTGTCAGCTCTGCACATTCCTGGTGAATAGAGTGCTGCTATGTGACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR GCA 90 bp | GTCAAGTTGGGCCAGGCATGCTATGTAATCACAGTATTTGGGAGACAGAGTCAGCGTTCACGATTATTATaGCGAAATACCGTTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKLGQACYVITVFGRQSQRSRLL*RNTVAK Trigger: CTTGGCAACGGTATTTCGGCATAATAATCGTGAACG...CTGACTCTGTCTCCCAAATACTGTGATTACATAGCATGCCTGGCCCAACTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CCA 90 bp | ACAAGGATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTTTTCTTAATATTTTCTaGACAGTCTATGGCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TRIRSTPAFPYSRPFSVSFLNIF*TVYGPL Trigger: AAGCGGGCCATAGACTGTCCAGAAAATATTAAGAAA...ACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGATCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CCA 90 bp | AACAAGGATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTTTCTTAATATTTTCTaGACAGTCTATGGCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKDPVNSCISLLPPLFSQFLNIF*TVYGPL Trigger: AAGCGGGCCATAGACTGTCCAGAAAATATTAAGAAA...CTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGATCCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CCA 90 bp | TATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCGTTCTCGGCTCTGGCTaGGAACTAGAGAACTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: YAKHYKSEDVWVMGRELFVLGSG*ELENFT Trigger: CGTGAAGTTCTCTAGTTCCCAGCCAGAGCCGAGAAC...GAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR TCA 90 bp | TACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTATCGTGTCATCCTTTTaGCCAAGCGCTGCCAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YKSEDVWVMGRELFNNYCIVSSF*PSAARG Trigger: ACCCCTGGCAGCGCTTGGTCAAAAGGATGACACGAT...ACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR GCA 90 bp | GAAGAAGACAATGACATAAAACAGTACAGCGCAGATGGGACTTGGGGTTCGAATATGCCGAAATACCGTTaGCAAGCCAAAGTCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EEDNDIKQYSADGTWGSNMPKYR*QAKVRD Trigger: ATCTCTGACTTTGGCTTGGCAACGGTATTTCGGCAT...ATTCGAACCCCAAGTCCCATCTGCGCTGTACTGTTTTATGTCATTGTCTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
||
| CDS-3UTR GCA 90 bp | GTCAAGTTGGGCCAGGCATGCTATGTAATCACAGTATTTGGGAGACAGAGTCAGTTCTCCAGCCAACATTaGAGTAAGTACTATTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VKLGQACYVITVFGRQSQFSSQH*SKYYST Trigger: TGTGGAATAGTACTTACTGCAATGTTGGCTGGAGAA...CTGACTCTGTCTCCCAAATACTGTGATTACATAGCATGCCTGGCCCAACTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
||
| CDS-3UTR CCA 90 bp | GAAGAAGACAATGACATAAAACAGTACAGCGCAGATGGGACTTGGGGTTCGAATTTTCTGGACAGTCTATaGCCCGCTTCATGTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: EEDNDIKQYSADGTWGSNFLDSL*PASCLQ Trigger: TTGTAGACATGAAGCGGGCCATAGACTGTCCAGAAA...ATTCGAACCCCAAGTCCCATCTGCGCTGTACTGTTTTATGTCATTGTCTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
||
| CDS-3UTR CCA 90 bp | GTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTGGAAACCAAACCTTCTaGCTGCTCACAACATCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCQTLQIGRCLGNGKRTLGNQTF*LLTTSL Trigger: CAGCGATGTTGTGAGCAGCCAGAAGGTTTGGTTTCC...AAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | AAATGTCACATAGCAGCACTCTATTCACCAGGAATGTGCAGAGCTGACAGCTTCCAAAGTCAGAGATTTTaGGGTTATCCCTTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KCHIAALYSPGMCRADSFQSQRF*GYPFHP Trigger: TGGATGAAAGGGATAACCTCAAAATCTCTGACTTTG...GAAGCTGTCAGCTCTGCACATTCCTGGTGAATAGAGTGCTGCTATGTGACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CCA 90 bp | TGTTCACACCAGTATCAATTACATGGACAAAAGGTGGCAACAATCCAAATATGCAACAGATACTGGATATaGCCTTCCCTCCTGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSHQYQLHGQKVATIQICNRYWI*PSLLWP Trigger: TGGCCACAGGAGGGAAGGCCATATCCAGTATCTGTT...GCATATTTGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGGTGTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
||
| CDS-3UTR CCA 90 bp | GTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTTCCAGAAACAGATACTaGATATGGCCTTCCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCQTLQIGRCLGNGKRTLSRNRY*IWPSLL Trigger: CAGGAGGGAAGGCCATATCCAGTATCTGTTTCTGGA...AAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR CCA 90 bp | GTCAAGTTGGGCCAGGCATGCTATGTAATCACAGTATTTGGGAGACAGAGTCAGGGACCAAACATCAACTaGTTCTGCATGAAATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VKLGQACYVITVFGRQSQGPNIN*FCMKFF Trigger: AAAGAATTTCATGCAGAACCAGTTGATGTTTGGTCC...CTGACTCTGTCTCCCAAATACTGTGATTACATAGCATGCCTGGCCCAACTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CCA 90 bp | TACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTGTTCTCGGCTCTGGCTaGGAACTAGAGAACTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: YKSEDVWVMGRELFNNYCVLGSG*ELENFT Trigger: CGTGAAGTTCTCTAGTTCCCAGCCAGAGCCGAGAAC...ACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CCA 90 bp | TTTGTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTGGAAACCAAACCTTCTaGCTGCTCACAACATCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FVCQTLQIGRCLGNGKRTGNQTF*LLTTSL Trigger: CAGCGATGTTGTGAGCAGCCAGAAGGTTTGGTTTCC...AGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | TCTTCAACAACTATTGTTTGCAGTTTGCAGAATAGGATAATCTTCTCTAGGAAGAAACCACCCCTGCCATaGGTTGGTGGAAGAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTTIVCSLQNRIIFSRKKPPLP*VGGRTS Trigger: AGAGGTTCTTCCACCAACTCATGGCAGGGGTGGTTT...CTTCCTAGAGAAGATTATCCTATTCTGCAAACTGCAAACAATAGTTGTTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR TCA 90 bp | GTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTTCAGGAAGTGTCTCTTaGACTCTAATCCATCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCQTLQIGRCLGNGKRTLSGSVS*TLIHHP Trigger: AGGGTGATGGATTAGAGTTCAAGAGACACTTCCTGA...AAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR GCA 90 bp | GTAGTATTTGTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGCCTTCTCCCAAAGTTTaGACCAAATCCCAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVFVCQTLQIGRCLGNGKPSPKV*TKSQSS Trigger: GGAAGACTGGGATTTGGTGCAAACTTTGGGAGAAGG...CTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATACAAATACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR GCA 90 bp | AAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTTTGCTTTTGACCAAGCGCTaGCAGGGGTTCTGTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSEDVWVMGRELFNNYCLLLTKR*QGFCED Trigger: ATCTTCACAGAACCCCTGGCAGCGCTTGGTCAAAAG...CAAACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CCA 90 bp | TATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCTTTCTGGACAGTCTATaGCCCGCTTCATGTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: YAKHYKSEDVWVMGRELFFLDSL*PASCLQ Trigger: TTGTAGACATGAAGCGGGCCATAGACTGTCCAGAAA...GAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | CAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTTTCAATCAGAATATTCCTaGCAGCTATCACTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QIGRCLGNGKRTLQQLLFQSEYS*QLSLGW Trigger: CCAGCCCAGTGATAGCTGTCAGGAATATTCTGATTG...AAACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | TACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTCAATCAGAATATTCCTaGCAGCTATCACTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YKSEDVWVMGRELFNNYCQSEYS*QLSLGW Trigger: CCAGCCCAGTGATAGCTGTCAGGAATATTCTGATTG...ACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | GCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACTCAACTAGAATTTTATaGAGCAAAGCCAGAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKHYKSEDVWVMGRELFNSTRIL*SKARGA Trigger: TGCTCCTCTGGCTTTGCTTCATAAAATTCTAGTTGA...GTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR GCA 90 bp | TACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTCCTTCTCCCAAAGTTTaGACCAAATCCCAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YKSEDVWVMGRELFNNYCPSPKV*TKSQSS Trigger: GGAAGACTGGGATTTGGTGCAAACTTTGGGAGAAGG...ACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR GCA 90 bp | GTAGTATTTGTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGATGCCGAAATACCGTTaGCAAGCCAAAGTCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVFVCQTLQIGRCLGNGKMPKYR*QAKVRD Trigger: ATCTCTGACTTTGGCTTGGCAACGGTATTTCGGCAT...CTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATACAAATACTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR GCA 90 bp | TATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCCGTTCACGATTATTATaGCGAAATACCGTTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YAKHYKSEDVWVMGRELFRSRLL*RNTVAK Trigger: CTTGGCAACGGTATTTCGGCATAATAATCGTGAACG...GAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR GCA 90 bp | GCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACTTCTCCAGCCAACATTaGAGTAAGTACTATTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AKHYKSEDVWVMGRELFNFSSQH*SKYYST Trigger: TGTGGAATAGTACTTACTGCAATGTTGGCTGGAGAA...GTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CCA 90 bp | GAGAACTCTTCAACAACTATTGTTTGCAGTTTGCAGAATAGGATAATCTTCTCTAACAGATACTGGATATaGCCTTCCCTCCTGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ENSSTTIVCSLQNRIIFSNRYWI*PSLLWP Trigger: TGGCCACAGGAGGGAAGGCCATATCCAGTATCTGTT...AGAGAAGATTATCCTATTCTGCAAACTGCAAACAATAGTTGTTGAAGAGTTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CCA 90 bp | CAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTTTTCCAGAAACAGATACTaGATATGGCCTTCCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QIGRCLGNGKRTLQQLLFSRNRY*IWPSLL Trigger: CAGGAGGGAAGGCCATATCCAGTATCTGTTTCTGGA...AAACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CCA 90 bp | TCTTCAACAACTATTGTTTGCAGTTTGCAGAATAGGATAATCTTCTCTAGGAAGGGAAACCAAACCTTCTaGCTGCTCACAACATCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSTTIVCSLQNRIIFSRKGNQTF*LLTTSL Trigger: CAGCGATGTTGTGAGCAGCCAGAAGGTTTGGTTTCC...CTTCCTAGAGAAGATTATCCTATTCTGCAAACTGCAAACAATAGTTGTTGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | GTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTTCAACTAGAATTTTATaGAGCAAAGCCAGAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCQTLQIGRCLGNGKRTLSTRIL*SKARGA Trigger: TGCTCCTCTGGCTTTGCTTCATAAAATTCTAGTTGA...AAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | GAGAACTCTTCAACAACTATTGTTTGCAGTTTGCAGAATAGGATAATCTTCTCTGAAAAACTGATGCCCTaGACCAGTTTGTCCACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ENSSTTIVCSLQNRIIFSEKLMP*TSLSTF Trigger: GAACGTGGACAAACTGGTTCAGGGCATCAGTTTTTC...AGAGAAGATTATCCTATTCTGCAAACTGCAAACAATAGTTGTTGAAGAGTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | CAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTTTTCAGGAAGTGTCTCTTaGACTCTAATCCATCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: QIGRCLGNGKRTLQQLLFSGSVS*TLIHHP Trigger: AGGGTGATGGATTAGAGTTCAAGAGACACTTCCTGA...AAACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR GCA 90 bp | TTTGTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCGTTCACGATTATTATaGCGAAATACCGTTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FVCQTLQIGRCLGNGKRTRSRLL*RNTVAK Trigger: CTTGGCAACGGTATTTCGGCATAATAATCGTGAACG...AGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR GCA 90 bp | GTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTTTCTCCAGCCAACATTaGAGTAAGTACTATTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VCQTLQIGRCLGNGKRTLFSSQH*SKYYST Trigger: TGTGGAATAGTACTTACTGCAATGTTGGCTGGAGAA...AAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR CCA 90 bp | GTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTAGGCATCCCTATGTCTaGCTCAATTCTATCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCQTLQIGRCLGNGKRTLRHPYV*LNSIKK Trigger: CTTTTTGATAGAATTGAGCCAGACATAGGGATGCCT...AAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR CCA 90 bp | TATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCTGCTCCTCTGTTAAGTaGTTTGTTGTACCATCTATC | + |
|
Preference number: 4 (lower is better) Translates to: YAKHYKSEDVWVMGRELFCSSVK*FVVPSI Trigger: GATAGATGGTACAACAAACCACTTAACAGAGGAGCA...GAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR CCA 90 bp | TATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCTCACGGTTTCTTCACTaGAACCATTATTTACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YAKHYKSEDVWVMGRELFSRFLH*NHYLLE Trigger: CTCCAGTAAATAATGGTTCCAGTGAAGAAACCGTGA...GAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR GCA 90 bp | GCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACGTCTACAATTTTCACTaGAACAGCTTCTTCAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AKHYKSEDVWVMGRELFNVYNFH*NSFFSY Trigger: ATAACTGAAGAAGCTGTTGCAGTGAAAATTGTAGAC...GTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR CCA 90 bp | GTAGTATTTGTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGGCATCCCTATGTCTaGCTCAATTCTATCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VVFVCQTLQIGRCLGNGKRHPYV*LNSIKK Trigger: CTTTTTGATAGAATTGAGCCAGACATAGGGATGCCT...CTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATACAAATACTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR CCA 90 bp | GTAGTATTTGTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGTGCTCCTCTGTTAAGTaGTTTGTTGTACCATCTATC | + |
|
Preference number: 4 (lower is better) Translates to: VVFVCQTLQIGRCLGNGKCSSVK*FVVPSI Trigger: GATAGATGGTACAACAAACCACTTAACAGAGGAGCA...CTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATACAAATACTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | CAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTTTCAAAGTCAGAGATTTTaGGGTTATCCCTTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QIGRCLGNGKRTLQQLLFQSQRF*GYPFHP Trigger: TGGATGAAAGGGATAACCTCAAAATCTCTGACTTTG...AAACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR TCA 90 bp | AAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTTTGTCAACTAGAATTTTATaGAGCAAAGCCAGAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSEDVWVMGRELFNNYCLSTRIL*SKARGA Trigger: TGCTCCTCTGGCTTTGCTTCATAAAATTCTAGTTGA...CAAACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | CAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTTTTCTAATCCATCACCCTaGTTCATACAACTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QIGRCLGNGKRTLQQLLFSNPSP*FIQLFF Trigger: GAAGAAGAGTTGTATGAATCAGGGTGATGGATTAGA...AAACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173963.9 |
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| CDS-3UTR GCA 90 bp | GTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTGTCTACAATTTTCACTaGAACAGCTTCTTCAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VCQTLQIGRCLGNGKRTLVYNFH*NSFFSY Trigger: ATAACTGAAGAAGCTGTTGCAGTGAAAATTGTAGAC...AAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CCA 90 bp | CAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTTTTCACGGTTTCTTCACTaGAACCATTATTTACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QIGRCLGNGKRTLQQLLFSRFLH*NHYLLE Trigger: CTCCAGTAAATAATGGTTCCAGTGAAGAAACCGTGA...AAACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| 3UTR CAA 72 bp | GTATTTGTATGCCAAACACTACAAATCGGAAGATGTTaGGGTAATGGGAAGAGAACTCTTCAACAACTATTG | + |
|
Preference number: 4 (lower is better) Translates to: VFVCQTLQIGRC*GNGKRTLQQLL Trigger: CAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATACAAATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | CAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTTTAAGTCCAAATTGGAATaGATGTGCTTAGAGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QIGRCLGNGKRTLQQLLFKSKLE*MCLENP Trigger: TGGATTCTCTAAGCACATTCATTCCAATTTGGACTT...AAACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR TCA 90 bp | ATATTCATGTTCACACCAGTATCAATTACATGGACAAAAGGTGGCAACAATCCAGTTGATACAGTAACCTaGTTCATACAACTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFMFTPVSITWTKGGNNPVDTVT*FIQLFF Trigger: GAAGAAGAGTTGTATGAATCAGGTTACTGTATCAAC...TGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGGTGTGAACATGAATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
||
| CDS-3UTR CCA 90 bp | TACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTGGACCAAACATCAACTaGTTCTGCATGAAATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YKSEDVWVMGRELFNNYCGPNIN*FCMKFF Trigger: AAAGAATTTCATGCAGAACCAGTTGATGTTTGGTCC...ACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CCA 90 bp | TCTTCAACAACTATTGTTTGCAGTTTGCAGAATAGGATAATCTTCTCTAGGAAGGGACCAAACATCAACTaGTTCTGCATGAAATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTTIVCSLQNRIIFSRKGPNIN*FCMKFF Trigger: AAAGAATTTCATGCAGAACCAGTTGATGTTTGGTCC...CTTCCTAGAGAAGATTATCCTATTCTGCAAACTGCAAACAATAGTTGTTGAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS CCA 90 bp | GTTCGAGGGACCAGTGTCCCACAAGGAAAGCCCTGTTCTCGGCTCTaGCTGGGAACTAGAGAACTTCACGGTTTCTTCACTGGAACCATT | + |
|
Preference number: 5 (lower is better) Translates to: VRGTSVPQGKPCSRL*LGTRELHGFFTGTI Trigger: AATGGTTCCAGTGAAGAAACCGTGAAGTTCTCTAGTTCCCAGCCAGAGCCGAGAACAGGGCTTTCCTTGTGGGACACTGGTCCCTCGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS TCA 90 bp | ACAAGCATATGCTCAGGACACGTAGGCTGGGAAAAACTGATGCCCTaGACCAGTTTGTCCACGTTCGAGGGACCAGTGTCCCACAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSICSGHVGWEKLMP*TSLSTFEGPVSHKE Trigger: TTCCTTGTGGGACACTGGTCCCTCGAACGTGGACAAACTGGTTCAGGGCATCAGTTTTTCCCAGCCTACGTGTCCTGAGCATATGCTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS TCA 90 bp | AAGCGCTGCCAGGGGTTCTGTGAAGATCCAGGGGTACCGAGTAACTaGCTGTTTACAAGCATATGCTCAGGACACGTAGGCTGGGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KRCQGFCEDPGVPSN*LFTSICSGHVGWEK Trigger: TTTTTCCCAGCCTACGTGTCCTGAGCATATGCTTGTAAACAGTCAGTTACTCGGTACCCCTGGATCTTCACAGAACCCCTGGCAGCGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS CCA 90 bp | GAGGGACCAGTGTCCCACAAGGAAAGCCCTGTTCTCGGCTCTGGCTaGGAACTAGAGAACTTCACGGTTTCTTCACTGGAACCATTATTT | + |
|
Preference number: 5 (lower is better) Translates to: EGPVSHKESPVLGSG*ELENFTVSSLEPLF Trigger: AAATAATGGTTCCAGTGAAGAAACCGTGAAGTTCTCTAGTTCCCAGCCAGAGCCGAGAACAGGGCTTTCCTTGTGGGACACTGGTCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS GCA 90 bp | ACAGCTATCACTGGGCTGGTCCCACGGCAATTCTCCAGCCAACATTaGAGTAAGTACTATTCCACAGGACCAAACATCAACTGGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TAITGLVPRQFSSQH*SKYYSTGPNINWFC Trigger: GCAGAACCAGTTGATGTTTGGTCCTGTGGAATAGTACTTACTGCAATGTTGGCTGGAGAATTGCCGTGGGACCAGCCCAGTGATAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CAA 90 bp | ATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTGTCATCTATGCCGAAATACCGTaGCCAAGCCAAAGTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: IRSTPAFPYSRPFSVSVIYAEIP*PSQSQR Trigger: TCTCTGACTTTGGCTTGGCAACGGTATTTCGGCATA...GATGACACTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CAA 90 bp | AACAAGGATCCGGTCAACTCCTGCATTTCCTTACTCCCGCCCCTTTTCAGTCAGTCTATTCACAGCAAGTaGAACTTCTCCATAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: NKDPVNSCISLLPPLFSQSIHSK*NFSIGT Trigger: GGTGCCTATGGAGAAGTTCAACTTGCTGTGAATAGA...CTGACTGAAAAGGGGCGGGAGTAAGGAAATGCAGGAGTTGACCGGATCCTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CAA 90 bp | AAATGTCACATAGCAGCACTCTATTCACCAGGAATGTGCAGAGCTGACAGCTTCTATGCCGAAATACCGTaGCCAAGCCAAAGTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KCHIAALYSPGMCRADSFYAEIP*PSQSQR Trigger: TCTCTGACTTTGGCTTGGCAACGGTATTTCGGCATA...GAAGCTGTCAGCTCTGCACATTCCTGGTGAATAGAGTGCTGCTATGTGACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CAA 90 bp | GTCAAGTTGGGCCAGGCATGCTATGTAATCACAGTATTTGGGAGACAGAGTCAGCCAAAGTCAGAGATTTaGAGGTTATCCCTTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: VKLGQACYVITVFGRQSQPKSEI*RLSLSS Trigger: GGATGAAAGGGATAACCTCAAAATCTCTGACTTTGG...CTGACTCTGTCTCCCAAATACTGTGATTACATAGCATGCCTGGCCCAACTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CAA 90 bp | TGTTCACACCAGTATCAATTACATGGACAAAAGGTGGCAACAATCCAAATATGCAATCGTGTCATCCTTTaGACCAAGCGCTGCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSHQYQLHGQKVATIQICNRVIL*TKRCQG Trigger: CCCCTGGCAGCGCTTGGTCAAAAGGATGACACGATT...GCATATTTGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGGTGTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CAA 90 bp | AAATGTCACATAGCAGCACTCTATTCACCAGGAATGTGCAGAGCTGACAGCTTCCCAAAGTCAGAGATTTaGAGGTTATCCCTTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: KCHIAALYSPGMCRADSFPKSEI*RLSLSS Trigger: GGATGAAAGGGATAACCTCAAAATCTCTGACTTTGG...GAAGCTGTCAGCTCTGCACATTCCTGGTGAATAGAGTGCTGCTATGTGACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CAA 90 bp | TACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTAATCGTGTCATCCTTTaGACCAAGCGCTGCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YKSEDVWVMGRELFNNYCNRVIL*TKRCQG Trigger: CCCCTGGCAGCGCTTGGTCAAAAGGATGACACGATT...ACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CAA 90 bp | GAAGAAGACAATGACATAAAACAGTACAGCGCAGATGGGACTTGGGGTTCGAATTTCAGGAAGTGTCTCTaGAACTCTAATCCATCACCC | + |
|
Preference number: 5 (lower is better) Translates to: EEDNDIKQYSADGTWGSNFRKCL*NSNPSP Trigger: GGGTGATGGATTAGAGTTCAAGAGACACTTCCTGAA...ATTCGAACCCCAAGTCCCATCTGCGCTGTACTGTTTTATGTCATTGTCTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CAA 90 bp | TCTTCAACAACTATTGTTTGCAGTTTGCAGAATAGGATAATCTTCTCTAGGAAGAATCGTGTCATCCTTTaGACCAAGCGCTGCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSTTIVCSLQNRIIFSRKNRVIL*TKRCQG Trigger: CCCCTGGCAGCGCTTGGTCAAAAGGATGACACGATT...CTTCCTAGAGAAGATTATCCTATTCTGCAAACTGCAAACAATAGTTGTTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS GCA 90 bp | GGTAAAGTCCCACACATCTTGTTCAGTAAGCGTTCACGATTATTATaGCGAAATACCGTTGCCAAGCCAAAGTCAGAGATTTTGAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GKVPHILFSKRSRLL*RNTVAKPKSEILRL Trigger: TAACCTCAAAATCTCTGACTTTGGCTTGGCAACGGTATTTCGGCATAATAATCGTGAACGCTTACTGAACAAGATGTGTGGGACTTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CAA 90 bp | GTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTTCTATTCACAGCAAGTaGAACTTCTCCATAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: VCQTLQIGRCLGNGKRTLSIHSK*NFSIGT Trigger: GGTGCCTATGGAGAAGTTCAACTTGCTGTGAATAGA...AAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CAA 90 bp | AAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTTTGGAACCTCTGAGCATCTaGTTCAGGCATCCCTATGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSEDVWVMGRELFNNYCLEPLSI*FRHPYV Trigger: GACATAGGGATGCCTGAACAAGATGCTCAGAGGTTC...CAAACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CAA 90 bp | ATATTCATGTTCACACCAGTATCAATTACATGGACAAAAGGTGGCAACAATCCAGAACCTCTGAGCATCTaGTTCAGGCATCCCTATGTC | + |
|
Preference number: 5 (lower is better) Translates to: IFMFTPVSITWTKGGNNPEPLSI*FRHPYV Trigger: GACATAGGGATGCCTGAACAAGATGCTCAGAGGTTC...TGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGGTGTGAACATGAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CAA 90 bp | TTTGTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTGGTCTCTTTCAGGCATaGGTAAGATTTGTCCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: FVCQTLQIGRCLGNGKRTGLFQA*VRFVRI Trigger: GATGCGGACAAATCTTACCAATGCCTGAAAGAGACC...AGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CAA 90 bp | GTAGTATTTGTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGTCTATTCACAGCAAGTaGAACTTCTCCATAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: VVFVCQTLQIGRCLGNGKSIHSK*NFSIGT Trigger: GGTGCCTATGGAGAAGTTCAACTTGCTGTGAATAGA...CTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATACAAATACTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CAA 90 bp | TATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCCCAAAGTCAGAGATTTaGAGGTTATCCCTTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: YAKHYKSEDVWVMGRELFPKSEI*RLSLSS Trigger: GGATGAAAGGGATAACCTCAAAATCTCTGACTTTGG...GAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS-3UTR CAA 90 bp | ATATTCATGTTCACACCAGTATCAATTACATGGACAAAAGGTGGCAACAATCCATATGCCGAAATACCGTaGCCAAGCCAAAGTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: IFMFTPVSITWTKGGNNPYAEIP*PSQSQR Trigger: TCTCTGACTTTGGCTTGGCAACGGTATTTCGGCATA...TGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGGTGTGAACATGAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS-3UTR CAA 90 bp | AAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCTTCAACAACTATTGTTTGGGTCTCTTTCAGGCATaGGTAAGATTTGTCCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: KSEDVWVMGRELFNNYCLGLFQA*VRFVRI Trigger: GATGCGGACAAATCTTACCAATGCCTGAAAGAGACC...CAAACAATAGTTGTTGAAGAGTTCTCTTCCCATTACCCAAACATCTTCCGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR CAA 90 bp | TTTGTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTTTCAGGAAGTGTCTCTaGAACTCTAATCCATCACCC | + |
|
Preference number: 5 (lower is better) Translates to: FVCQTLQIGRCLGNGKRTFRKCL*NSNPSP Trigger: GGGTGATGGATTAGAGTTCAAGAGACACTTCCTGAA...AGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS GCA 90 bp | ATTTTCTGGACAGTCTATGGCCCGCTTCATGTCTACAATTTTCACTaGAACAGCTTCTTCAGTTATTCTATTCACAGCAAGTTGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: IFWTVYGPLHVYNFH*NSFFSYSIHSKLNF Trigger: GAAGTTCAACTTGCTGTGAATAGAATAACTGAAGAAGCTGTTGCAGTGAAAATTGTAGACATGAAGCGGGCCATAGACTGTCCAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000172742.2 ENSMUST00000173963.9 |
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| CDS-3UTR CAA 90 bp | TCTTCAACAACTATTGTTTGCAGTTTGCAGAATAGGATAATCTTCTCTAGGAAGGGTCTCTTTCAGGCATaGGTAAGATTTGTCCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SSTTIVCSLQNRIIFSRKGLFQA*VRFVRI Trigger: GATGCGGACAAATCTTACCAATGCCTGAAAGAGACC...CTTCCTAGAGAAGATTATCCTATTCTGCAAACTGCAAACAATAGTTGTTGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR CAA 90 bp | TTTGTATGCCAAACACTACAAATCGGAAGATGTTTGGGTAATGGGAAGAGAACTCCTCTGTTAAGTGGTTaGTTGTACCATCTATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FVCQTLQIGRCLGNGKRTPLLSG*LYHLSF Trigger: GAAAGATAGATGGTACAACAAACCACTTAACAGAGG...AGTTCTCTTCCCATTACCCAAACATCTTCCGATTTGTAGTGTTTGGCATACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR CAA 90 bp | GAGAACTCTTCAACAACTATTGTTTGCAGTTTGCAGAATAGGATAATCTTCTCTTTCAGGAAGTGTCTCTaGAACTCTAATCCATCACCC | + |
|
Preference number: 5 (lower is better) Translates to: ENSSTTIVCSLQNRIIFSFRKCL*NSNPSP Trigger: GGGTGATGGATTAGAGTTCAAGAGACACTTCCTGAA...AGAGAAGATTATCCTATTCTGCAAACTGCAAACAATAGTTGTTGAAGAGTTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
||
| CDS-3UTR CAA 90 bp | ATATTCATGTTCACACCAGTATCAATTACATGGACAAAAGGTGGCAACAATCCACCTCTGTTAAGTGGTTaGTTGTACCATCTATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IFMFTPVSITWTKGGNNPPLLSG*LYHLSF Trigger: GAAAGATAGATGGTACAACAAACCACTTAACAGAGG...TGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGGTGTGAACATGAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
||
| CDS-3UTR CAA 90 bp | CAGTATCAATTACATGGACAAAAGGTGGCAACAATCCAAATATGCATGATCATACCTCTGTTAAGTGGTTaGTTGTACCATCTATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QYQLHGQKVATIQICMIIPLLSG*LYHLSF Trigger: GAAAGATAGATGGTACAACAAACCACTTAACAGAGG...TATGATCATGCATATTTGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
||
| CDS TCA 72 bp | TGCTCAGGACACGTAGGCTGGGAAAAACTGATGCCCTaGACCAGTTTGTCCACGTTCGAGGGACCAGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: CSGHVGWEKLMP*TSLSTFEGPVS Trigger: GGACACTGGTCCCTCGAACGTGGACAAACTGGTTCAGGGCATCAGTTTTTCCCAGCCTACGTGTCCTGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS CCA 72 bp | ACCAGTGTCCCACAAGGAAAGCCCTGTTCTCGGCTCTaGCTGGGAACTAGAGAACTTCACGGTTTCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: TSVPQGKPCSRL*LGTRELHGFFT Trigger: AGTGAAGAAACCGTGAAGTTCTCTAGTTCCCAGCCAGAGCCGAGAACAGGGCTTTCCTTGTGGGACACTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS GCA 72 bp | ACTGGGCTGGTCCCACGGCAATTCTCCAGCCAACATTaGAGTAAGTACTATTCCACAGGACCAAACATCAAC | + |
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Preference number: 6 (lower is better) Translates to: TGLVPRQFSSQH*SKYYSTGPNIN Trigger: GTTGATGTTTGGTCCTGTGGAATAGTACTTACTGCAATGTTGGCTGGAGAATTGCCGTGGGACCAGCCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS CAA 90 bp | CCTGATGTGGCGCGTGGCCTCTTTGCTCCTCTGTTAAGTGGTTTGTaGTACCATCTATCTTTCTTAATGTCTGGGATGGTGATCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: PDVARGLFAPLLSGL*YHLSFLMSGMVILA Trigger: AGCAAGGATCACCATCCCAGACATTAAGAAAGATAGATGGTACAACAAACCACTTAACAGAGGAGCAAAGAGGCCACGCGCCACATCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS CAA 90 bp | CCACCTGATGTGGCGCGTGGCCTCTTTGCTCCTCTGTTAAGTGGTTaGTTGTACCATCTATCTTTCTTAATGTCTGGGATGGTGATCCTT | + |
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Preference number: 6 (lower is better) Translates to: PPDVARGLFAPLLSG*LYHLSFLMSGMVIL Trigger: AAGGATCACCATCCCAGACATTAAGAAAGATAGATGGTACAACAAACCACTTAACAGAGGAGCAAAGAGGCCACGCGCCACATCAGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS CCA 72 bp | TTTCTTTCCAATCAGAATATTCCTGACAGCTATCACTaGGCTGGTCCCACGGCAATTCTCCAGCCAACATTG | + |
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Preference number: 6 (lower is better) Translates to: FLSNQNIPDSYH*AGPTAILQPTL Trigger: CAATGTTGGCTGGAGAATTGCCGTGGGACCAGCCCAGTGATAGCTGTCAGGAATATTCTGATTGGAAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS CAA 72 bp | AAGTTGAACTTCTCCATAGGCACCTTCTCCCAAAGTTaGCACCAAATCCCAGTCTTCCACAAAAGGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: KLNFSIGTFSQS*HQIPVFHKRHC Trigger: GCAGTGCCTTTTGTGGAAGACTGGGATTTGGTGCAAACTTTGGGAGAAGGTGCCTATGGAGAAGTTCAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000172742.2 ENSMUST00000173963.9 |
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| CDS CAA 72 bp | TCCGCATCCAATTTAGTAAAGAATCGTGTCATCCTTTaGACCAAGCGCTGCCAGGGGTTCTGTGAAGATCCA | + |
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Preference number: 6 (lower is better) Translates to: SASNLVKNRVIL*TKRCQGFCEDP Trigger: TGGATCTTCACAGAACCCCTGGCAGCGCTTGGTCAAAAGGATGACACGATTCTTTACTAAATTGGATGCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS CAA 90 bp | CTCACAACATCGCTGAGCTTCCCTTTAATCTTCAGGAAGTGTCTCTaGAACTCTAATCCATCACCCTTAGAAAGTCGGAAGTCAACCAGT | + |
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Preference number: 6 (lower is better) Translates to: LTTSLSFPLIFRKCL*NSNPSPLESRKSTS Trigger: ACTGGTTGACTTCCGACTTTCTAAGGGTGATGGATTAGAGTTCAAGAGACACTTCCTGAAGATTAAAGGGAAGCTCAGCGATGTTGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS TCA 72 bp | TTATTCCAATTCCATGAAGATAAACCACCCCTGCCATaGGTTGGTGGAAGAACCTCTGAGCATCTTGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LFQFHEDKPPLP*VGGRTSEHLVQ Trigger: CTGAACAAGATGCTCAGAGGTTCTTCCACCAACTCATGGCAGGGGTGGTTTATCTTCATGGAATTGGAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS CAA 72 bp | TCGCTGAGCTTCCCTTTAATCTTCAGGAAGTGTCTCTaGAACTCTAATCCATCACCCTTAGAAAGTCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SLSFPLIFRKCL*NSNPSPLESRK Trigger: CTTCCGACTTTCTAAGGGTGATGGATTAGAGTTCAAGAGACACTTCCTGAAGATTAAAGGGAAGCTCAGCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 |
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| CDS GCA 72 bp | CCACACATCTTGTTCAGTAAGCGTTCACGATTATTATaGCGAAATACCGTTGCCAAGCCAAAGTCAGAGATT | + |
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Preference number: 6 (lower is better) Translates to: PHILFSKRSRLL*RNTVAKPKSEI Trigger: AATCTCTGACTTTGGCTTGGCAACGGTATTTCGGCATAATAATCGTGAACGCTTACTGAACAAGATGTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS CAA 90 bp | CTTCTTCCACTGATAGCCCAACTTCTCGAAGGTCTCTTTCAGGCATaGGTAAGATTTGTCCGCATCCAATTTAGTAAAGAATCGTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LLPLIAQLLEGLFQA*VRFVRIQFSKESCH Trigger: ATGACACGATTCTTTACTAAATTGGATGCGGACAAATCTTACCAATGCCTGAAAGAGACCTTCGAGAAGTTGGGCTATCAGTGGAAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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| CDS GCA 72 bp | ACAGTCTATGGCCCGCTTCATGTCTACAATTTTCACTaGAACAGCTTCTTCAGTTATTCTATTCACAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: TVYGPLHVYNFH*NSFFSYSIHSK Trigger: CTTGCTGTGAATAGAATAACTGAAGAAGCTGTTGCAGTGAAAATTGTAGACATGAAGCGGGCCATAGACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000172742.2 ENSMUST00000173963.9 |
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| CDS CAA 72 bp | CTGATAGCCCAACTTCTCGAAGGTCTCTTTCAGGCATaGGTAAGATTTGTCCGCATCCAATTTAGTAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: LIAQLLEGLFQA*VRFVRIQFSKE Trigger: TTCTTTACTAAATTGGATGCGGACAAATCTTACCAATGCCTGAAAGAGACCTTCGAGAAGTTGGGCTATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034625.12 ENSMUST00000172702.9 ENSMUST00000173963.9 |
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