RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHD9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056608

Ensembl transcript IDs: ENSMUST00000048665.8, ENSMUST00000109614.9, ENSMUST00000209203.2, ENSMUST00000209423.2, ENSMUST00000210947.2, ENSMUST00000211403.2

Found 971 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCAGCAAAGGGTTGCCTGGCACACTGCCAGCAGGAACCGCTGCTaGTGTGGTAGCCTTGGCAATTCCACTTTTAGGCCTTCTCCCCCG +
Preference number: 1 (lower is better)
Translates to: GQQRVAWHTASRNRC*CGSLGNSTFRPSPP
Trigger: CGGGGGAGAAGGCCTAAAAGTGGAATTGCCAAGGCTACCACAGCAGCAGCGGTTCCTGCTGGCAGTGTGCCAGGCAACCCTTTGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CCA 90 bp GAGATCCACGCCTGGAAGCAATCCATTGGCCAGCAAAGGGTTGCCTaGCACACTGCCAGCAGGAACCGCTGCTGCTGTGGTAGCCTTGGC +
Preference number: 1 (lower is better)
Translates to: EIHAWKQSIGQQRVA*HTASRNRCCCGSLG
Trigger: GCCAAGGCTACCACAGCAGCAGCGGTTCCTGCTGGCAGTGTGCCAGGCAACCCTTTGCTGGCCAATGGATTGCTTCCAGGCGTGGATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 90 bp ATTGGCCAGCAAAGGGTTGCCTGGCACACTGCCAGCAGGAACCGCTaGTGCTGTGGTAGCCTTGGCAATTCCACTTTTAGGCCTTCTCCC +
Preference number: 1 (lower is better)
Translates to: IGQQRVAWHTASRNR*CCGSLGNSTFRPSP
Trigger: GGGAGAAGGCCTAAAAGTGGAATTGCCAAGGCTACCACAGCAGCAGCGGTTCCTGCTGGCAGTGTGCCAGGCAACCCTTTGCTGGCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 90 bp ATAGGCTGGCTGTCGAGTATCGCTCCGTTGGCACCGAGGGTTGGCTaGATGGAAGTACCTGACGCTGGCACAGCTTTGGGGAGGTTAACA +
Preference number: 1 (lower is better)
Translates to: IGWLSSIAPLAPRVG*MEVPDAGTALGRLT
Trigger: TGTTAACCTCCCCAAAGCTGTGCCAGCGTCAGGTACTTCCATTCAGCCAACCCTCGGTGCCAACGGAGCGATACTCGACAGCCAGCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CCA 90 bp GAGAGTGTGAGCAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGATCTaGAAGAACACGATGAGCGCGCAGAGTCAGAGTCAGAATCAGAGC +
Preference number: 1 (lower is better)
Translates to: ESVSRRRRRRRRKRI*KNTMSAQSQSQNQS
Trigger: GCTCTGATTCTGACTCTGACTCTGCGCGCTCATCGTGTTCTTCCAGATCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTGCTCACACTCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 90 bp AGACAGCAACAGTGGGTTAAGAGCTATGGGCTTGGCAGCTGCAGCTaGACTCAATGCAGCCGTGGAGGAAGTCGAAGGAGAACCTGGCAC +
Preference number: 1 (lower is better)
Translates to: RQQQWVKSYGLGSCS*TQCSRGGSRRRTWH
Trigger: GTGCCAGGTTCTCCTTCGACTTCCTCCACGGCTGCATTGAGTTCAGCTGCAGCTGCCAAGCCCATAGCTCTTAACCCACTGTTGCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 90 bp TTTCTTCCGCCCCAGACTCTGCAGTCTTTGACAGGAGTCCTCCCATaGCTAGCAGATTTGGTAACCCGGCCATTCCTGAGAACAGCATGG +
Preference number: 1 (lower is better)
Translates to: FLPPQTLQSLTGVLP*LADLVTRPFLRTAW
Trigger: CCATGCTGTTCTCAGGAATGGCCGGGTTACCAAATCTGCTAGGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTGGGGCGGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 90 bp GTCACTTGCAGCGACTGCAGGTTCTGCAGATTTTGTTGTAAGGCCTaGAGAGCTGTGAGATCCACGCCTGGAAGCAATCCATTGGCCAGC +
Preference number: 1 (lower is better)
Translates to: VTCSDCRFCRFCCKA*RAVRSTPGSNPLAS
Trigger: GCTGGCCAATGGATTGCTTCCAGGCGTGGATCTCACAGCTCTTCAGGCCTTACAACAAAATCTGCAGAACCTGCAGTCGCTGCAAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 90 bp GTTTGCCTGGAAACTGTCCTGAGTTTCATCTTGGGTCGTGCTCAGTaGTGCGACACTTTCCTCATCATAGGCTTTCCTGTGAGGCGTGCC +
Preference number: 1 (lower is better)
Translates to: VCLETVLSFILGRAQ*CDTFLIIGFPVRRA
Trigger: GGCACGCCTCACAGGAAAGCCTATGATGAGGAAAGTGTCGCATCACTGAGCACGACCCAAGATGAAACTCAGGACAGTTTCCAGGCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 90 bp AAAACCAGTTCAGGAGGAGGTTGCAGAGCCCCAGTCAGTCTTCATTaGTCGAGTCTGAGTCCTCGGAGGATGAAGATGAGCTATCAGACC +
Preference number: 1 (lower is better)
Translates to: KTSSGGGCRAPVSLH*SSLSPRRMKMSYQT
Trigger: GGTCTGATAGCTCATCTTCATCCTCCGAGGACTCAGACTCGAGCAATGAAGACTGACTGGGGCTCTGCAACCTCCTCCTGAACTGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 90 bp CTTAAGCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTaGGAGCCTTGTCCCGTCTTTGAGATTAATAACTGGAACAGGACT +
Preference number: 1 (lower is better)
Translates to: LKPSVQVLSLRRIIS*EPCPVFEINNWNRT
Trigger: AGTCCTGTTCCAGTTATTAATCTCAAAGACGGGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGCTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 90 bp GCAAATGCGCCTCCAACCTTTCTCGCATTCCTTCTGTTAATCAGCTaGACGCGCTCCTCCCCAGTCAGACTGTTGATATCTAGTTTGTTT +
Preference number: 1 (lower is better)
Translates to: ANAPPTFLAFLLLIS*TRSSPVRLLISSLF
Trigger: AAACAAACTAGATATCAACAGTCTGACTGGGGAGGAGCGCGTGCAGCTGATTAACAGAAGGAATGCGAGAAAGGTTGGAGGCGCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 90 bp TCTGGATTTGGATGGCAAAGCTTCAAGCGTTCAAACAACTGTGGGTaGCGAAGGGCCTGCTCCCGTACTTTTCTTAGAAGTTCAATGCGA +
Preference number: 1 (lower is better)
Translates to: SGFGWQSFKRSNNCG*RRACSRTFLRSSMR
Trigger: TCGCATTGAACTTCTAAGAAAAGTACGGGAGCAGGCCCTTCGTCACCCACAGTTGTTTGAACGCTTGAAGCTTTGCCATCCAAATCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 90 bp GGTATAGAAGGACGCCACCGTGTTAGCATCATAATGTCTTCTAGCTaGCGGCCACTTCCCTTTCAGAACTGTCTGACAAATACTGTCCAG +
Preference number: 1 (lower is better)
Translates to: GIEGRHRVSIIMSSS*RPLPFQNCLTNTVQ
Trigger: CTGGACAGTATTTGTCAGACAGTTCTGAAAGGGAAGTGGCCGTCAGCTAGAAGACATTATGATGCTAACACGGTGGCGTCCTTCTATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 90 bp TTCCATTGTTTGCCTGGAAACTGTCCTGAGTTTCATCTTGGGTCGTaGTCAGTGATGCGACACTTTCCTCATCATAGGCTTTCCTGTGAG +
Preference number: 1 (lower is better)
Translates to: FHCLPGNCPEFHLGS*SVMRHFPHHRLSCE
Trigger: CTCACAGGAAAGCCTATGATGAGGAAAGTGTCGCATCACTGAGCACGACCCAAGATGAAACTCAGGACAGTTTCCAGGCAAACAATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 90 bp AGGACTCTCTGTGTCAGGAATTCTTTGAGGCTGAGGATAGGACAGTaGTGGGTTCATCCCGGTGGGAATATGATTAGGTGGCTTATTTCT +
Preference number: 1 (lower is better)
Translates to: RTLCVRNSLRLRIGQ*WVHPGGNMIRWLIS
Trigger: AGAAATAAGCCACCTAATCATATTCCCACCGGGATGAACCCAGCACTGTCCTATCCTCAGCCTCAAAGAATTCCTGACACAGAGAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CCA 90 bp GCTGCAACCATGCGTCTGTCTGTTTCACTTTTCCCACCAGACTTCTaGTCTCCAGTAGCCTGTGATAAAACACCGTTCTTTGGACTTACA +
Preference number: 1 (lower is better)
Translates to: AATMRLSVSLFPPDF*SPVACDKTPFFGLT
Trigger: TGTAAGTCCAAAGAACGGTGTTTTATCACAGGCTACTGGAGACCAGAAGTCTGGTGGGAAAAGTGAAACAGACAGACGCATGGTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CCA 90 bp CAAGGTTGGAAGATGAAGATTAAGGCCTGGAGTGAGCAGCATCCCTaGGTAAAGTATGTTAGACAGCAACAGTGGGTTAAGAGCTATGGG +
Preference number: 1 (lower is better)
Translates to: QGWKMKIKAWSEQHP*VKYVRQQQWVKSYG
Trigger: CCCATAGCTCTTAACCCACTGTTGCTGTCTAACATACTTTACCCAGGGATGCTGCTCACTCCAGGCCTTAATCTTCATCTTCCAACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CCA 90 bp ACTCTCTGTGTCAGGAATTCTTTGAGGCTGAGGATAGGACAGTGCTaGGTTCATCCCGGTGGGAATATGATTAGGTGGCTTATTTCTGTT +
Preference number: 1 (lower is better)
Translates to: TLCVRNSLRLRIGQC*VHPGGNMIRWLISV
Trigger: AACAGAAATAAGCCACCTAATCATATTCCCACCGGGATGAACCCAGCACTGTCCTATCCTCAGCCTCAAAGAATTCCTGACACAGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CCA 90 bp AAAAGCATTGGACTGAGACAAGGTTGGAAGATGAAGATTAAGGCCTaGAGTGAGCAGCATCCCTGGGTAAAGTATGTTAGACAGCAACAG +
Preference number: 1 (lower is better)
Translates to: KSIGLRQGWKMKIKA*SEQHPWVKYVRQQQ
Trigger: CTGTTGCTGTCTAACATACTTTACCCAGGGATGCTGCTCACTCCAGGCCTTAATCTTCATCTTCCAACCTTGTCTCAGTCCAATGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 90 bp CTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCGTTTCATaGGTTTGCCTTTCTGAACCCTGGAAACAAGACATTATTCATCTG +
Preference number: 1 (lower is better)
Translates to: LYVKGAVFKVLSGVS*VCLSEPWKQDIIHL
Trigger: CAGATGAATAATGTCTTGTTTCCAGGGTTCAGAAAGGCAAACTCATGAAACGCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR CCA 90 bp CGTGTCCTTGTTTCCATAGAAGACATAGATTCTTCTTCAGAGGACTaGGGCTCTTCTGTGAGGCTTTCACTCTTAACTTTCATATCCTCT +
Preference number: 1 (lower is better)
Translates to: RVLVSIEDIDSSSED*GSSVRLSLLTFISS
Trigger: AGAGGATATGAAAGTTAAGAGTGAAAGCCTCACAGAAGAGCCCCAGTCCTCTGAAGAAGAATCTATGTCTTCTATGGAAACAAGGACACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 90 bp ACCTATACAAATAAAGCAAACACACACTTTCCTGTACGTGAAGGGTaGTGTGTTCAAAGTTCTCAGTGGCGTTTCATGAGTTTGCCTTTC +
Preference number: 1 (lower is better)
Translates to: TYTNKANTHFPVREG*CVQSSQWRFMSLPF
Trigger: GAAAGGCAAACTCATGAAACGCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTGCTTTATTTGTATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR TCA 90 bp AACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAACTTTAGCATaGTTGAGACACGAGGAAAATGCTAAGATTTACCTCTCCTTAGAA +
Preference number: 1 (lower is better)
Translates to: NWGTPPKFTTLQTLA*LRHEENAKIYLSLE
Trigger: TTCTAAGGAGAGGTAAATCTTAGCATTTTCCTCGTGTCTCAATCATGCTAAAGTTTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR GCA 90 bp TTCTTCTTTAAAACATACTTGTACCTGAATTGGAGACGTGAGCAGTaGATCGTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGT +
Preference number: 1 (lower is better)
Translates to: FFFKTYLYLNWRREQ*IVTLERCHVIKAMG
Trigger: ACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGTTTTAAAGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR CCA 90 bp GATTGGGAAACTTACTTCTTCTTTAAAACATACTTGTACCTGAATTaGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTA +
Preference number: 1 (lower is better)
Translates to: DWETYFFFKTYLYLN*RREQCIVTLERCHV
Trigger: TACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGTTTTAAAGAAGAAGTAAGTTTCCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR TCA 90 bp CATGATGAAGGATTACTACCCACTGCTCCTGGATGGGCATTACAGTaGCTATTGCTAAGACATTGCATAAAGAACTATCAATTCAAAGTA +
Preference number: 1 (lower is better)
Translates to: HDEGLLPTAPGWALQ*LLLRHCIKNYQFKV
Trigger: TACTTTGAATTGATAGTTCTTTATGCAATGTCTTAGCAATAGTCACTGTAATGCCCATCCAGGAGCAGTGGGTAGTAATCCTTCATCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR CCA 90 bp GGGTGTGGGGACGCTGGGCTCGCCGCGTTCTGTAGCTGCTCCGGGGCTATCCAGTTAGGGGCTCTGTTCTaGCTGCAACCATGCGTCTGT +
Preference number: 2 (lower is better)
Translates to: GCGDAGLAAFCSCSGAIQLGALF*LQPCVC
Trigger: ACAGACGCATGGTTGCAGCCAGAACAGAGCCCCTAA...CTGGATAGCCCCGGAGCAGCTACAGAACGCGGCGAGCCCAGCGTCCCCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCTGGGGCAGAAGTCCTTaGGTGAGCCGCCTTACTCTG +
Preference number: 2 (lower is better)
Translates to: AICPGPFSSAHHLLRALSWGRSP*VSRLTL
Trigger: CAGAGTAAGGCGGCTCACTCAAGGACTTCTGCCCCA...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp AGAGAAGGCAAAACCAGTTCAGGAGGAGGTTGCAGAGCCCCAGTCAGTCTTCATGGTAGTCGGTCCGGCTaGCCCCATGTTTGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: REGKTSSGGGCRAPVSLHGSRSG*PHVWQH
Trigger: GTGCTGCCAAACATGGGGTCAGCCGGACCGACTACC...ATGAAGACTGACTGGGGCTCTGCAACCTCCTCCTGAACTGGTTTTGCCTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR GCA 90 bp CTCCTCCTTCCCCGCCTTTTCTTCACTATAGGCTGGCTGTCGAGTATCGCTCCGGGGCTCTGTTCTGGCTaGAACCATGCGTCTGTCTGT +
Preference number: 2 (lower is better)
Translates to: LLLPRLFFTIGWLSSIAPGLCSG*NHASVC
Trigger: ACAGACAGACGCATGGTTGCAGCCAGAACAGAGCCC...CGGAGCGATACTCGACAGCCAGCCTATAGTGAAGAAAAGGCGGGGAAGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CAA 90 bp TCGAGTCATTTCCTCGCTTTTCTTCCGCCCCAGACTCTGCAGTCTTaGACAGGAGTCCTCCCATGCCTAGCAGATTTGGTAACCCGGCCA +
Preference number: 2 (lower is better)
Translates to: SSHFLAFLPPQTLQS*TGVLPCLADLVTRP
Trigger: TGGCCGGGTTACCAAATCTGCTAGGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTGGGGCGGAAGAAAAGCGAGGAAATGACTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp AGAGAAGGCAAAACCAGTTCAGGAGGAGGTTGCAGAGCCCCAGTCAGTCTTCATTCAAACAACTGTGGGTaGCGAAGGGCCTGCTCCCGT +
Preference number: 2 (lower is better)
Translates to: REGKTSSGGGCRAPVSLHSNNCG*RRACSR
Trigger: ACGGGAGCAGGCCCTTCGTCACCCACAGTTGTTTGA...ATGAAGACTGACTGGGGCTCTGCAACCTCCTCCTGAACTGGTTTTGCCTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp CCGCCCCAGACTCTGCAGTCTTTGACAGGAGTCCTCCCATGCCTAGCAGATTTGGTTTGGCAGCACCAATaGGCAAATCCCTATCATGAG +
Preference number: 2 (lower is better)
Translates to: PPQTLQSLTGVLPCLADLVWQHQ*ANPYHE
Trigger: CTCATGATAGGGATTTGCTCATTGGTGCTGCCAAAC...CAAATCTGCTAGGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTGGGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCAGTCAGAATCAGAGCTaGACTGGGATCCTCTTTTGT +
Preference number: 2 (lower is better)
Translates to: AICPGPFSSAHHLLRALSSQNQS*TGILFC
Trigger: ACAAAAGAGGATCCCAGTCCAGCTCTGATTCTGACT...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CAA 90 bp CAAAACCAGTTCAGGAGGAGGTTGCAGAGCCCCAGTCAGTCTTCATaGCTCGAGTCTGAGTCCTCGGAGGATGAAGATGAGCTATCAGAC +
Preference number: 2 (lower is better)
Translates to: QNQFRRRLQSPSQSS*LESESSEDEDELSD
Trigger: GTCTGATAGCTCATCTTCATCCTCCGAGGACTCAGACTCGAGCAATGAAGACTGACTGGGGCTCTGCAACCTCCTCCTGAACTGGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp GCCGAAGAACAAGATGAGGATGACGAAGAGCTAGAGCCTGACCGAGAGTGTGAGCGGTCCTGGCCAAATTaGCATGATAGAGAGGATGTG +
Preference number: 2 (lower is better)
Translates to: AEEQDEDDEELEPDRECERSWPN*HDREDV
Trigger: CACATCCTCTCTATCATGTCAATTTGGCCAGGACCG...CTCACACTCTCGGTCAGGCTCTAGCTCTTCGTCATCCTCATCTTGTTCTTCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR GCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCAGTGCTACTTGGTATTaGTGTAAAAGTGGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: AICPGPFSSAHHLLRALSSATWY*CKSGAE
Trigger: TTCTGCCCCACTTTTACAGCAATACCAAGTAGCACT...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CAA 90 bp ATCAGCTGCACGCGCTCCTCCCCAGTCAGACTGTTGATATCTAGTTaGTTTGGGTTTCGGCATCGATGCCTTTTCTGTTTGGGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: ISCTRSSPVRLLISS*FGFRHRCLFCLGLP
Trigger: GGGAAGACCCAAACAGAAAAGGCATCGATGCCGAAACCCAAACAAACTAGATATCAACAGTCTGACTGGGGAGGAGCGCGTGCAGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCCATGCAAAACATCTCTaGAAGCAGTTTGCACTTCTA +
Preference number: 2 (lower is better)
Translates to: AICPGPFSSAHHLLRALSHAKHL*KQFALL
Trigger: TAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATG...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp CGGTTGATCATTACCCGGTCCTTTGGCCAATATGAGGCTGCCAGCATATATCCATTGGGTCGTGCTCAGTaGTGCGACACTTTCCTCATC +
Preference number: 2 (lower is better)
Translates to: RLIITRSFGQYEAASIYPLGRAQ*CDTFLI
Trigger: GATGAGGAAAGTGTCGCATCACTGAGCACGACCCAA...TGGATATATGCTGGCAGCCTCATATTGGCCAAAGGACCGGGTAATGATCAACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp CATAAGTCTTTCAAAGGAGGAGCAAATGCGCCTCCAACCTTTCTCGCATTCCTTGCACCGAGGGTTGGCTaGATGGAAGTACCTGACGCT +
Preference number: 2 (lower is better)
Translates to: HKSFKGGANAPPTFLAFLAPRVG*MEVPDA
Trigger: AGCGTCAGGTACTTCCATTCAGCCAACCCTCGGTGC...AAGGAATGCGAGAAAGGTTGGAGGCGCATTTGCTCCTCCTTTGAAAGACTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGACTCAGTGGCGTTTCATaGGTTTGCCTTTCTGAACCC +
Preference number: 2 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGLSGVS*VCLSEP
Trigger: GGGTTCAGAAAGGCAAACTCATGAAACGCCACTGAG...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR TCA 90 bp TTCTGGAAGAAACCCAGACTGTTTAACAACATCTCCCCATTCAGGAGCCACTCCGCCTGGAAACTGTCCTaGGTTTCATCTTGGGTCGTG +
Preference number: 2 (lower is better)
Translates to: FWKKPRLFNNISPFRSHSAWKLS*VSSWVV
Trigger: CACGACCCAAGATGAAACTCAGGACAGTTTCCAGGC...GGAGTGGCTCCTGAATGGGGAGATGTTGTTAAACAGTCTGGGTTTCTTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR GCA 90 bp CATAAGTCTTTCAAAGGAGGAGCAAATGCGCCTCCAACCTTTCTCGCATTCCTTTTGGGTCTTCCCTCGTaGAGCTGCACCCTTGGGATA +
Preference number: 2 (lower is better)
Translates to: HKSFKGGANAPPTFLAFLLGLPS*SCTLGI
Trigger: TATCCCAAGGGTGCAGCTGCACGAGGGAAGACCCAA...AAGGAATGCGAGAAAGGTTGGAGGCGCATTTGCTCCTCCTTTGAAAGACTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CAA 90 bp CAGAAAGTGCTACTTGGTATTGCTGTAAAAGTGGGGCAGAAGTCCTaGAGTGAGCCGCCTTACTCTGATTGTAGTTCCTCTGAGCTGCCA +
Preference number: 2 (lower is better)
Translates to: QKVLLGIAVKVGQKS*SEPPYSDCSSSELP
Trigger: TGGCAGCTCAGAGGAACTACAATCAGAGTAAGGCGGCTCACTCAAGGACTTCTGCCCCACTTTTACAGCAATACCAAGTAGCACTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CAA 90 bp TATATCCACCTTGTAGCAGGTAAGCAGACTCTGGCGTTCCATTGTTaGCCTGGAAACTGTCCTGAGTTTCATCTTGGGTCGTGCTCAGTG +
Preference number: 2 (lower is better)
Translates to: YIHLVAGKQTLAFHC*PGNCPEFHLGSCSV
Trigger: CACTGAGCACGACCCAAGATGAAACTCAGGACAGTTTCCAGGCAAACAATGGAACGCCAGAGTCTGCTTACCTGCTACAAGGTGGATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp GCCGAAGAACAAGATGAGGATGACGAAGAGCTAGAGCCTGACCGAGAGTGTGAGAAACATACTTGTACCTaGATTGGAGACGTGAGCAGT +
Preference number: 2 (lower is better)
Translates to: AEEQDEDDEELEPDRECEKHTCT*IGDVSS
Trigger: ACTGCTCACGTCTCCAATTCAGGTACAAGTATGTTT...CTCACACTCTCGGTCAGGCTCTAGCTCTTCGTCATCCTCATCTTGTTCTTCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCCGGTCCTGGCCAAATTaGCATGATAGAGAGGATGTG +
Preference number: 2 (lower is better)
Translates to: KQGVDHKATPAITLSGTTRSWPN*HDREDV
Trigger: CACATCCTCTCTATCATGTCAATTTGGCCAGGACCG...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR CAA 90 bp TCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCCGTCTTaGAGATTAATAACTGGAACAGGACTCTCTGTGTCAGGAATTCTT +
Preference number: 2 (lower is better)
Translates to: SFLFGASSPASLVPS*RLITGTGLSVSGIL
Trigger: AAGAATTCCTGACACAGAGAGTCCTGTTCCAGTTATTAATCTCAAAGACGGGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CAA 90 bp TTCCTTCTGTTAATCAGCTGCACGCGCTCCTCCCCAGTCAGACTGTaGATATCTAGTTTGTTTGGGTTTCGGCATCGATGCCTTTTCTGT +
Preference number: 2 (lower is better)
Translates to: FLLLISCTRSSPVRL*ISSLFGFRHRCLFC
Trigger: ACAGAAAAGGCATCGATGCCGAAACCCAAACAAACTAGATATCAACAGTCTGACTGGGGAGGAGCGCGTGCAGCTGATTAACAGAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAAGGCTACAGCTTTCATaGCATTCATTAGCTGCCCAA +
Preference number: 2 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGRLQLS*HSLAAQ
Trigger: TTGGGCAGCTAATGAATGTCATGAAAGCTGTAGCCT...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR TCA 90 bp AAGCCCCTGCTTCTGAAATGTCAACTTCAAGCCACCTTCGTCTTTGATTTTCACAGCAAATCCCTATCATaGGAGCCACACTCCCACCAG +
Preference number: 2 (lower is better)
Translates to: KPLLLKCQLQATFVFDFHSKSLS*EPHSHQ
Trigger: CTGGTGGGAGTGTGGCTCTCATGATAGGGATTTGCT...GTGAAAATCAAAGACGAAGGTGGCTTGAAGTTGACATTTCAGAAGCAGGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGTAGTTCCTCTGAGCTaGCATAAACGAGAGTTCAGG +
Preference number: 2 (lower is better)
Translates to: YLYLNWRREQCIVTLERCVVPLS*HKREFR
Trigger: CCTGAACTCTCGTTTATGGCAGCTCAGAGGAACTAC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CCA 90 bp GCCGAAGAACAAGATGAGGATGACGAAGAGCTAGAGCCTGACCGAGAGTGTGAGGGTAGCCAGATAAATTaGCTGATTGGGAAACTTACT +
Preference number: 2 (lower is better)
Translates to: AEEQDEDDEELEPDRECEGSQIN*LIGKLT
Trigger: AGTAAGTTTCCCAATCAGCCAATTTATCTGGCTACC...CTCACACTCTCGGTCAGGCTCTAGCTCTTCGTCATCCTCATCTTGTTCTTCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CCA 90 bp AGAGAAGGCAAAACCAGTTCAGGAGGAGGTTGCAGAGCCCCAGTCAGTCTTCATAAGTCTGGATTTGGATaGCAAAGCTTCAAGCGTTCA +
Preference number: 2 (lower is better)
Translates to: REGKTSSGGGCRAPVSLHKSGFG*QSFKRS
Trigger: TGAACGCTTGAAGCTTTGCCATCCAAATCCAGACTT...ATGAAGACTGACTGGGGCTCTGCAACCTCCTCCTGAACTGGTTTTGCCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAACGGTCCTGGCCAAATTaGCATGATAGAGAGGATGTG +
Preference number: 2 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQRSWPN*HDREDV
Trigger: CACATCCTCTCTATCATGTCAATTTGGCCAGGACCG...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR GCA 90 bp TCCTTCGAGTCATTTCCTCGCTTTTCTTCCGCCCCAGACTCTGCAGTCTTTGACTCCTTTTCTCGTACATaGTTCTTCACCTTTGACATC +
Preference number: 2 (lower is better)
Translates to: SFESFPRFSSAPDSAVFDSFSRT*FFTFDI
Trigger: GATGTCAAAGGTGAAGAAGCATGTACGAGAAAAGGA...GTCAAAGACTGCAGAGTCTGGGGCGGAAGAAAAGCGAGGAAATGACTCGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCTACTTGTACCTGAATTaGAGACGTGAGCAGTGCATC +
Preference number: 2 (lower is better)
Translates to: KQGVDHKATPAITLSGTTYLYLN*RREQCI
Trigger: GATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR CCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCCCCATAGGAAAGAACTaGGGTACTCCTCCCAAATTT +
Preference number: 2 (lower is better)
Translates to: KQGVDHKATPAITLSGTTPIGKN*GTPPKF
Trigger: AAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGG...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR CCA 90 bp AAGCCCCTGCTTCTGAAATGTCAACTTCAAGCCACCTTCGTCTTTGATTTTCACTTCCCACCAGACTTCTaGTCTCCAGTAGCCTGTGAT +
Preference number: 2 (lower is better)
Translates to: KPLLLKCQLQATFVFDFHFPPDF*SPVACD
Trigger: ATCACAGGCTACTGGAGACCAGAAGTCTGGTGGGAA...GTGAAAATCAAAGACGAAGGTGGCTTGAAGTTGACATTTCAGAAGCAGGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCCTGTCAGTAAGTTATTaGTGCACTCAACACTGGGAT +
Preference number: 2 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGLSVSY*CTQHWD
Trigger: ATCCCAGTGTTGAGTGCATCAATAACTTACTGACAG...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGACATGCAAAACATCTCTaGAAGCAGTTTGCACTTCTA +
Preference number: 2 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGHAKHL*KQFALL
Trigger: TAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATG...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR GCA 90 bp GCCGAAGAACAAGATGAGGATGACGAAGAGCTAGAGCCTGACCGAGAGTGTGAGTCTCTGAAAGCAGTTTaGACTTCTAAACAAACAACT +
Preference number: 2 (lower is better)
Translates to: AEEQDEDDEELEPDRECESLKAV*TSKQTT
Trigger: AGTTGTTTGTTTAGAAGTGCAAACTGCTTTCAGAGA...CTCACACTCTCGGTCAGGCTCTAGCTCTTCGTCATCCTCATCTTGTTCTTCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTGCGTTCAAACAACTGTaGGTGACGAAGGGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: QKRMDLKKEDMQNISESSAFKQL*VTKGLL
Trigger: GAGCAGGCCCTTCGTCACCCACAGTTGTTTGAACGC...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTCATGCAAAACATCTCTaGAAGCAGTTTGCACTTCTA +
Preference number: 2 (lower is better)
Translates to: TYLYLNWRREQCIVTLERHAKHL*KQFALL
Trigger: TAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATG...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR-3UTR CCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATACTACCCACTGCTCCTaGATGGGCATTACAGTGACT +
Preference number: 2 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYTTHCS*MGITVT
Trigger: AGTCACTGTAATGCCCATCCAGGAGCAGTGGGTAGT...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR TCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTAAGGCTACAGCTTTCATaGCATTCATTAGCTGCCCAA +
Preference number: 2 (lower is better)
Translates to: QNASHGPGQIDMIERMCLRLQLS*HSLAAQ
Trigger: TTGGGCAGCTAATGAATGTCATGAAAGCTGTAGCCT...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAAAACATACTTGTACCTaGATTGGAGACGTGAGCAGT +
Preference number: 2 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQKHTCT*IGDVSS
Trigger: ACTGCTCACGTCTCCAATTCAGGTACAAGTATGTTT...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR GCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAATTAATTTCAGCAAAATaGAAGTCACGGTCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQLISAK*KSRSWP
Trigger: TGGCCAGGACCGTGACTTGCATTTTGCTGAAATTAA...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGAGTTCAGAAACGTATaGATCTTAAGAAAGAGGACA +
Preference number: 2 (lower is better)
Translates to: TYLYLNWRREQCIVTLEREFRNV*ILRKRT
Trigger: TGTCCTCTTTCTTAAGATCCATACGTTTCTGAACTC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR-3UTR CCA 90 bp TTCTGGAAGAAACCCAGACTGTTTAACAACATCTCCCCATTCAGGAGCCACTCCGAGTTCAGAAACGTATaGATCTTAAGAAAGAGGACA +
Preference number: 2 (lower is better)
Translates to: FWKKPRLFNNISPFRSHSEFRNV*ILRKRT
Trigger: TGTCCTCTTTCTTAAGATCCATACGTTTCTGAACTC...GGAGTGGCTCCTGAATGGGGAGATGTTGTTAAACAGTCTGGGTTTCTTCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGAGTTCAGAAACGTATaGATCTTAAGAAAGAGGACA +
Preference number: 2 (lower is better)
Translates to: YLYLNWRREQCIVTLERCEFRNV*ILRKRT
Trigger: TGTCCTCTTTCTTAAGATCCATACGTTTCTGAACTC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR-3UTR CCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCTGCCTTTCTGAACCCTaGAAACAAGACATTATTCAT +
Preference number: 2 (lower is better)
Translates to: KQGVDHKATPAITLSGTTCLSEP*KQDIIH
Trigger: ATGAATAATGTCTTGTTTCCAGGGTTCAGAAAGGCA...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR CCA 90 bp AAGCCCCTGCTTCTGAAATGTCAACTTCAAGCCACCTTCGTCTTTGATTTTCACTGGGATCCTCTTTTGTaGACTCTCGGTTTCTTAGAA +
Preference number: 2 (lower is better)
Translates to: KPLLLKCQLQATFVFDFHWDPLL*TLGFLE
Trigger: TTCTAAGAAACCGAGAGTCCACAAAAGAGGATCCCA...GTGAAAATCAAAGACGAAGGTGGCTTGAAGTTGACATTTCAGAAGCAGGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAACGAGGGTTGGCTGAATaGAAGTACCTGACGCTGGCA +
Preference number: 2 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKRGLAE*KYLTLA
Trigger: TGCCAGCGTCAGGTACTTCCATTCAGCCAACCCTCG...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAAACAAGGCTAGTCTCTaGTGTGCTCTGAAGCTCCCG +
Preference number: 2 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKNKASL*CALKLP
Trigger: CGGGAGCTTCAGAGCACATCAGAGACTAGCCTTGTT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CAA 90 bp GATAAATTGGCTGATTGGGAAACTTACTTCTTCTTTAAAACATACTaGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAG +
Preference number: 2 (lower is better)
Translates to: DKLADWETYFFFKTY*YLNWRREQCIVTLE
Trigger: CTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGTTTTAAAGAAGAAGTAAGTTTCCCAATCAGCCAATTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR-3UTR GCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAATGGCGTTCCATTGTTTaGCTGGAAACTGTCCTGAGT +
Preference number: 2 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKWRSIV*LETVLS
Trigger: ACTCAGGACAGTTTCCAGGCAAACAATGGAACGCCA...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTAGAGTTCAGAAACGTATaGATCTTAAGAAAGAGGACA +
Preference number: 2 (lower is better)
Translates to: QNASHGPGQIDMIERMCLEFRNV*ILRKRT
Trigger: TGTCCTCTTTCTTAAGATCCATACGTTTCTGAACTC...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR CCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATTATGAAGGTAAACCTTaGACCTCTACCTTGTCAGAA +
Preference number: 2 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYYEGKP*TSTLSE
Trigger: TTCTGACAAGGTAGAGGTCCAAGGTTTACCTTCATA...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAAGGCTACAGCTTTCATaGCATTCATTAGCTGCCCAA +
Preference number: 2 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKRLQLS*HSLAAQ
Trigger: TTGGGCAGCTAATGAATGTCATGAAAGCTGTAGCCT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAATCACAACGGGACCAGTaGGAATACGTTCAAACATAC +
Preference number: 2 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKSQRDQ*EYVQTY
Trigger: GTATGTTTGAACGTATTCTCACTGGTCCCGTTGTGA...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAATCTCTGAAAGCAGTTTaGACTTCTAAACAAACAACT +
Preference number: 2 (lower is better)
Translates to: NWRREQCIVTLERCHVIKSLKAV*TSKQTT
Trigger: AGTTGTTTGTTTAGAAGTGCAAACTGCTTTCAGAGA...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR-3UTR CCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATTGCCTTTCTGAACCCTaGAAACAAGACATTATTCAT +
Preference number: 2 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYCLSEP*KQDIIH
Trigger: ATGAATAATGTCTTGTTTCCAGGGTTCAGAAAGGCA...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAACTGTCAGTAAGTTATTaGTGCACTCAACACTGGGAT +
Preference number: 2 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKLSVSY*CTQHWD
Trigger: ATCCCAGTGTTGAGTGCATCAATAACTTACTGACAG...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAGTTCAAAGTTCTCAGTaGCGTTTCATGAGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKVQSSQ*RFMSLP
Trigger: AGGCAAACTCATGAAACGCCACTGAGAACTTTGAAC...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAGGTAGCCAGATAAATTaGCTGATTGGGAAACTTACT +
Preference number: 2 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKGSQIN*LIGKLT
Trigger: AGTAAGTTTCCCAATCAGCCAATTTATCTGGCTACC...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR CAA 90 bp CAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTACATCATTTaGAGATTAGTCAAAGTGCATTTTCAAAGTGGGCATATTTCAGCA +
Preference number: 2 (lower is better)
Translates to: QNRSLGLHRYNLYII*RLVKVHFQSGHISA
Trigger: TGCTGAAATATGCCCACTTTGAAAATGCACTTTGACTAATCTCAAAATGATGTACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR GCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTTCTCTGAAAGCAGTTTaGACTTCTAAACAAACAACT +
Preference number: 2 (lower is better)
Translates to: QRIVRNRTEALDFIGIICSLKAV*TSKQTT
Trigger: AGTTGTTTGTTTAGAAGTGCAAACTGCTTTCAGAGA...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR GCA 72 bp GGGTGTGGGGACGCTGGGCTCGCCGCGTTCTGTAGCTaGTCCGGGGCTATCCAGCAGTTTGGTGGTATAGAA +
Preference number: 3 (lower is better)
Translates to: GCGDAGLAAFCS*SGAIQQFGGIE
Trigger: TTCTATACCACCAAACTGCTGGATAGCCCCGGAGCAGCTACAGAACGCGGCGAGCCCAGCGTCCCCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CCA 72 bp GCCTGGAAGCAATCCATTGGCCAGCAAAGGGTTGCCTaGCACACTGCCAGCAGGAACCGCTGCTGCTGTGGT +
Preference number: 3 (lower is better)
Translates to: AWKQSIGQQRVA*HTASRNRCCCG
Trigger: ACCACAGCAGCAGCGGTTCCTGCTGGCAGTGTGCCAGGCAACCCTTTGCTGGCCAATGGATTGCTTCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp CTGTCGAGTATCGCTCCGTTGGCACCGAGGGTTGGCTaGATGGAAGTACCTGACGCTGGCACAGCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: LSSIAPLAPRVG*MEVPDAGTALG
Trigger: CCCCAAAGCTGTGCCAGCGTCAGGTACTTCCATTCAGCCAACCCTCGGTGCCAACGGAGCGATACTCGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 72 bp TCCAGAAGAGAGGCCGGCAGGCATGCCCATCAGCCCTaGAGTCACTTGCAGCGACTGCAGGTTCTGCAGATT +
Preference number: 3 (lower is better)
Translates to: SRREAGRHAHQP*SHLQRLQVLQI
Trigger: AATCTGCAGAACCTGCAGTCGCTGCAAGTGACTGCAGGGCTGATGGGCATGCCTGCCGGCCTCTCTTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CCA 72 bp CGAGTATCGCTCCGTTGGCACCGAGGGTTGGCTGAATaGAAGTACCTGACGCTGGCACAGCTTTGGGGAGGT +
Preference number: 3 (lower is better)
Translates to: RVSLRWHRGLAE*KYLTLAQLWGG
Trigger: ACCTCCCCAAAGCTGTGCCAGCGTCAGGTACTTCCATTCAGCCAACCCTCGGTGCCAACGGAGCGATACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CAA 90 bp CCGCCCCAGACTCTGCAGTCTTTGACAGGAGTCCTCCCATGCCTAGCAGATTTGCAGCCCTGCAGTCACTaGCAGCGACTGCAGGTTCTG +
Preference number: 3 (lower is better)
Translates to: PPQTLQSLTGVLPCLADLQPCSH*QRLQVL
Trigger: CAGAACCTGCAGTCGCTGCAAGTGACTGCAGGGCTG...CAAATCTGCTAGGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTGGGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CAA 90 bp GGGTGTGGGGACGCTGGGCTCGCCGCGTTCTGTAGCTGCTCCGGGGCTATCCAGATAAAACACCGTTCTTaGGACTTACAGGCTCAGATT +
Preference number: 3 (lower is better)
Translates to: GCGDAGLAAFCSCSGAIQIKHRS*DLQAQI
Trigger: AATCTGAGCCTGTAAGTCCAAAGAACGGTGTTTTAT...CTGGATAGCCCCGGAGCAGCTACAGAACGCGGCGAGCCCAGCGTCCCCACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 72 bp CGGCATCGATGCCTTTTCTGTTTGGGTCTTCCCTCGTaGAGCTGCACCCTTGGGATAAAGGCTCCGAGGTCC +
Preference number: 3 (lower is better)
Translates to: RHRCLFCLGLPS*SCTLGIKAPRS
Trigger: GGACCTCGGAGCCTTTATCCCAAGGGTGCAGCTGCACGAGGGAAGACCCAAACAGAAAAGGCATCGATGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 72 bp AGGGTTGCCTGGCACACTGCCAGCAGGAACCGCTGCTaGTGTGGTAGCCTTGGCAATTCCACTTTTAGGCCT +
Preference number: 3 (lower is better)
Translates to: RVAWHTASRNRC*CGSLGNSTFRP
Trigger: AGGCCTAAAAGTGGAATTGCCAAGGCTACCACAGCAGCAGCGGTTCCTGCTGGCAGTGTGCCAGGCAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp TCCGTTGGCACCGAGGGTTGGCTGAATGGAAGTACCTaGCGCTGGCACAGCTTTGGGGAGGTTAACAAGGCT +
Preference number: 3 (lower is better)
Translates to: SVGTEGWLNGST*RWHSFGEVNKA
Trigger: AGCCTTGTTAACCTCCCCAAAGCTGTGCCAGCGTCAGGTACTTCCATTCAGCCAACCCTCGGTGCCAACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 72 bp CGATGCCTTTTCTGTTTGGGTCTTCCCTCGTGCAGCTaGACCCTTGGGATAAAGGCTCCGAGGTCCTCCACA +
Preference number: 3 (lower is better)
Translates to: RCLFCLGLPSCS*TLGIKAPRSST
Trigger: TGTGGAGGACCTCGGAGCCTTTATCCCAAGGGTGCAGCTGCACGAGGGAAGACCCAAACAGAAAAGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 72 bp CAAAGGGTTGCCTGGCACACTGCCAGCAGGAACCGCTaGTGCTGTGGTAGCCTTGGCAATTCCACTTTTAGG +
Preference number: 3 (lower is better)
Translates to: QRVAWHTASRNR*CCGSLGNSTFR
Trigger: CCTAAAAGTGGAATTGCCAAGGCTACCACAGCAGCAGCGGTTCCTGCTGGCAGTGTGCCAGGCAACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CCA 72 bp TTCCTCCTCCTTCCCCGCCTTTTCTTCACTATAGGCTaGCTGTCGAGTATCGCTCCGTTGGCACCGAGGGTT +
Preference number: 3 (lower is better)
Translates to: FLLLPRLFFTIG*LSSIAPLAPRV
Trigger: AACCCTCGGTGCCAACGGAGCGATACTCGACAGCCAGCCTATAGTGAAGAAAAGGCGGGGAAGGAGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CAA 90 bp CCGCCCCAGACTCTGCAGTCTTTGACAGGAGTCCTCCCATGCCTAGCAGATTTGCTGGCGTTCCATTGTTaGCCTGGAAACTGTCCTGAG +
Preference number: 3 (lower is better)
Translates to: PPQTLQSLTGVLPCLADLLAFHC*PGNCPE
Trigger: CTCAGGACAGTTTCCAGGCAAACAATGGAACGCCAG...CAAATCTGCTAGGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTGGGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CAA 90 bp AGGTTGCAGAGCCCCAGTCAGTCTTCATTGCTCGAGTCTGAGTCCTCGGAGGATCAGACTCTGCAGTCTTaGACAGGAGTCCTCCCATGC +
Preference number: 3 (lower is better)
Translates to: RLQSPSQSSLLESESSEDQTLQS*TGVLPC
Trigger: GCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTG...ATCCTCCGAGGACTCAGACTCGAGCAATGAAGACTGACTGGGGCTCTGCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp CAGTGGGTTAAGAGCTATGGGCTTGGCAGCTGCAGCTaGACTCAATGCAGCCGTGGAGGAAGTCGAAGGAGA +
Preference number: 3 (lower is better)
Translates to: QWVKSYGLGSCS*TQCSRGGSRRR
Trigger: TCTCCTTCGACTTCCTCCACGGCTGCATTGAGTTCAGCTGCAGCTGCCAAGCCCATAGCTCTTAACCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 72 bp TCAGGAGGAGGTTGCAGAGCCCCAGTCAGTCTTCATTaGTCGAGTCTGAGTCCTCGGAGGATGAAGATGAGC +
Preference number: 3 (lower is better)
Translates to: SGGGCRAPVSLH*SSLSPRRMKMS
Trigger: GCTCATCTTCATCCTCCGAGGACTCAGACTCGAGCAATGAAGACTGACTGGGGCTCTGCAACCTCCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CCA 72 bp TTTCTGTTTGGGTCTTCCCTCGTGCAGCTGCACCCTTaGGATAAAGGCTCCGAGGTCCTCCACATAACCAGG +
Preference number: 3 (lower is better)
Translates to: FLFGSSLVQLHP*DKGSEVLHITR
Trigger: CCTGGTTATGTGGAGGACCTCGGAGCCTTTATCCCAAGGGTGCAGCTGCACGAGGGAAGACCCAAACAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp TGGCACAGCTTTGGGGAGGTTAACAAGGCTAGTCTCTaGTGTGCTCTGAAGCTCCCGAAGGCGAGTGAGGTA +
Preference number: 3 (lower is better)
Translates to: WHSFGEVNKASL*CALKLPKASEV
Trigger: TACCTCACTCGCCTTCGGGAGCTTCAGAGCACATCAGAGACTAGCCTTGTTAACCTCCCCAAAGCTGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 72 bp CGTACATGCTTCTTCACCTTTGACATCTGTGCTGACTaGTCGTGCTCTTCTCTGACAGCAACGGCTGGGGGT +
Preference number: 3 (lower is better)
Translates to: RTCFFTFDICAD*SCSSLTATAGG
Trigger: ACCCCCAGCCGTTGCTGTCAGAGAAGAGCACGAGCAGTCAGCACAGATGTCAAAGGTGAAGAAGCATGTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CAA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTCGGCTGACCCCATGTTaGGCAGCACCAATGAGCAAA +
Preference number: 3 (lower is better)
Translates to: VTLERCHVIKAMGGDGEARLTPC*AAPMSK
Trigger: TTTGCTCATTGGTGCTGCCAAACATGGGGTCAGCCG...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CAA 90 bp GAAGATGAGGAGGAGGAGGAGGAAGATGAGGAGGAGGAGGAAGATGCCGAAGAAGACTGGGATCCTCTTTaGTGGACTCTCGGTTTCTTA +
Preference number: 3 (lower is better)
Translates to: EDEEEEEEDEEEEEDAEEDWDPL*WTLGFL
Trigger: TAAGAAACCGAGAGTCCACAAAAGAGGATCCCAGTC...TTCTTCGGCATCTTCCTCCTCCTCCTCATCTTCCTCCTCCTCCTCCTCATCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp GACTCTGGCGTTCCATTGTTTGCCTGGAAACTGTCCTaGGTTTCATCTTGGGTCGTGCTCAGTGATGCGACA +
Preference number: 3 (lower is better)
Translates to: DSGVPLFAWKLS*VSSWVVLSDAT
Trigger: TGTCGCATCACTGAGCACGACCCAAGATGAAACTCAGGACAGTTTCCAGGCAAACAATGGAACGCCAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp CTTCTAGCTGACGGCCACTTCCCTTTCAGAACTGTCTaGCAAATACTGTCCAGGCGGTTGATCATTACCCGG +
Preference number: 3 (lower is better)
Translates to: LLADGHFPFRTV*QILSRRLIITR
Trigger: CCGGGTAATGATCAACCGCCTGGACAGTATTTGTCAGACAGTTCTGAAAGGGAAGTGGCCGTCAGCTAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp AGCGACTGCAGGTTCTGCAGATTTTGTTGTAAGGCCTaGAGAGCTGTGAGATCCACGCCTGGAAGCAATCCA +
Preference number: 3 (lower is better)
Translates to: SDCRFCRFCCKA*RAVRSTPGSNP
Trigger: TGGATTGCTTCCAGGCGTGGATCTCACAGCTCTTCAGGCCTTACAACAAAATCTGCAGAACCTGCAGTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 72 bp TCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTaGGAGCCTTGTCCCGTCTTTGAGATTAATAACTGG +
Preference number: 3 (lower is better)
Translates to: SVQVLSLRRIIS*EPCPVFEINNW
Trigger: CCAGTTATTAATCTCAAAGACGGGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 72 bp CCTCCAACCTTTCTCGCATTCCTTCTGTTAATCAGCTaGACGCGCTCCTCCCCAGTCAGACTGTTGATATCT +
Preference number: 3 (lower is better)
Translates to: PPTFLAFLLLIS*TRSSPVRLLIS
Trigger: AGATATCAACAGTCTGACTGGGGAGGAGCGCGTGCAGCTGATTAACAGAAGGAATGCGAGAAAGGTTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp GGATGGCAAAGCTTCAAGCGTTCAAACAACTGTGGGTaGCGAAGGGCCTGCTCCCGTACTTTTCTTAGAAGT +
Preference number: 3 (lower is better)
Translates to: GWQSFKRSNNCG*RRACSRTFLRS
Trigger: ACTTCTAAGAAAAGTACGGGAGCAGGCCCTTCGTCACCCACAGTTGTTTGAACGCTTGAAGCTTTGCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 72 bp GTGAGCCGCCTTACTCTGATTGTAGTTCCTCTGAGCTaGCATAAACGAGAGTTCAGGATCACGGAGAATGTG +
Preference number: 3 (lower is better)
Translates to: VSRLTLIVVPLS*HKREFRITENV
Trigger: CACATTCTCCGTGATCCTGAACTCTCGTTTATGGCAGCTCAGAGGAACTACAATCAGAGTAAGGCGGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 72 bp CGACACTTTCCTCATCATAGGCTTTCCTGTGAGGCGTaGCTCGCTTCTGGACATCTTCTTCACTGTCACTTT +
Preference number: 3 (lower is better)
Translates to: RHFPHHRLSCEA*LASGHLLHCHF
Trigger: AAAGTGACAGTGAAGAAGATGTCCAGAAGCGAGGCACGCCTCACAGGAAAGCCTATGATGAGGAAAGTGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp GAAACTGTCCTGAGTTTCATCTTGGGTCGTGCTCAGTaGTGCGACACTTTCCTCATCATAGGCTTTCCTGTG +
Preference number: 3 (lower is better)
Translates to: ETVLSFILGRAQ*CDTFLIIGFPV
Trigger: CACAGGAAAGCCTATGATGAGGAAAGTGTCGCATCACTGAGCACGACCCAAGATGAAACTCAGGACAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp CTTTCAGAACTGTCTGACAAATACTGTCCAGGCGGTTaGTCATTACCCGGTCCTTTGGCCAATATGAGGCTG +
Preference number: 3 (lower is better)
Translates to: LSELSDKYCPGG*SLPGPLANMRL
Trigger: CAGCCTCATATTGGCCAAAGGACCGGGTAATGATCAACCGCCTGGACAGTATTTGTCAGACAGTTCTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp GGACGCCACCGTGTTAGCATCATAATGTCTTCTAGCTaGCGGCCACTTCCCTTTCAGAACTGTCTGACAAAT +
Preference number: 3 (lower is better)
Translates to: GRHRVSIIMSSS*RPLPFQNCLTN
Trigger: ATTTGTCAGACAGTTCTGAAAGGGAAGTGGCCGTCAGCTAGAAGACATTATGATGCTAACACGGTGGCGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR GCA 72 bp TTGCCTGGAAACTGTCCTGAGTTTCATCTTGGGTCGTaGTCAGTGATGCGACACTTTCCTCATCATAGGCTT +
Preference number: 3 (lower is better)
Translates to: LPGNCPEFHLGS*SVMRHFPHHRL
Trigger: AAGCCTATGATGAGGAAAGTGTCGCATCACTGAGCACGACCCAAGATGAAACTCAGGACAGTTTCCAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CCA 72 bp GAGTCAGAATCAGAGCTGGACTGGGATCCTCTTTTGTaGACTCTCGGTTTCTTAGAAGCTGGGTTTGGAGTT +
Preference number: 3 (lower is better)
Translates to: ESESELDWDPLL*TLGFLEAGFGV
Trigger: AACTCCAAACCCAGCTTCTAAGAAACCGAGAGTCCACAAAAGAGGATCCCAGTCCAGCTCTGATTCTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR-3UTR CAA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTCTGTCAGTAAGTTATaGATGCACTCAACACTGGGA +
Preference number: 3 (lower is better)
Translates to: VTLERCHVIKAMGGDGEASVSKL*MHSTLG
Trigger: TCCCAGTGTTGAGTGCATCAATAACTTACTGACAGA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR CCA 72 bp GGACTGAGACAAGGTTGGAAGATGAAGATTAAGGCCTaGAGTGAGCAGCATCCCTGGGTAAAGTATGTTAGA +
Preference number: 3 (lower is better)
Translates to: GLRQGWKMKIKA*SEQHPWVKYVR
Trigger: TCTAACATACTTTACCCAGGGATGCTGCTCACTCCAGGCCTTAATCTTCATCTTCCAACCTTGTCTCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp AAGCGATGGGTGGTGACGGAGAGGCTACAGCTTTCATaGCATTCATTAGCTGCCCAAATTATTGCTGAGTTT +
Preference number: 3 (lower is better)
Translates to: KRWVVTERLQLS*HSLAAQIIAEF
Trigger: AAACTCAGCAATAATTTGGGCAGCTAATGAATGTCATGAAAGCTGTAGCCTCTCCGTCACCACCCATCGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR CCA 72 bp AAGATGAAGATTAAGGCCTGGAGTGAGCAGCATCCCTaGGTAAAGTATGTTAGACAGCAACAGTGGGTTAAG +
Preference number: 3 (lower is better)
Translates to: KMKIKAWSEQHP*VKYVRQQQWVK
Trigger: CTTAACCCACTGTTGCTGTCTAACATACTTTACCCAGGGATGCTGCTCACTCCAGGCCTTAATCTTCATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp AAGGGTGCTGTGTTCAAAGTTCTCAGTGGCGTTTCATaGGTTTGCCTTTCTGAACCCTGGAAACAAGACATT +
Preference number: 3 (lower is better)
Translates to: KGAVFKVLSGVS*VCLSEPWKQDI
Trigger: AATGTCTTGTTTCCAGGGTTCAGAAAGGCAAACTCATGAAACGCCACTGAGAACTTTGAACACAGCACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR TCA 72 bp GTACAATCGCTTAGTCCAGGACAACAACAGCTCTGTTaGAACATACTGGAAGTCAGTTTTCCCATAGGAAAG +
Preference number: 3 (lower is better)
Translates to: VQSLSPGQQQLC*NILEVSFPIGK
Trigger: CTTTCCTATGGGAAAACTGACTTCCAGTATGTTTCAACAGAGCTGTTGTTGTCCTGGACTAAGCGATTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR GCA 72 bp AATAAAGCAAACACACACTTTCCTGTACGTGAAGGGTaGTGTGTTCAAAGTTCTCAGTGGCGTTTCATGAGT +
Preference number: 3 (lower is better)
Translates to: NKANTHFPVREG*CVQSSQWRFMS
Trigger: ACTCATGAAACGCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTGCTTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR CCA 72 bp AACATACTGGAAGTCAGTTTTCCCATAGGAAAGAACTaGGGTACTCCTCCCAAATTTACCACCTTGCAAACT +
Preference number: 3 (lower is better)
Translates to: NILEVSFPIGKN*GTPPKFTTLQT
Trigger: AGTTTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACTGACTTCCAGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR CCA 72 bp GTTTCCATAGAAGACATAGATTCTTCTTCAGAGGACTaGGGCTCTTCTGTGAGGCTTTCACTCTTAACTTTC +
Preference number: 3 (lower is better)
Translates to: VSIEDIDSSSED*GSSVRLSLLTF
Trigger: GAAAGTTAAGAGTGAAAGCCTCACAGAAGAGCCCCAGTCCTCTGAAGAAGAATCTATGTCTTCTATGGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CCA 72 bp TTTCTGTACATCAAAAGCATTGGACTGAGACAAGGTTaGAAGATGAAGATTAAGGCCTGGAGTGAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: FLYIKSIGLRQG*KMKIKAWSEQH
Trigger: ATGCTGCTCACTCCAGGCCTTAATCTTCATCTTCCAACCTTGTCTCAGTCCAATGCTTTTGATGTACAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR TCA 72 bp GGATTACTACCCACTGCTCCTGGATGGGCATTACAGTaGCTATTGCTAAGACATTGCATAAAGAACTATCAA +
Preference number: 3 (lower is better)
Translates to: GLLPTAPGWALQ*LLLRHCIKNYQ
Trigger: TTGATAGTTCTTTATGCAATGTCTTAGCAATAGTCACTGTAATGCCCATCCAGGAGCAGTGGGTAGTAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR CAA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTGTCAGTAAGTTATaGATGCACTCAACACTGGGA +
Preference number: 3 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTSVSKL*MHSTLG
Trigger: TCCCAGTGTTGAGTGCATCAATAACTTACTGACAGA...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR TCA 72 bp ACTCCTCCCAAATTTACCACCTTGCAAACTTTAGCATaGTTGAGACACGAGGAAAATGCTAAGATTTACCTC +
Preference number: 3 (lower is better)
Translates to: TPPKFTTLQTLA*LRHEENAKIYL
Trigger: GAGGTAAATCTTAGCATTTTCCTCGTGTCTCAATCATGCTAAAGTTTGCAAGGTGGTAAATTTGGGAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR GCA 72 bp AAAACATACTTGTACCTGAATTGGAGACGTGAGCAGTaGATCGTGACACTAGAGCGTTGTCATGTAATTAAA +
Preference number: 3 (lower is better)
Translates to: KTYLYLNWRREQ*IVTLERCHVIK
Trigger: TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR-3UTR CAA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTTCTGTCAGTAAGTTATaGATGCACTCAACACTGGGA +
Preference number: 3 (lower is better)
Translates to: QRIVRNRTEALDFIGIICSVSKL*MHSTLG
Trigger: TCCCAGTGTTGAGTGCATCAATAACTTACTGACAGA...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
3UTR-3UTR CAA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAATCTGTCAGTAAGTTATaGATGCACTCAACACTGGGA +
Preference number: 3 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKSVSKL*MHSTLG
Trigger: TCCCAGTGTTGAGTGCATCAATAACTTACTGACAGA...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR CCA 72 bp ACTAACTCAGCTGAGGTAACAGGTAGCCAGATAAATTaGCTGATTGGGAAACTTACTTCTTCTTTAAAACAT +
Preference number: 3 (lower is better)
Translates to: TNSAEVTGSQIN*LIGKLTSSLKH
Trigger: ATGTTTTAAAGAAGAAGTAAGTTTCCCAATCAGCCAATTTATCTGGCTACCTGTTACCTCAGCTGAGTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR CAA 72 bp TCCACGCCTGGAAGCAATCCATTGGCCAGCAAAGGGTaGCCTGGCACACTGCCAGCAGGAACCGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: STPGSNPLASKG*PGTLPAGTAAA
Trigger: AGCAGCAGCGGTTCCTGCTGGCAGTGTGCCAGGCAACCCTTTGCTGGCCAATGGATTGCTTCCAGGCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp CCGCCCCAGACTCTGCAGTCTTTGACAGGAGTCCTCCCATGCCTAGCAGATTTGAACAGCTGCAGAGGCTaGTCTCCAGGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PPQTLQSLTGVLPCLADLNSCRG*SPGGGA
Trigger: GGCTCCTCCGCCTGGAGAGCAGCCTCTGCAGCTGTT...CAAATCTGCTAGGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTGGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCTGCAGCTCTCGAGTCTaGCCGTCTTCAGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: AICPGPFSSAHHLLRALSCSSRV*PSSVGV
Trigger: CACCCCCACTGAAGACGGCCAGACTCGAGAGCTGCA...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CAA 72 bp GCTGGCTGTCGAGTATCGCTCCGTTGGCACCGAGGGTaGGCTGAATGGAAGTACCTGACGCTGGCACAGCTT +
Preference number: 4 (lower is better)
Translates to: AGCRVSLRWHRG*AEWKYLTLAQL
Trigger: AAGCTGTGCCAGCGTCAGGTACTTCCATTCAGCCAACCCTCGGTGCCAACGGAGCGATACTCGACAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CAA 72 bp ACACTGCCAGCAGGAACCGCTGCTGCTGTGGTAGCCTaGGCAATTCCACTTTTAGGCCTTCTCCCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: TLPAGTAAAVVA*AIPLLGLLPRL
Trigger: CAGGCGGGGGAGAAGGCCTAAAAGTGGAATTGCCAAGGCTACCACAGCAGCAGCGGTTCCTGCTGGCAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCGCGTGGTCATTGAAATaGCCCACTGGAGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: AICPGPFSSAHHLLRALSAWSLK*PTGGPA
Trigger: CGCAGGACCTCCAGTGGGTCATTTCAATGACCACGC...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp CTCCTCCTTCCCCGCCTTTTCTTCACTATAGGCTGGCTGTCGAGTATCGCTCCGCCTCTCCATCAGCTATaGCCAGGTCGCCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LLLPRLFFTIGWLSSIAPPLHQL*PGRQVR
Trigger: CCTCACCTGGCGACCTGGTCATAGCTGATGGAGAGG...CGGAGCGATACTCGACAGCCAGCCTATAGTGAAGAAAAGGCGGGGAAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp GGGTGTGGGGACGCTGGGCTCGCCGCGTTCTGTAGCTGCTCCGGGGCTATCCAGAAGAGAGTTTTGCCCTaGGTTAAGGTTACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GCGDAGLAAFCSCSGAIQKRVLP*VKVTSA
Trigger: AGCAGAAGTAACCTTAACCCAGGGCAAAACTCTCTT...CTGGATAGCCCCGGAGCAGCTACAGAACGCGGCGAGCCCAGCGTCCCCACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp CTCCTCCTTCCCCGCCTTTTCTTCACTATAGGCTGGCTGTCGAGTATCGCTCCGAGCGAGACCTGCAGATaGCTGCAGGAGACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LLLPRLFFTIGWLSSIAPSETCR*LQETAW
Trigger: CCAAGCAGTCTCCTGCAGTCATCTGCAGGTCTCGCT...CGGAGCGATACTCGACAGCCAGCCTATAGTGAAGAAAAGGCGGGGAAGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCAACCTCGGAATGGTCTaGCTCTGGCACCCACACATC +
Preference number: 4 (lower is better)
Translates to: AICPGPFSSAHHLLRALSNLGMV*LWHPHI
Trigger: GATGTGTGGGTGCCAGAGCCAGACCATTCCGAGGTT...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp AGGTTGCAGAGCCCCAGTCAGTCTTCATTGCTCGAGTCTGAGTCCTCGGAGGATCGGATGATGCGCCCCTaGGAGTCCCTGAAGTACATC +
Preference number: 4 (lower is better)
Translates to: RLQSPSQSSLLESESSEDRMMRP*ESLKYI
Trigger: GATGTACTTCAGGGACTCTCAGGGGCGCATCATCCG...ATCCTCCGAGGACTCAGACTCGAGCAATGAAGACTGACTGGGGCTCTGCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAAACAGCTGCAGAGGCTaGTCTCCAGGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGNSCRG*SPGGGA
Trigger: GGCTCCTCCGCCTGGAGAGCAGCCTCTGCAGCTGTT...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp GGGTGTGGGGACGCTGGGCTCGCCGCGTTCTGTAGCTGCTCCGGGGCTATCCAGAATCGCTTGATTTTCTaGTGGATCCTTTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: GCGDAGLAAFCSCSGAIQNRLIF*WILLSF
Trigger: GAAAGATAAAAGGATCCAGCAGAAAATCAAGCGATT...CTGGATAGCCCCGGAGCAGCTACAGAACGCGGCGAGCCCAGCGTCCCCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTGGAAGAGTCTGCTGTaGGGAGGGGGCAGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCWKSLL*GGGSGE
Trigger: CTCGCCACTGCCCCCTCCTCACAGCAGACTCTTCCA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AGGTTGCAGAGCCCCAGTCAGTCTTCATTGCTCGAGTCTGAGTCCTCGGAGGATGGCATTGGCAGGCAATaGGAAGGTGGGTTGCATTTG +
Preference number: 4 (lower is better)
Translates to: RLQSPSQSSLLESESSEDGIGRQ*EGGLHL
Trigger: CAAATGCAACCCACCTTCTCATTGCCTGCCAATGCC...ATCCTCCGAGGACTCAGACTCGAGCAATGAAGACTGACTGGGGCTCTGCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGGTAGTCGGTCCGGCTaGCCCCATGTTTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCGSRSG*PHVWQH
Trigger: GTGCTGCCAAACATGGGGTCAGCCGGACCGACTACC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTGTGAGGTACTGCTGCTaGCCCAGGGCGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAVRYCC*PRAPSS
Trigger: TGAAGATGGCGCCCTGGGTCAGCAGCAGTACCTCAC...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTAACAGCTGCAGAGGCTaGTCTCCAGGCGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCNSCRG*SPGGGA
Trigger: GGCTCCTCCGCCTGGAGAGCAGCCTCTGCAGCTGTT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGATGGCCAGCAAAGGGTTaGCTGGCACACTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGWPAKG*LAHCQQ
Trigger: CTGCTGGCAGTGTGCCAGGCAACCCTTTGCTGGCCA...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCAGGGTCTCCGGAGTTTaGGTTTTTCTTCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: AICPGPFSSAHHLLRALSRVSGV*VFLLLH
Trigger: GTGAAGGAGAAGAAAAACCCAAACTCCGGAGACCCT...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGATGCAGCTCTCGAGTCTaGCCGTCTTCAGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGCSSRV*PSSVGV
Trigger: CACCCCCACTGAAGACGGCCAGACTCGAGAGCTGCA...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTGCAGGAACCTCGGAATaGTCTGGCTCTGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAAGTSE*SGSGTH
Trigger: GTGGGTGCCAGAGCCAGACCATTCCGAGGTTCCTGC...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR CAA 72 bp CAGTCTTTGACAGGAGTCCTCCCATGCCTAGCAGATTaGGTAACCCGGCCATTCCTGAGAACAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: QSLTGVLPCLAD*VTRPFLRTAWG
Trigger: TCCCCATGCTGTTCTCAGGAATGGCCGGGTTACCAAATCTGCTAGGCATGGGAGGACTCCTGTCAAAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CAA 72 bp TTCAGGAGGAGGTTGCAGAGCCCCAGTCAGTCTTCATaGCTCGAGTCTGAGTCCTCGGAGGATGAAGATGAG +
Preference number: 4 (lower is better)
Translates to: FRRRLQSPSQSS*LESESSEDEDE
Trigger: CTCATCTTCATCCTCCGAGGACTCAGACTCGAGCAATGAAGACTGACTGGGGCTCTGCAACCTCCTCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp CATCTTGGGTCGTGCTCAGTGATGCGACACTTTCCTCATCATAGGCTTTCCTGTGGTGACTGCTGCACTTaGGGAAGTGTGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: HLGSCSVMRHFPHHRLSCGDCCT*GSVQEG
Trigger: ACCCTCCTGCACACTTCCTCAAGTGCAGCAGTCACC...ACAGGAAAGCCTATGATGAGGAAAGTGTCGCATCACTGAGCACGACCCAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTAGCGAGACCTGCAGATaGCTGCAGGAGACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEASETCR*LQETAW
Trigger: CCAAGCAGTCTCCTGCAGTCATCTGCAGGTCTCGCT...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ATGGCAAAGCTTCAAGCGTTCAAACAACTGTGGGTGACGAAGGGCCTGCTCCCGGGGTTCAGGAGATGCTaGGTGGGTTCTTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: MAKLQAFKQLWVTKGLLPGFRRC*VGSCFI
Trigger: AATGAAGCAAGAACCCACTCAGCATCTCCTGAACCC...CGGGAGCAGGCCCTTCGTCACCCACAGTTGTTTGAACGCTTGAAGCTTTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGACTGCTGCAGTTAGGTTaGTGCCCAGACCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGLLQLG*CPDHQL
Trigger: GAGCTGGTGGTCTGGGCATCAACCTAACTGCAGCAG...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTCAAACAACTGTGGGTaGCGAAGGGCCTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEASNNCG*RRACSR
Trigger: ACGGGAGCAGGCCCTTCGTCACCCACAGTTGTTTGA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTGGGGCAGAAGTCCTTaGGTGAGCCGCCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAWGRSP*VSRLTL
Trigger: CAGAGTAAGGCGGCTCACTCAAGGACTTCTGCCCCA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAGCACCGAGGGTTGGCTaGATGGAAGTACCTGACGCT +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGAPRVG*MEVPDA
Trigger: AGCGTCAGGTACTTCCATTCAGCCAACCCTCGGTGC...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGACTTGGCAGCTGCAGCTaGACTCAATGCAGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGLGSCS*TQCSRG
Trigger: TCCACGGCTGCATTGAGTTCAGCTGCAGCTGCCAAG...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTCTTGGCAGCTGCAGCTaGACTCAATGCAGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEALGSCS*TQCSRG
Trigger: TCCACGGCTGCATTGAGTTCAGCTGCAGCTGCCAAG...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCCAAAGGCTCAAACTCTaGACCCAAGTTCAGTTCATC +
Preference number: 4 (lower is better)
Translates to: AICPGPFSSAHHLLRALSQRLKL*TQVQFI
Trigger: GATGAACTGAACTTGGGTGCAGAGTTTGAGCCTTTG...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp AGGTTGCAGAGCCCCAGTCAGTCTTCATTGCTCGAGTCTGAGTCCTCGGAGGATGCAGTCGGAGAAAACTaGACTGGAAGAGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RLQSPSQSSLLESESSEDAVGEN*TGRVCC
Trigger: ACAGCAGACTCTTCCAGTGCAGTTTTCTCCGACTGC...ATCCTCCGAGGACTCAGACTCGAGCAATGAAGACTGACTGGGGCTCTGCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp CCGCCCCAGACTCTGCAGTCTTTGACAGGAGTCCTCCCATGCCTAGCAGATTTGCTCACCTGGGTATTCTaGAGCTTAGTGTATGTCCCA +
Preference number: 4 (lower is better)
Translates to: PPQTLQSLTGVLPCLADLLTWVF*SLVYVP
Trigger: TGGGACATACACTAAGCTGCAGAATACCCAGGTGAG...CAAATCTGCTAGGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTGGGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCCGATTGGCCTTTTCTTaGTTGCTTTCTGATTCCACC +
Preference number: 4 (lower is better)
Translates to: AICPGPFSSAHHLLRALSRLAFS*LLSDST
Trigger: GGTGGAATCAGAAAGCAAGCAAGAAAAGGCCAATCG...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp GAAGATGAGGAGGAGGAGGAGGAAGATGAGGAGGAGGAGGAAGATGCCGAAGAATTTTCCACAAACAGCTaGAGAGGCTGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: EDEEEEEEDEEEEEDAEEFSTNS*RGCSPG
Trigger: GCCTGGAGAGCAGCCTCTGCAGCTGTTTGTGGAAAA...TTCTTCGGCATCTTCCTCCTCCTCCTCATCTTCCTCCTCCTCCTCCTCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCTGGCCAGCAAAGGGTTaGCTGGCACACTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGWPAKG*LAHCQQ
Trigger: CTGCTGGCAGTGTGCCAGGCAACCCTTTGCTGGCCA...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp GAAGATGAGGAGGAGGAGGAGGAAGATGAGGAGGAGGAGGAAGATGCCGAAGAAGCCATTGGGCTGGTTTaGGGGATGAATTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: EDEEEEEEDEEEEEDAEEAIGLV*GMNWRA
Trigger: TGCTCTCCAATTCATCCCCCAAACCAGCCCAATGGC...TTCTTCGGCATCTTCCTCCTCCTCCTCATCTTCCTCCTCCTCCTCCTCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp GCCGAAGAACAAGATGAGGATGACGAAGAGCTAGAGCCTGACCGAGAGTGTGAGTGCGTCAACAGGATCTaGGAAGTTCATGTGCACGGG +
Preference number: 4 (lower is better)
Translates to: AEEQDEDDEELEPDRECECVNRI*EVHVHG
Trigger: CCCGTGCACATGAACTTCCCAGATCCTGTTGACGCA...CTCACACTCTCGGTCAGGCTCTAGCTCTTCGTCATCCTCATCTTGTTCTTCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTATGGTTGGTAGACAGTaGGGAAGGCCAGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERMVGRQ*GRPAPS
Trigger: GCTCGGGGCTGGCCTTCCCCACTGTCTACCAACCAT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTATGGTTGGTAGACAGTaGGGAAGGCCAGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCMVGRQ*GRPAPS
Trigger: GCTCGGGGCTGGCCTTCCCCACTGTCTACCAACCAT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGCAGCTCTCGAGTCTaGCCGTCTTCAGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERCSSRV*PSSVGV
Trigger: CACCCCCACTGAAGACGGCCAGACTCGAGAGCTGCA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGCAGGAACCTCGGAATaGTCTGGCTCTGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERAGTSE*SGSGTH
Trigger: GTGGGTGCCAGAGCCAGACCATTCCGAGGTTCCTGC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCATCTTTAAAGATGGCTaGGGCAGGCTTGTATTCTGG +
Preference number: 4 (lower is better)
Translates to: AICPGPFSSAHHLLRALSIFKDG*GRLVFW
Trigger: CCAGAATACAAGCCTGCCCCAGCCATCTTTAAAGAT...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
3UTR CAA 72 bp TTCCTCGCTTTTCTTCCGCCCCAGACTCTGCAGTCTTaGACAGGAGTCCTCCCATGCCTAGCAGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: FLAFLPPQTLQS*TGVLPCLADLV
Trigger: TACCAAATCTGCTAGGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTGGGGCGGAAGAAAAGCGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCTGTGTTGGAGTACCTTaGACATGGTTTAGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: AICPGPFSSAHHLLRALSCVGVP*TWFSES
Trigger: AGACTCACTAAACCATGTTCAAGGTACTCCAACACA...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGGTGACTGCTGCACTTaGGGAAGTGTGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERGDCCT*GSVQEG
Trigger: ACCCTCCTGCACACTTCCTCAAGTGCAGCAGTCACC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTAGCGAGACCTGCAGATaGCTGCAGGAGACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCSETCR*LQETAW
Trigger: CCAAGCAGTCTCCTGCAGTCATCTGCAGGTCTCGCT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCGGATGATGCGCCCCTaGGAGTCCCTGAAGTACATC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCRMMRP*ESLKYI
Trigger: GATGTACTTCAGGGACTCTCAGGGGCGCATCATCCG...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCCGGATGATGCGCCCCTaGGAGTCCCTGAAGTACATC +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGRMMRP*ESLKYI
Trigger: GATGTACTTCAGGGACTCTCAGGGGCGCATCATCCG...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCCTGCTGCAGTTAGGTTaGTGCCCAGACCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTLLQLG*CPDHQL
Trigger: GAGCTGGTGGTCTGGGCATCAACCTAACTGCAGCAG...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCTGCTGCAGTTAGGTTaGTGCCCAGACCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCLLQLG*CPDHQL
Trigger: GAGCTGGTGGTCTGGGCATCAACCTAACTGCAGCAG...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCGCACCGAGGGTTGGCTaGATGGAAGTACCTGACGCT +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGAPRVG*MEVPDA
Trigger: AGCGTCAGGTACTTCCATTCAGCCAACCCTCGGTGC...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTAGACTCTGCAGTCTTTaGCAGGAGTCCTCCCATGCC +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEARLCSL*QESSHA
Trigger: GGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCT...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CCGCCCCAGACTCTGCAGTCTTTGACAGGAGTCCTCCCATGCCTAGCAGATTTGTCTGGGAAGTTCATGTaGACGGGCGATAATTTTGAG +
Preference number: 4 (lower is better)
Translates to: PPQTLQSLTGVLPCLADLSGKFM*TGDNFE
Trigger: CTCAAAATTATCGCCCGTGCACATGAACTTCCCAGA...CAAATCTGCTAGGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTGGGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTACCCACTGGAGGTCCTaGGTCAACAGGATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEATHWRS*VNRIWE
Trigger: TTCCCAGATCCTGTTGACGCAGGACCTCCAGTGGGT...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CTCCTCCTTCCCCGCCTTTTCTTCACTATAGGCTGGCTGTCGAGTATCGCTCCGTTATCTTTCAAAAGCTaGTGTTCCGTGGCCCACTCA +
Preference number: 4 (lower is better)
Translates to: LLLPRLFFTIGWLSSIAPLSFKS*CSVAHS
Trigger: TGAGTGGGCCACGGAACAGCAGCTTTTGAAAGATAA...CGGAGCGATACTCGACAGCCAGCCTATAGTGAAGAAAAGGCGGGGAAGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCAATGGTAGAAAGCGGTaGAATAATCAGGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: AICPGPFSSAHHLLRALSNGRKR*NNQERS
Trigger: GGACCTTTCCTGATTATTGCACCGCTTTCTACCATT...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp TCCTTCGAGTCATTTCCTCGCTTTTCTTCCGCCCCAGACTCTGCAGTCTTTGACCCTTGTCGTCAGGCTTaGCCACTCTTTCCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SFESFPRFSSAPDSAVFDPCRQA*PLFPRS
Trigger: GCTTCTTGGAAAGAGTGGGCAAGCCTGACGACAAGG...GTCAAAGACTGCAGAGTCTGGGGCGGAAGAAAAGCGAGGAAATGACTCGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCCATCTTCTGGTGTGTTaGAGTACCTTGAACATGGTT +
Preference number: 4 (lower is better)
Translates to: AICPGPFSSAHHLLRALSHLLVC*STLNMV
Trigger: AACCATGTTCAAGGTACTCCAACACACCAGAAGATG...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp CATCTTGGGTCGTGCTCAGTGATGCGACACTTTCCTCATCATAGGCTTTCCTGTGTAGTGATGATGGCTTaGAACCGGTACGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: HLGSCSVMRHFPHHRLSCVVMMA*NRYAPR
Trigger: CCGAGGAGCGTACCGGTTCCAAGCCATCATCACTAC...ACAGGAAAGCCTATGATGAGGAAAGTGTCGCATCACTGAGCACGACCCAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAGAGGCTGCATGGCATTaGCAGGCAATGAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGEAAWH*QAMRRW
Trigger: CCACCTTCTCATTGCCTGCCAATGCCATGCAGCCTC...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTGAGGCTGCATGGCATTaGCAGGCAATGAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAEAAWH*QAMRRW
Trigger: CCACCTTCTCATTGCCTGCCAATGCCATGCAGCCTC...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAGCGTTCAAACAACTGTaGGTGACGAAGGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGAFKQL*VTKGLL
Trigger: GAGCAGGCCCTTCGTCACCCACAGTTGTTTGAACGC...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTCGAGGGTTGGCTGAATaGAAGTACCTGACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEARGLAE*KYLTLA
Trigger: TGCCAGCGTCAGGTACTTCCATTCAGCCAACCCTCG...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AGGTTGCAGAGCCCCAGTCAGTCTTCATTGCTCGAGTCTGAGTCCTCGGAGGATTTCTTTCCCTTCGACTaGAGCACTAGGAAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: RLQSPSQSSLLESESSEDFFPFD*STRKVL
Trigger: GAGAACTTTCCTAGTGCTTCAGTCGAAGGGAAAGAA...ATCCTCCGAGGACTCAGACTCGAGCAATGAAGACTGACTGGGGCTCTGCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp GAAGATGAGGAGGAGGAGGAGGAAGATGAGGAGGAGGAGGAAGATGCCGAAGAATCTTGTGTCAGGCCGTaGAGCTTGCAGTTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: EDEEEEEEDEEEEEDAEESCVRP*SLQLFK
Trigger: TTTGAACAACTGCAAGCTTCACGGCCTGACACAAGA...TTCTTCGGCATCTTCCTCCTCCTCCTCATCTTCCTCCTCCTCCTCCTCATCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp CCGCCCCAGACTCTGCAGTCTTTGACAGGAGTCCTCCCATGCCTAGCAGATTTGTTGATAAGATACGGATaGTTGCAGCATTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: PPQTLQSLTGVLPCLADLLIRYG*LQHFLS
Trigger: GCTCAGGAAATGCTGCAATCATCCGTATCTTATCAA...CAAATCTGCTAGGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTGGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp ATGGCAAAGCTTCAAGCGTTCAAACAACTGTGGGTGACGAAGGGCCTGCTCCCGAAGCTGGGTCTGCTCTaGTCGTGTTGTACTTTTCAT +
Preference number: 4 (lower is better)
Translates to: MAKLQAFKQLWVTKGLLPKLGLL*SCCTFH
Trigger: ATGAAAAGTACAACACGATCAGAGCAGACCCAGCTT...CGGGAGCAGGCCCTTCGTCACCCACAGTTGTTTGAACGCTTGAAGCTTTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTTGGGTCGTGCTCAGTaGTGCGACACTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEALGRAQ*CDTFLI
Trigger: GATGAGGAAAGTGTCGCATCACTGAGCACGACCCAA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTGCCTGGAAACTGTCCTaGGTTTCATCTTGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAAWKLS*VSSWVV
Trigger: CACGACCCAAGATGAAACTCAGGACAGTTTCCAGGC...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAGGAGGACGCCCTCTCTaGACCCTCGTCTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQGGRPL*TLVCAV
Trigger: AACAGCACAGACGAGGGTTCAGAGAGGGCGTCCTCC...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp TTCTGGAAGAAACCCAGACTGTTTAACAACATCTCCCCATTCAGGAGCCACTCCGCACTTGAGGAAGTGTaGAGGAGGGTTTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: FWKKPRLFNNISPFRSHSALEEV*RRVCSR
Trigger: CCGACTGCAAACCCTCCTGCACACTTCCTCAAGTGC...GGAGTGGCTCCTGAATGGGGAGATGTTGTTAAACAGTCTGGGTTTCTTCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTACCCACTGGAGGTCCTaGGTCAACAGGATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERTHWRS*VNRIWE
Trigger: TTCCCAGATCCTGTTGACGCAGGACCTCCAGTGGGT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGGGCTCTGTTCTGGCTaGAACCATGCGTCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERGLCSG*NHASVC
Trigger: ACAGACAGACGCATGGTTGCAGCCAGAACAGAGCCC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGCCTTCTCCCCCGCCTaGTTACTTCCTCTCTCACAA +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCAFSPA*LLPLSQ
Trigger: TTGTGAGAGAGGAAGTAAGCAGGCGGGGGAGAAGGC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTGCGTCAACAGGATCTaGGAAGTTCATGTGCACGGG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEACVNRI*EVHVHG
Trigger: CCCGTGCACATGAACTTCCCAGATCCTGTTGACGCA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CGGTTGATCATTACCCGGTCCTTTGGCCAATATGAGGCTGCCAGCATATATCCAAAAGCTGCTGTTCCGTaGCCCACTCACAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: RLIITRSFGQYEAASIYPKAAVP*PTHSGD
Trigger: ATCTCCACTGTGAGTGGGCCACGGAACAGCAGCTTT...TGGATATATGCTGGCAGCCTCATATTGGCCAAAGGACCGGGTAATGATCAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAATGCAGCTCTCGAGTCTaGCCGTCTTCAGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQCSSRV*PSSVGV
Trigger: CACCCCCACTGAAGACGGCCAGACTCGAGAGCTGCA...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTAACCTCGGAATGGTCTaGCTCTGGCACCCACACATC +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERNLGMV*LWHPHI
Trigger: GATGTGTGGGTGCCAGAGCCAGACCATTCCGAGGTT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGAGGCTGCATGGCATTaGCAGGCAATGAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCEAAWH*QAMRRW
Trigger: CCACCTTCTCATTGCCTGCCAATGCCATGCAGCCTC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGCGTTCAAACAACTGTaGGTGACGAAGGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERAFKQL*VTKGLL
Trigger: GAGCAGGCCCTTCGTCACCCACAGTTGTTTGAACGC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTAGGAGGAAGAGGATCTaGAAGAACACGATGAGCGCG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEARRKRI*KNTMSA
Trigger: CGCGCTCATCGTGTTCTTCCAGATCCTCTTCCTCCT...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAACCAGTAGCTGTCTGGTaGCCCCACATTGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQPVAVW*PHIGLP
Trigger: TGGCAGTCCAATGTGGGGTCACCAGACAGCTACTGG...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp GCCGAAGAACAAGATGAGGATGACGAAGAGCTAGAGCCTGACCGAGAGTGTGAGACTTCTGCTTTGTTGTaGGTGAAGGGAAGAACACTG +
Preference number: 4 (lower is better)
Translates to: AEEQDEDDEELEPDRECETSALL*VKGRTL
Trigger: CAGTGTTCTTCCCTTCACTCACAACAAAGCAGAAGT...CTCACACTCTCGGTCAGGCTCTAGCTCTTCGTCATCCTCATCTTGTTCTTCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAGCGTGGTCATTGAAATaGCCCACTGGAGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQAWSLK*PTGGPA
Trigger: CGCAGGACCTCCAGTGGGTCATTTCAATGACCACGC...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp GAAGATGAGGAGGAGGAGGAGGAAGATGAGGAGGAGGAGGAAGATGCCGAAGAAATCTTGTCCAAATGGTaGTTCGTCAAATTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: EDEEEEEEDEEEEEDAEEILSKW*FVKLGE
Trigger: CTCCCCCAATTTGACGAATCACCATTTGGACAAGAT...TTCTTCGGCATCTTCCTCCTCCTCCTCATCTTCCTCCTCCTCCTCCTCATCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp AGAGAAGGCAAAACCAGTTCAGGAGGAGGTTGCAGAGCCCCAGTCAGTCTTCATATACAAGATGCGAAGTaGACTGGCGATCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: REGKTSSGGGCRAPVSLHIQDAK*TGDPGH
Trigger: ATGACCTGGATCGCCAGTTCACTTCGCATCTTGTAT...ATGAAGACTGACTGGGGCTCTGCAACCTCCTCCTGAACTGGTTTTGCCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp CTCCTCCTTCCCCGCCTTTTCTTCACTATAGGCTGGCTGTCGAGTATCGCTCCGCTCCAAACTCTTGCATaGATGTTGATTCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: LLLPRLFFTIGWLSSIAPLQTLA*MLIQME
Trigger: TTCCATCTGAATCAACATTCATGCAAGAGTTTGGAG...CGGAGCGATACTCGACAGCCAGCCTATAGTGAAGAAAAGGCGGGGAAGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAATGGGGCAGAAGTCCTTaGGTGAGCCGCCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQWGRSP*VSRLTL
Trigger: CAGAGTAAGGCGGCTCACTCAAGGACTTCTGCCCCA...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGCCTGGAAACTGTCCTaGGTTTCATCTTGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERAWKLS*VSSWVV
Trigger: CACGACCCAAGATGAAACTCAGGACAGTTTCCAGGC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAGTGAGGTACTGCTGCTaGCCCAGGGCGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKVRYCC*PRAPSS
Trigger: TGAAGATGGCGCCCTGGGTCAGCAGCAGTACCTCAC...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GCCGAAGAACAAGATGAGGATGACGAAGAGCTAGAGCCTGACCGAGAGTGTGAGAAGGCAAAGTCAGGGTaGGCCACAAAGCTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: AEEQDEDDEELEPDRECEKAKSG*ATKLLF
Trigger: AAACAAAAGCTTTGTGGCGCACCCTGACTTTGCCTT...CTCACACTCTCGGTCAGGCTCTAGCTCTTCGTCATCCTCATCTTGTTCTTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTTTTCCACAAACAGCTaGAGAGGCTGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCFSTNS*RGCSPG
Trigger: GCCTGGAGAGCAGCCTCTGCAGCTGTTTGTGGAAAA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTCGTCTTGCAGGAGCTaGTCTGGGTTATATTTCCGC +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEASSCRS*SGLYFR
Trigger: GCGGAAATATAACCCAGAGCAGCTCCTGCAAGACGA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CTCCTCCTTCCCCGCCTTTTCTTCACTATAGGCTGGCTGTCGAGTATCGCTCCGCACATCAATGTCACTTaGATCAACTCCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LLLPRLFFTIGWLSSIAPHINVT*INSIKD
Trigger: GTCTTTGATGGAGTTGATGCAAGTGACATTGATGTG...CGGAGCGATACTCGACAGCCAGCCTATAGTGAAGAAAAGGCGGGGAAGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTCCTTGTCGTCAGGCTTaGCCACTCTTTCCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERPCRQA*PLFPRS
Trigger: GCTTCTTGGAAAGAGTGGGCAAGCCTGACGACAAGG...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTGTGCTGACTGCTCGTaGTCTTCTCTGACAGCAACG +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCCADCS*SSLTAT
Trigger: CGTTGCTGTCAGAGAAGAGCACGAGCAGTCAGCACA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGCTGACTGCTCGTaGTCTTCTCTGACAGCAACG +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERCADCS*SSLTAT
Trigger: CGTTGCTGTCAGAGAAGAGCACGAGCAGTCAGCACA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGCCATTGGGCTGGTTTaGGGGATGAATTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCAIGLV*GMNWRA
Trigger: TGCTCTCCAATTCATCCCCCAAACCAGCCCAATGGC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGCGTCAACAGGATCTaGGAAGTTCATGTGCACGGG +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERCVNRI*EVHVHG
Trigger: CCCGTGCACATGAACTTCCCAGATCCTGTTGACGCA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTAATGGTTGGTAGACAGTaGGGAAGGCCAGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLMVGRQ*GRPAPS
Trigger: GCTCGGGGCTGGCCTTCCCCACTGTCTACCAACCAT...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAATGGTTGGTAGACAGTaGGGAAGGCCAGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKMVGRQ*GRPAPS
Trigger: GCTCGGGGCTGGCCTTCCCCACTGTCTACCAACCAT...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTAACCATCACTCTTCTTaGAAGATGGAGGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEANHHSS*KMEAAA
Trigger: AGCGGCAGCCTCCATCTTCCAAGAAGAGTGATGGTT...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTAAAGCTGCTGTTCCGTaGCCCACTCACAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERKAAVP*PTHSGD
Trigger: ATCTCCACTGTGAGTGGGCCACGGAACAGCAGCTTT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GCCGAAGAACAAGATGAGGATGACGAAGAGCTAGAGCCTGACCGAGAGTGTGAGAGCCACTCTGCTTTCTaGATATCAAAGGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: AEEQDEDDEELEPDRECESHSAF*ISKELV
Trigger: GACAAGCTCCTTTGATATCCAGAAAGCAGAGTGGCT...CTCACACTCTCGGTCAGGCTCTAGCTCTTCGTCATCCTCATCTTGTTCTTCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAGCAGGAACCTCGGAATaGTCTGGCTCTGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKAGTSE*SGSGTH
Trigger: GTGGGTGCCAGAGCCAGACCATTCCGAGGTTCCTGC...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGATTCCCACCAGACTTCTaGTCTCCAGTAGCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGFPPDF*SPVACD
Trigger: ATCACAGGCTACTGGAGACCAGAAGTCTGGTGGGAA...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTATCCAGCAGTTTGGTaGTATAGAAGGACGCCACCG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAYPAVW*YRRTPP
Trigger: CGGTGGCGTCCTTCTATACCACCAAACTGCTGGATA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCCTGGAAGCAATCCATTaGCCAGCAAAGGGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGLEAIH*PAKGCL
Trigger: CAGGCAACCCTTTGCTGGCCAATGGATTGCTTCCAG...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTGTGAGATCCACGCCTaGAAGCAATCCATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCCEIHA*KQSIGQ
Trigger: CTGGCCAATGGATTGCTTCCAGGCGTGGATCTCACA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGAGATCCACGCCTaGAAGCAATCCATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERCEIHA*KQSIGQ
Trigger: CTGGCCAATGGATTGCTTCCAGGCGTGGATCTCACA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTATGAAGATTAAGGCCTaGAGTGAGCAGCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAMKIKA*SEQHPW
Trigger: CCAGGGATGCTGCTCACTCCAGGCCTTAATCTTCAT...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
3UTR CAA 72 bp CTTGTAGCAGGTAAGCAGACTCTGGCGTTCCATTGTTaGCCTGGAAACTGTCCTGAGTTTCATCTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: LVAGKQTLAFHC*PGNCPEFHLGS
Trigger: CGACCCAAGATGAAACTCAGGACAGTTTCCAGGCAAACAATGGAACGCCAGAGTCTGCTTACCTGCTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTGGAAGAGTCTGCTGTaGGGAGGGGGCAGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTWKSLL*GGGSGE
Trigger: CTCGCCACTGCCCCCTCCTCACAGCAGACTCTTCCA...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGGGTTCAGGAGATGCTaGGTGGGTTCTTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERGFRRC*VGSCFI
Trigger: AATGAAGCAAGAACCCACTCAGCATCTCCTGAACCC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGCTTCTTCTCAGACATaGCCCTCACCTGGGTATTCT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERASSQT*PSPGYS
Trigger: AGAATACCCAGGTGAGGGTCATGTCTGAGAAGAAGC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGTCCTTTGGCCAATATaGGGCTGCCAGCATATATCC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCVLWPI*GCQHIS
Trigger: GGATATATGCTGGCAGCCTCATATTGGCCAAAGGAC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATGTGAGGTACTGCTGCTaGCCCAGGGCGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYVRYCC*PRAPSS
Trigger: TGAAGATGGCGCCCTGGGTCAGCAGCAGTACCTCAC...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp CGGTTGATCATTACCCGGTCCTTTGGCCAATATGAGGCTGCCAGCATATATCCAGACCCCACATTGGACTaGCATCTGCTACATCTTGAA +
Preference number: 4 (lower is better)
Translates to: RLIITRSFGQYEAASIYPDPTLD*HLLHLE
Trigger: TTCAAGATGTAGCAGATGGCAGTCCAATGTGGGGTC...TGGATATATGCTGGCAGCCTCATATTGGCCAAAGGACCGGGTAATGATCAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCGCAGTCGGAGAAAACTaGACTGGAAGAGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTAVGEN*TGRVCC
Trigger: ACAGCAGACTCTTCCAGTGCAGTTTTCTCCGACTGC...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAGCACTTGAGGAAGTGTaGAGGAGGGTTTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQALEEV*RRVCSR
Trigger: CCGACTGCAAACCCTCCTGCACACTTCCTCAAGTGC...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTCTCACCTGGGTATTCTaGAGCTTAGTGTATGTCCCA +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEALTWVF*SLVYVP
Trigger: TGGGACATACACTAAGCTGCAGAATACCCAGGTGAG...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTAAAGTGTGCCCTCTGTaGTTGTCTCAGCTTGAATCG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAKVCPL*LSQLES
Trigger: CGATTCAAGCTGAGACAAGCACAGAGGGCACACTTT...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GCCATCTGTCCAGGTCCTTTCTCTTCGGCGCATCATCTCCTGCGAGCCTTGTCCAAGTACATCTCATATTaGTGTATCATCTGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: AICPGPFSSAHHLLRALSKYISY*CIICLL
Trigger: TAGCAGACAGATGATACAGCAATATGAGATGTACTT...GGACAAGGCTCGCAGGAGATGATGCGCCGAAGAGAAAGGACCTGGACAGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTGTTTTGGAGAGGAGTaGCAGTCAAGAGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEACFGEE*QSRAPC
Trigger: ACAAGGTGCTCTTGACTGGCACTCCTCTCCAAAACA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CATCTTGGGTCGTGCTCAGTGATGCGACACTTTCCTCATCATAGGCTTTCCTGTTGTTTTGGAGAGGAGTaGCAGTCAAGAGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: HLGSCSVMRHFPHHRLSCCFGEE*QSRAPC
Trigger: ACAAGGTGCTCTTGACTGGCACTCCTCTCCAAAACA...ACAGGAAAGCCTATGATGAGGAAAGTGTCGCATCACTGAGCACGACCCAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATAATGGCTCCATATaGCCCTCTTCGAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCHNGSI*PSSKQV
Trigger: GACCTGCTTCGAAGAGGGGCATATGGAGCCATTATG...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTCGTCTTGCAGGAGCTaGTCTGGGTTATATTTCCGC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCSSCRS*SGLYFR
Trigger: GCGGAAATATAACCCAGAGCAGCTCCTGCAAGACGA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTCTCCTTGTCCATCTCTaGTGTCTTTCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEALLVHL*CLSILA
Trigger: AGCCAAGATCGAAAGACAGCAGAGATGGACAAGGAG...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTGTAGTTCCTCTGAGCTaGCATAAACGAGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAVVPLS*HKREFR
Trigger: CCTGAACTCTCGTTTATGGCAGCTCAGAGGAACTAC...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAATTGGGTCTTCCCTCGTaGAGCTGCACCCTTGGGATA +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQLGLPS*SCTLGI
Trigger: TATCCCAAGGGTGCAGCTGCACGAGGGAAGACCCAA...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAACATGCCCATCAGCCCTaGAGTCACTTGCAGCGACTG +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKHAHQP*SHLQRL
Trigger: CAGTCGCTGCAAGTGACTGCAGGGCTGATGGGCATG...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ATGGCAAAGCTTCAAGCGTTCAAACAACTGTGGGTGACGAAGGGCCTGCTCCCGGCAGGAAGTCATACTTaGAGAAGGTCTGTTATAGTT +
Preference number: 4 (lower is better)
Translates to: MAKLQAFKQLWVTKGLLPAGSHT*RRSVIV
Trigger: AACTATAACAGACCTTCTCCAAGTATGACTTCCTGC...CGGGAGCAGGCCCTTCGTCACCCACAGTTGTTTGAACGCTTGAAGCTTTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTAATTCAGTGATGGAGTaGGGTTCAGGAGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEANSVME*GSGDAE
Trigger: CTCAGCATCTCCTGAACCCCACTCCATCACTGAATT...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTAACCATCACTCTTCTTaGAAGATGGAGGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCNHHSS*KMEAAA
Trigger: AGCGGCAGCCTCCATCTTCCAAGAAGAGTGATGGTT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCGACATGACCCTCACCTaGGTATTCTGCAGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTDMTLT*VFCSLV
Trigger: CACTAAGCTGCAGAATACCCAGGTGAGGGTCATGTC...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp TTCTGGAAGAAACCCAGACTGTTTAACAACATCTCCCCATTCAGGAGCCACTCCGACATGACCCTCACCTaGGTATTCTGCAGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: FWKKPRLFNNISPFRSHSDMTLT*VFCSLV
Trigger: CACTAAGCTGCAGAATACCCAGGTGAGGGTCATGTC...GGAGTGGCTCCTGAATGGGGAGATGTTGTTAAACAGTCTGGGTTTCTTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAGTAGTGATGATGGCTTaGAACCGGTACGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQVVMMA*NRYAPR
Trigger: CCGAGGAGCGTACCGGTTCCAAGCCATCATCACTAC...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp TCCTTCGAGTCATTTCCTCGCTTTTCTTCCGCCCCAGACTCTGCAGTCTTTGACAAGATGAGCACTTTATaGCCGCCGGCTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: SFESFPRFSSAPDSAVFDKMSTL*PPAFIL
Trigger: CAAAATGAAAGCCGGCGGCCATAAAGTGCTCATCTT...GTCAAAGACTGCAGAGTCTGGGGCGGAAGAAAAGCGAGGAAATGACTCGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGACAGGCAATGAGAAGGTaGGTTGCATTTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGQAMRR*VAFAGC
Trigger: ACATCCAGCAAATGCAACCCACCTTCTCATTGCCTG...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp CGGTTGATCATTACCCGGTCCTTTGGCCAATATGAGGCTGCCAGCATATATCCACAGGCAATGAGAAGGTaGGTTGCATTTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: RLIITRSFGQYEAASIYPQAMRR*VAFAGC
Trigger: ACATCCAGCAAATGCAACCCACCTTCTCATTGCCTG...TGGATATATGCTGGCAGCCTCATATTGGCCAAAGGACCGGGTAATGATCAACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCTTCCCACCAGACTTCTaGTCTCCAGTAGCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGFPPDF*SPVACD
Trigger: ATCACAGGCTACTGGAGACCAGAAGTCTGGTGGGAA...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAGAATCAGAGCTGGACTaGGATCCTCTTTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGESELD*DPLLWT
Trigger: AGTCCACAAAAGAGGATCCCAGTCCAGCTCTGATTC...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAGTGCCTTCTCGCTTCTaGACATCTTCTTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGVPSRF*TSSSLS
Trigger: TGACAGTGAAGAAGATGTCCAGAAGCGAGAAGGCAC...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp CATCTTGGGTCGTGCTCAGTGATGCGACACTTTCCTCATCATAGGCTTTCCTGTGGCTGGTTTGGGGGATaGATTGGAGAGCAATTAAAT +
Preference number: 4 (lower is better)
Translates to: HLGSCSVMRHFPHHRLSCGWFGG*IGEQLN
Trigger: ATTTAATTGCTCTCCAATTCATCCCCCAAACCAGCC...ACAGGAAAGCCTATGATGAGGAAAGTGTCGCATCACTGAGCACGACCCAAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTACTTCTGCTTTGTTGTaGGTGAAGGGAAGAACACTG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEATSALL*VKGRTL
Trigger: CAGTGTTCTTCCCTTCACTCACAACAAAGCAGAAGT...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTATACAAGATGCGAAGTaGACTGGCGATCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCIQDAK*TGDPGH
Trigger: ATGACCTGGATCGCCAGTTCACTTCGCATCTTGTAT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTATACAAGATGCGAAGTaGACTGGCGATCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERIQDAK*TGDPGH
Trigger: ATGACCTGGATCGCCAGTTCACTTCGCATCTTGTAT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGACTGCTATGTAAATGTTaGTGGTTGGTAGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGLLCKC*WLVDSG
Trigger: CCCACTGTCTACCAACCATCAACATTTACATAGCAG...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTCTGCTATGTAAATGTTaGTGGTTGGTAGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEALLCKC*WLVDSG
Trigger: CCCACTGTCTACCAACCATCAACATTTACATAGCAG...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTTCTTTCCCTTCGACTaGAGCACTAGGAAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAFFPFD*STRKVL
Trigger: GAGAACTTTCCTAGTGCTTCAGTCGAAGGGAAAGAA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCGAAAGTGAAGAAGGCTaGACAGTTCCTCGACTGTGT +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGESEEG*TVPRLC
Trigger: ACACAGTCGAGGAACTGTTCAGCCTTCTTCACTTTC...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGAAAGTGAAGAAGGCTaGACAGTTCCTCGACTGTGT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCESEEG*TVPRLC
Trigger: ACACAGTCGAGGAACTGTTCAGCCTTCTTCACTTTC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGAAAGTGAAGAAGGCTaGACAGTTCCTCGACTGTGT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERESEEG*TVPRLC
Trigger: ACACAGTCGAGGAACTGTTCAGCCTTCTTCACTTTC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CGGTTGATCATTACCCGGTCCTTTGGCCAATATGAGGCTGCCAGCATATATCCAAAGGGTTCAAGAAAGTaGAGAAGGCTGAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: RLIITRSFGQYEAASIYPKGSRK*RRLNSS
Trigger: GGAACTGTTCAGCCTTCTTCACTTTCTTGAACCCTT...TGGATATATGCTGGCAGCCTCATATTGGCCAAAGGACCGGGTAATGATCAACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAAAGCTGGGTCTGCTCTaGTCGTGTTGTACTTTTCAT +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGKLGLL*SCCTFH
Trigger: ATGAAAAGTACAACACGATCAGAGCAGACCCAGCTT...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAGGCATTGGCAGGCAATaGGAAGGTGGGTTGCATTTG +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQGIGRQ*EGGLHL
Trigger: CAAATGCAACCCACCTTCTCATTGCCTGCCAATGCC...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTCCGGCACATGGACATaGATGCACACAAATACTTCT +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEASGTWT*MHTNTS
Trigger: AGAAGTATTTGTGTGCATTCATGTCCATGTGCCGGA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGGTAGTCGGTCCGGCTaGCCCCATGTTTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAGSRSG*PHVWQH
Trigger: GTGCTGCCAAACATGGGGTCAGCCGGACCGACTACC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTATCCCGGTGGGAATATaGTTAGGTGGCTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAIPVGI*LGGLFL
Trigger: CAGAAATAAGCCACCTAATCATATTCCCACCGGGAT...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGATCACAACGGGACCAGTaGGAATACGTTCAAACATAC +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGSQRDQ*EYVQTY
Trigger: GTATGTTTGAACGTATTCTCACTGGTCCCGTTGTGA...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGACAAGGTTGGAAGATaGAGATTAAGGCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERDKVGR*RLRPGV
Trigger: CACTCCAGGCCTTAATCTTCATCTTCCAACCTTGTC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCGACAAGGTTGGAAGATaGAGATTAAGGCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGDKVGR*RLRPGV
Trigger: CACTCCAGGCCTTAATCTTCATCTTCCAACCTTGTC...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGACAAAGGCTCAAACTCTaGACCCAAGTTCAGTTCATC +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGQRLKL*TQVQFI
Trigger: GATGAACTGAACTTGGGTGCAGAGTTTGAGCCTTTG...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGACATTGGACTGCCATCTaGTACATCTTGAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGHWTAI*YILKQA
Trigger: GGCTTGTTTCAAGATGTAGCAGATGGCAGTCCAATG...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGACCCCACATTGGACTaGCATCTGCTACATCTTGAA +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERDPTLD*HLLHLE
Trigger: TTCAAGATGTAGCAGATGGCAGTCCAATGTGGGGTC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAAAGGCAAAGTCAGGGTaGGCCACAAAGCTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGKAKSG*ATKLLF
Trigger: AAACAAAAGCTTTGTGGCGCACCCTGACTTTGCCTT...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTGGCCAAGAGAGTTTTaGCCTGGGTTAAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAWPREF*PGLRLL
Trigger: AAGTAACCTTAACCCAGGGCAAAACTCTCTTGGCCA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAACCCACTGGAGGTCCTaGGTCAACAGGATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKTHWRS*VNRIWE
Trigger: TTCCCAGATCCTGTTGACGCAGGACCTCCAGTGGGT...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGACGATTGGCCTTTTCTTaGTTGCTTTCTGATTCCACC +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGRLAFS*LLSDST
Trigger: GGTGGAATCAGAAAGCAAGCAAGAAAAGGCCAATCG...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp CATCTTGGGTCGTGCTCAGTGATGCGACACTTTCCTCATCATAGGCTTTCCTGTTTCTCTTTCCCAGTTTaGAATGGTAGAAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: HLGSCSVMRHFPHHRLSCFSFPV*NGRKRC
Trigger: GCACCGCTTTCTACCATTGCAAACTGGGAAAGAGAA...ACAGGAAAGCCTATGATGAGGAAAGTGTCGCATCACTGAGCACGACCCAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTGTTTTGGAGAGGAGTaGCAGTCAAGAGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCCFGEE*QSRAPC
Trigger: ACAAGGTGCTCTTGACTGGCACTCCTCTCCAAAACA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CGGTTGATCATTACCCGGTCCTTTGGCCAATATGAGGCTGCCAGCATATATCCAAGTCTCTTCCTTGGGTaGCAATTTCTTCTCCACATC +
Preference number: 4 (lower is better)
Translates to: RLIITRSFGQYEAASIYPSLFLG*QFLLHI
Trigger: GATGTGGAGAAGAAATTGGCACCCAAGGAAGAGACT...TGGATATATGCTGGCAGCCTCATATTGGCCAAAGGACCGGGTAATGATCAACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTCTCCTTGTCCATCTCTaGTGTCTTTCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERLLVHL*CLSILA
Trigger: AGCCAAGATCGAAAGACAGCAGAGATGGACAAGGAG...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGTAGTTCCTCTGAGCTaGCATAAACGAGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERVVPLS*HKREFR
Trigger: CCTGAACTCTCGTTTATGGCAGCTCAGAGGAACTAC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCGTAGTTCCTCTGAGCTaGCATAAACGAGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTVVPLS*HKREFR
Trigger: CCTGAACTCTCGTTTATGGCAGCTCAGAGGAACTAC...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTTCTGGCTGCAACCATaGGTCTGTCTGTTTCACTTT +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAFWLQP*VCLFHF
Trigger: AAAGTGAAACAGACAGACGCATGGTTGCAGCCAGAA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAGGGCTCTGTTCTGGCTaGAACCATGCGTCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKGLCSG*NHASVC
Trigger: ACAGACAGACGCATGGTTGCAGCCAGAACAGAGCCC...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGGCGTTCCATTGTTTaGCTGGAAACTGTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERWRSIV*LETVLS
Trigger: ACTCAGGACAGTTTCCAGGCAAACAATGGAACGCCA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAACAAAGGAGGAGCAAATaGGCCTCCAACCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQQRRSK*ASNLSR
Trigger: GCGAGAAAGGTTGGAGGCGCATTTGCTCCTCCTTTG...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGTCACTTGCAGCGACTaGAGGTTCTGCAGATTTTGT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERVTCSD*RFCRFC
Trigger: ACAAAATCTGCAGAACCTGCAGTCGCTGCAAGTGAC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTCTTGAAACAAGCCATTaGGCTGGTTTGGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERLETSH*AGLGDE
Trigger: TTCATCCCCCAAACCAGCCCAATGGCTTGTTTCAAG...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAGTAGTGATGATGGCTTaGAACCGGTACGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKVVMMA*NRYAPR
Trigger: CCGAGGAGCGTACCGGTTCCAAGCCATCATCACTAC...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTAGGGTCTCCGGAGTTTaGGTTTTTCTTCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERRVSGV*VFLLLH
Trigger: GTGAAGGAGAAGAAAAACCCAAACTCCGGAGACCCT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCAGGGTCTCCGGAGTTTaGGTTTTTCTTCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGRVSGV*VFLLLH
Trigger: GTGAAGGAGAAGAAAAACCCAAACTCCGGAGACCCT...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAAGCCACTCTGCTTTCTaGATATCAAAGGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGSHSAF*ISKELV
Trigger: GACAAGCTCCTTTGATATCCAGAAAGCAGAGTGGCT...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAGGAATGGTCTGGCTCTaGCACCCACACATCAATGTC +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQGMVWL*HPHINV
Trigger: GACATTGATGTGTGGGTGCCAGAGCCAGACCATTCC...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTATCTTTAAAGATGGCTaGGGCAGGCTTGTATTCTGG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAIFKDG*GRLVFW
Trigger: CCAGAATACAAGCCTGCCCCAGCCATCTTTAAAGAT...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCAGGCAATGAGAAGGTaGGTTGCATTTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCQAMRR*VAFAGC
Trigger: ACATCCAGCAAATGCAACCCACCTTCTCATTGCCTG...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTCGACCAATTCTTCTTTaGAAGGAAGACGGCAAACCC +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERRPILL*KEDGKP
Trigger: GGGTTTGCCGTCTTCCTTCCAAAGAAGAATTGGTCG...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAGCGTTCAAACAACTGTaGGTGACGAAGGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKAFKQL*VTKGLL
Trigger: GAGCAGGCCCTTCGTCACCCACAGTTGTTTGAACGC...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAACGAGGGTTGGCTGAATaGAAGTACCTGACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKRGLAE*KYLTLA
Trigger: TGCCAGCGTCAGGTACTTCCATTCAGCCAACCCTCG...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAATGTGAGATCCACGCCTaGAAGCAATCCATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQCEIHA*KQSIGQ
Trigger: CTGGCCAATGGATTGCTTCCAGGCGTGGATCTCACA...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTCCATTCTCCGGACTTTaGCTCTCTGTCCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAPFSGL*LSVLSF
Trigger: AAAAGAAAGGACAGAGAGCCAAAGTCCGGAGAATGG...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAAGTGAGCAGCATCCCTaGGTAAAGTATGTTAGACAG +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGSEQHP*VKYVRQ
Trigger: CTGTCTAACATACTTTACCCAGGGATGCTGCTCACT...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTAGTGAGCAGCATCCCTaGGTAAAGTATGTTAGACAG +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEASEQHP*VKYVRQ
Trigger: CTGTCTAACATACTTTACCCAGGGATGCTGCTCACT...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGGCTGGTTTGGGGGATaGATTGGAGAGCAATTAAAT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCGWFGG*IGEQLN
Trigger: ATTTAATTGCTCTCCAATTCATCCCCCAAACCAGCC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTCCAGTAGCTGTCTGGTaGCCCCACATTGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTPVAVW*PHIGLP
Trigger: TGGCAGTCCAATGTGGGGTCACCAGACAGCTACTGG...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAATGGAAGAGTCTGCTGTaGGGAGGGGGCAGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKWKSLL*GGGSGE
Trigger: CTCGCCACTGCCCCCTCCTCACAGCAGACTCTTCCA...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTGCGTGGTCATTGAAATaGCCCACTGGAGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTAWSLK*PTGGPA
Trigger: CGCAGGACCTCCAGTGGGTCATTTCAATGACCACGC...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTATCTTGTCCAAATGGTaGTTCGTCAAATTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERILSKW*FVKLGE
Trigger: CTCCCCCAATTTGACGAATCACCATTTGGACAAGAT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCTGCTATGTAAATGTTaGTGGTTGGTAGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCLLCKC*WLVDSG
Trigger: CCCACTGTCTACCAACCATCAACATTTACATAGCAG...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAAGGGTTCAAGAAAGTaGAGAAGGCTGAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTKGSRK*RRLNSS
Trigger: GGAACTGTTCAGCCTTCTTCACTTTCTTGAACCCTT...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTAAGGGTTCAAGAAAGTaGAGAAGGCTGAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERKGSRK*RRLNSS
Trigger: GGAACTGTTCAGCCTTCTTCACTTTCTTGAACCCTT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGGTTTAAGGATAGCCTaGAGTTTCTGTACCTGTTCC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCGLRIA*SFCTCS
Trigger: GGAACAGGTACAGAAACTTCAGGCTATCCTTAAACC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTTGATAAGATACGGATaGTTGCAGCATTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEALIRYG*LQHFLS
Trigger: GCTCAGGAAATGCTGCAATCATCCGTATCTTATCAA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGATTGATAAGATACGGATaGTTGCAGCATTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGLIRYG*LQHFLS
Trigger: GCTCAGGAAATGCTGCAATCATCCGTATCTTATCAA...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAGAAGTAACTTATCAATaGGGACCAGTTTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGEVTYQ*GPVYQQ
Trigger: CTGCTGGTAAACTGGTCCTCATTGATAAGTTACTTC...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp CGGTTGATCATTACCCGGTCCTTTGGCCAATATGAGGCTGCCAGCATATATCCAGAAGTAACTTATCAATaGGGACCAGTTTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: RLIITRSFGQYEAASIYPEVTYQ*GPVYQQ
Trigger: CTGCTGGTAAACTGGTCCTCATTGATAAGTTACTTC...TGGATATATGCTGGCAGCCTCATATTGGCCAAAGGACCGGGTAATGATCAACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp CGGTTGATCATTACCCGGTCCTTTGGCCAATATGAGGCTGCCAGCATATATCCATTAACTGCTTTGTTCTaGCCAATTCTGTGGCAACGA +
Preference number: 4 (lower is better)
Translates to: RLIITRSFGQYEAASIYPLTALF*PILWQR
Trigger: TCGTTGCCACAGAATTGGTCAGAACAAAGCAGTTAA...TGGATATATGCTGGCAGCCTCATATTGGCCAAAGGACCGGGTAATGATCAACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTAAGCTGGGTCTGCTCTaGTCGTGTTGTACTTTTCAT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCKLGLL*SCCTFH
Trigger: ATGAAAAGTACAACACGATCAGAGCAGACCCAGCTT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCTCCGGCACATGGACATaGATGCACACAAATACTTCT +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTSGTWT*MHTNTS
Trigger: AGAAGTATTTGTGTGCATTCATGTCCATGTGCCGGA...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCAAACAACTGTGGGTaGCGAAGGGCCTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTSNNCG*RRACSR
Trigger: ACGGGAGCAGGCCCTTCGTCACCCACAGTTGTTTGA...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTAAGCAAATCCCTATCATaGGAGCCACACTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLSKSLS*EPHSHQ
Trigger: CTGGTGGGAGTGTGGCTCTCATGATAGGGATTTGCT...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGGTAGTCGGTCCGGCTaGCCCCATGTTTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKGSRSG*PHVWQH
Trigger: GTGCTGCCAAACATGGGGTCAGCCGGACCGACTACC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTGGGGCAGAAGTCCTTaGGTGAGCCGCCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSWGRSP*VSRLTL
Trigger: CAGAGTAAGGCGGCTCACTCAAGGACTTCTGCCCCA...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAATTGGGTCGTGCTCAGTaGTGCGACACTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKLGRAQ*CDTFLI
Trigger: GATGAGGAAAGTGTCGCATCACTGAGCACGACCCAA...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAGCCTGGAAACTGTCCTaGGTTTCATCTTGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKAWKLS*VSSWVV
Trigger: CACGACCCAAGATGAAACTCAGGACAGTTTCCAGGC...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAGTCCTTTGGCCAATATaGGGCTGCCAGCATATATCC +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQVLWPI*GCQHIS
Trigger: GGATATATGCTGGCAGCCTCATATTGGCCAAAGGAC...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTGCTCCCGAAGGCGAGTaGGGTACTGCTGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICAPEGE*GTAADP
Trigger: TGGGTCAGCAGCAGTACCTCACTCGCCTTCGGGAGC...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGCTCCCGAAGGCGAGTaGGGTACTGCTGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKAPEGE*GTAADP
Trigger: TGGGTCAGCAGCAGTACCTCACTCGCCTTCGGGAGC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAGCTCCCGAAGGCGAGTaGGGTACTGCTGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKAPEGE*GTAADP
Trigger: TGGGTCAGCAGCAGTACCTCACTCGCCTTCGGGAGC...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTGCACCGAGGGTTGGCTaGATGGAAGTACCTGACGCT +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSAPRVG*MEVPDA
Trigger: AGCGTCAGGTACTTCCATTCAGCCAACCCTCGGTGC...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCATCCCGGTGGGAATATaGTTAGGTGGCTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTIPVGI*LGGLFL
Trigger: CAGAAATAAGCCACCTAATCATATTCCCACCGGGAT...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGGAGGACGCCCTCTCTaGACCCTCGTCTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAGGRPL*TLVCAV
Trigger: AACAGCACAGACGAGGGTTCAGAGAGGGCGTCCTCC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TTCTGGAAGAAACCCAGACTGTTTAACAACATCTCCCCATTCAGGAGCCACTCCCATTGGACTGCCATCTaGTACATCTTGAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: FWKKPRLFNNISPFRSHSHWTAI*YILKQA
Trigger: GGCTTGTTTCAAGATGTAGCAGATGGCAGTCCAATG...GGAGTGGCTCCTGAATGGGGAGATGTTGTTAAACAGTCTGGGTTTCTTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTCATTGGACTGCCATCTaGTACATCTTGAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERHWTAI*YILKQA
Trigger: GGCTTGTTTCAAGATGTAGCAGATGGCAGTCCAATG...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTGGCCAAGAGAGTTTTaGCCTGGGTTAAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCWPREF*PGLRLL
Trigger: AAGTAACCTTAACCCAGGGCAAAACTCTCTTGGCCA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTCTGGGAAGTTCATGTaGACGGGCGATAATTTTGAG +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERSGKFM*TGDNFE
Trigger: CTCAAAATTATCGCCCGTGCACATGAACTTCCCAGA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TTCTGGAAGAAACCCAGACTGTTTAACAACATCTCCCCATTCAGGAGCCACTCCTTCAGGGTCAAGTCCTaGAAATGGTTCTGCATGAGA +
Preference number: 4 (lower is better)
Translates to: FWKKPRLFNNISPFRSHSFRVKS*KWFCMR
Trigger: TCTCATGCAGAACCATTTGCAGGACTTGACCCTGAA...GGAGTGGCTCCTGAATGGGGAGATGTTGTTAAACAGTCTGGGTTTCTTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTCGATTGGCCTTTTCTTaGTTGCTTTCTGATTCCACC +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERRLAFS*LLSDST
Trigger: GGTGGAATCAGAAAGCAAGCAAGAAAAGGCCAATCG...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAATTTTCCACAAACAGCTaGAGAGGCTGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKFSTNS*RGCSPG
Trigger: GCCTGGAGAGCAGCCTCTGCAGCTGTTTGTGGAAAA...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTTATCTTTCAAAAGCTaGTGTTCCGTGGCCCACTCA +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCLSFKS*CSVAHS
Trigger: TGAGTGGGCCACGGAACAGCAGCTTTTGAAAGATAA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTCAGGCCGTGAAGCTTaGAGTTGTTCAAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCSGREA*SCSNSS
Trigger: TGAAGAGTTTGAACAACTGCAAGCTTCACGGCCTGA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TTCTGGAAGAAACCCAGACTGTTTAACAACATCTCCCCATTCAGGAGCCACTCCTCAGGCCGTGAAGCTTaGAGTTGTTCAAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: FWKKPRLFNNISPFRSHSSGREA*SCSNSS
Trigger: TGAAGAGTTTGAACAACTGCAAGCTTCACGGCCTGA...GGAGTGGCTCCTGAATGGGGAGATGTTGTTAAACAGTCTGGGTTTCTTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTTCTCTTTCCCAGTTTaGAATGGTAGAAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERFSFPV*NGRKRC
Trigger: GCACCGCTTTCTACCATTGCAAACTGGGAAAGAGAA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTACATCGCCAGTCAATTaGATTAAGTTCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCTSPVN*IKFSTA
Trigger: GGCTGTGGAGAACTTAATGCAATTGACTGGCGATGT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCAGTCTCTTCCTTGGGTaGCAATTTCTTCTCCACATC +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGSLFLG*QFLLHI
Trigger: GATGTGGAGAAGAAATTGGCACCCAAGGAAGAGACT...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTAGTCTCTTCCTTGGGTaGCAATTTCTTCTCCACATC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCSLFLG*QFLLHI
Trigger: GATGTGGAGAAGAAATTGGCACCCAAGGAAGAGACT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAACATAATGGCTCCATATaGCCCTCTTCGAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQHNGSI*PSSKQV
Trigger: GACCTGCTTCGAAGAGGGGCATATGGAGCCATTATG...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTACCTTGTCGTCAGGCTTaGCCACTCTTTCCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLPCRQA*PLFPRS
Trigger: GCTTCTTGGAAAGAGTGGGCAAGCCTGACGACAAGG...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCTTCTGGCTGCAACCATaGGTCTGTCTGTTTCACTTT +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTFWLQP*VCLFHF
Trigger: AAAGTGAAACAGACAGACGCATGGTTGCAGCCAGAA...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCATGGCCAGCAAAGGGTTaGCTGGCACACTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAWPAKG*LAHCQQ
Trigger: CTGCTGGCAGTGTGCCAGGCAACCCTTTGCTGGCCA...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCATGCCCATCAGCCCTaGAGTCACTTGCAGCGACTG +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSHAHQP*SHLQRL
Trigger: CAGTCGCTGCAAGTGACTGCAGGGCTGATGGGCATG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAGCCATTGGGCTGGTTTaGGGGATGAATTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKAIGLV*GMNWRA
Trigger: TGCTCTCCAATTCATCCCCCAAACCAGCCCAATGGC...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAACTGGTGACCCCACATTaGACTGCCATCTGCTACATC +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKLVTPH*TAICYI
Trigger: GATGTAGCAGATGGCAGTCCAATGTGGGGTCACCAG...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TCCTTCGAGTCATTTCCTCGCTTTTCTTCCGCCCCAGACTCTGCAGTCTTTGACCCTTTGCTCTTGCTATaGCCTCTGATATTATACGAT +
Preference number: 4 (lower is better)
Translates to: SFESFPRFSSAPDSAVFDPLLLL*PLILYD
Trigger: ATCGTATAATATCAGAGGCCATAGCAAGAGCAAAGG...GTCAAAGACTGCAGAGTCTGGGGCGGAAGAAAAGCGAGGAAATGACTCGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCAGCCACTCTGCTTTCTaGATATCAAAGGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGSHSAF*ISKELV
Trigger: GACAAGCTCCTTTGATATCCAGAAAGCAGAGTGGCT...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAGGAATGGTCTGGCTCTaGCACCCACACATCAATGTC +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKGMVWL*HPHINV
Trigger: GACATTGATGTGTGGGTGCCAGAGCCAGACCATTCC...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCATCTTTAAAGATGGCTaGGGCAGGCTTGTATTCTGG +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTIFKDG*GRLVFW
Trigger: CCAGAATACAAGCCTGCCCCAGCCATCTTTAAAGAT...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTATCTTTAAAGATGGCTaGGGCAGGCTTGTATTCTGG +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCIFKDG*GRLVFW
Trigger: CCAGAATACAAGCCTGCCCCAGCCATCTTTAAAGAT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAATTAGGGGCTCTGTTCTaGCTGCAACCATGCGTCTGT +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKLGALF*LQPCVC
Trigger: ACAGACGCATGGTTGCAGCCAGAACAGAGCCCCTAA...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTAGTCAGAATCAGAGCTaGACTGGGATCCTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCSQNQS*TGILFC
Trigger: ACAAAAGAGGATCCCAGTCCAGCTCTGATTCTGACT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAGGCTATCCAGCAGTTTaGTGGTATAGAAGGACGCCA +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQGYPAV*WYRRTP
Trigger: TGGCGTCCTTCTATACCACCAAACTGCTGGATAGCC...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATCGAGGGTTGGCTGAATaGAAGTACCTGACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYRGLAE*KYLTLA
Trigger: TGCCAGCGTCAGGTACTTCCATTCAGCCAACCCTCG...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTACTGGAAGCAATCCATTaGCCAGCAAAGGGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLLEAIH*PAKGCL
Trigger: CAGGCAACCCTTTGCTGGCCAATGGATTGCTTCCAG...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAACTGGAAGCAATCCATTaGCCAGCAAAGGGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKLEAIH*PAKGCL
Trigger: CAGGCAACCCTTTGCTGGCCAATGGATTGCTTCCAG...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
3UTR CAA 72 bp CTACTTGGTATTGCTGTAAAAGTGGGGCAGAAGTCCTaGAGTGAGCCGCCTTACTCTGATTGTAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLGIAVKVGQKS*SEPPYSDCSSS
Trigger: AGAGGAACTACAATCAGAGTAAGGCGGCTCACTCAAGGACTTCTGCCCCACTTTTACAGCAATACCAAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCTGTGTTGGAGTACCTTaGACATGGTTTAGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGCVGVP*TWFSES
Trigger: AGACTCACTAAACCATGTTCAAGGTACTCCAACACA...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCGGAGAGCAATTAAATTaGGAGTGTGGAGATAACACG +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTGEQLN*ECGDNT
Trigger: CGTGTTATCTCCACACTCTCAATTTAATTGCTCTCC...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGGTGACTGCTGCACTTaGGGAAGTGTGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAGDCCT*GSVQEG
Trigger: ACCCTCCTGCACACTTCCTCAAGTGCAGCAGTCACC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAAGCGAGACCTGCAGATaGCTGCAGGAGACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKASETCR*LQETAW
Trigger: CCAAGCAGTCTCCTGCAGTCATCTGCAGGTCTCGCT...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCTCTTGCTATGGCCTCTaGTATTATACGATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTSCYGL*YYTIGL
Trigger: AAGGCCAATCGTATAATATCAGAGGCCATAGCAAGA...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCACGGATGATGCGCCCCTaGGAGTCCCTGAAGTACATC +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKARMMRP*ESLKYI
Trigger: GATGTACTTCAGGGACTCTCAGGGGCGCATCATCCG...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAGAAAGTGAAGAAGGCTaGACAGTTCCTCGACTGTGT +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQESEEG*TVPRLC
Trigger: ACACAGTCGAGGAACTGTTCAGCCTTCTTCACTTTC...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTCTCCAAACTCTTGCATaGATGTTGATTCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEALQTLA*MLIQME
Trigger: TTCCATCTGAATCAACATTCATGCAAGAGTTTGGAG...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CATAAGTCTTTCAAAGGAGGAGCAAATGCGCCTCCAACCTTTCTCGCATTCCTTGGTTTAAGGATAGCCTaGAGTTTCTGTACCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HKSFKGGANAPPTFLAFLGLRIA*SFCTCS
Trigger: GGAACAGGTACAGAAACTTCAGGCTATCCTTAAACC...AAGGAATGCGAGAAAGGTTGGAGGCGCATTTGCTCCTCCTTTGAAAGACTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGAAGTAACTTATCAATaGGGACCAGTTTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLEREVTYQ*GPVYQQ
Trigger: CTGCTGGTAAACTGGTCCTCATTGATAAGTTACTTC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTTAACTGCTTTGTTCTaGCCAATTCTGTGGCAACGA +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCLTALF*PILWQR
Trigger: TCGTTGCCACAGAATTGGTCAGAACAAAGCAGTTAA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAAACTGTTTCTGCCACTaGTGGTGTCTATATCTAGTT +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGNCFCH*WCLYLV
Trigger: AACTAGATATAGACACCATCAGTGGCAGAAACAGTT...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAACCTCTCCATCAGCTATaGCCAGGTCGCCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKPLHQL*PGRQVR
Trigger: CCTCACCTGGCGACCTGGTCATAGCTGATGGAGAGG...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGCCTCTCCATCAGCTATaGCCAGGTCGCCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKPLHQL*PGRQVR
Trigger: CCTCACCTGGCGACCTGGTCATAGCTGATGGAGAGG...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATGGCATTGGCAGGCAATaGGAAGGTGGGTTGCATTTG +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYGIGRQ*EGGLHL
Trigger: CAAATGCAACCCACCTTCTCATTGCCTGCCAATGCC...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAGTTTGGCAGCACCAATaGGCAAATCCCTATCATGAG +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQVWQHQ*ANPYHE
Trigger: CTCATGATAGGGATTTGCTCATTGGTGCTGCCAAAC...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATAACAAGGCTAGTCTCTaGTGTGCTCTGAAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYNKASL*CALKLP
Trigger: CGGGAGCTTCAGAGCACATCAGAGACTAGCCTTGTT...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTGGAGGACGCCCTCTCTaGACCCTCGTCTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICGGRPL*TLVCAV
Trigger: AACAGCACAGACGAGGGTTCAGAGAGGGCGTCCTCC...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTTTAGTGAGTCTATGTaGAAAGGCTCAAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAFSESM*KGSNSA
Trigger: TGCAGAGTTTGAGCCTTTGCACATAGACTCACTAAA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTACCCACTGGAGGTCCTaGGTCAACAGGATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTTHWRS*VNRIWE
Trigger: TTCCCAGATCCTGTTGACGCAGGACCTCCAGTGGGT...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTAATGGTAGAAAGCGGTaGAATAATCAGGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCNGRKR*NNQERS
Trigger: GGACCTTTCCTGATTATTGCACCGCTTTCTACCATT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTAATGGTAGAAAGCGGTaGAATAATCAGGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERNGRKR*NNQERS
Trigger: GGACCTTTCCTGATTATTGCACCGCTTTCTACCATT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAACTCCTTGTCCATCTCTaGTGTCTTTCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQLLVHL*CLSILA
Trigger: AGCCAAGATCGAAAGACAGCAGAGATGGACAAGGAG...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCTTTGTCCAATCAAACTaGCCTCTGTCTGGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGFVQSN*PLSGSK
Trigger: TTTTGACCCAGACAGAGGGCAGTTTGATTGGACAAA...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTTTGTCCAATCAAACTaGCCTCTGTCTGGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCFVQSN*PLSGSK
Trigger: TTTTGACCCAGACAGAGGGCAGTTTGATTGGACAAA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTAGTGCTACTTGGTATTaGTGTAAAAGTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERSATWY*CKSGAE
Trigger: TTCTGCCCCACTTTTACAGCAATACCAAGTAGCACT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGGGTCTTCCCTCGTaGAGCTGCACCCTTGGGATA +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSLGLPS*SCTLGI
Trigger: TATCCCAAGGGTGCAGCTGCACGAGGGAAGACCCAA...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTGCCTTCTCCCCCGCCTaGTTACTTCCTCTCTCACAA +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTAFSPA*LLPLSQ
Trigger: TTGTGAGAGAGGAAGTAAGCAGGCGGGGGAGAAGGC...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTAAGAGAGTTTTGCCCTaGGTTAAGGTTACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERKRVLP*VKVTSA
Trigger: AGCAGAAGTAACCTTAACCCAGGGCAAAACTCTCTT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTAAGAGAGTTTTGCCCTaGGTTAAGGTTACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCKRVLP*VKVTSA
Trigger: AGCAGAAGTAACCTTAACCCAGGGCAAAACTCTCTT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTGCAGGAAGTCATACTTaGAGAAGGTCTGTTATAGTT +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAAGSHT*RRSVIV
Trigger: AACTATAACAGACCTTCTCCAAGTATGACTTCCTGC...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAAATTCAGTGATGGAGTaGGGTTCAGGAGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQNSVME*GSGDAE
Trigger: CTCAGCATCTCCTGAACCCCACTCCATCACTGAATT...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTGCAGGAACCTCGGAATaGTCTGGCTCTGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICAGTSE*SGSGTH
Trigger: GTGGGTGCCAGAGCCAGACCATTCCGAGGTTCCTGC...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTAAACTGCCCTCTGTCTaGGTCAAAAACTACTCCAAA +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERKLPSV*VKNYSK
Trigger: TTTGGAGTAGTTTTTGACCCAGACAGAGGGCAGTTT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTAAGTCTGGATTTGGATaGCAAAGCTTCAAGCGTTCA +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCKSGFG*QSFKRS
Trigger: TGAACGCTTGAAGCTTTGCCATCCAAATCCAGACTT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGCAGAAAGTGCTACTTaGTATTGCTGTAAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERAESAT*YCCKSG
Trigger: CCCACTTTTACAGCAATACCAAGTAGCACTTTCTGC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGGGATCCTCTTTTGTaGACTCTCGGTTTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERWDPLL*TLGFLE
Trigger: TTCTAAGAAACCGAGAGTCCACAAAAGAGGATCCCA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTGGGATCCTCTTTTGTaGACTCTCGGTTTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCWDPLL*TLGFLE
Trigger: TTCTAAGAAACCGAGAGTCCACAAAAGAGGATCCCA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTCCAGTAGCTGTCTGGTaGCCCCACATTGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICPVAVW*PHIGLP
Trigger: TGGCAGTCCAATGTGGGGTCACCAGACAGCTACTGG...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAACCAGTAGCTGTCTGGTaGCCCCACATTGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKPVAVW*PHIGLP
Trigger: TGGCAGTCCAATGTGGGGTCACCAGACAGCTACTGG...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAACAAAGCTTTTGTTTTaGTGCAGAGAGTGTGAATGT +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGTKLLF*CRECEC
Trigger: ACATTCACACTCTCTGCATCAAAACAAAAGCTTTGT...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGGTGACTGCTGCACTTaGGGAAGTGTGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKGDCCT*GSVQEG
Trigger: ACCCTCCTGCACACTTCCTCAAGTGCAGCAGTCACC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTATCTTGTGTCAGGCCGTaGAGCTTGCAGTTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLSCVRP*SLQLFK
Trigger: TTTGAACAACTGCAAGCTTCACGGCCTGACACAAGA...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAGGTTTAAGGATAGCCTaGAGTTTCTGTACCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQGLRIA*SFCTCS
Trigger: GGAACAGGTACAGAAACTTCAGGCTATCCTTAAACC...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAGAAAACGAATCGATCTaGATCAGGTTTACTAAATCG +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGENESI*IRFTKS
Trigger: CGATTTAGTAAACCTGATTCAGATCGATTCGTTTTC...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGCTGCTGCAGTTAGGTTaGTGCCCAGACCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKLLQLG*CPDHQL
Trigger: GAGCTGGTGGTCTGGGCATCAACCTAACTGCAGCAG...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTAACTGTTTCTGCCACTaGTGGTGTCTATATCTAGTT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERNCFCH*WCLYLV
Trigger: AACTAGATATAGACACCATCAGTGGCAGAAACAGTT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTTTTTATTAGTTCGCTaGTATGCAGTGATGAGACGT +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAFLLVR*YAVMRR
Trigger: ACGTCTCATCACTGCATATCAGCGAACTAATAAAAA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTGGCATTGGCAGGCAATaGGAAGGTGGGTTGCATTTG +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTGIGRQ*EGGLHL
Trigger: CAAATGCAACCCACCTTCTCATTGCCTGCCAATGCC...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTTCAAACAACTGTGGGTaGCGAAGGGCCTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICSNNCG*RRACSR
Trigger: ACGGGAGCAGGCCCTTCGTCACCCACAGTTGTTTGA...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTAGCAAATCCCTATCATaGGAGCCACACTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSSKSLS*EPHSHQ
Trigger: CTGGTGGGAGTGTGGCTCTCATGATAGGGATTTGCT...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATCCTTTCAGAACTGTCTaGCAAATACTGTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYPFRTV*QILSRR
Trigger: CCGCCTGGACAGTATTTGTCAGACAGTTCTGAAAGG...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAATAATGTCTTCTAGCTaGCGGCCACTTCCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKIMSSS*RPLPFQ
Trigger: CTGAAAGGGAAGTGGCCGTCAGCTAGAAGACATTAT...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTAACAAGGCTAGTCTCTaGTGTGCTCTGAAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSNKASL*CALKLP
Trigger: CGGGAGCTTCAGAGCACATCAGAGACTAGCCTTGTT...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAAGACTCTGCAGTCTTTaGCAGGAGTCCTCCCATGCC +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKARLCSL*QESSHA
Trigger: GGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCT...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAGACCCCACATTGGACTaGCATCTGCTACATCTTGAA +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKDPTLD*HLLHLE
Trigger: TTCAAGATGTAGCAGATGGCAGTCCAATGTGGGGTC...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AAGCCCCTGCTTCTGAAATGTCAACTTCAAGCCACCTTCGTCTTTGATTTTCACTGGCCAAGAGAGTTTTaGCCTGGGTTAAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: KPLLLKCQLQATFVFDFHWPREF*PGLRLL
Trigger: AAGTAACCTTAACCCAGGGCAAAACTCTCTTGGCCA...GTGAAAATCAAAGACGAAGGTGGCTTGAAGTTGACATTTCAGAAGCAGGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR GCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGCACTTGAGGAAGTGTaGAGGAGGGTTTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAALEEV*RRVCSR
Trigger: CCGACTGCAAACCCTCCTGCACACTTCCTCAAGTGC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAATCTGGGAAGTTCATGTaGACGGGCGATAATTTTGAG +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQSGKFM*TGDNFE
Trigger: CTCAAAATTATCGCCCGTGCACATGAACTTCCCAGA...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAATTCAGGGTCAAGTCCTaGAAATGGTTCTGCATGAGA +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQFRVKS*KWFCMR
Trigger: TCTCATGCAGAACCATTTGCAGGACTTGACCCTGAA...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTACTCACCTGGGTATTCTaGAGCTTAGTGTATGTCCCA +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLLTWVF*SLVYVP
Trigger: TGGGACATACACTAAGCTGCAGAATACCCAGGTGAG...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAAAAGTGTGCCCTCTGTaGTTGTCTCAGCTTGAATCG +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKKVCPL*LSQLES
Trigger: CGATTCAAGCTGAGACAAGCACAGAGGGCACACTTT...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAATGTTTTGGAGAGGAGTaGCAGTCAAGAGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKCFGEE*QSRAPC
Trigger: ACAAGGTGCTCTTGACTGGCACTCCTCTCCAAAACA...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCAAATCGATCTATGGCTaGTTGTCGAAGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGKSIYG*LSKISS
Trigger: AGAGGAAATCTTCGACAAGCAGCCATAGATCGATTT...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCACATCAATGTCACTTaGATCAACTCCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCHINVT*INSIKD
Trigger: GTCTTTGATGGAGTTGATGCAAGTGACATTGATGTG...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTAAGGTGGGTTGCATTTaGTGGATGTGTCTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCKVGCI*WMCLFL
Trigger: TAAAAACAGACACATCCAGCAAATGCAACCCACCTT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAATGGCGTTCCATTGTTTaGCTGGAAACTGTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKWRSIV*LETVLS
Trigger: ACTCAGGACAGTTTCCAGGCAAACAATGGAACGCCA...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTCAAAGGAGGAGCAAATaGGCCTCCAACCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTQRRSK*ASNLSR
Trigger: GCGAGAAAGGTTGGAGGCGCATTTGCTCCTCCTTTG...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAACATGCCCATCAGCCCTaGAGTCACTTGCAGCGACTG +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKHAHQP*SHLQRL
Trigger: CAGTCGCTGCAAGTGACTGCAGGGCTGATGGGCATG...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTCCTTTTCTCGTACATaGTTCTTCACCTTTGACATC +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCSFSRT*FFTFDI
Trigger: GATGTCAAAGGTGAAGAAGCATGTACGAGAAAAGGA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTGAAAGATTGGTTAACTaGATGAAACTTCATCGAGTC +
Preference number: 4 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAERLVN*MKLHRV
Trigger: GACTCGATGAAGTTTCATCCAGTTAACCAATCTTTC...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAACTTGAAACAAGCCATTaGGCTGGTTTGGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKLETSH*AGLGDE
Trigger: TTCATCCCCCAAACCAGCCCAATGGCTTGTTTCAAG...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTCTGGTGACCCCACATTaGACTGCCATCTGCTACATC +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTLVTPH*TAICYI
Trigger: GATGTAGCAGATGGCAGTCCAATGTGGGGTCACCAG...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCGTGTTTGATGTTCACTaGCCTGAAATAAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGVFDVH*PEIRQS
Trigger: ACTTTGCCTTATTTCAGGCCAGTGAACATCAAACAC...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGTGTTTGATGTTCACTaGCCTGAAATAAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCVFDVH*PEIRQS
Trigger: ACTTTGCCTTATTTCAGGCCAGTGAACATCAAACAC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCGCAGGAAGTCATACTTaGAGAAGGTCTGTTATAGTT +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTAGSHT*RRSVIV
Trigger: AACTATAACAGACCTTCTCCAAGTATGACTTCCTGC...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTGCGTCAACAGGATCTaGGAAGTTCATGTGCACGGG +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTCVNRI*EVHVHG
Trigger: CCCGTGCACATGAACTTCCCAGATCCTGTTGACGCA...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCCCTTTGCTCTTGCTATaGCCTCTGATATTATACGAT +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGPLLLL*PLILYD
Trigger: ATCGTATAATATCAGAGGCCATAGCAAGAGCAAAGG...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp AGAGAAGGCAAAACCAGTTCAGGAGGAGGTTGCAGAGCCCCAGTCAGTCTTCATTTTGTCCAGCTCCTTTaGATAAAAATGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: REGKTSSGGGCRAPVSLHFVQLL*IKMRSS
Trigger: AGAACTTCTCATTTTTATCCAAAGGAGCTGGACAAA...ATGAAGACTGACTGGGGCTCTGCAACCTCCTCCTGAACTGGTTTTGCCTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTGGAATGGTCTGGCTCTaGCACCCACACATCAATGTC +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTGMVWL*HPHINV
Trigger: GACATTGATGTGTGGGTGCCAGAGCCAGACCATTCC...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTGGAATGGTCTGGCTCTaGCACCCACACATCAATGTC +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSGMVWL*HPHINV
Trigger: GACATTGATGTGTGGGTGCCAGAGCCAGACCATTCC...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTAGGAGGAAGAGGATCTaGAAGAACACGATGAGCGCG +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTRRKRI*KNTMSA
Trigger: CGCGCTCATCGTGTTCTTCCAGATCCTCTTCCTCCT...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATATGAAGATTAAGGCCTaGAGTGAGCAGCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYMKIKA*SEQHPW
Trigger: CCAGGGATGCTGCTCACTCCAGGCCTTAATCTTCAT...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCACAAAGCTTTTGTTTTaGTGCAGAGAGTGTGAATGT +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGTKLLF*CRECEC
Trigger: ACATTCACACTCTCTGCATCAAAACAAAAGCTTTGT...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TTCTGGAAGAAACCCAGACTGTTTAACAACATCTCCCCATTCAGGAGCCACTCCACAAAGCTTTTGTTTTaGTGCAGAGAGTGTGAATGT +
Preference number: 4 (lower is better)
Translates to: FWKKPRLFNNISPFRSHSTKLLF*CRECEC
Trigger: ACATTCACACTCTCTGCATCAAAACAAAAGCTTTGT...GGAGTGGCTCCTGAATGGGGAGATGTTGTTAAACAGTCTGGGTTTCTTCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTACAAAGCTTTTGTTTTaGTGCAGAGAGTGTGAATGT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCTKLLF*CRECEC
Trigger: ACATTCACACTCTCTGCATCAAAACAAAAGCTTTGT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAACTTCTGCTTTGTTGTaGGTGAAGGGAAGAACACTG +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKTSALL*VKGRTL
Trigger: CAGTGTTCTTCCCTTCACTCACAACAAAGCAGAAGT...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAATGCTTCATTCCCCTATaGGGAGAAAAGGAGTTACTT +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQCFIPL*GEKELL
Trigger: AAGTAACTCCTTTTCTCCTCATAGGGGAATGAAGCA...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAATCTTGTCCAAATGGTaGTTCGTCAAATTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKILSKW*FVKLGE
Trigger: CTCCCCCAATTTGACGAATCACCATTTGGACAAGAT...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTAATCTTGTCCAAATGGTaGTTCGTCAAATTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLILSKW*FVKLGE
Trigger: CTCCCCCAATTTGACGAATCACCATTTGGACAAGAT...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTGCTTCTTCTCAGACATaGCCCTCACCTGGGTATTCT +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSASSQT*PSPGYS
Trigger: AGAATACCCAGGTGAGGGTCATGTCTGAGAAGAAGC...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTGCTTCTTCTCAGACATaGCCCTCACCTGGGTATTCT +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTASSQT*PSPGYS
Trigger: AGAATACCCAGGTGAGGGTCATGTCTGAGAAGAAGC...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAATCTTGCTATGGCCTCTaGTATTATACGATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQSCYGL*YYTIGL
Trigger: AAGGCCAATCGTATAATATCAGAGGCCATAGCAAGA...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGAAAACGAATCGATCTaGATCAGGTTTACTAAATCG +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCENESI*IRFTKS
Trigger: CGATTTAGTAAACCTGATTCAGATCGATTCGTTTTC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGAAAACGAATCGATCTaGATCAGGTTTACTAAATCG +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERENESI*IRFTKS
Trigger: CGATTTAGTAAACCTGATTCAGATCGATTCGTTTTC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCTTTTTATTAGTTCGCTaGTATGCAGTGATGAGACGT +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTFLLVR*YAVMRR
Trigger: ACGTCTCATCACTGCATATCAGCGAACTAATAAAAA...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTTTTTATTAGTTCGCTaGTATGCAGTGATGAGACGT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCFLLVR*YAVMRR
Trigger: ACGTCTCATCACTGCATATCAGCGAACTAATAAAAA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATGTTTGGCAGCACCAATaGGCAAATCCCTATCATGAG +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYVWQHQ*ANPYHE
Trigger: CTCATGATAGGGATTTGCTCATTGGTGCTGCCAAAC...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCATTGGGTCGTGCTCAGTaGTGCGACACTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKALGRAQ*CDTFLI
Trigger: GATGAGGAAAGTGTCGCATCACTGAGCACGACCCAA...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTATCACAACGGGACCAGTaGGAATACGTTCAAACATAC +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLSQRDQ*EYVQTY
Trigger: GTATGTTTGAACGTATTCTCACTGGTCCCGTTGTGA...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGAGACTCTGCAGTCTTTaGCAGGAGTCCTCCCATGCC +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKRLCSL*QESSHA
Trigger: GGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCT...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAACAAAGGCTCAAACTCTaGACCCAAGTTCAGTTCATC +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKQRLKL*TQVQFI
Trigger: GATGAACTGAACTTGGGTGCAGAGTTTGAGCCTTTG...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTGCAGTCGGAGAAAACTaGACTGGAAGAGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSAVGEN*TGRVCC
Trigger: ACAGCAGACTCTTCCAGTGCAGTTTTCTCCGACTGC...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGCACTTGAGGAAGTGTaGAGGAGGGTTTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKALEEV*RRVCSR
Trigger: CCGACTGCAAACCCTCCTGCACACTTCCTCAAGTGC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTACGATTGGCCTTTTCTTaGTTGCTTTCTGATTCCACC +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLRLAFS*LLSDST
Trigger: GGTGGAATCAGAAAGCAAGCAAGAAAAGGCCAATCG...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCATTTTCCACAAACAGCTaGAGAGGCTGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAFSTNS*RGCSPG
Trigger: GCCTGGAGAGCAGCCTCTGCAGCTGTTTGTGGAAAA...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTATTCTCTTTCCCAGTTTaGAATGGTAGAAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLFSFPV*NGRKRC
Trigger: GCACCGCTTTCTACCATTGCAAACTGGGAAAGAGAA...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAACATCGCCAGTCAATTaGATTAAGTTCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKTSPVN*IKFSTA
Trigger: GGCTGTGGAGAACTTAATGCAATTGACTGGCGATGT...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTAAGTCTCTTCCTTGGGTaGCAATTTCTTCTCCACATC +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLSLFLG*QFLLHI
Trigger: GATGTGGAGAAGAAATTGGCACCCAAGGAAGAGACT...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGATCTGTAGACTTTAACTaGTTTGTTCTGACCAATTCT +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGSVDFN*FVLTNS
Trigger: AGAATTGGTCAGAACAAAGCAGTTAAAGTCTACAGA...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCATAATGGCTCCATATaGCCCTCTTCGAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSHNGSI*PSSKQV
Trigger: GACCTGCTTCGAAGAGGGGCATATGGAGCCATTATG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTCGTCTTGCAGGAGCTaGTCTGGGTTATATTTCCGC +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSSSCRS*SGLYFR
Trigger: GCGGAAATATAACCCAGAGCAGCTCCTGCAAGACGA...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCGTCTTGCAGGAGCTaGTCTGGGTTATATTTCCGC +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTSSCRS*SGLYFR
Trigger: GCGGAAATATAACCCAGAGCAGCTCCTGCAAGACGA...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAGGGCTCTGTTCTGGCTaGAACCATGCGTCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKGLCSG*NHASVC
Trigger: ACAGACAGACGCATGGTTGCAGCCAGAACAGAGCCC...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAATTGGGTCTTCCCTCGTaGAGCTGCACCCTTGGGATA +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKLGLPS*SCTLGI
Trigger: TATCCCAAGGGTGCAGCTGCACGAGGGAAGACCCAA...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTGCCTTCTCCCCCGCCTaGTTACTTCCTCTCTCACAA +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICAFSPA*LLPLSQ
Trigger: TTGTGAGAGAGGAAGTAAGCAGGCGGGGGAGAAGGC...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGTTTGGGGGATGAATTaGAGAGCAATTAAATTGAGA +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCVWGMN*RAIKLR
Trigger: TCTCAATTTAATTGCTCTCCAATTCATCCCCCAAAC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGCCATTGGGCTGGTTTaGGGGATGAATTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAAIGLV*GMNWRA
Trigger: TGCTCTCCAATTCATCCCCCAAACCAGCCCAATGGC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCACTGGTGACCCCACATTaGACTGCCATCTGCTACATC +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKALVTPH*TAICYI
Trigger: GATGTAGCAGATGGCAGTCCAATGTGGGGTCACCAG...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAGTCAAGTCCTGCAAATaGTTCTGCATGAGAGTCTAC +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKVKSCK*FCMRVY
Trigger: GTAGACTCTCATGCAGAACCATTTGCAGGACTTGAC...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CGGTTGATCATTACCCGGTCCTTTGGCCAATATGAGGCTGCCAGCATATATCCACTGATATTATACGATTaGCCTTTTCTTGCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: RLIITRSFGQYEAASIYPLILYD*PFLACF
Trigger: AAAGCAAGCAAGAAAAGGCCAATCGTATAATATCAG...TGGATATATGCTGGCAGCCTCATATTGGCCAAAGGACCGGGTAATGATCAACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGTAGTGATGATGGCTTaGAACCGGTACGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKVVMMA*NRYAPR
Trigger: CCGAGGAGCGTACCGGTTCCAAGCCATCATCACTAC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGAACCTCGGAATGGTCTaGCTCTGGCACCCACACATC +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKNLGMV*LWHPHI
Trigger: GATGTGTGGGTGCCAGAGCCAGACCATTCCGAGGTT...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAAACCTCGGAATGGTCTaGCTCTGGCACCCACACATC +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKNLGMV*LWHPHI
Trigger: GATGTGTGGGTGCCAGAGCCAGACCATTCCGAGGTT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGAGGCTGCATGGCATTaGCAGGCAATGAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKEAAWH*QAMRRW
Trigger: CCACCTTCTCATTGCCTGCCAATGCCATGCAGCCTC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAAAGTCTGGATTTGGATaGCAAAGCTTCAAGCGTTCA +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQKSGFG*QSFKRS
Trigger: TGAACGCTTGAAGCTTTGCCATCCAAATCCAGACTT...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCATTAGGGGCTCTGTTCTaGCTGCAACCATGCGTCTGT +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKALGALF*LQPCVC
Trigger: ACAGACGCATGGTTGCAGCCAGAACAGAGCCCCTAA...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATGAATCAGAGCTGGACTaGGATCCTCTTTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYESELD*DPLLWT
Trigger: AGTCCACAAAAGAGGATCCCAGTCCAGCTCTGATTC...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTGGCTATCCAGCAGTTTaGTGGTATAGAAGGACGCCA +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTGYPAV*WYRRTP
Trigger: TGGCGTCCTTCTATACCACCAAACTGCTGGATAGCC...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTGATGCCTTTTCTGTTTaGGTCTTCCCTCGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTDAFSV*VFPRAA
Trigger: AGCTGCACGAGGGAAGACCCAAACAGAAAAGGCATC...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTGATGCCTTTTCTGTTTaGGTCTTCCCTCGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSDAFSV*VFPRAA
Trigger: AGCTGCACGAGGGAAGACCCAAACAGAAAAGGCATC...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGATTCAAACATACTTTCTaGAAGAAACCCAGACTGTTT +
Preference number: 4 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGFKHTF*KKPRLF
Trigger: AAACAGTCTGGGTTTCTTCCAGAAAGTATGTTTGAA...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAACCATTCTCCGGACTTTaGCTCTCTGTCCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKPFSGL*LSVLSF
Trigger: AAAAGAAAGGACAGAGAGCCAAAGTCCGGAGAATGG...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATACTTCTGCTTTGTTGTaGGTGAAGGGAAGAACACTG +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYTSALL*VKGRTL
Trigger: CAGTGTTCTTCCCTTCACTCACAACAAAGCAGAAGT...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGGGTTCAGGAGATGCTaGGTGGGTTCTTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAGFRRC*VGSCFI
Trigger: AATGAAGCAAGAACCCACTCAGCATCTCCTGAACCC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTCTTGTGTCAGGCCGTaGAGCTTGCAGTTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSSCVRP*SLQLFK
Trigger: TTTGAACAACTGCAAGCTTCACGGCCTGACACAAGA...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATAAGGGTTCAAGAAAGTaGAGAAGGCTGAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYKGSRK*RRLNSS
Trigger: GGAACTGTTCAGCCTTCTTCACTTTCTTGAACCCTT...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAACTCCAAACTCTTGCATaGATGTTGATTCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQLQTLA*MLIQME
Trigger: TTCCATCTGAATCAACATTCATGCAAGAGTTTGGAG...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATGGTTTAAGGATAGCCTaGAGTTTCTGTACCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYGLRIA*SFCTCS
Trigger: GGAACAGGTACAGAAACTTCAGGCTATCCTTAAACC...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAATTGATAAGATACGGATaGTTGCAGCATTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKLIRYG*LQHFLS
Trigger: GCTCAGGAAATGCTGCAATCATCCGTATCTTATCAA...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTATTAACTGCTTTGTTCTaGCCAATTCTGTGGCAACGA +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLLTALF*PILWQR
Trigger: TCGTTGCCACAGAATTGGTCAGAACAAAGCAGTTAA...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGAACAAGGCTAGTCTCTaGTGTGCTCTGAAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKNKASL*CALKLP
Trigger: CGGGAGCTTCAGAGCACATCAGAGACTAGCCTTGTT...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATCAAAGGCTCAAACTCTaGACCCAAGTTCAGTTCATC +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYQRLKL*TQVQFI
Trigger: GATGAACTGAACTTGGGTGCAGAGTTTGAGCCTTTG...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATAAGGCAAAGTCAGGGTaGGCCACAAAGCTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYKAKSG*ATKLLF
Trigger: AAACAAAAGCTTTGTGGCGCACCCTGACTTTGCCTT...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGCGATAATTTTGAGTTaGTATAATTACCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCAIILS*YNYPED
Trigger: ATCCTCAGGGTAATTATAGCAACTCAAAATTATCGC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGCGATAATTTTGAGTTaGTATAATTACCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERAIILS*YNYPED
Trigger: ATCCTCAGGGTAATTATAGCAACTCAAAATTATCGC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCAAGTACATCTCATATTaGTGTATCATCTGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGKYISY*CIICLL
Trigger: TAGCAGACAGATGATACAGCAATATGAGATGTACTT...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTAAGTACATCTCATATTaGTGTATCATCTGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: YLYLNWRREQCIVTLERCKYISY*CIICLL
Trigger: TAGCAGACAGATGATACAGCAATATGAGATGTACTT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAACCTTGTCGTCAGGCTTaGCCACTCTTTCCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKPCRQA*PLFPRS
Trigger: GCTTCTTGGAAAGAGTGGGCAAGCCTGACGACAAGG...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAAAGGTGGGTTGCATTTaGTGGATGTGTCTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQKVGCI*WMCLFL
Trigger: TAAAAACAGACACATCCAGCAAATGCAACCCACCTT...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTTGTGCTGACTGCTCGTaGTCTTCTCTGACAGCAACG +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICCADCS*SSLTAT
Trigger: CGTTGCTGTCAGAGAAGAGCACGAGCAGTCAGCACA...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAACAGGAGTCCTCCCATaGCTAGCAGATTTGGTAACC +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKATGVLP*LADLVT
Trigger: GGTTACCAAATCTGCTAGGCATGGGAGGACTCCTGT...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGCTGGTGACCCCACATTaGACTGCCATCTGCTACATC +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKLVTPH*TAICYI
Trigger: GATGTAGCAGATGGCAGTCCAATGTGGGGTCACCAG...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTAATTCAGTGATGGAGTaGGGTTCAGGAGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTNSVME*GSGDAE
Trigger: CTCAGCATCTCCTGAACCCCACTCCATCACTGAATT...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGACATGACCCTCACCTaGGTATTCTGCAGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKADMTLT*VFCSLV
Trigger: CACTAAGCTGCAGAATACCCAGGTGAGGGTCATGTC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCCTGATATTATACGATTaGCCTTTTCTTGCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KQGVDHKATPAITLSGTTLILYD*PFLACF
Trigger: AAAGCAAGCAAGAAAAGGCCAATCGTATAATATCAG...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCCTGATATTATACGATTaGCCTTTTCTTGCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGLILYD*PFLACF
Trigger: AAAGCAAGCAAGAAAAGGCCAATCGTATAATATCAG...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGAAAGCTGCTGTTCCGTaGCCCACTCACAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKKAAVP*PTHSGD
Trigger: ATCTCCACTGTGAGTGGGCCACGGAACAGCAGCTTT...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAAAAGCTGCTGTTCCGTaGCCCACTCACAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKKAAVP*PTHSGD
Trigger: ATCTCCACTGTGAGTGGGCCACGGAACAGCAGCTTT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTTTGTCCAGCTCCTTTaGATAAAAATGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: TYLYLNWRREQCIVTLERFVQLL*IKMRSS
Trigger: AGAACTTCTCATTTTTATCCAAAGGAGCTGGACAAA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTCAGGCAATGAGAAGGTaGGTTGCATTTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTQAMRR*VAFAGC
Trigger: ACATCCAGCAAATGCAACCCACCTTCTCATTGCCTG...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCGACCAATTCTTCTTTaGAAGGAAGACGGCAAACCC +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSRPILL*KEDGKP
Trigger: GGGTTTGCCGTCTTCCTTCCAAAGAAGAATTGGTCG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
3UTR CAA 72 bp TTCAGCTGCAGCTTGAGTAAGTGGGACTGCATTGACTaGCTTCCTATAACCCTTAACTTTGTATTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: FSCSLSKWDCID*LPITLNFVFPD
Trigger: ATCTGGAAATACAAAGTTAAGGGTTATAGGAAGCAAGTCAATGCAGTCCCACTTACTCAAGCTGCAGCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATTGTGTTGGAGTACCTTaGACATGGTTTAGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYCVGVP*TWFSES
Trigger: AGACTCACTAAACCATGTTCAAGGTACTCCAACACA...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGGAGAAGGAATAGTGTaGAGGGAACTGTTGCGAGTT +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAGEGIV*RELLRV
Trigger: AACTCGCAACAGTTCCCTTCACACTATTCCTTCTCC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGGGTTCAGGAGATGCTaGGTGGGTTCTTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKGFRRC*VGSCFI
Trigger: AATGAAGCAAGAACCCACTCAGCATCTCCTGAACCC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCTGCTATGTAAATGTTaGTGGTTGGTAGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSLLCKC*WLVDSG
Trigger: CCCACTGTCTACCAACCATCAACATTTACATAGCAG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAGCTTCTTCTCAGACATaGCCCTCACCTGGGTATTCT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKASSQT*PSPGYS
Trigger: AGAATACCCAGGTGAGGGTCATGTCTGAGAAGAAGC...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTCTTTCCCTTCGACTaGAGCACTAGGAAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSFFPFD*STRKVL
Trigger: GAGAACTTTCCTAGTGCTTCAGTCGAAGGGAAAGAA...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTAAGCTGGGTCTGCTCTaGTCGTGTTGTACTTTTCAT +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTKLGLL*SCCTFH
Trigger: ATGAAAAGTACAACACGATCAGAGCAGACCCAGCTT...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGTCCTTTGGCCAATATaGGGCTGCCAGCATATATCC +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKVLWPI*GCQHIS
Trigger: GGATATATGCTGGCAGCCTCATATTGGCCAAAGGAC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGCCTTTCAGAACTGTCTaGCAAATACTGTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKPFRTV*QILSRR
Trigger: CCGCCTGGACAGTATTTGTCAGACAGTTCTGAAAGG...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAACCTTTCAGAACTGTCTaGCAAATACTGTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKPFRTV*QILSRR
Trigger: CCGCCTGGACAGTATTTGTCAGACAGTTCTGAAAGG...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTATCCCGGTGGGAATATaGTTAGGTGGCTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTIPVGI*LGGLFL
Trigger: CAGAAATAAGCCACCTAATCATATTCCCACCGGGAT...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGACAAGGTTGGAAGATaGAGATTAAGGCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKADKVGR*RLRPGV
Trigger: CACTCCAGGCCTTAATCTTCATCTTCCAACCTTGTC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTTCAGGGTCAAGTCCTaGAAATGGTTCTGCATGAGA +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTFRVKS*KWFCMR
Trigger: TCTCATGCAGAACCATTTGCAGGACTTGACCCTGAA...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCAGGCCGTGAAGCTTaGAGTTGTTCAAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTSGREA*SCSNSS
Trigger: TGAAGAGTTTGAACAACTGCAAGCTTCACGGCCTGA...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTCTCTTTCCCAGTTTaGAATGGTAGAAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSFSFPV*NGRKRC
Trigger: GCACCGCTTTCTACCATTGCAAACTGGGAAAGAGAA...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTACATCGCCAGTCAATTaGATTAAGTTCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSTSPVN*IKFSTA
Trigger: GGCTGTGGAGAACTTAATGCAATTGACTGGCGATGT...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTACATCGCCAGTCAATTaGATTAAGTTCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTTSPVN*IKFSTA
Trigger: GGCTGTGGAGAACTTAATGCAATTGACTGGCGATGT...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAAAATCGATCTATGGCTaGTTGTCGAAGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKKSIYG*LSKISS
Trigger: AGAGGAAATCTTCGACAAGCAGCCATAGATCGATTT...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAAAGGTGGGTTGCATTTaGTGGATGTGTCTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKKVGCI*WMCLFL
Trigger: TAAAAACAGACACATCCAGCAAATGCAACCCACCTT...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAGCACATGGACATGAATaGACACAAATACTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKAHGHE*TQILLQ
Trigger: TTGGAGAAGTATTTGTGTGCATTCATGTCCATGTGC...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATAGTGCTACTTGGTATTaGTGTAAAAGTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYSATWY*CKSGAE
Trigger: TTCTGCCCCACTTTTACAGCAATACCAAGTAGCACT...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCACTTGCAGCGACTaGAGGTTCTGCAGATTTTGT +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAVTCSD*RFCRFC
Trigger: ACAAAATCTGCAGAACCTGCAGTCGCTGCAAGTGAC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGACAGGAGTCCTCCCATaGCTAGCAGATTTGGTAACC +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKTGVLP*LADLVT
Trigger: GGTTACCAAATCTGCTAGGCATGGGAGGACTCCTGT...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTACAGGAGTCCTCCCATaGCTAGCAGATTTGGTAACC +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICTGVLP*LADLVT
Trigger: GGTTACCAAATCTGCTAGGCATGGGAGGACTCCTGT...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTATCCTTTTCTCGTACATaGTTCTTCACCTTTGACATC +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLSFSRT*FFTFDI
Trigger: GATGTCAAAGGTGAAGAAGCATGTACGAGAAAAGGA...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp AAGCCCCTGCTTCTGAAATGTCAACTTCAAGCCACCTTCGTCTTTGATTTTCACGTTTGGGGGATGAATTaGAGAGCAATTAAATTGAGA +
Preference number: 4 (lower is better)
Translates to: KPLLLKCQLQATFVFDFHVWGMN*RAIKLR
Trigger: TCTCAATTTAATTGCTCTCCAATTCATCCCCCAAAC...GTGAAAATCAAAGACGAAGGTGGCTTGAAGTTGACATTTCAGAAGCAGGGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCACTTGAAACAAGCCATTaGGCTGGTTTGGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKALETSH*AGLGDE
Trigger: TTCATCCCCCAAACCAGCCCAATGGCTTGTTTCAAG...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAAATTCAGTGATGGAGTaGGGTTCAGGAGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKANSVME*GSGDAE
Trigger: CTCAGCATCTCCTGAACCCCACTCCATCACTGAATT...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTGTCAAGTCCTGCAAATaGTTCTGCATGAGAGTCTAC +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSVKSCK*FCMRVY
Trigger: GTAGACTCTCATGCAGAACCATTTGCAGGACTTGAC...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTAACCATCACTCTTCTTaGAAGATGGAGGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICNHHSS*KMEAAA
Trigger: AGCGGCAGCCTCCATCTTCCAAGAAGAGTGATGGTT...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAAACCATCACTCTTCTTaGAAGATGGAGGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKNHHSS*KMEAAA
Trigger: AGCGGCAGCCTCCATCTTCCAAGAAGAGTGATGGTT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAGACATGACCCTCACCTaGGTATTCTGCAGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKDMTLT*VFCSLV
Trigger: CACTAAGCTGCAGAATACCCAGGTGAGGGTCATGTC...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTAAGATGAGCACTTTATaGCCGCCGGCTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTKMSTL*PPAFIL
Trigger: CAAAATGAAAGCCGGCGGCCATAAAGTGCTCATCTT...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAATTCCCACCAGACTTCTaGTCTCCAGTAGCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKFPPDF*SPVACD
Trigger: ATCACAGGCTACTGGAGACCAGAAGTCTGGTGGGAA...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGTATCCAGCAGTTTGGTaGTATAGAAGGACGCCACCG +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKYPAVW*YRRTPP
Trigger: CGGTGGCGTCCTTCTATACCACCAAACTGCTGGATA...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAGGCTATCCAGCAGTTTaGTGGTATAGAAGGACGCCA +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKGYPAV*WYRRTP
Trigger: TGGCGTCCTTCTATACCACCAAACTGCTGGATAGCC...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCCATTCTCCGGACTTTaGCTCTCTGTCCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSPFSGL*LSVLSF
Trigger: AAAAGAAAGGACAGAGAGCCAAAGTCCGGAGAATGG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTAGTGAGCAGCATCCCTaGGTAAAGTATGTTAGACAG +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSSEQHP*VKYVRQ
Trigger: CTGTCTAACATACTTTACCCAGGGATGCTGCTCACT...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAATGAAGATTAAGGCCTaGAGTGAGCAGCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKMKIKA*SEQHPW
Trigger: CCAGGGATGCTGCTCACTCCAGGCCTTAATCTTCAT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTGTGTTGGAGTACCTTaGACATGGTTTAGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSCVGVP*TWFSES
Trigger: AGACTCACTAAACCATGTTCAAGGTACTCCAACACA...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAGGAGAAGGAATAGTGTaGAGGGAACTGTTGCGAGTT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKGEGIV*RELLRV
Trigger: AACTCGCAACAGTTCCCTTCACACTATTCCTTCTCC...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGGAGAAGGAATAGTGTaGAGGGAACTGTTGCGAGTT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKGEGIV*RELLRV
Trigger: AACTCGCAACAGTTCCCTTCACACTATTCCTTCTCC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAATACAAGATGCGAAGTaGACTGGCGATCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKIQDAK*TGDPGH
Trigger: ATGACCTGGATCGCCAGTTCACTTCGCATCTTGTAT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTTGCTATGGCCTCTaGTATTATACGATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTSCYGL*YYTIGL
Trigger: AAGGCCAATCGTATAATATCAGAGGCCATAGCAAGA...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCATTCTTTCCCTTCGACTaGAGCACTAGGAAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAFFPFD*STRKVL
Trigger: GAGAACTTTCCTAGTGCTTCAGTCGAAGGGAAAGAA...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTTCTTGTGTCAGGCCGTaGAGCTTGCAGTTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICSCVRP*SLQLFK
Trigger: TTTGAACAACTGCAAGCTTCACGGCCTGACACAAGA...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTAGAAAACGAATCGATCTaGATCAGGTTTACTAAATCG +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLENESI*IRFTKS
Trigger: CGATTTAGTAAACCTGATTCAGATCGATTCGTTTTC...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGTTTGGCAGCACCAATaGGCAAATCCCTATCATGAG +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKVWQHQ*ANPYHE
Trigger: CTCATGATAGGGATTTGCTCATTGGTGCTGCCAAAC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAATAATGTCTTCTAGCTaGCGGCCACTTCCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKIMSSS*RPLPFQ
Trigger: CTGAAAGGGAAGTGGCCGTCAGCTAGAAGACATTAT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGTTTTGTTGTAAGGCCTaGAGAGCTGTGAGATCCACG +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKFCCKA*RAVRST
Trigger: CGTGGATCTCACAGCTCTTCAGGCCTTACAACAAAA...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAATTTTGTTGTAAGGCCTaGAGAGCTGTGAGATCCACG +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKFCCKA*RAVRST
Trigger: CGTGGATCTCACAGCTCTTCAGGCCTTACAACAAAA...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCACATTGGACTGCCATCTaGTACATCTTGAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAHWTAI*YILKQA
Trigger: GGCTTGTTTCAAGATGTAGCAGATGGCAGTCCAATG...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGACCCCACATTGGACTaGCATCTGCTACATCTTGAA +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKDPTLD*HLLHLE
Trigger: TTCAAGATGTAGCAGATGGCAGTCCAATGTGGGGTC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGCTCACCTGGGTATTCTaGAGCTTAGTGTATGTCCCA +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKLTWVF*SLVYVP
Trigger: TGGGACATACACTAAGCTGCAGAATACCCAGGTGAG...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAAAAGTGTGCCCTCTGTaGTTGTCTCAGCTTGAATCG +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKKVCPL*LSQLES
Trigger: CGATTCAAGCTGAGACAAGCACAGAGGGCACACTTT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATCTTTTAATTCCCAGGTaGTATCTTCATATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYLLIPR*YLHMAV
Trigger: CACTGCCATATGAAGATAGCACCTGGGAATTAAAAG...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTAGTGCTACTTGGTATTaGTGTAAAAGTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTSATWY*CKSGAE
Trigger: TTCTGCCCCACTTTTACAGCAATACCAAGTAGCACT...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTTGGCGTTCCATTGTTTaGCTGGAAACTGTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICWRSIV*LETVLS
Trigger: ACTCAGGACAGTTTCCAGGCAAACAATGGAACGCCA...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTCATCTTCTGGTGTGTTaGAGTACCTTGAACATGGTT +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTHLLVC*STLNMV
Trigger: AACCATGTTCAAGGTACTCCAACACACCAGAAGATG...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATGCAGGAAGTCATACTTaGAGAAGGTCTGTTATAGTT +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYAGSHT*RRSVIV
Trigger: AACTATAACAGACCTTCTCCAAGTATGACTTCCTGC...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGCGACCAATTCTTCTTTaGAAGGAAGACGGCAAACCC +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKRPILL*KEDGKP
Trigger: GGGTTTGCCGTCTTCCTTCCAAAGAAGAATTGGTCG...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTAAGTCTGGATTTGGATaGCAAAGCTTCAAGCGTTCA +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTKSGFG*QSFKRS
Trigger: TGAACGCTTGAAGCTTTGCCATCCAAATCCAGACTT...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTGCAGAAAGTGCTACTTaGTATTGCTGTAAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSAESAT*YCCKSG
Trigger: CCCACTTTTACAGCAATACCAAGTAGCACTTTCTGC...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGAATCAGAGCTGGACTaGGATCCTCTTTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKESELD*DPLLWT
Trigger: AGTCCACAAAAGAGGATCCCAGTCCAGCTCTGATTC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTGTGCCTTCTCGCTTCTaGACATCTTCTTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICVPSRF*TSSSLS
Trigger: TGACAGTGAAGAAGATGTCCAGAAGCGAGAAGGCAC...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAGTGCCTTCTCGCTTCTaGACATCTTCTTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKVPSRF*TSSSLS
Trigger: TGACAGTGAAGAAGATGTCCAGAAGCGAGAAGGCAC...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGGCTGGTTTGGGGGATaGATTGGAGAGCAATTAAAT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKGWFGG*IGEQLN
Trigger: ATTTAATTGCTCTCCAATTCATCCCCCAAACCAGCC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTGGCTGGTTTGGGGGATaGATTGGAGAGCAATTAAAT +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICGWFGG*IGEQLN
Trigger: ATTTAATTGCTCTCCAATTCATCCCCCAAACCAGCC...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCATGCTTCATTCCCCTATaGGGAGAAAAGGAGTTACTT +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKACFIPL*GEKELL
Trigger: AAGTAACTCCTTTTCTCCTCATAGGGGAATGAAGCA...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGTCCGGCACATGGACATaGATGCACACAAATACTTCT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKSGTWT*MHTNTS
Trigger: AGAAGTATTTGTGTGCATTCATGTCCATGTGCCGGA...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGTCACAACGGGACCAGTaGGAATACGTTCAAACATAC +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKSQRDQ*EYVQTY
Trigger: GTATGTTTGAACGTATTCTCACTGGTCCCGTTGTGA...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAAAGGCAAAGTCAGGGTaGGCCACAAAGCTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKKAKSG*ATKLLF
Trigger: AAACAAAAGCTTTGTGGCGCACCCTGACTTTGCCTT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGTGGCCAAGAGAGTTTTaGCCTGGGTTAAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKWPREF*PGLRLL
Trigger: AAGTAACCTTAACCCAGGGCAAAACTCTCTTGGCCA...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTAGCGATAATTTTGAGTTaGTATAATTACCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLAIILS*YNYPED
Trigger: ATCCTCAGGGTAATTATAGCAACTCAAAATTATCGC...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTTTCAGGGTCAAGTCCTaGAAATGGTTCTGCATGAGA +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICFRVKS*KWFCMR
Trigger: TCTCATGCAGAACCATTTGCAGGACTTGACCCTGAA...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGTTATCTTTCAAAAGCTaGTGTTCCGTGGCCCACTCA +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKLSFKS*CSVAHS
Trigger: TGAGTGGGCCACGGAACAGCAGCTTTTGAAAGATAA...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCTTTTAATTCCCAGGTaGTATCTTCATATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSLLIPR*YLHMAV
Trigger: CACTGCCATATGAAGATAGCACCTGGGAATTAAAAG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAAATGGTAGAAAGCGGTaGAATAATCAGGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKANGRKR*NNQERS
Trigger: GGACCTTTCCTGATTATTGCACCGCTTTCTACCATT...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTATCTGTAGACTTTAACTaGTTTGTTCTGACCAATTCT +
Preference number: 4 (lower is better)
Translates to: QNASHGPGQIDMIERMCLSVDFN*FVLTNS
Trigger: AGAATTGGTCAGAACAAAGCAGTTAAAGTCTACAGA...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAATCTGTAGACTTTAACTaGTTTGTTCTGACCAATTCT +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKSVDFN*FVLTNS
Trigger: AGAATTGGTCAGAACAAAGCAGTTAAAGTCTACAGA...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCACATCAATGTCACTTaGATCAACTCCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSHINVT*INSIKD
Trigger: GTCTTTGATGGAGTTGATGCAAGTGACATTGATGTG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTGCACATGGACATGAATaGACACAAATACTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTAHGHE*TQILLQ
Trigger: TTGGAGAAGTATTTGTGTGCATTCATGTCCATGTGC...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAATTCTGGCTGCAACCATaGGTCTGTCTGTTTCACTTT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKFWLQP*VCLFHF
Trigger: AAAGTGAAACAGACAGACGCATGGTTGCAGCCAGAA...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATGAAAGATTGGTTAACTaGATGAAACTTCATCGAGTC +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYERLVN*MKLHRV
Trigger: GACTCGATGAAGTTTCATCCAGTTAACCAATCTTTC...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAAAGAGAGTTTTGCCCTaGGTTAAGGTTACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAKRVLP*VKVTSA
Trigger: AGCAGAAGTAACCTTAACCCAGGGCAAAACTCTCTT...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTGTCAAGTCCTGCAAATaGTTCTGCATGAGAGTCTAC +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICVKSCK*FCMRVY
Trigger: GTAGACTCTCATGCAGAACCATTTGCAGGACTTGAC...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAATTTGTCCAGCTCCTTTaGATAAAAATGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: NWRREQCIVTLERCHVIKFVQLL*IKMRSS
Trigger: AGAACTTCTCATTTTTATCCAAAGGAGCTGGACAAA...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTAAGATGAGCACTTTATaGCCGCCGGCTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICKMSTL*PPAFIL
Trigger: CAAAATGAAAGCCGGCGGCCATAAAGTGCTCATCTT...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGAGCCACTCTGCTTTCTaGATATCAAAGGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKSHSAF*ISKELV
Trigger: GACAAGCTCCTTTGATATCCAGAAAGCAGAGTGGCT...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGCAGAAAGTGCTACTTaGTATTGCTGTAAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAAESAT*YCCKSG
Trigger: CCCACTTTTACAGCAATACCAAGTAGCACTTTCTGC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAAGTCAGAATCAGAGCTaGACTGGGATCCTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKSQNQS*TGILFC
Trigger: ACAAAAGAGGATCCCAGTCCAGCTCTGATTCTGACT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGAGTCAGAATCAGAGCTaGACTGGGATCCTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKSQNQS*TGILFC
Trigger: ACAAAAGAGGATCCCAGTCCAGCTCTGATTCTGACT...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAATGCTTCATTCCCCTATaGGGAGAAAAGGAGTTACTT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKCFIPL*GEKELL
Trigger: AAGTAACTCCTTTTCTCCTCATAGGGGAATGAAGCA...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGTGCTTCATTCCCCTATaGGGAGAAAAGGAGTTACTT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKCFIPL*GEKELL
Trigger: AAGTAACTCCTTTTCTCCTCATAGGGGAATGAAGCA...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGAAGTAACTTATCAATaGGGACCAGTTTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKEVTYQ*GPVYQQ
Trigger: CTGCTGGTAAACTGGTCCTCATTGATAAGTTACTTC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAAACTGTTTCTGCCACTaGTGGTGTCTATATCTAGTT +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKANCFCH*WCLYLV
Trigger: AACTAGATATAGACACCATCAGTGGCAGAAACAGTT...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTTTTATTAGTTCGCTaGTATGCAGTGATGAGACGT +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSFLLVR*YAVMRR
Trigger: ACGTCTCATCACTGCATATCAGCGAACTAATAAAAA...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCACTTTTAATTCCCAGGTaGTATCTTCATATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKALLIPR*YLHMAV
Trigger: CACTGCCATATGAAGATAGCACCTGGGAATTAAAAG...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTTTTGTCCAATCAAACTaGCCTCTGTCTGGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICFVQSN*PLSGSK
Trigger: TTTTGACCCAGACAGAGGGCAGTTTGATTGGACAAA...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGCACATGGACATGAATaGACACAAATACTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAAHGHE*TQILLQ
Trigger: TTGGAGAAGTATTTGTGTGCATTCATGTCCATGTGC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGCATCTTCTGGTGTGTTaGAGTACCTTGAACATGGTT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKHLLVC*STLNMV
Trigger: AACCATGTTCAAGGTACTCCAACACACCAGAAGATG...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATTTTGTCCAGCTCCTTTaGATAAAAATGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYFVQLL*IKMRSS
Trigger: AGAACTTCTCATTTTTATCCAAAGGAGCTGGACAAA...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAAAACTGCCCTCTGTCTaGGTCAAAAACTACTCCAAA +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKKLPSV*VKNYSK
Trigger: TTTGGAGTAGTTTTTGACCCAGACAGAGGGCAGTTT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGAAACTGCCCTCTGTCTaGGTCAAAAACTACTCCAAA +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKKLPSV*VKNYSK
Trigger: TTTGGAGTAGTTTTTGACCCAGACAGAGGGCAGTTT...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR TCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTCTCCAAACTCTTGCATaGATGTTGATTCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICLQTLA*MLIQME
Trigger: TTCCATCTGAATCAACATTCATGCAAGAGTTTGGAG...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR TCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAAACTGTTTCTGCCACTaGTGGTGTCTATATCTAGTT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKNCFCH*WCLYLV
Trigger: AACTAGATATAGACACCATCAGTGGCAGAAACAGTT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTAATCGCTTGATTTTCTaGTGGATCCTTTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTNRLIF*WILLSF
Trigger: GAAAGATAAAAGGATCCAGCAGAAAATCAAGCGATT...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGCTTTTAATTCCCAGGTaGTATCTTCATATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKLLIPR*YLHMAV
Trigger: CACTGCCATATGAAGATAGCACCTGGGAATTAAAAG...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGAAATCGATCTATGGCTaGTTGTCGAAGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKKSIYG*LSKISS
Trigger: AGAGGAAATCTTCGACAAGCAGCCATAGATCGATTT...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGCACATCAATGTCACTTaGATCAACTCCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKHINVT*INSIKD
Trigger: GTCTTTGATGGAGTTGATGCAAGTGACATTGATGTG...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGAAGGTGGGTTGCATTTaGTGGATGTGTCTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKKVGCI*WMCLFL
Trigger: TAAAAACAGACACATCCAGCAAATGCAACCCACCTT...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGGGGGATGAATTaGAGAGCAATTAAATTGAGA +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAVWGMN*RAIKLR
Trigger: TCTCAATTTAATTGCTCTCCAATTCATCCCCCAAAC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTGTGTTTGATGTTCACTaGCCTGAAATAAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICVFDVH*PEIRQS
Trigger: ACTTTGCCTTATTTCAGGCCAGTGAACATCAAACAC...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGTGTTTGATGTTCACTaGCCTGAAATAAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKVFDVH*PEIRQS
Trigger: ACTTTGCCTTATTTCAGGCCAGTGAACATCAAACAC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCTGATATTATACGATTaGCCTTTTCTTGCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: QKRMDLKKEDMQNISESSLILYD*PFLACF
Trigger: AAAGCAAGCAAGAAAAGGCCAATCGTATAATATCAG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAACCTTTGCTCTTGCTATaGCCTCTGATATTATACGAT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKPLLLL*PLILYD
Trigger: ATCGTATAATATCAGAGGCCATAGCAAGAGCAAAGG...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGCCTTTGCTCTTGCTATaGCCTCTGATATTATACGAT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKPLLLL*PLILYD
Trigger: ATCGTATAATATCAGAGGCCATAGCAAGAGCAAAGG...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTTCAAACATACTTTCTaGAAGAAACCCAGACTGTTT +
Preference number: 4 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTFKHTF*KKPRLF
Trigger: AAACAGTCTGGGTTTCTTCCAGAAAGTATGTTTGAA...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAAATCGCTTGATTTTCTaGTGGATCCTTTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: FRNVWILRKRTCKTSLKANRLIF*WILLSF
Trigger: GAAAGATAAAAGGATCCAGCAGAAAATCAAGCGATT...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAGTTTGGGGGATGAATTaGAGAGCAATTAAATTGAGA +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKVWGMN*RAIKLR
Trigger: TCTCAATTTAATTGCTCTCCAATTCATCCCCCAAAC...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
3UTR CAA 72 bp AGCCTTGGACTTCATAGGTATAATTTGTACATCATTTaGAGATTAGTCAAAGTGCATTTTCAAAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLGLHRYNLYII*RLVKVHFQSGH
Trigger: ATGCCCACTTTGAAAATGCACTTTGACTAATCTCAAAATGATGTACAAATTATACCTATGAAGTCCAAGGCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAGCGATAATTTTGAGTTaGTATAATTACCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKAIILS*YNYPED
Trigger: ATCCTCAGGGTAATTATAGCAACTCAAAATTATCGC...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR GCA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTAATCGCTTGATTTTCTaGTGGATCCTTTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: QRIVRNRTEALDFIGIICNRLIF*WILLSF
Trigger: GAAAGATAAAAGGATCCAGCAGAAAATCAAGCGATT...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR GCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGTCTGTAGACTTTAACTaGTTTGTTCTGACCAATTCT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKSVDFN*FVLTNS
Trigger: AGAATTGGTCAGAACAAAGCAGTTAAAGTCTACAGA...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CCA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGTTCAAACATACTTTCTaGAAGAAACCCAGACTGTTT +
Preference number: 4 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKFKHTF*KKPRLF
Trigger: AAACAGTCTGGGTTTCTTCCAGAAAGTATGTTTGAA...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GGGTGTGGGGACGCTGGGCTCGCCGCGTTCTGTAGCTGCTCCGGGGCTATCCAGGGTAGTGATGATGGCTaGGAACCGGTACGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GCGDAGLAAFCSCSGAIQGSDDG*EPVRSS
Trigger: CGAGGAGCGTACCGGTTCCAAGCCATCATCACTACC...CTGGATAGCCCCGGAGCAGCTACAGAACGCGGCGAGCCCAGCGTCCCCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp GGGTGTGGGGACGCTGGGCTCGCCGCGTTCTGTAGCTGCTCCGGGGCTATCCAGTCTGGTGACCCCACATaGGACTGCCATCTGCTACAT +
Preference number: 5 (lower is better)
Translates to: GCGDAGLAAFCSCSGAIQSGDPT*DCHLLH
Trigger: ATGTAGCAGATGGCAGTCCAATGTGGGGTCACCAGA...CTGGATAGCCCCGGAGCAGCTACAGAACGCGGCGAGCCCAGCGTCCCCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp GGGTGTGGGGACGCTGGGCTCGCCGCGTTCTGTAGCTGCTCCGGGGCTATCCAGAGTGTGCAGGAGGGTTaGCAGTCGGAGAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: GCGDAGLAAFCSCSGAIQSVQEG*QSEKTA
Trigger: TGCAGTTTTCTCCGACTGCAAACCCTCCTGCACACT...CTGGATAGCCCCGGAGCAGCTACAGAACGCGGCGAGCCCAGCGTCCCCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS TCA 90 bp AGCCACCTTCCTTTGACATCTGTGCTGACTGCTCGTGCTCTTCTCTaGCAGCAACGGCTGGGGGTGTGGGGACGCTGGGCTCGCCGCGTT +
Preference number: 5 (lower is better)
Translates to: SHLPLTSVLTARALL*QQRLGVWGRWARRV
Trigger: AACGCGGCGAGCCCAGCGTCCCCACACCCCCAGCCGTTGCTGTCAGAGAAGAGCACGAGCAGTCAGCACAGATGTCAAAGGAAGGTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048665.8
CDS GCA 90 bp CTGCACTTGAGGAAGTGTGCAGGAGGGTTTGCAGTCGGAGAAAACTaGACTGGAAGAGTCTGCTGTGAGGAGGGGGCAGTGGCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LHLRKCAGGFAVGEN*TGRVCCEEGAVARW
Trigger: CCACCTCGCCACTGCCCCCTCCTCACAGCAGACTCTTCCAGTGCAGTTTTCTCCGACTGCAAACCCTCCTGCACACTTCCTCAAGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000211403.2
CDS GCA 90 bp GTCAACTTCAAGCCACCTTCCTTTGACATCTGTGCTGACTGCTCGTaGTCTTCTCTGACAGCAACGGCTGGGGGTGTGGGGACGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VNFKPPSFDICADCS*SSLTATAGGVGTLG
Trigger: GCCCAGCGTCCCCACACCCCCAGCCGTTGCTGTCAGAGAAGAGCACGAGCAGTCAGCACAGATGTCAAAGGAAGGTGGCTTGAAGTTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048665.8
CDS TCA 90 bp AGGAGGGTTTGCAGTCGGAGAAAACTGCACTGGAAGAGTCTGCTGTaGGGAGGGGGCAGTGGCGAGGTGGTTAACGTTAACTCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: RRVCSRRKLHWKSLL*GGGSGEVVNVNSVC
Trigger: GCACACAGAGTTAACGTTAACCACCTCGCCACTGCCCCCTCCTCACAGCAGACTCTTCCAGTGCAGTTTTCTCCGACTGCAAACCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000211403.2
CDS GCA 90 bp TGTGCAGGAGGGTTTGCAGTCGGAGAAAACTGCACTGGAAGAGTCTaGTGTGAGGAGGGGGCAGTGGCGAGGTGGTTAACGTTAACTCTG +
Preference number: 5 (lower is better)
Translates to: CAGGFAVGENCTGRV*CEEGAVARWLTLTL
Trigger: CAGAGTTAACGTTAACCACCTCGCCACTGCCCCCTCCTCACAGCAGACTCTTCCAGTGCAGTTTTCTCCGACTGCAAACCCTCCTGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000211403.2
CDS-3UTR CAA 90 bp CCGCCCCAGACTCTGCAGTCTTTGACAGGAGTCCTCCCATGCCTAGCAGATTTGATGGCTGGGGCAGGCTaGTATTCTGGATCTTCCACA +
Preference number: 5 (lower is better)
Translates to: PPQTLQSLTGVLPCLADLMAGAG*YSGSST
Trigger: TGTGGAAGATCCAGAATACAAGCCTGCCCCAGCCAT...CAAATCTGCTAGGCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTGGGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp GAAGATGAGGAGGAGGAGGAGGAAGATGAGGAGGAGGAGGAAGATGCCGAAGAAGACGGTCCAAGTGTCTaGTGTCAGGCCGTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: EDEEEEEEDEEEEEDAEEDGPSV*CQAVKL
Trigger: AAGCTTCACGGCCTGACACAAGACACTTGGACCGTC...TTCTTCGGCATCTTCCTCCTCCTCCTCATCTTCCTCCTCCTCCTCCTCATCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGACAGCCCTGCAGTCACTaGCAGCGACTGCAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGQPCSH*QRLQVL
Trigger: CAGAACCTGCAGTCGCTGCAAGTGACTGCAGGGCTG...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS GCA 90 bp AGCGAGGCCAGTAGCTGTCTGGTGACCCCACATTGGACTGCCATCTaGTACATCTTGAAACAAGCCATTGGGCTGGTTTGGGGGATGAAT +
Preference number: 5 (lower is better)
Translates to: SEASSCLVTPHWTAI*YILKQAIGLVWGMN
Trigger: ATTCATCCCCCAAACCAGCCCAATGGCTTGTTTCAAGATGTAGCAGATGGCAGTCCAATGTGGGGTCACCAGACAGCTACTGGCCTCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000211403.2
CDS GCA 90 bp GATTTGTATGACCGGGAGCGAGACCTGCAGATGACTGCAGGAGACTaGTTGGTGACACGTGACCACTGGAGAAGGAATAGTGTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: DLYDRERDLQMTAGD*LVTRDHWRRNSVKG
Trigger: TCCCTTCACACTATTCCTTCTCCAGTGGTCACGTGTCACCAAGCAGTCTCCTGCAGTCATCTGCAGGTCTCGCTCCCGGTCATACAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000211403.2
CDS GCA 90 bp GCAGCATCTTCTTCACTTGGATTTTCCACAAACAGCTGCAGAGGCTaGTCTCCAGGCGGAGGAGCCGAGTTCCTCTTAACTCTCAGACTG +
Preference number: 5 (lower is better)
Translates to: AASSSLGFSTNSCRG*SPGGGAEFLLTLRL
Trigger: CAGTCTGAGAGTTAAGAGGAACTCGGCTCCTCCGCCTGGAGAGCAGCCTCTGCAGCTGTTTGTGGAAAATCCAAGTGAAGAAGATGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000210947.2
CDS CCA 90 bp GACCTGCAGATGACTGCAGGAGACTGCTTGGTGACACGTGACCACTaGAGAAGGAATAGTGTGAAGGGAACTGTTGCGAGTTACTCACGG +
Preference number: 5 (lower is better)
Translates to: DLQMTAGDCLVTRDH*RRNSVKGTVASYSR
Trigger: CCGTGAGTAACTCGCAACAGTTCCCTTCACACTATTCCTTCTCCAGTGGTCACGTGTCACCAAGCAGTCTCCTGCAGTCATCTGCAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000211403.2
CDS-3UTR CAA 90 bp CTCCTCCTTCCCCGCCTTTTCTTCACTATAGGCTGGCTGTCGAGTATCGCTCCGCCATCTTCTGGTGTGTaGGAGTACCTTGAACATGGT +
Preference number: 5 (lower is better)
Translates to: LLLPRLFFTIGWLSSIAPPSSGV*EYLEHG
Trigger: ACCATGTTCAAGGTACTCCAACACACCAGAAGATGG...CGGAGCGATACTCGACAGCCAGCCTATAGTGAAGAAAAGGCGGGGAAGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp TCCTTCGAGTCATTTCCTCGCTTTTCTTCCGCCCCAGACTCTGCAGTCTTTGACTCTGTGGCAACGAGCTaGGGCCTGGAGGTCATTTTG +
Preference number: 5 (lower is better)
Translates to: SFESFPRFSSAPDSAVFDSVATS*GLEVIL
Trigger: CAAAATGACCTCCAGGCCCAAGCTCGTTGCCACAGA...GTCAAAGACTGCAGAGTCTGGGGCGGAAGAAAAGCGAGGAAATGACTCGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTTGGCCAGCAAAGGGTaGCCTGGCACACTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERLASKG*PGTLPA
Trigger: TGCTGGCAGTGTGCCAGGCAACCCTTTGCTGGCCAA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS CCA 90 bp GACTTATCAGCATCAAAGTCCCACCACGCAGCAGGAACCTCGGAATaGTCTGGCTCTGGCACCCACACATCAATGTCACTTGCATCAACT +
Preference number: 5 (lower is better)
Translates to: DLSASKSHHAAGTSE*SGSGTHTSMSLAST
Trigger: AGTTGATGCAAGTGACATTGATGTGTGGGTGCCAGAGCCAGACCATTCCGAGGTTCCTGCTGCGTGGTGGGACTTTGATGCTGATAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCGGTAGTGATGATGGCTaGGAACCGGTACGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: KQGVDHKATPAITLSGTTGSDDG*EPVRSS
Trigger: CGAGGAGCGTACCGGTTCCAAGCCATCATCACTACC...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCTTGTAGCCCTCGTCTaGCAGGAGCTGCTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCLVALV*QELLWV
Trigger: AACCCAGAGCAGCTCCTGCAAGACGAGGGCTACAAG...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AGGTTGCAGAGCCCCAGTCAGTCTTCATTGCTCGAGTCTGAGTCCTCGGAGGATCGAAGCAGGACTTTGTaGCAGTGGTGCTTTACATGT +
Preference number: 5 (lower is better)
Translates to: RLQSPSQSSLLESESSEDRSRTL*QWCFTC
Trigger: ACATGTAAAGCACCACTGCAACAAAGTCCTGCTTCG...ATCCTCCGAGGACTCAGACTCGAGCAATGAAGACTGACTGGGGCTCTGCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCGTTGGCACCGAGGGTaGGCTGAATGGAAGTACCTG +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCRWHRG*AEWKYL
Trigger: CAGGTACTTCCATTCAGCCAACCCTCGGTGCCAACG...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTCTGGTGACCCCACATaGGACTGCCATCTGCTACAT +
Preference number: 5 (lower is better)
Translates to: VTLERCHVIKAMGGDGEASGDPT*DCHLLH
Trigger: ATGTAGCAGATGGCAGTCCAATGTGGGGTCACCAGA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCGAACCATCACTCTTCTaGGAAGATGGAGGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: KQGVDHKATPAITLSGTTEPSLF*EDGGCR
Trigger: GCGGCAGCCTCCATCTTCCAAGAAGAGTGATGGTTC...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGAGTGTGCCCTCTGTGCTaGTCTCAGCTTGAATCGCTT +
Preference number: 5 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGVCPLC*SQLESL
Trigger: AAGCGATTCAAGCTGAGACAAGCACAGAGGGCACAC...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCGACGGTCCAAGTGTCTaGTGTCAGGCCGTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: KQGVDHKATPAITLSGTTDGPSV*CQAVKL
Trigger: AAGCTTCACGGCCTGACACAAGACACTTGGACCGTC...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp AGGTTGCAGAGCCCCAGTCAGTCTTCATTGCTCGAGTCTGAGTCCTCGGAGGATCAGTTTACCAGCAGATaGGATCATTGCTTGCAGATG +
Preference number: 5 (lower is better)
Translates to: RLQSPSQSSLLESESSEDQFTSR*DHCLQM
Trigger: CATCTGCAAGCAATGATCCAATCTGCTGGTAAACTG...ATCCTCCGAGGACTCAGACTCGAGCAATGAAGACTGACTGGGGCTCTGCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCGCCTTGTCGTCAGGCTaGCCCACTCTTTCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: KQGVDHKATPAITLSGTTALSSG*PTLSKK
Trigger: CTTCTTGGAAAGAGTGGGCAAGCCTGACGACAAGGC...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGCCTTGTCGTCAGGCTaGCCCACTCTTTCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCALSSG*PTLSKK
Trigger: CTTCTTGGAAAGAGTGGGCAAGCCTGACGACAAGGC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTCGGCTGACCCCATGTTaGGCAGCACCAATGAGCAAA +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERRLTPC*AAPMSK
Trigger: TTTGCTCATTGGTGCTGCCAAACATGGGGTCAGCCG...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAACAGCCCTGCAGTCACTaGCAGCGACTGCAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQQPCSH*QRLQVL
Trigger: CAGAACCTGCAGTCGCTGCAAGTGACTGCAGGGCTG...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTCAGACTCTGCAGTCTTaGACAGGAGTCCTCCCATGC +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERQTLQS*TGVLPC
Trigger: GCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTG...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTTAAGAGCTATGGGCTaGGCAGCTGCAGCTGAACTC +
Preference number: 5 (lower is better)
Translates to: VTLERCHVIKAMGGDGEALRAMG*AAAAEL
Trigger: GAGTTCAGCTGCAGCTGCCAAGCCCATAGCTCTTAA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS TCA 90 bp GTGCAAAGGCTCAAACTCTGCACCCAAGTTCAGTTCATCAACCAGTaGGACAGGTCCGGGCTGTACAAATGTATCATCCGACAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: VQRLKLCTQVQFINQ*DRSGLYKCIIRQAF
Trigger: GAAGGCTTGTCGGATGATACATTTGTACAGCCCGGACCTGTCTCACTGGTTGATGAACTGAACTTGGGTGCAGAGTTTGAGCCTTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000211403.2
CDS CCA 90 bp TCCATTTTGATTAGCGAGGCCAGTAGCTGTCTGGTGACCCCACATTaGACTGCCATCTGCTACATCTTGAAACAAGCCATTGGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: SILISEASSCLVTPH*TAICYILKQAIGLV
Trigger: AACCAGCCCAATGGCTTGTTTCAAGATGTAGCAGATGGCAGTCCAATGTGGGGTCACCAGACAGCTACTGGCCTCGCTAATCAAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000211403.2
CDS-3UTR CAA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCTCTGGTGACCCCACATaGGACTGCCATCTGCTACAT +
Preference number: 5 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGSGDPT*DCHLLH
Trigger: ATGTAGCAGATGGCAGTCCAATGTGGGGTCACCAGA...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCAGTGTGCAGGAGGGTTaGCAGTCGGAGAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGSVQEG*QSEKTA
Trigger: TGCAGTTTTCTCCGACTGCAAACCCTCCTGCACACT...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTAGTGTGCAGGAGGGTTaGCAGTCGGAGAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERSVQEG*QSEKTA
Trigger: TGCAGTTTTCTCCGACTGCAAACCCTCCTGCACACT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CTCCTCCTTCCCCGCCTTTTCTTCACTATAGGCTGGCTGTCGAGTATCGCTCCGGTTTGTCCAGCTCCTTaGGATAAAAATGAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LLLPRLFFTIGWLSSIAPVCPAP*DKNEKF
Trigger: GAACTTCTCATTTTTATCCAAAGGAGCTGGACAAAC...CGGAGCGATACTCGACAGCCAGCCTATAGTGAAGAAAAGGCGGGGAAGGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp CATCTTGGGTCGTGCTCAGTGATGCGACACTTTCCTCATCATAGGCTTTCCTGTCAGGGTCTCCGGAGTTaGGGTTTTTCTTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: HLGSCSVMRHFPHHRLSCQGLRS*GFSSPS
Trigger: TGAAGGAGAAGAAAAACCCAAACTCCGGAGACCCTG...ACAGGAAAGCCTATGATGAGGAAAGTGTCGCATCACTGAGCACGACCCAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAACTTGTAGCCCTCGTCTaGCAGGAGCTGCTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQLVALV*QELLWV
Trigger: AACCCAGAGCAGCTCCTGCAAGACGAGGGCTACAAG...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTATGGCTGGGGCAGGCTaGTATTCTGGATCTTCCACA +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCMAGAG*YSGSST
Trigger: TGTGGAAGATCCAGAATACAAGCCTGCCCCAGCCAT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTCTGGCGTTCCATTGTTaGCCTGGAAACTGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERLAFHC*PGNCPE
Trigger: CTCAGGACAGTTTCCAGGCAAACAATGGAACGCCAG...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCCTGGCGTTCCATTGTTaGCCTGGAAACTGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: KQGVDHKATPAITLSGTTLAFHC*PGNCPE
Trigger: CTCAGGACAGTTTCCAGGCAAACAATGGAACGCCAG...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTTAAGAGCTATGGGCTaGGCAGCTGCAGCTGAACTC +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCLRAMG*AAAAEL
Trigger: GAGTTCAGCTGCAGCTGCCAAGCCCATAGCTCTTAA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTTAAGAGCTATGGGCTaGGCAGCTGCAGCTGAACTC +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERLRAMG*AAAAEL
Trigger: GAGTTCAGCTGCAGCTGCCAAGCCCATAGCTCTTAA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS CCA 90 bp GATTCCACCCTTTTTCGTGGCTTCTTCTCAGACATGACCCTCACCTaGGTATTCTGCAGCTTAGTGTATGTCCCAGAACCATCACTCTTC +
Preference number: 5 (lower is better)
Translates to: DSTLFRGFFSDMTLT*VFCSLVYVPEPSLF
Trigger: GAAGAGTGATGGTTCTGGGACATACACTAAGCTGCAGAATACCCAGGTGAGGGTCATGTCTGAGAAGAAGCCACGAAAAAGGGTGGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000210947.2
ENSMUST00000211403.2
CDS-3UTR CAA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGACCATCTTCTGGTGTGTaGGAGTACCTTGAACATGGT +
Preference number: 5 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGPSSGV*EYLEHG
Trigger: ACCATGTTCAAGGTACTCCAACACACCAGAAGATGG...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCGCCATCTGCTACATCTaGAAACAAGCCATTGGGCTG +
Preference number: 5 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGAICYI*KQAIGL
Trigger: CAGCCCAATGGCTTGTTTCAAGATGTAGCAGATGGC...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp AAGCCCCTGCTTCTGAAATGTCAACTTCAAGCCACCTTCGTCTTTGATTTTCACGAACCATCACTCTTCTaGGAAGATGGAGGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: KPLLLKCQLQATFVFDFHEPSLF*EDGGCR
Trigger: GCGGCAGCCTCCATCTTCCAAGAAGAGTGATGGTTC...GTGAAAATCAAAGACGAAGGTGGCTTGAAGTTGACATTTCAGAAGCAGGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp AGAGAAGGCAAAACCAGTTCAGGAGGAGGTTGCAGAGCCCCAGTCAGTCTTCATCTCAGCTTGAATCGCTaGATTTTCTGCTGGATCCTT +
Preference number: 5 (lower is better)
Translates to: REGKTSSGGGCRAPVSLHLSLNR*IFCWIL
Trigger: AAGGATCCAGCAGAAAATCAAGCGATTCAAGCTGAG...ATGAAGACTGACTGGGGCTCTGCAACCTCCTCCTGAACTGGTTTTGCCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp AGAGAAGGCAAAACCAGTTCAGGAGGAGGTTGCAGAGCCCCAGTCAGTCTTCATTGTGCTTGTCTCAGCTaGAATCGCTTGATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: REGKTSSGGGCRAPVSLHCACLS*NRLIFC
Trigger: GCAGAAAATCAAGCGATTCAAGCTGAGACAAGCACA...ATGAAGACTGACTGGGGCTCTGCAACCTCCTCCTGAACTGGTTTTGCCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTTCCTCGACTGTGTTTaGGAGAGGAGTGCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERFLDCV*ERSASQ
Trigger: TTGACTGGCACTCCTCTCCAAAACACAGTCGAGGAA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTCGATCTATGGCTGCTaGTCGAAGATTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: VTLERCHVIKAMGGDGEASIYGC*SKISSD
Trigger: GTCAGAGGAAATCTTCGACAAGCAGCCATAGATCGA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAATCTGTGGCAACGAGCTaGGGCCTGGAGGTCATTTTG +
Preference number: 5 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQSVATS*GLEVIL
Trigger: CAAAATGACCTCCAGGCCCAAGCTCGTTGCCACAGA...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp AGGTTGCAGAGCCCCAGTCAGTCTTCATTGCTCGAGTCTGAGTCCTCGGAGGATGGATATCAAAGGAGCTaGTCTGAGTCTTTACTTTCT +
Preference number: 5 (lower is better)
Translates to: RLQSPSQSSLLESESSEDGYQRS*SESLLS
Trigger: AGAAAGTAAAGACTCAGACAAGCTCCTTTGATATCC...ATCCTCCGAGGACTCAGACTCGAGCAATGAAGACTGACTGGGGCTCTGCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTCTGTGCTGTTCTCGTaGAGAGGACTAGGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERSVLFS*RGLGSV
Trigger: AACTGAGCCTAGTCCTCTCAACGAGAACAGCACAGA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS CCA 90 bp AGCCTTGTCGTCAGGCTTGCCCACTCTTTCCAAGAAGCACAAAGCTaGGTCTGCTCTGATCGTGTTGTACTTTTCATAACCGTGCTTAAA +
Preference number: 5 (lower is better)
Translates to: SLVVRLAHSFQEAQS*VCSDRVVLFITVLK
Trigger: TTTAAGCACGGTTATGAAAAGTACAACACGATCAGAGCAGACCCAGCTTTGTGCTTCTTGGAAAGAGTGGGCAAGCCTGACGACAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CATAAGTCTTTCAAAGGAGGAGCAAATGCGCCTCCAACCTTTCTCGCATTCCTTCTGGCCAAGAGAGTTTaGCCCTGGGTTAAGGTTACT +
Preference number: 5 (lower is better)
Translates to: HKSFKGGANAPPTFLAFLLAKRV*PWVKVT
Trigger: AGTAACCTTAACCCAGGGCAAAACTCTCTTGGCCAG...AAGGAATGCGAGAAAGGTTGGAGGCGCATTTGCTCCTCCTTTGAAAGACTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAGCCCCGAGCCTGATATaGCAGCTGAGTTTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: NWRREQCIVTLERCHVIKAPSLI*QLSLSH
Trigger: ATGGCTCAAACTCAGCTGCAATATCAGGCTCGGGGC...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AGGTTGCAGAGCCCCAGTCAGTCTTCATTGCTCGAGTCTGAGTCCTCGGAGGATCTACAAGCTAGTATTTaGTCTACAATTGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: RLQSPSQSSLLESESSEDLQASI*STIAAS
Trigger: AGATGCTGCAATTGTAGACAAAATACTAGCTTGTAG...ATCCTCCGAGGACTCAGACTCGAGCAATGAAGACTGACTGGGGCTCTGCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTCTCAGCTTGAATCGCTaGATTTTCTGCTGGATCCTT +
Preference number: 5 (lower is better)
Translates to: VTLERCHVIKAMGGDGEALSLNR*IFCWIL
Trigger: AAGGATCCAGCAGAAAATCAAGCGATTCAAGCTGAG...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGATGTGCTTGTCTCAGCTaGAATCGCTTGATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGCACLS*NRLIFC
Trigger: GCAGAAAATCAAGCGATTCAAGCTGAGACAAGCACA...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAGTGTGCCCTCTGTGCTaGTCTCAGCTTGAATCGCTT +
Preference number: 5 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQVCPLC*SQLESL
Trigger: AAGCGATTCAAGCTGAGACAAGCACAGAGGGCACAC...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCTCGATCTATGGCTGCTaGTCGAAGATTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: KQGVDHKATPAITLSGTTSIYGC*SKISSD
Trigger: GTCAGAGGAAATCTTCGACAAGCAGCCATAGATCGA...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTCTGTTATCAGTTTTCTaGTGTAGCCTAGCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: VTLERCHVIKAMGGDGEALLSVF*CSLARA
Trigger: AGCTCTGGCTAGGCTACACAAGAAAACTGATAACAG...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATCGTTGGCACCGAGGGTaGGCTGAATGGAAGTACCTG +
Preference number: 5 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYRWHRG*AEWKYL
Trigger: CAGGTACTTCCATTCAGCCAACCCTCGGTGCCAACG...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGGCCAGCAAAGGGTaGCCTGGCACACTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSLASKG*PGTLPA
Trigger: TGCTGGCAGTGTGCCAGGCAACCCTTTGCTGGCCAA...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS TCA 90 bp TCTTCTAAAGATGAGAAACCATTAGTTTCCGCGTGGTCATTGAAATaGCCCACTGGAGGTCCTGCGTCAACAGGATCTGGGAAGTTCATG +
Preference number: 5 (lower is better)
Translates to: SSKDEKPLVSAWSLK*PTGGPASTGSGKFM
Trigger: CATGAACTTCCCAGATCCTGTTGACGCAGGACCTCCAGTGGGTCATTTCAATGACCACGCGGAAACTAATGGTTTCTCATCTTTAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000211403.2
CDS TCA 90 bp AAGGTGGGTTGCATTTGCTGGATGTGTCTGTTTTTATTAGTTCGCTaGTATGCAGTGATGAGACGTCTTAGCCGTGTGGTCAGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: KVGCICWMCLFLLVR*YAVMRRLSRVVRAD
Trigger: GTCAGCTCTGACCACACGGCTAAGACGTCTCATCACTGCATATCAGCGAACTAATAAAAACAGACACATCCAGCAAATGCAACCCACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTATCTGGTGACCCCACATaGGACTGCCATCTGCTACAT +
Preference number: 5 (lower is better)
Translates to: QNASHGPGQIDMIERMCLSGDPT*DCHLLH
Trigger: ATGTAGCAGATGGCAGTCCAATGTGGGGTCACCAGA...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTGCACGGGCGATAATTTaGAGTTGCTATAATTACCCT +
Preference number: 5 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAARAII*SCYNYP
Trigger: AGGGTAATTATAGCAACTCAAAATTATCGCCCGTGC...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTGACTCGTTCCTTCTCTaGTGTTTCTTACCCAATGTA +
Preference number: 5 (lower is better)
Translates to: VTLERCHVIKAMGGDGEADSFLL*CFLPNV
Trigger: TACATTGGGTAAGAAACACAAGAGAAGGAACGAGTC...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CGGTTGATCATTACCCGGTCCTTTGGCCAATATGAGGCTGCCAGCATATATCCAGACTCGTTCCTTCTCTaGTGTTTCTTACCCAATGTA +
Preference number: 5 (lower is better)
Translates to: RLIITRSFGQYEAASIYPDSFLL*CFLPNV
Trigger: TACATTGGGTAAGAAACACAAGAGAAGGAACGAGTC...TGGATATATGCTGGCAGCCTCATATTGGCCAAAGGACCGGGTAATGATCAACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCCTCAGCTTGAATCGCTaGATTTTCTGCTGGATCCTT +
Preference number: 5 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGLSLNR*IFCWIL
Trigger: AAGGATCCAGCAGAAAATCAAGCGATTCAAGCTGAG...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTGTGCTTGTCTCAGCTaGAATCGCTTGATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCCACLS*NRLIFC
Trigger: GCAGAAAATCAAGCGATTCAAGCTGAGACAAGCACA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTGGTAGTGATGATGGCTaGGAACCGGTACGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSGSDDG*EPVRSS
Trigger: CGAGGAGCGTACCGGTTCCAAGCCATCATCACTACC...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCAGTTTACCAGCAGATaGGATCATTGCTTGCAGATG +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCQFTSR*DHCLQM
Trigger: CATCTGCAAGCAATGATCCAATCTGCTGGTAAACTG...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCCCGCCGGCTTTCATTTaGGGAAGTAACTTATCAATG +
Preference number: 5 (lower is better)
Translates to: KQGVDHKATPAITLSGTTPPAFI*GSNLSM
Trigger: CATTGATAAGTTACTTCCCAAAATGAAAGCCGGCGG...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTCCGCCGGCTTTCATTTaGGGAAGTAACTTATCAATG +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERPPAFI*GSNLSM
Trigger: CATTGATAAGTTACTTCCCAAAATGAAAGCCGGCGG...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATTCTGCTGCAGTTAGGTaGATGCCCAGACCACCAGCT +
Preference number: 5 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYSAAVR*MPRPPA
Trigger: AGCTGGTGGTCTGGGCATCAACCTAACTGCAGCAGA...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATTCTGTGGCAACGAGCTaGGGCCTGGAGGTCATTTTG +
Preference number: 5 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYSVATS*GLEVIL
Trigger: CAAAATGACCTCCAGGCCCAAGCTCGTTGCCACAGA...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCTTGTAGCCCTCGTCTaGCAGGAGCTGCTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSLVALV*QELLWV
Trigger: AACCCAGAGCAGCTCCTGCAAGACGAGGGCTACAAG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGAAGGTGGGTTGCATTaGCTGGATGTGTCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCEGGLH*LDVSVF
Trigger: AAAAACAGACACATCCAGCAAATGCAACCCACCTTC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAATCAAGCCACCTTCCTTaGACATCTGTGCTGACTGCT +
Preference number: 5 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQSSHLP*TSVLTA
Trigger: AGCAGTCAGCACAGATGTCAAAGGAAGGTGGCTTGA...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048665.8
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTTCCCCAGTCAGACTGTaGATATCTAGTTTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCSPVRL*ISSLFG
Trigger: CCCAAACAAACTAGATATCAACAGTCTGACTGGGGA...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCATTGGCCAGCAAAGGGTaGCCTGGCACACTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: FRNVWILRKRTCKTSLKALASKG*PGTLPA
Trigger: TGCTGGCAGTGTGCCAGGCAACCCTTTGCTGGCCAA...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCACAGCCCTGCAGTCACTaGCAGCGACTGCAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAQPCSH*QRLQVL
Trigger: CAGAACCTGCAGTCGCTGCAAGTGACTGCAGGGCTG...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS TCA 90 bp CTTAGATTTCATCCTCCGACCTCTCTTTTCTTCTTTCCCTTCGACTaGAGCACTAGGAAAGTTCTCAGGGCTCATTACTCGCGGGATATT +
Preference number: 5 (lower is better)
Translates to: LRFHPPTSLFFFPFD*STRKVLRAHYSRDI
Trigger: AATATCCCGCGAGTAATGAGCCCTGAGAACTTTCCTAGTGCTTCAGTCGAAGGGAAAGAAGAAAAGAGAGGTCGGAGGATGAAATCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000210947.2
ENSMUST00000211403.2
CDS TCA 90 bp CCAAATGTTAGAGGGAGGACGGTCCAAGTGTCTTGTGTCAGGCCGTaGAGCTTGCAGTTGTTCAAACTCTTCAATTTTTGCAAGATCTAC +
Preference number: 5 (lower is better)
Translates to: PNVRGRTVQVSCVRP*SLQLFKLFNFCKIY
Trigger: GTAGATCTTGCAAAAATTGAAGAGTTTGAACAACTGCAAGCTTCACGGCCTGACACAAGACACTTGGACCGTCCTCCCTCTAACATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000210947.2
CDS TCA 90 bp AATACACTTTATCCCCTTCCATCAATTGACCCTCTCCATCAGCTATaGCCAGGTCGCCAGGTGAGGAAACGTCATCCTCAATATCATCTT +
Preference number: 5 (lower is better)
Translates to: NTLYPLPSIDPLHQL*PGRQVRKRHPQYHL
Trigger: AAGATGATATTGAGGATGACGTTTCCTCACCTGGCGACCTGGTCATAGCTGATGGAGAGGGTCAATTGATGGAAGGGGATAAAGTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS CCA 90 bp TGCTTTGTTGTGAGTGAAGGGAAGAACACTGTGTTTGATGTTCACTaGCCTGAAATAAGGCAAAGTCAGGGTGCGCCACAAAGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: CFVVSEGKNTVFDVH*PEIRQSQGAPQSFC
Trigger: ACAAAAGCTTTGTGGCGCACCCTGACTTTGCCTTATTTCAGGCCAGTGAACATCAAACACAGTGTTCTTCCCTTCACTCACAACAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000211403.2
CDS-3UTR CAA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAACTGGCCAAGAGAGTTTaGCCCTGGGTTAAGGTTACT +
Preference number: 5 (lower is better)
Translates to: NWRREQCIVTLERCHVIKLAKRV*PWVKVT
Trigger: AGTAACCTTAACCCAGGGCAAAACTCTCTTGGCCAG...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGCACGGGCGATAATTTaGAGTTGCTATAATTACCCT +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERARAII*SCYNYP
Trigger: AGGGTAATTATAGCAACTCAAAATTATCGCCCGTGC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGCACGGGCGATAATTTaGAGTTGCTATAATTACCCT +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCARAII*SCYNYP
Trigger: AGGGTAATTATAGCAACTCAAAATTATCGCCCGTGC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTGCCCCGAGCCTGATATaGCAGCTGAGTTTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTAPSLI*QLSLSH
Trigger: ATGGCTCAAACTCAGCTGCAATATCAGGCTCGGGGC...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCCACTTCTTCTTCAGATaGCTTTCCTTCTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: KQGVDHKATPAITLSGTTHFFFR*LSFCIF
Trigger: GAAGATGCAGAAGGAAAGCAATCTGAAGAAGAAGTG...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCACTTCTTCTTCAGATaGCTTTCCTTCTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCHFFFR*LSFCIF
Trigger: GAAGATGCAGAAGGAAAGCAATCTGAAGAAGAAGTG...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAAACACACACTTTCCTGTACGTGAAGGGTGCTGTGTTCAAAGTTCTCAGTGGCCAGCATCTTCTTCACTaGGATTTTCCACAAACAGCT +
Preference number: 5 (lower is better)
Translates to: QTHTFLYVKGAVFKVLSGQHLLH*DFPQTA
Trigger: AGCTGTTTGTGGAAAATCCAAGTGAAGAAGATGCTG...GCCACTGAGAACTTTGAACACAGCACCCTTCACGTACAGGAAAGTGTGTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTCAGCATCTTCTTCACTaGGATTTTCCACAAACAGCT +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERQHLLH*DFPQTA
Trigger: AGCTGTTTGTGGAAAATCCAAGTGAAGAAGATGCTG...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTGACGGTCCAAGTGTCTaGTGTCAGGCCGTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSDGPSV*CQAVKL
Trigger: AAGCTTCACGGCCTGACACAAGACACTTGGACCGTC...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGGTAGTGATGATGGCTaGGAACCGGTACGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAGSDDG*EPVRSS
Trigger: CGAGGAGCGTACCGGTTCCAAGCCATCATCACTACC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAATTCCTCGACTGTGTTTaGGAGAGGAGTGCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: NWRREQCIVTLERCHVIKFLDCV*ERSASQ
Trigger: TTGACTGGCACTCCTCTCCAAAACACAGTCGAGGAA...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCAGCAGATTGGATCATaGCTTGCAGATGAAAATCAG +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCQQIGS*LADENQ
Trigger: CTGATTTTCATCTGCAAGCAATGATCCAATCTGCTG...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTCTGCTGCAGTTAGGTaGATGCCCAGACCACCAGCT +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSSAAVR*MPRPPA
Trigger: AGCTGGTGGTCTGGGCATCAACCTAACTGCAGCAGA...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTGTGGCAACGAGCTaGGGCCTGGAGGTCATTTTG +
Preference number: 5 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTSVATS*GLEVIL
Trigger: CAAAATGACCTCCAGGCCCAAGCTCGTTGCCACAGA...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAACAGGGTCTCCGGAGTTaGGGTTTTTCTTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: NWRREQCIVTLERCHVIKQGLRS*GFSSPS
Trigger: TGAAGGAGAAGAAAAACCCAAACTCCGGAGACCCTG...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTGGATATCAAAGGAGCTaGTCTGAGTCTTTACTTTCT +
Preference number: 5 (lower is better)
Translates to: VTLERCHVIKAMGGDGEAGYQRS*SESLLS
Trigger: AGAAAGTAAAGACTCAGACAAGCTCCTTTGATATCC...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTACACATCAATGTCACTaGCATCAACTCCATCAAAGA +
Preference number: 5 (lower is better)
Translates to: VTLERCHVIKAMGGDGEATHQCH*HQLHQR
Trigger: TCTTTGATGGAGTTGATGCAAGTGACATTGATGTGT...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAATCGACCAATTCTTCTTaGGAAGGAAGACGGCAAACC +
Preference number: 5 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQSTNSS*EGRRQT
Trigger: GGTTTGCCGTCTTCCTTCCAAAGAAGAATTGGTCGA...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCGGCTGACCCCATGTTaGGCAGCACCAATGAGCAAA +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSRLTPC*AAPMSK
Trigger: TTTGCTCATTGGTGCTGCCAAACATGGGGTCAGCCG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCACGTTGGCACCGAGGGTaGGCTGAATGGAAGTACCTG +
Preference number: 5 (lower is better)
Translates to: FRNVWILRKRTCKTSLKARWHRG*AEWKYL
Trigger: CAGGTACTTCCATTCAGCCAACCCTCGGTGCCAACG...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAATCTGTGCTGTTCTCGTaGAGAGGACTAGGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: NWRREQCIVTLERCHVIKSVLFS*RGLGSV
Trigger: AACTGAGCCTAGTCCTCTCAACGAGAACAGCACAGA...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS TCA 90 bp TTGATTCAGATGGAAACCTTAAGGGTTCAAGAAAGTGAAGAAGGCTaGACAGTTCCTCGACTGTGTTTTGGAGAGGAGTGCCAGTCAAGA +
Preference number: 5 (lower is better)
Translates to: LIQMETLRVQESEEG*TVPRLCFGEECQSR
Trigger: TCTTGACTGGCACTCCTCTCCAAAACACAGTCGAGGAACTGTTCAGCCTTCTTCACTTTCTTGAACCCTTAAGGTTTCCATCTGAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000210947.2
CDS-3UTR CAA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTACCATCTTCTGGTGTGTaGGAGTACCTTGAACATGGT +
Preference number: 5 (lower is better)
Translates to: QNASHGPGQIDMIERMCLPSSGV*EYLEHG
Trigger: ACCATGTTCAAGGTACTCCAACACACCAGAAGATGG...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAACCATCTTCTGGTGTGTaGGAGTACCTTGAACATGGT +
Preference number: 5 (lower is better)
Translates to: NWRREQCIVTLERCHVIKPSSGV*EYLEHG
Trigger: ACCATGTTCAAGGTACTCCAACACACCAGAAGATGG...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGCCCCGAGCCTGATATaGCAGCTGAGTTTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: FRNVWILRKRTCKTSLKAAPSLI*QLSLSH
Trigger: ATGGCTCAAACTCAGCTGCAATATCAGGCTCGGGGC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTCTGATATTATACGATaGGCCTTTTCTTGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: VTLERCHVIKAMGGDGEASDIIR*AFSCLL
Trigger: AAGCAAGCAAGAAAAGGCCAATCGTATAATATCAGA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTACTCGCTCCTTTGCTCTaGCTATGGCCTCTGATATTA +
Preference number: 5 (lower is better)
Translates to: QNASHGPGQIDMIERMCLLAPLL*LWPLIL
Trigger: TAATATCAGAGGCCATAGCAAGAGCAAAGGAGCGAG...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTGTGTGCCCTCTGTGCTaGTCTCAGCTTGAATCGCTT +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSVCPLC*SQLESL
Trigger: AAGCGATTCAAGCTGAGACAAGCACAGAGGGCACAC...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTGTGTGCCCTCTGTGCTaGTCTCAGCTTGAATCGCTT +
Preference number: 5 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTVCPLC*SQLESL
Trigger: AAGCGATTCAAGCTGAGACAAGCACAGAGGGCACAC...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCGTCTATTATACCAATaGAACAAGAGCCAGTTGAGT +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCRLLYQ*NKSQLS
Trigger: ACTCAACTGGCTCTTGTTCAATTGGTATAATAGACG...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTGAAGTACATCTCATATaGCTGTATCATCTGTCTGCT +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCEVHLI*LYHLSA
Trigger: AGCAGACAGATGATACAGCAATATGAGATGTACTTC...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTGTTTGTCCAGCTCCTTaGGATAAAAATGAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERVCPAP*DKNEKF
Trigger: GAACTTCTCATTTTTATCCAAAGGAGCTGGACAAAC...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTAGCTCCATCATGGTATaGACCAAGTTAGGTACATTT +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCSSIMV*TKLGTF
Trigger: AAATGTACCTAACTTGGTCAATACCATGATGGAGCT...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCAACACGTACTGGGATCAGAGGCAGATGGATaGTATGTATCTCTAAATTCT +
Preference number: 5 (lower is better)
Translates to: PQGNTSYNSLRNYQHVLGSEADG*YVSLNS
Trigger: AGAATTTAGAGATACATACAATCCATCTGCCTCTGA...TCCCAGTACGTGTTGGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp GTGACACTAGAGCGTTGTCATGTAATTAAAGCGATGGGTGGTGACGGAGAGGCTTCAGAGGCAGATGGATaGTATGTATCTCTAAATTCT +
Preference number: 5 (lower is better)
Translates to: VTLERCHVIKAMGGDGEASEADG*YVSLNS
Trigger: AGAATTTAGAGATACATACAATCCATCTGCCTCTGA...AGCCTCTCCGTCACCACCCATCGCTTTAATTACATGACAACGCTCTAGTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCATCTGCTGCAGTTAGGTaGATGCCCAGACCACCAGCT +
Preference number: 5 (lower is better)
Translates to: FRNVWILRKRTCKTSLKASAAVR*MPRPPA
Trigger: AGCTGGTGGTCTGGGCATCAACCTAACTGCAGCAGA...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCGGATATCAAAGGAGCTaGTCTGAGTCTTTACTTTCT +
Preference number: 5 (lower is better)
Translates to: KQGVDHKATPAITLSGTTGYQRS*SESLLS
Trigger: AGAAAGTAAAGACTCAGACAAGCTCCTTTGATATCC...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCACACATCAATGTCACTaGCATCAACTCCATCAAAGA +
Preference number: 5 (lower is better)
Translates to: KQGVDHKATPAITLSGTTTHQCH*HQLHQR
Trigger: TCTTTGATGGAGTTGATGCAAGTGACATTGATGTGT...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTATGGCTGGGGCAGGCTaGTATTCTGGATCTTCCACA +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSMAGAG*YSGSST
Trigger: TGTGGAAGATCCAGAATACAAGCCTGCCCCAGCCAT...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTATAAAACACCGTTCTTaGGACTTACAGGCTCAGATT +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERIKHRS*DLQAQI
Trigger: AATCTGAGCCTGTAAGTCCAAAGAACGGTGTTTTAT...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATTCTGTGCTGTTCTCGTaGAGAGGACTAGGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYSVLFS*RGLGSV
Trigger: AACTGAGCCTAGTCCTCTCAACGAGAACAGCACAGA...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS TCA 90 bp GCTGAGTTTGAGCCATGTCAGAAGGCCTCGATACAAGATGCGAAGTaGACTGGCGATCCAGGTCATGATCTAAAACATGATTTGAATTAT +
Preference number: 5 (lower is better)
Translates to: AEFEPCQKASIQDAK*TGDPGHDLKHDLNY
Trigger: ATAATTCAAATCATGTTTTAGATCATGACCTGGATCGCCAGTTCACTTCGCATCTTGTATCGAGGCCTTCTGACATGGCTCAAACTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000211403.2
CDS TCA 90 bp TGCATGAATGTTGATTCAGATGGAAACCTTAAGGGTTCAAGAAAGTaGAGAAGGCTGAACAGTTCCTCGACTGTGTTTTGGAGAGGAGTG +
Preference number: 5 (lower is better)
Translates to: CMNVDSDGNLKGSRK*RRLNSSSTVFWRGV
Trigger: CACTCCTCTCCAAAACACAGTCGAGGAACTGTTCAGCCTTCTTCACTTTCTTGAACCCTTAAGGTTTCCATCTGAATCAACATTCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000210947.2
CDS GCA 90 bp TTTGCTCTTGCTATGGCCTCTGATATTATACGATTGGCCTTTTCTTaGTTGCTTTCTGATTCCACCCTTTTTCGTGGCTTCTTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: FALAMASDIIRLAFS*LLSDSTLFRGFFSD
Trigger: GTCTGAGAAGAAGCCACGAAAAAGGGTGGAATCAGAAAGCAAGCAAGAAAAGGCCAATCGTATAATATCAGAGGCCATAGCAAGAGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000210947.2
ENSMUST00000211403.2
CDS GCA 90 bp GTTAAAGGGTTCTTCTTCCATATCTGCCAAAAAGTGTGCCCTCTGTaGTTGTCTCAGCTTGAATCGCTTGATTTTCTGCTGGATCCTTTT +
Preference number: 5 (lower is better)
Translates to: VKGFFFHICQKVCPL*LSQLESLDFLLDPF
Trigger: AAAAGGATCCAGCAGAAAATCAAGCGATTCAAGCTGAGACAAGCACAGAGGGCACACTTTTTGGCAGATATGGAAGAAGAACCCTTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000210947.2
CDS GCA 90 bp TTCTTGTGTAGCCTAGCCAGAGCTCTGAATTTTGTCCAATCAAACTaGCCTCTGTCTGGGTCAAAAACTACTCCAAATGTAGACACAACT +
Preference number: 5 (lower is better)
Translates to: FLCSLARALNFVQSN*PLSGSKTTPNVDTT
Trigger: AGTTGTGTCTACATTTGGAGTAGTTTTTGACCCAGACAGAGGGCAGTTTGATTGGACAAAATTCAGAGCTCTGGCTAGGCTACACAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAGAACCATCACTCTTCTaGGAAGATGGAGGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKEPSLF*EDGGCR
Trigger: GCGGCAGCCTCCATCTTCCAAGAAGAGTGATGGTTC...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCTCTGATATTATACGATaGGCCTTTTCTTGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: KQGVDHKATPAITLSGTTSDIIR*AFSCLL
Trigger: AAGCAAGCAAGAAAAGGCCAATCGTATAATATCAGA...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp ACATACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTCTGATATTATACGATaGGCCTTTTCTTGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: TYLYLNWRREQCIVTLERSDIIR*AFSCLL
Trigger: AAGCAAGCAAGAAAAGGCCAATCGTATAATATCAGA...ACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AAACAAGGGGTAGACCACAAGGCAACACCAGCTATAACTCTCTCAGGAACTACCCTACAAGCTAGTATTTaGTCTACAATTGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: KQGVDHKATPAITLSGTTLQASI*STIAAS
Trigger: AGATGCTGCAATTGTAGACAAAATACTAGCTTGTAG...GGTAGTTCCTGAGAGAGTTATAGCTGGTGTTGCCTTGTGGTCTACCCCTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp TACTTGTACCTGAATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCTACAAGCTAGTATTTaGTCTACAATTGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: YLYLNWRREQCIVTLERCLQASI*STIAAS
Trigger: AGATGCTGCAATTGTAGACAAAATACTAGCTTGTAG...ACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATTCAGGTACAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGGACGGTCCAAGTGTCTaGTGTCAGGCCGTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKDGPSV*CQAVKL
Trigger: AAGCTTCACGGCCTGACACAAGACACTTGGACCGTC...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTTCCTCGACTGTGTTTaGGAGAGGAGTGCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTFLDCV*ERSASQ
Trigger: TTGACTGGCACTCCTCTCCAAAACACAGTCGAGGAA...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAATAATAGTCTCTTCCTaGGGTGCCAATTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQIIVSS*GANFFS
Trigger: GGAGAAGAAATTGGCACCCAAGGAAGAGACTATTAT...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAATCTGCTGCAGTTAGGTaGATGCCCAGACCACCAGCT +
Preference number: 5 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKSAAVR*MPRPPA
Trigger: AGCTGGTGGTCTGGGCATCAACCTAACTGCAGCAGA...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTGCCTTGTCGTCAGGCTaGCCCACTCTTTCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: QRIVRNRTEALDFIGIICALSSG*PTLSKK
Trigger: CTTCTTGGAAAGAGTGGGCAAGCCTGACGACAAGGC...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAACGGCTGACCCCATGTTaGGCAGCACCAATGAGCAAA +
Preference number: 5 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKRLTPC*AAPMSK
Trigger: TTTGCTCATTGGTGCTGCCAAACATGGGGTCAGCCG...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCACTGGCGTTCCATTGTTaGCCTGGAAACTGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: FRNVWILRKRTCKTSLKALAFHC*PGNCPE
Trigger: CTCAGGACAGTTTCCAGGCAAACAATGGAACGCCAG...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGCAGACTCTGCAGTCTTaGACAGGAGTCCTCCCATGC +
Preference number: 5 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKQTLQS*TGVLPC
Trigger: GCATGGGAGGACTCCTGTCAAAGACTGCAGAGTCTG...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS TCA 90 bp CTTAACTGTTCAAAATCTGCCATCTTCTGGTGTGTTGGAGTACCTTaGACATGGTTTAGTGAGTCTATGTGCAAAGGCTCAAACTCTGCA +
Preference number: 5 (lower is better)
Translates to: LNCSKSAIFWCVGVP*TWFSESMCKGSNSA
Trigger: TGCAGAGTTTGAGCCTTTGCACATAGACTCACTAAACCATGTTCAAGGTACTCCAACACACCAGAAGATGGCAGATTTTGAACAGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
ENSMUST00000211403.2
CDS-3UTR CAA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCACTGGCCAAGAGAGTTTaGCCCTGGGTTAAGGTTACT +
Preference number: 5 (lower is better)
Translates to: FRNVWILRKRTCKTSLKALAKRV*PWVKVT
Trigger: AGTAACCTTAACCCAGGGCAAAACTCTCTTGGCCAG...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAAGTGTGCAGGAGGGTTaGCAGTCGGAGAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKSVQEG*QSEKTA
Trigger: TGCAGTTTTCTCCGACTGCAAACCCTCCTGCACACT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAGCACGGGCGATAATTTaGAGTTGCTATAATTACCCT +
Preference number: 5 (lower is better)
Translates to: NWRREQCIVTLERCHVIKARAII*SCYNYP
Trigger: AGGGTAATTATAGCAACTCAAAATTATCGCCCGTGC...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTCTCGCTCCTTTGCTCTaGCTATGGCCTCTGATATTA +
Preference number: 5 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTLAPLL*LWPLIL
Trigger: TAATATCAGAGGCCATAGCAAGAGCAAAGGAGCGAG...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCTCGCTCCTTTGCTCTaGCTATGGCCTCTGATATTA +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSLAPLL*LWPLIL
Trigger: TAATATCAGAGGCCATAGCAAGAGCAAAGGAGCGAG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAAAATGCAAGTCACGGTCCTGGCCAAATTGACATGATAGAGAGGATGTGTTTAGACTCGTTCCTTCTCTaGTGTTTCTTACCCAATGTA +
Preference number: 5 (lower is better)
Translates to: QNASHGPGQIDMIERMCLDSFLL*CFLPNV
Trigger: TACATTGGGTAAGAAACACAAGAGAAGGAACGAGTC...TAAACACATCCTCTCTATCATGTCAATTTGGCCAGGACCGTGACTTGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATCTCAGCTTGAATCGCTaGATTTTCTGCTGGATCCTT +
Preference number: 5 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYLSLNR*IFCWIL
Trigger: AAGGATCCAGCAGAAAATCAAGCGATTCAAGCTGAG...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAACAGCAGATTGGATCATaGCTTGCAGATGAAAATCAG +
Preference number: 5 (lower is better)
Translates to: NWRREQCIVTLERCHVIKQQIGS*LADENQ
Trigger: CTGATTTTCATCTGCAAGCAATGATCCAATCTGCTG...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AAGCCCCTGCTTCTGAAATGTCAACTTCAAGCCACCTTCGTCTTTGATTTTCACACACATCAATGTCACTaGCATCAACTCCATCAAAGA +
Preference number: 5 (lower is better)
Translates to: KPLLLKCQLQATFVFDFHTHQCH*HQLHQR
Trigger: TCTTTGATGGAGTTGATGCAAGTGACATTGATGTGT...GTGAAAATCAAAGACGAAGGTGGCTTGAAGTTGACATTTCAGAAGCAGGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAAATGGCTGGGGCAGGCTaGTATTCTGGATCTTCCACA +
Preference number: 5 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKMAGAG*YSGSST
Trigger: TGTGGAAGATCCAGAATACAAGCCTGCCCCAGCCAT...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTCGACCAATTCTTCTTaGGAAGGAAGACGGCAAACC +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSSTNSS*EGRRQT
Trigger: GGTTTGCCGTCTTCCTTCCAAAGAAGAATTGGTCGA...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AGTTTTCCCATAGGAAAGAACTGGGGTACTCCTCCCAAATTTACCACCTTGCAAATAAAACACCGTTCTTaGGACTTACAGGCTCAGATT +
Preference number: 5 (lower is better)
Translates to: SFPIGKNWGTPPKFTTLQIKHRS*DLQAQI
Trigger: AATCTGAGCCTGTAAGTCCAAAGAACGGTGTTTTAT...TTGCAAGGTGGTAAATTTGGGAGGAGTACCCCAGTTCTTTCCTATGGGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTGACTGGGATCCTCTTTaGTGGACTCTCGGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSDWDPL*WTLGFL
Trigger: TAAGAAACCGAGAGTCCACAAAAGAGGATCCCAGTC...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAAAGCCTTGTCCCGTCTTaGAGATTAATAACTGGAACA +
Preference number: 5 (lower is better)
Translates to: NWRREQCIVTLERCHVIKSLVPS*RLITGT
Trigger: TGTTCCAGTTATTAATCTCAAAGACGGGACAAGGCT...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTATTGAAACACTCCACTGCAAACCAAGGTAACGGTCTGAAAAACTTTGGCTATTCCCCAGTCAGACTGTaGATATCTAGTTTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: VLKHSTANQGNGLKNFGYSPVRL*ISSLFG
Trigger: CCCAAACAAACTAGATATCAACAGTCTGACTGGGGA...ATAGCCAAAGTTTTTCAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCATGCTTCTTCACCTTaGACATCTGTGCTGACTGCT +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSHASSP*TSVLTA
Trigger: AGCAGTCAGCACAGATGTCAAAGGTGAAGAAGCATG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS GCA 90 bp GATAATTCAGCCAATTCATCTTTTGTGGCACTAAAGGGTCTGGTTTaGTTCCGAATTCTTGGGGTGTCAATAACTAAACTGTTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: DNSANSSFVALKGLV*FRILGVSITKLFLP
Trigger: TGGCAGAAACAGTTTAGTTATTGACACCCCAAGAATTCGGAAGCAAACCAGACCCTTTAGTGCCACAAAAGATGAATTGGCTGAATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AAGCCCCTGCTTCTGAAATGTCAACTTCAAGCCACCTTCGTCTTTGATTTTCACTCTGATATTATACGATaGGCCTTTTCTTGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: KPLLLKCQLQATFVFDFHSDIIR*AFSCLL
Trigger: AAGCAAGCAAGAAAAGGCCAATCGTATAATATCAGA...GTGAAAATCAAAGACGAAGGTGGCTTGAAGTTGACATTTCAGAAGCAGGGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209203.2
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTGTGCTTGTCTCAGCTaGAATCGCTTGATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSCACLS*NRLIFC
Trigger: GCAGAAAATCAAGCGATTCAAGCTGAGACAAGCACA...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp AATTGGAGACGTGAGCAGTGCATCGTGACACTAGAGCGTTGTCATGTAATTAAACGTCTATTATACCAATaGAACAAGAGCCAGTTGAGT +
Preference number: 5 (lower is better)
Translates to: NWRREQCIVTLERCHVIKRLLYQ*NKSQLS
Trigger: ACTCAACTGGCTCTTGTTCAATTGGTATAATAGACG...TTTAATTACATGACAACGCTCTAGTGTCACGATGCACTGCTCACGTCTCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp ATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCTAAATTCCTCGACTGTGTTTaGGAGAGGAGTGCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: ILRKRTCKTSLKAVCTSKFLDCV*ERSASQ
Trigger: TTGACTGGCACTCCTCTCCAAAACACAGTCGAGGAA...TTTAGAAGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCAGTTTACCAGCAGATaGGATCATTGCTTGCAGATG +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSQFTSR*DHCLQM
Trigger: CATCTGCAAGCAATGATCCAATCTGCTGGTAAACTG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTCAGTTTACCAGCAGATaGGATCATTGCTTGCAGATG +
Preference number: 5 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTQFTSR*DHCLQM
Trigger: CATCTGCAAGCAATGATCCAATCTGCTGGTAAACTG...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCCGCCGGCTTTCATTTaGGGAAGTAACTTATCAATG +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSPPAFI*GSNLSM
Trigger: CATTGATAAGTTACTTCCCAAAATGAAAGCCGGCGG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCATCGATCTATGGCTGCTaGTCGAAGATTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: FRNVWILRKRTCKTSLKASIYGC*SKISSD
Trigger: GTCAGAGGAAATCTTCGACAAGCAGCCATAGATCGA...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTCAGGGTCTCCGGAGTTaGGGTTTTTCTTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: QRIVRNRTEALDFIGIICQGLRS*GFSSPS
Trigger: TGAAGGAGAAGAAAAACCCAAACTCCGGAGACCCTG...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp TATACGTGTATGTATCTGATAGTACATCGAGTTCAGAAACGTATGGATCTTAAGCAGGGTCTCCGGAGTTaGGGTTTTTCTTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: YTCMYLIVHRVQKRMDLKQGLRS*GFSSPS
Trigger: TGAAGGAGAAGAAAAACCCAAACTCCGGAGACCCTG...CTTAAGATCCATACGTTTCTGAACTCGATGTACTATCAGATACATACACGTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCACGAAGCAGGACTTTGTaGCAGTGGTGCTTTACATGT +
Preference number: 5 (lower is better)
Translates to: FRNVWILRKRTCKTSLKARSRTL*QWCFTC
Trigger: ACATGTAAAGCACCACTGCAACAAAGTCCTGCTTCG...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTGAAGGTGGGTTGCATTaGCTGGATGTGTCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSEGGLH*LDVSVF
Trigger: AAAAACAGACACATCCAGCAAATGCAACCCACCTTC...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209203.2
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCTGTTATCAGTTTTCTaGTGTAGCCTAGCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: QKRMDLKKEDMQNISESSLLSVF*CSLARA
Trigger: AGCTCTGGCTAGGCTACACAAGAAAACTGATAACAG...ACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp TTCAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGACTGGGATCCTCTTTaGTGGACTCTCGGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: FRNVWILRKRTCKTSLKADWDPL*WTLGFL
Trigger: TAAGAAACCGAGAGTCCACAAAAGAGGATCCCAGTC...TGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATACGTTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp GTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTTTGCACTTCCCCAGTCAGACTGTaGATATCTAGTTTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: VWILRKRTCKTSLKAVCTSPVRL*ISSLFG
Trigger: CCCAAACAAACTAGATATCAACAGTCTGACTGGGGA...AGTGCAAACTGCTTTCAGAGATGTTTTGCATGTCCTCTTTCTTAAGATCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
ENSMUST00000209423.2
CDS-3UTR CAA 90 bp CAAAGGATTGTAAGAAACAGAACAGAAGCCTTGGACTTCATAGGTATAATTTGTCTCGCTCCTTTGCTCTaGCTATGGCCTCTGATATTA +
Preference number: 5 (lower is better)
Translates to: QRIVRNRTEALDFIGIICLAPLL*LWPLIL
Trigger: TAATATCAGAGGCCATAGCAAGAGCAAAGGAGCGAG...ACAAATTATACCTATGAAGTCCAAGGCTTCTGTTCTGTTTCTTACAATCCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048665.8
ENSMUST00000109614.9
CDS-3UTR CAA 90 bp CAGAAACGTATGGATCTTAAGAAAGAGGACATGCAAAACATCTCTGAAAGCAGTCACTTCTTCTTCAGATaGCTTTC