RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHD6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057133

Ensembl transcript IDs: ENSMUST00000039782.14, ENSMUST00000130265.2, ENSMUST00000134178.8

Found 511 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCTGTCTAGCCCCTGAGCCTGTGCTCCAGAGAACTAGGTTTGGCTaGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGG +
Preference number: 1 (lower is better)
Translates to: TCLAPEPVLQRTRFG*FKSQQGLSLEETLR
Trigger: CCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAACCTAGTTCTCTGGAGCACAGGCTCAGGGGCTAGACAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 90 bp AACGGGTGGCAGCAGTTGTCCTGGGATAAATGCCAGCAGCATCTGTaGACCCTGAGCAGCGCCCTCGCAGTTGCTGCAGTAACTCAAGGT +
Preference number: 1 (lower is better)
Translates to: NGWQQLSWDKCQQHL*TLSSALAVAAVTQG
Trigger: ACCTTGAGTTACTGCAGCAACTGCGAGGGCGCTGCTCAGGGTCCACAGATGCTGCTGGCATTTATCCCAGGACAACTGCTGCCACCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 90 bp GTCCGCAGCGGACCCTGTGACCTACTTGGAAGTTTAGGTGGAAGCTaGGAGAGGAGCTCTCCACATGAGACAACACGGGAGACGACAGGA +
Preference number: 1 (lower is better)
Translates to: VRSGPCDLLGSLGGS*ERSSPHETTRETTG
Trigger: TCCTGTCGTCTCCCGTGTTGTCTCATGTGGAGAGCTCCTCTCCCAGCTTCCACCTAAACTTCCAAGTAGGTCACAGGGTCCGCTGCGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR TCA 90 bp CCTACTTGGAAGTTTAGGTGGAAGCTGGGAGAGGAGCTCTCCACATaGGACAACACGGGAGACGACAGGAAGAGCAGACCCTGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: PTWKFRWKLGEELST*DNTGDDRKSRPCWV
Trigger: CACCCAGCAGGGTCTGCTCTTCCTGTCGTCTCCCGTGTTGTCTCATGTGGAGAGCTCCTCTCCCAGCTTCCACCTAAACTTCCAAGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR GCA 90 bp TTTCTTAAAAGTGGAAACGGGTGGCAGCAGTTGTCCTGGGATAAATaGCAGCAGCATCTGTGGACCCTGAGCAGCGCCCTCGCAGTTGCT +
Preference number: 1 (lower is better)
Translates to: FLKSGNGWQQLSWDK*QQHLWTLSSALAVA
Trigger: AGCAACTGCGAGGGCGCTGCTCAGGGTCCACAGATGCTGCTGGCATTTATCCCAGGACAACTGCTGCCACCCGTTTCCACTTTTAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 90 bp TCCAGCAAGTTTCTTAAAAGTGGAAACGGGTGGCAGCAGTTGTCCTaGGATAAATGCCAGCAGCATCTGTGGACCCTGAGCAGCGCCCTC +
Preference number: 1 (lower is better)
Translates to: SSKFLKSGNGWQQLS*DKCQQHLWTLSSAL
Trigger: GAGGGCGCTGCTCAGGGTCCACAGATGCTGCTGGCATTTATCCCAGGACAACTGCTGCCACCCGTTTCCACTTTTAAGAAACTTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR GCA 90 bp TCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTaGCTGACTGACAATTTGGAATTTGGGCCCAATACTAAGATACCG +
Preference number: 1 (lower is better)
Translates to: STRSWRVYAADLTEP*LTDNLEFGPNTKIP
Trigger: CGGTATCTTAGTATTGGGCCCAAATTCCAAATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 90 bp GAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGAAACGGGTaGCAGCAGTTGTCCTGGGATAAATGCCAGCAGCATCTGTGGACC +
Preference number: 1 (lower is better)
Translates to: ERTQKSSKFLKSGNG*QQLSWDKCQQHLWT
Trigger: GGTCCACAGATGCTGCTGGCATTTATCCCAGGACAACTGCTGCCACCCGTTTCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR TCA 90 bp ATGGCTATGAGTGACATGGAATTAGATGAAGAGGCTCAAGTTTGCTaGAGAGAGTTTAAATTTGGCTTTTGCTCTCGGAACGTTAAAATA +
Preference number: 1 (lower is better)
Translates to: MAMSDMELDEEAQVC*REFKFGFCSRNVKI
Trigger: TATTTTAACGTTCCGAGAGCAAAAGCCAAATTTAAACTCTCTTCAGCAAACTTGAGCCTCTTCATCTAATTCCATGTCACTCATAGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGATGCCAGCAGCATCTGTaGACCCTGAGCAGCGCCCTC +
Preference number: 2 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGCQQHL*TLSSAL
Trigger: GAGGGCGCTGCTCAGGGTCCACAGATGCTGCTGGCA...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR GCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGGAGTGGGCTCCTCCCTaGTCAATTCTTCAACACGGA +
Preference number: 2 (lower is better)
Translates to: FGWFKSQQGLSLEETLRREWAPP*SILQHG
Trigger: TCCGTGTTGAAGAATTGAGCAGGGAGGAGCCCACTC...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACACTTGGAAGTTTAGGTaGAAGCTGGGAGAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDTWKFR*KLGEEL
Trigger: GAGCTCCTCTCCCAGCTTCCACCTAAACTTCCAAGT...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR TCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCAGATGAGTGGGACTTaGAAGAGAAGGGGAAGGTGG +
Preference number: 2 (lower is better)
Translates to: APPCSILQHGAGECMLLTQMSGT*KRRGRW
Trigger: CCACCTTCCCCTTCTCTTTCAAGTCCCACTCATCTG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGTTCATCTTTGCTCTTTaGCCCCACAGTGAATCCCTA +
Preference number: 2 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRFIFAL*PHSESL
Trigger: TAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAA...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGATGGCAGCAGTTGTCCTaGGATAAATGCCAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGWQQLS*DKCQQH
Trigger: ATGCTGCTGGCATTTATCCCAGGACAACTGCTGCCA...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGTTGCAATGTAAAAGGTaGTGTGCGTGTTTTGACACG +
Preference number: 2 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRLQCKR*CACFDT
Trigger: CGTGTCAAAACACGCACACCACCTTTTACATTGCAA...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CAA 90 bp CAAAAATCCAGCAAGTTTCTTAAAAGTGGAAACGGGTGGCAGCAGTaGTCCTGGGATAAATGCCAGCAGCATCTGTGGACCCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: QKSSKFLKSGNGWQQ*SWDKCQQHLWTLSS
Trigger: GCTGCTCAGGGTCCACAGATGCTGCTGGCATTTATCCCAGGACAACTGCTGCCACCCGTTTCCACTTTTAAGAAACTTGCTGGATTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR GCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGATGTATCAACTGTGATTaGTGGAATGAACTGGATAAA +
Preference number: 2 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGCINCD*WNELDK
Trigger: TTTATCCAGTTCATTCCAGCAATCACAGTTGATACA...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR GCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACATTGTCCTGGGATAAATaGCAGCAGCATCTGTGGACC +
Preference number: 2 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTLSWDK*QQHLWT
Trigger: GGTCCACAGATGCTGCTGGCATTTATCCCAGGACAA...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAAAAAGTGGAAACGGGTaGCAGCAGTTGTCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTKSGNG*QQLSWD
Trigger: ATCCCAGGACAACTGCTGCCACCCGTTTCCACTTTT...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCAGTTTAGGTGGAAGCTaGGAGAGGAGCTCTCCACAT +
Preference number: 2 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFSLGGS*ERSSPH
Trigger: ATGTGGAGAGCTCCTCTCCCAGCTTCCACCTAAACT...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR TCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCAGTAACTCAAGGTGCTaGAGTGTCTCAGACTCAGCA +
Preference number: 2 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFSNSRC*SVSDSA
Trigger: TGCTGAGTCTGAGACACTTCAGCACCTTGAGTTACT...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCAAAAAGCCTTGCTCTaGGTGAAAGAACACAAAAAT +
Preference number: 2 (lower is better)
Translates to: APPCSILQHGAGECMLLTQKALL*VKEHKN
Trigger: ATTTTTGTGTTCTTTCACCCAGAGCAAGGCTTTTTG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCAAGAGCAGACCCTGCTaGGTGTCTACAATGCTCATT +
Preference number: 2 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFKSRPC*VSTMLI
Trigger: AATGAGCATTGTAGACACCCAGCAGGGTCTGCTCTT...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CAA 90 bp TATTCAGTTGCTCACAAAAGAACGAGCTTGCACTTACGTTCATCTTaGCTCTTTGGCCCCACAGTGAATCCCTACACAGCTTTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: YSVAHKRTSLHLRSS*LFGPTVNPYTAFFC
Trigger: GCAGAAGAAAGCTGTGTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGTTCTTTTGTGAGCAACTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR TCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAATTTTCTTCCTCAGATaGGTGGGACTTGAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTIFFLR*VGLERE
Trigger: TTCTCTTTCAAGTCCCACTCATCTGAGGAAGAAAAT...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR GCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGCACTTCCTATCATGTaGCTTTTGGTTTCCTCAATA +
Preference number: 2 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTALPIM*LLVSSI
Trigger: TATTGAGGAAACCAAAAGGCACATGATAGGAAGTGC...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGATCTTCCTCAGATGAGTaGGACTTGAAAGAGAAGGGG +
Preference number: 2 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGSSSDE*DLKEKG
Trigger: CCCCTTCTCTTTCAAGTCCCACTCATCTGAGGAAGA...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCACTTACCTAACAAAGTaGCAAGACCCTGCAACTATT +
Preference number: 2 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFTYLTK*QDPATI
Trigger: AATAGTTGCAGGGTCTTGCCACTTTGTTAGGTAAGT...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAAGTGACAAACCTTTATaGGATAAGAAACTTACAAGC +
Preference number: 2 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTSDKPL*DKKLTS
Trigger: GCTTGTAAGTTTCTTATCCCATAAAGGTTTGTCACT...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCCTATCATGTGCCTTTTaGTTTCCTCAATATGATCTT +
Preference number: 2 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFLSCAF*FPQYDL
Trigger: AAGATCATATTGAGGAAACCAAAAGGCACATGATAG...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CCA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACATCAACTGTGATTGCTaGAATGAACTGGATAAAAGG +
Preference number: 2 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNINCDC*NELDKR
Trigger: CCTTTTATCCAGTTCATTCCAGCAATCACAGTTGAT...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR GCA 72 bp AGTGGAAACGGGTGGCAGCAGTTGTCCTGGGATAAATaGCAGCAGCATCTGTGGACCCTGAGCAGCGCCCTC +
Preference number: 3 (lower is better)
Translates to: SGNGWQQLSWDK*QQHLWTLSSAL
Trigger: GAGGGCGCTGCTCAGGGTCCACAGATGCTGCTGGCATTTATCCCAGGACAACTGCTGCCACCCGTTTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 72 bp GCCCCTGAGCCTGTGCTCCAGAGAACTAGGTTTGGCTaGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAG +
Preference number: 3 (lower is better)
Translates to: APEPVLQRTRFG*FKSQQGLSLEE
Trigger: CTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAACCTAGTTCTCTGGAGCACAGGCTCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 72 bp CAGCAGTTGTCCTGGGATAAATGCCAGCAGCATCTGTaGACCCTGAGCAGCGCCCTCGCAGTTGCTGCAGTA +
Preference number: 3 (lower is better)
Translates to: QQLSWDKCQQHL*TLSSALAVAAV
Trigger: TACTGCAGCAACTGCGAGGGCGCTGCTCAGGGTCCACAGATGCTGCTGGCATTTATCCCAGGACAACTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR TCA 72 bp ATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTaGCCTACTTGGAAGTTTAGGTGGAAGCTGGGAGAG +
Preference number: 3 (lower is better)
Translates to: MLVVKLGPQRTL*PTWKFRWKLGE
Trigger: CTCTCCCAGCTTCCACCTAAACTTCCAAGTAGGTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 72 bp GGACCCTGTGACCTACTTGGAAGTTTAGGTGGAAGCTaGGAGAGGAGCTCTCCACATGAGACAACACGGGAG +
Preference number: 3 (lower is better)
Translates to: GPCDLLGSLGGS*ERSSPHETTRE
Trigger: CTCCCGTGTTGTCTCATGTGGAGAGCTCCTCTCCCAGCTTCCACCTAAACTTCCAAGTAGGTCACAGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CAA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAAGAGGAGGAAAACCTaGAGGGGGAAACTGTATTAC +
Preference number: 3 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRKRRKT*RGKLYY
Trigger: GTAATACAGTTTCCCCCTCAAGGTTTTCCTCCTCTT...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 72 bp GTGGGCTCCTCCCTGCTCAATTCTTCAACACGGAGCTaGAGAGTGTATGCTGCTGACTTAACAGAACCTTGC +
Preference number: 3 (lower is better)
Translates to: VGSSLLNSSTRS*RVYAADLTEPC
Trigger: GCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 72 bp GATATAACAAGGGATTGCGCATGCTGGTGGTTAAGTTaGGTCCGCAGCGGACCCTGTGACCTACTTGGAAGT +
Preference number: 3 (lower is better)
Translates to: DITRDCACWWLS*VRSGPCDLLGS
Trigger: ACTTCCAAGTAGGTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGTTATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CAA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGGACAAAACTTCACAGTaGCAATGTAAAAGGTGGTGT +
Preference number: 3 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRDKTSQ*QCKRWC
Trigger: ACACCACCTTTTACATTGCAACTGTGAAGTTTTGTC...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 72 bp TTTCTTAAAAGTGGAAACGGGTGGCAGCAGTTGTCCTaGGATAAATGCCAGCAGCATCTGTGGACCCTGAGC +
Preference number: 3 (lower is better)
Translates to: FLKSGNGWQQLS*DKCQQHLWTLS
Trigger: GCTCAGGGTCCACAGATGCTGCTGGCATTTATCCCAGGACAACTGCTGCCACCCGTTTCCACTTTTAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR-3UTR CAA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATGGCCAGTATTTCTTCTaGCTGAAGAGGAGGAAAACC +
Preference number: 3 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNGQYFF*LKRRKT
Trigger: GGTTTTCCTCCTCTTCAGCAAGAAGAAATACTGGCC...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 72 bp AAGAACGAGCTTGCACTTACGTTCATCTTTGCTCTTTaGCCCCACAGTGAATCCCTACACAGCTTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: KNELALTFIFAL*PHSESLHSFLL
Trigger: CAGAAGAAAGCTGTGTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR TCA 72 bp TGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTaGATCCCTACACAGCTTTCTTCTGCCATTTTCTTC +
Preference number: 3 (lower is better)
Translates to: CTYVHLCSLAPQ*IPTQLSSAIFF
Trigger: GAAGAAAATGGCAGAAGAAAGCTGTGTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR GCA 72 bp AGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTaGCTGACTGACAATTTGGAATTTGGGCCCAATACT +
Preference number: 3 (lower is better)
Translates to: SWRVYAADLTEP*LTDNLEFGPNT
Trigger: AGTATTGGGCCCAAATTCCAAATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 72 bp CAAAAATCCAGCAAGTTTCTTAAAAGTGGAAACGGGTaGCAGCAGTTGTCCTGGGATAAATGCCAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: QKSSKFLKSGNG*QQLSWDKCQQH
Trigger: ATGCTGCTGGCATTTATCCCAGGACAACTGCTGCCACCCGTTTCCACTTTTAAGAAACTTGCTGGATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 72 bp TGGTATGTCACCAAGCACTGTATCAACTGTGATTGCTaGAATGAACTGGATAAAAGGAAGGATTCTGTGCCG +
Preference number: 3 (lower is better)
Translates to: WYVTKHCINCDC*NELDKRKDSVP
Trigger: CGGCACAGAATCCTTCCTTTTATCCAGTTCATTCCAGCAATCACAGTTGATACAGTGCTTGGTGACATACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR GCA 72 bp AGGTGGTATGTCACCAAGCACTGTATCAACTGTGATTaGTGGAATGAACTGGATAAAAGGAAGGATTCTGTG +
Preference number: 3 (lower is better)
Translates to: RWYVTKHCINCD*WNELDKRKDSV
Trigger: CACAGAATCCTTCCTTTTATCCAGTTCATTCCAGCAATCACAGTTGATACAGTGCTTGGTGACATACCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CCA 72 bp AGCGATTACCTTACTAGGCTCCAAAAAGCCTTGCTCTaGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTA +
Preference number: 3 (lower is better)
Translates to: SDYLTRLQKALL*VKEHKNPASFL
Trigger: TAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCTTTTTGGAGCCTAGTAAGGTAATCGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR TCA 72 bp AGTGACATGGAATTAGATGAAGAGGCTCAAGTTTGCTaGAGAGAGTTTAAATTTGGCTTTTGCTCTCGGAAC +
Preference number: 3 (lower is better)
Translates to: SDMELDEEAQVC*REFKFGFCSRN
Trigger: GTTCCGAGAGCAAAAGCCAAATTTAAACTCTCTTCAGCAAACTTGAGCCTCTTCATCTAATTCCATGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGGCCGCCTCCCCCTCCTaGGGGGACCCGCATCTCGAA +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRAASPS*GDPHLE
Trigger: TTCGAGATGCGGGTCCCCGCAGGAGGGGGAGGCGGC...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAGGGGCACCGCGGCCATaGCTGGCAGCATCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGGAPRP*LAASWA
Trigger: TGCCCATGATGCTGCCAGGCATGGCCGCGGTGCCCC...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACGAACCGGTCGATGGCTaGCTGGCGCAGGTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDEPVDG*LAQVSP
Trigger: CGGGGAAACCTGCGCCAGGCAGCCATCGACCGGTTC...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGATTCTCCTGCAGTAGCTaGGCAATGGTGGGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGFSCSS*AMVGAR
Trigger: GCGGGCTCCCACCATTGCTCAGCTACTGCAGGAGAA...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGACCTGCCAGGCCAGAGTaGAAGCCGAGAGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGPARPE*KPRVQM
Trigger: CATCTGCACTCTCGGCTTCCACTCTGGCCTGGCAGG...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAGACCACCTCAGGATTaGAGGTGGCCAGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRRPPQD*RWPASL
Trigger: CAGACTGGCTGGCCACCTGCAATCCTGAGGTGGTCT...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACGTGGTCCAGCAGTCTTaGTCACCACCTCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDVVQQS*SPPPAF
Trigger: GAAGGCTGGAGGTGGTGAGCAAGACTGCTGGACCAC...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAGGTCGTGCAGGTGGTTaGCATGGGTGTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGGRAGG*HGCVEE
Trigger: CTCCTCAACACACCCATGGCAACCACCTGCACGACC...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGATCTCCTTGGGCTCCTTaGCTCTCTTCGGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGSPWAP*LSSAPW
Trigger: CCAAGGAGCCGAAGAGAGCCAAGGAGCCCAAGGAGA...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACTTCCTTTCCTCCCTCTaGGGACTGGGGCAGACAAGC +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDFLSSL*GLGQTS
Trigger: GCTTGTCTGCCCCAGTCCCCAGAGGGAGGAAAGGAA...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGACCTCTCGGTGGCCTATaGTTTCAGGTCTCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGPLGGL*FQVSVL
Trigger: CAGGACGGAGACCTGAAACCATAGGCCACCGAGAGG...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACCTGGGAAAGGAGATGTaGCTCCTGGAGACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDLGKEM*LLETPL
Trigger: CAGAGGGGTCTCCAGGAGCCACATCTCCTTTCCCAG...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACCACTTGAATCGCCCGTaGGTCAGGATGTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDHLNRP*VRMSFH
Trigger: GTGGAAGGACATCCTGACTCACGGGCGATTCAAGTG...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACTTCCTCCCCTGTTTCTaGATCCTTGGTGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDFLPCF*ILGVGH
Trigger: GTGGCCCACACCAAGGATGCAGAAACAGGGGAGGAA...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACTACTGCTGGATCATCTaGCTGCTGATCTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDYCWII*LLIWLP
Trigger: CGGCAGCCAGATCAGCAGGCAGATGATCCAGCAGTA...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGGCTCCCCAGGCCATGTaGCCACCTTTCGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRAPQAM*PPFDVF
Trigger: AAACACATCGAAAGGTGGGCACATGGCCTGGGGAGC...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACCTTCTGGATCTGGGCTaGCAGTGCTGCACCATTGCT +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDLLDLG*QCCTIA
Trigger: AGCAATGGTGCAGCACTGGCAGCCCAGATCCAGAAG...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCGGTCGATGGCTGCCTaGCGCAGGTTTCCCCGTACT +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTRSMAA*RRFPRT
Trigger: AGTACGGGGAAACCTGCGCCAGGCAGCCATCGACCG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGACCTCAGGATTGCAGGTaGCCAGCCAGTCTGCATTCT +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGPQDCR*PASLHS
Trigger: AGAATGCAGACTGGCTGGCCACCTGCAATCCTGAGG...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGATACAGTGGCACTGATTaGCTGGGGGAGGAAAGACCC +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGYSGTD*LGEERP
Trigger: GGGTCTTTCCTCCCCCAGCCAATCAGTGCCACTGTA...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAACAGCTTTCTCAGCCTaGCTGCTGGCTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGTAFSA*LLAAAV
Trigger: AACAGCAGCAGCCAGCAGCCAGGCTGAGAAAGCTGT...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCACCGCGGCCATGCCTaGCAGCATCATGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTHRGHA*QHHGQH
Trigger: ATGCTGCCCATGATGCTGCCAGGCATGGCCGCGGTG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGAGTCTGGCCTGCTGCATaGCTGGCAGAGCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGVWPAA*LAEPCP
Trigger: TGGGCATGGCTCTGCCAGCCATGCAGCAGGCCAGAC...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGACACGTGTTCTCTCTCTaGGGACACAGTGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGHVFSL*GHSGTG
Trigger: TCCAGTGCCACTGTGTCCCCAGAGAGAGAACACGTG...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCCATCTGCGAGAAGATaGGCACTTTGTGGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTPSARR*ALCGPR
Trigger: CCGGGGGCCACAAAGTGCTCATCTTCTCGCAGATGG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGATGTGGGCAGTGCACCTaGGGGCTCATACTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGCGQCT*GLILVA
Trigger: AGCCACCAGTATGAGCCCTCAGGTGCACTGCCCACA...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCCTCATTGGAGTCTTTaGGCCCCTCCTCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTPHWSL*APPPWP
Trigger: AGGCCAGGGAGGAGGGGCTCAAAGACTCCAATGAGG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGTTTCTGCGCTTTACTTaGCGTCCTGAGCGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRFLRFT*RPERRF
Trigger: GAAACGGCGCTCAGGACGGCAAGTAAAGCGCAGAAA...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACGGAGGCTCCTCAGCCTaGCAGGCCAGAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYGGSSA*QARVEA
Trigger: GGCTTCCACTCTGGCCTGGCAGGCTGAGGAGCCTCC...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACCTTCTAGCTCCCAGGTaGTTTCCTCATATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDLLAPR*FPHMAG
Trigger: CCCTGCCATATGAGGAAAGCACCTGGGAGCTAGAAG...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGGTTTGCATCATCTTCTaGAGGCTCCTCAGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRVCIIF*RLLSLP
Trigger: TGGCAGGCTGAGGAGCCTCCAGAAGATGATGCAAAC...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAGGAATGCGATGGACTaGATGGTTTTCCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRRNAMD*MVFPRP
Trigger: GGGCCTAGGGAAAACCATCCAGTCCATCGCATTCCT...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATGGGTCGGAGCCATCCTaGGCTGCCTGGCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNGSEPS*AAWLSS
Trigger: GGATGACAGCCAGGCAGCCCAGGATGGCTCCGACCC...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTGGAGGTTCTCCTGGGTaGACCTCCTGGACAGTCTTG +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTGGSPG*TSWTVL
Trigger: CAAGACTGTCCAGGAGGTTCACCCAGGAGAACCTCC...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGATGTGTTCCAGGGCCATaGGCTTTAACCCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGCVPGP*ALTLPE
Trigger: TTCTGGAAGGGTTAAAGCTCATGGCCCTGGAACACA...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGACTCTGAGAACTCCATaGGCTCGTCCTCCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRTLRTP*ARPPQK
Trigger: CTTTTGAGGAGGACGAGCTCATGGAGTTCTCAGAGT...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGTCAGGCAGGCAGAGATaGTCATCCCTGCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRSGRQR*SSLLSI
Trigger: AATGGAAAGCAGGGATGATCATCTCTGCCTGCCTGA...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTGCCTGGATCATGGCCTaGAGCTGGAAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTAWIMA*SWKSEA
Trigger: AGCCTCTGACTTCCAGCTGCAGGCCATGATCCAGGC...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGACTGGCTCTGAGAGGCTaGTTCGAGAACCTGCACTGC +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGLALRG*FENLHC
Trigger: GCAGTGCAGGTTCTCGAAGCAGCCTCTCAGAGCCAG...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGATAGCTGACTCCCCATaGCAGCCATTGAGGACAATG +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRIADSP*QPLRTM
Trigger: CATTGTCCTCAATGGCTGGCATGGGGAGTCAGCTAT...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACCTTCCGTTGACAATCTaGCCAGTCACTGGGTGGATT +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDLPLTI*PVTGWI
Trigger: AATCCACCCAGTGACTGGGCAGATTGTCAACGGAAG...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAAGCTTCCCGGCCGCCTaGATCATGGCCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTSFPAA*IMACSW
Trigger: CCAGCTGCAGGCCATGATCCAGGCGGCCGGGAAGCT...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAAGAGTTGTAGTGCTTaGTCTGCTTCCTCACACGCG +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRKSCSA*SASSHA
Trigger: CGCGTGTGAGGAAGCAGACCAAGCACTACAACTCTT...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAGGTTCTTTGCAGCGTaGTCTCCTCTGCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRRFFAA*SPLLGF
Trigger: AAACCCAAGCAGAGGAGACCACGCTGCAAAGAACCT...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAGGCCGTGGATTCCTCTaGCAAAGATTTCTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGGRGFL*QRFLKG
Trigger: TCCTTTCAGAAATCTTTGTCAGAGGAATCCACGGCC...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGACACCAGCAGAGCCCTaGAAATCATCTCCATATCCT +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRTPAEP*KSSPYP
Trigger: AGGATATGGAGATGATTTGCAGGGCTCTGCTGGTGT...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAACCATCATCTTTCCATaGGGGGAGACGACACACATT +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGTIIFP*GETTHI
Trigger: AATGTGTGTCGTCTCCCCGCATGGAAAGATGATGGT...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGAGCTCATACTGGTGGCTaGAGGGCCACTTCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGAHTGG*RATSPL
Trigger: TAAAGGGGAAGTGGCCCTGCAGCCACCAGTATGAGC...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAAGCCTGGCTGCTGGCTaGTGCTGTTGGCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTSLAAG*CCWLRS
Trigger: GCTCCTGAGCCAACAGCAGCAGCCAGCAGCCAGGCT...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATGAGTGTCTGGCCTGCTaGATGGCTGGCAGAGCCATG +
Preference number: 4 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNECLAC*MAGRAM
Trigger: CATGGCTCTGCCAGCCATGCAGCAGGCCAGACACTC...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACTCTGAGTGTCTGGCCTaGTGCATGGCTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYSECLA*CMAGRA
Trigger: GGCTCTGCCAGCCATGCAGCAGGCCAGACACTCAGA...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGACTGTTTCTGCATCCTTaGTGTGGGCCACTTCTAAGA +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGLFLHP*CGPLLR
Trigger: TCTTAGAAGTGGCCCACACCAAGGATGCAGAAACAG...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGGCGTCTGGACCGTGTaGGCCTTTCGTCTGAGTCGC +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTGVWTV*AFRLSR
Trigger: GCGACTCAGACGAAAGGCCCACACGGTCCAGACGCC...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACAAAGAATGCGGCTCTTaGCTGAGTCCTGTCTTACCA +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDKECGS*LSPVLP
Trigger: TGGTAAGACAGGACTCAGCCAAGAGCCGCATTCTTT...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATGGCCCCAGCCAAAGATaGGCAGGTTCTTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNGPSQR*AGSSPL
Trigger: GAGTGGAGAAGAACCTGCTCATCTTTGGCTGGGGCC...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACAAGGGGGTTTCCCTGTaGATCTCTGTATACCATTTC +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDKGVSL*ISVYHF
Trigger: GAAATGGTATACAGAGATGCACAGGGAAACCCCCTT...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAGTGTGGGTTCTTCTCTaGAGGATCTGGTCTATATCT +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGVWVLL*RIWSIS
Trigger: AGATATAGACCAGATCCTGCAGAGAAGAACCCACAC...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTGTCTGCATAGCTCCTTaGGGTTGCAGCGCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTVCIAP*GCSAGK
Trigger: TTTACCAGCGCTGCAACCGCAAGGAGCTATGCAGAC...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAAGCCCGCACTTCCTGTaGCTCTTCCCCAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTSPHFL*LFPKVS
Trigger: GGAGACCTTGGGGAAGAGGCACAGGAAGTGCGGGCT...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACACTCCTCCCTGGCCTGTaGCACGTGTTCTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTLLPGL*HVFSLW
Trigger: CCAGAGAGAGAACACGTGGCACAGGCCAGGGAGGAG...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTAGGGCTCTGCAGAGATaGGTTTGGAAGACTGTGGTC +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTRALQR*VWKTVV
Trigger: GACCACAGTCTTCCAAACCCATCTCTGCAGAGCCCT...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCCATCCTGGGCTGCCTaGCTGTCATCCTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTPSWAA*LSSFFS
Trigger: TGAAAAGAAGGATGACAGCCAGGCAGCCCAGGATGG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGCTGGCTGATAAGCCTTaGGTTTCTCTACTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRLADKP*VSLLQS
Trigger: ACTCTGAAGTAGAGAAACCCAAGGCTTATCAGCCAG...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCCATGTCTTCTGGTTTaGGCTCACTTCCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTPCLLV*AHFPQE
Trigger: CTCCTGAGGGAAGTGAGCCCAAACCAGAAGACATGG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACGTAGCTGAGCAATGGTaGGAGCCCGCACTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYVAEQW*EPALPV
Trigger: CACAGGAAGTGCGGGCTCCCACCATTGCTCAGCTAC...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTAAGAAGCTCTCCTTCTaGATCTGGGCTGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTKKLSF*IWAASA
Trigger: AGCACTGGCAGCCCAGATCCAGAAGGAGAGCTTCTT...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAGTGGTCTCCTCTGCTTaGGTTTGTCTGAAAAACTTG +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGVVSSA*VCLKNL
Trigger: CAAGTTTTTCAGACAAACCCAAGCAGAGGAGACCAC...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACTGCCTGGCAGCATCATaGGCAGCATGCTCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYCLAAS*AACSGC
Trigger: ACACCCTGAGCATGCTGCCCATGATGCTGCCAGGCA...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACGGAAACTGGCCAGGGTaGTTTGTCTGGGTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHGNWPG*FVWVGA
Trigger: GGCTCCGACCCAGACAAATCACCCTGGCCAGTTTCC...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACCATGAGAGAGGAAGCTaGAGTAATTTCTGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDHERGS*SNFCLN
Trigger: ATTGAGGCAGAAATTACTTCAGCTTCCTCTCTCATG...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATTGTTGCTTCTGGCTCTaGGAGGCTGCTTCGAGAACC +
Preference number: 4 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNCCFWL*EAASRT
Trigger: GGTTCTCGAAGCAGCCTCTCAGAGCCAGAAGCAACA...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACGAATGCTTTATCAGCTaGTTCTCCCAGTATTTCAGC +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDECFIS*FSQYFS
Trigger: GCTGAAATACTGGGAGAAGCAGCTGATAAAGCATTC...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGGAGCCATCCTGGGCTaGCTGGCTGTCATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTGAILG*LAVILL
Trigger: AAGAAGGATGACAGCCAGGCAGCCCAGGATGGCTCC...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACTGGAATTATTGGCTTTaGTTCTGTACAGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDWNYWL*FCTGLA
Trigger: AGCCAGACCTGTACAGAAGCAAAGCCAATAATTCCA...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCAGGGTAGTCTGCCCTaGATCTTCATGGACTTCCAA +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTQGSLP*IFMDFQ
Trigger: TTGGAAGTCCATGAAGATGCAGGGCAGACTACCCTG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACACCTGAGCGCCGTTTCTaGCTGTCTGCAGACTCACTG +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTPERRF*LSADSL
Trigger: CAGTGAGTCTGCAGACAGCCAGAAACGGCGCTCAGG...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACCCAGGCCTCCCGCTCTaGTGCACAGAAGAAAGACAA +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYPGLPL*CTEERQ
Trigger: TTGTCTTTCTTCTGTGCACCAGAGCGGGAGGCCTGG...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACACACTCCCACCAGACTaGGAGGTAGAGGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHTLPPD*EVEAGP
Trigger: AGGCCCAGCCTCTACCTCCCAGTCTGGTGGGAGTGT...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTCAATACCAGGAGGCTaGCAGCTCTCATTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTSIPGG*QLSFLL
Trigger: CAGCAGAAATGAGAGCTGCCAGCCTCCTGGTATTGA...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGACCACTGTGGAATTATTaGCTTTGCTTCTGTACAGGT +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGPLWNY*LCFCTG
Trigger: ACCTGTACAGAAGCAAAGCCAATAATTCCACAGTGG...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCAAGTAGGCTCTTGCTaGGAACAGCTTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTQVGSC*EQLSQP
Trigger: AGGCTGAGAAAGCTGTTCCCAGCAAGAGCCTACTTG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTGGCAAAACCAGCTaGGAAGCCCACCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFGGKTS*EAHQPS
Trigger: ACTGGGCTGGTGGGCTTCCCAGCTGGTTTTGCCACC...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACGGCCTGCTGCATGGCTaGCAGAGCCATGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNGLLHG*QSHAHA
Trigger: GGCATGGGCATGGCTCTGCCAGCCATGCAGCAGGCC...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGATTGGGCATGTTGTGTTaGTTTGCACCTTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGLGMLC*FAPLVR
Trigger: CCTGACCAAAGGTGCAAATCAACACAACATGCCCAA...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCTGAACACTTCCTCCTaGACCCAGTATCCTTGGTTA +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTLNTSS*TQYPWL
Trigger: TAACCAAGGATACTGGGTTCAGGAGGAAGTGTTCAG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATGTTTGGCGGTGCCAATaGGCAGGTCTCGATCATGTT +
Preference number: 4 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNVWRCQ*AGLDHV
Trigger: AACATGATCGAGACCTGCTCATTGGCACCGCCAAAC...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTACTTTCAAGAGACTCTaGAGTCCTACTCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTTFKRL*SPTHWG
Trigger: ACCCCAGTGAGTAGGACTTCAGAGTCTCTTGAAAGT...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGAATACCGAGAGCTCCTTaGAGTGAACTGATAGCACCA +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGIPRAP*SELIAP
Trigger: TGGTGCTATCAGTTCACTTCAAGGAGCTCTCGGTAT...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTATTGTGGGTTCTGACTaGTCAGAAAACGGACTAGGG +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTIVGSD*SENGLG
Trigger: CCCTAGTCCGTTTTCTGATCAGTCAGAACCCACAAT...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACACTGGGGTTGGTCCTTaGTCCCTGCTGGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHTGVGP*SLLAFL
Trigger: CAAGAAGGCCAGCAGGGAGCAAGGACCAACCCCAGT...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGCTTCTCAATTATGTTTaGATCATCTTCTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRLLNYV*IIFWRL
Trigger: GAGCCTCCAGAAGATGATGCAAACATAATTGAGAAG...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGAAGGAGTTCCCTCGAATaGTTTATCAGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGRSSLE*FISCFS
Trigger: GGAGAAGCAGCTGATAAAGCATTCGAGGGAACTCCT...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACCTTCTTTATCTATGTTaGCTCTTTCAGGAATGTCCG +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDLLYLC*LFQECP
Trigger: CGGACATTCCTGAAAGAGGCAACATAGATAAAGAAG...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGAAGTCAAGTAGGCTCTTaGTGGGAACAGCTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGSQVGS*WEQLSQ
Trigger: CTGAGAAAGCTGTTCCCAGCAAGAGCCTACTTGACT...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCTGTCTGCAGACTCACTaGGCTCCTCAGGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFCLQTH*APQGSA
Trigger: TGCAGAGCCCTGAGGAGCCCAGTGAGTCTGCAGACA...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTCTGCATCCTTGGTGTaGGCCACTTCTAAGATACGA +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTSASLV*ATSKIR
Trigger: TCGTATCTTAGAAGTGGCCCACACCAAGGATGCAGA...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGAAGTGATGGTGGAAAGTaGGGCAATGATGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGSDGGK*GNDEKG
Trigger: CCCTTTCTCATCATTGCCCCACTTTCCACCATCACT...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACGCAGTAGCTGAGCAATaGTGGGAGCCCGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHAVAEQ*WEPALP
Trigger: AGGAAGTGCGGGCTCCCACCATTGCTCAGCTACTGC...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACATGGATAACACTGGTGTaGGCAGTGCACCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTWITLV*AVHLRA
Trigger: AGCCCTCAGGTGCACTGCCCACACCAGTGTTATCCA...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACGAGAACCTGCACTGCTaGATAACACTGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYENLHC*ITLVWA
Trigger: TGCCCACACCAGTGTTATCCAGCAGTGCAGGTTCTC...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTGAGAGTCCGCTACAATaGCTGGAGCTTTTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTESPLQ*LELLGV
Trigger: AACTCCTAAAAGCTCCAGCCATTGTAGCGGACTCTC...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCGAGACGCTGAAGCAGTaGTCGTGCAGGTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFETLKQ*SCRWLP
Trigger: TGGCAACCACCTGCACGACCACTGCTTCAGCGTCTC...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACATGGTTCTGGAGGGTCTaGACTTGCCCGTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTWFWRV*TCPSLE
Trigger: TTCCAAAGACGGGCAAGTTCAGACCCTCCAGAACCA...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGATGGGGCAGACAAGCCTaGGTGGTTCTGGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGWGRQA*VVLEGL
Trigger: CAGACCCTCCAGAACCACTCAGGCTTGTCTGCCCCA...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACATGTTTACAGTGGCACTaGTTGGCTGGGGGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTCLQWH*LAGGGK
Trigger: CTTTCCTCCCCCAGCCAATCAGTGCCACTGTAAACA...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACAGCCCACCAGCCCAGTaGGAGGAATGCCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHSPPAQ*EECLEY
Trigger: ATATTCCAGGCATTCCTCTCACTGGGCTGGTGGGCT...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAACATGGAAGGGTAGATaGGTCCAGGAGACACTCCTG +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTTWKGR*VQETLL
Trigger: CAGGAGTGTCTCCTGGACTCATCTACCCTTCCATGT...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGACCGAGAGTGCAGATGTaGGGCCAGCTCCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: SLALGERTQKSSKFLKSGPRVQM*GQLPGQ
Trigger: CTGTCCTGGGAGCTGGCCGCACATCTGCACTCTCGG...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATGTCTCTGAAGGGAACTaGGAGGGCTCCAGAAAGTTA +
Preference number: 4 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNVSEGN*EGSRKL
Trigger: TAACTTTCTGGAGCCCTCGCAGTTCCCTTCAGAGAC...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACGAGGCTTCGGAGCTGTaGGCTTTTCTGAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYEASEL*AFLKSS
Trigger: GGAAGATTTCAGAAAAGCGCACAGCTCCGAAGCCTC...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGATCCATTTTTGAGAGCTaGTGTACTCCATTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGSIFES*CTPLVL
Trigger: CAGCACCAATGGAGTACAGCAGCTCTCAAAAATGGA...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTGGATTAGACCAGCTTaGAGAATTCCAGACAAGTCC +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTWIRPA*RIPDKS
Trigger: GGACTTGTCTGGAATTCTGCAAGCTGGTCTAATCCA...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGTGCTCAGGGTAGTCTaGCCTGCATCTTCATGGACT +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTVLRVV*PASSWT
Trigger: AGTCCATGAAGATGCAGGGCAGACTACCCTGAGCAC...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTGGGGCAGACAATGATTaGCAGCTTCTTCAATGTTCT +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTGADND*QLLQCS
Trigger: AGAACATTGAAGAAGCTGCCAATCATTGTCTGCCCC...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCTCTCTTTACCTTCCTTaGTACCGGAGGCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFSLYLP*YRRPPG
Trigger: ACCGGGAGGCCTCCGGTACCAAGGAAGGTAAAGAGA...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACGTCCTTGCTCCCTGCTaGCCTTCTTGGACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHVLAPC*PSWTLS
Trigger: GGACAAAGTCCAAGAAGGCCAGCAGGGAGCAAGGAC...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAAAAATGTGCTTCATCTaGGCCTGTTTGTTCCTAAAT +
Preference number: 4 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGKMCFI*ACLFLN
Trigger: ATTTAGGAACAAACAGGCCCAGATGAAGCACATTTT...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCCTGGGTCAGCCCGCATaGCATTGTACCTCTCATACC +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFLGQPA*HCTSHT
Trigger: GGTATGAGAGGTACAATGCCATGCGGGCTGACCCAG...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACATGCTTCAGTTTAAATaGCTCTGTTGGAATAACAGC +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDMLQFK*LCWNNS
Trigger: GCTGTTATTCCAACAGAGCCATTTAAACTGAAGCAT...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACCCTGAGGGCTCATACTaGTGGCTGCAGGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNPEGSY*WLQGHF
Trigger: GAAGTGGCCCTGCAGCCACCAGTATGAGCCCTCAGG...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACCTTCATCAGGCTCAGTaGAAATGTGCTTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYLHQAQ*KCASSG
Trigger: CCCAGATGAAGCACATTTTCACTGAGCCTGATGAAG...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATTGTCCAAACGAGAAATaGTGCGGAACTGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNCPNEK*CGTVSS
Trigger: ACTGGACACAGTTCCGCATCATTTCTCGTTTGGACA...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACACTCCAGGCTCTCATCTaGCTTCTTGTCCAAACGAGA +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTLQALI*LLVQTR
Trigger: TCTCGTTTGGACAAGAAGTCAGATGAGAGCCTGGAG...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACCCGTTTCTGGCTGTCTaGAGACTCACTGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNPFLAV*RLTGLL
Trigger: GAGGAGCCCAGTGAGTCTGCAGACAGCCAGAAACGG...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGACTGGACAGTCTTGGATaGCAGGATCTTCTCAATTAT +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGLDSLG*QDLLNY
Trigger: ATAATTGAGAAGATCCTGGCATCCAAGACTGTCCAG...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACATCTTCCACAGAGTTCTaGAAGGGTGTTCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTSSTEF*KGVPVS
Trigger: GCTCACAGGAACACCCTTGCAGAACTCTGTGGAAGA...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGATCAATGATGGTCTCTTaGTTAGGAGCAAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGSMMVS*LGARFF
Trigger: GAAGAACCTTGCTCCTAAGCAAGAGACCATCATTGA...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCATGTTGTGTTGATTTaGACCTTTGGTCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTHVVLI*TFGQEG
Trigger: TCCTTCCTGACCAAAGGTGCAAATCAACACAACATG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATCAGCGTGGTCTCCTCTaGTTGGGTTTGTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNQRGLL*LGLSEK
Trigger: TTTTTCAGACAAACCCAAGCAGAGGAGACCACGCTG...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACATTTTCCAGGTTCTTTaGAGCGTGGTCTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYIFQVL*SVVSSA
Trigger: AGCAGAGGAGACCACGCTGCAAAGAACCTGGAAAAT...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATAGAGGCATCCGACATTaGGGAGTGATTCAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNRGIRH*GVIQSS
Trigger: AGAGCTTTGAATCACTCCCCAATGTCGGATGCCTCT...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCGAATGGAGGTTCTCCTaGGTGAACCTCCTGGACAGT +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFEWRFS*VNLLDS
Trigger: ACTGTCCAGGAGGTTCACCCAGGAGAACCTCCATTC...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGAAATTTTCTTCAGCTCTaGGCAATCTGCCAGGATCAT +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGNFLQL*AICQDH
Trigger: ATGATCCTGGCAGATTGCCCAGAGCTGAAGAAAATT...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGATGCATTCTTCAGTTCTaGGAGCAAGAGCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGCILQF*EQELVF
Trigger: AAAAACCAGCTCTTGCTCCCAGAACTGAAGAATGCA...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACACACATTCCGACACATaGCTACAAAGCTATAAAAAT +
Preference number: 4 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDTHSDT*LQSYKN
Trigger: ATTTTTATAGCTTTGTAGCCATGTGTCGGAATGTGT...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGACCCTTTAACACCACATaGCAAATATTATCTAGGCGG +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGPFNTT*QILSRR
Trigger: CCGCCTAGATAATATTTGCCATGTGGTGTTAAAGGG...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACGGTGCTGGCACTCACTaGGAAAGGAGATGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNGAGTH*ERRCGS
Trigger: GGAGCCACATCTCCTTTCCCAGTGAGTGCCAGCACC...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACTGCCCAGTCACTGGGTaGATTAGACCAGCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHCPVTG*IRPACR
Trigger: TCTGCAAGCTGGTCTAATCCACCCAGTGACTGGGCA...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACCCCATTCATGAACAGTaGTCCCATTCCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYPIHEQ*SHSRRR
Trigger: TCTCCTTCTGGAATGGGACCACTGTTCATGAATGGG...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CAA 72 bp GTTAACATACAGGTTCGGTTAAGATATAACAAGGGATaGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: VNIQVRLRYNKG*RMLVVKLGPQR
Trigger: CCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGTTATATCTTAACCGAACCTGTATGTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATATCTGTTCTGTTTCCTaGAGCCACGAAACTAGCCTT +
Preference number: 4 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNICSVS*SHETSL
Trigger: AAGGCTAGTTTCGTGGCTTCAGGAAACAGAACAGAT...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGAAATAGTCAGTGCGGTTaGGCCCATGTTTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGNSQCG*AHVWRC
Trigger: GCACCGCCAAACATGGGCTCAACCGCACTGACTATT...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCGCTGGGGGTCATTCATaGTGTAATAGTCAGTGCGGT +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFAGGHS*CNSQCG
Trigger: ACCGCACTGACTATTACATCATGAATGACCCCCAGC...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTGGATCCATAATCAGTaGAGCTTCTCTTCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTWIHNQ*SFSSLY
Trigger: GTAAAGAGAAGAGAAGCTGCACTGATTATGGATCCA...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCTCGCTTGATCTTCTGTaGGATGCGGGGATCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFSLDLL*DAGILF
Trigger: GAAAAGGATCCCCGCATCGCACAGAAGATCAAGCGA...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCCCATCTGTAACTCCCTaGTCTGCAGAAAGGGACTTC +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFPSVTP*SAERDF
Trigger: GAAGTCCCTTTCTGCAGAGCAGGGAGTTACAGATGG...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGACTGAAGCAGTGGTCGTaGAGGTGGTTGCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: SLALGERTQKSSKFLKSGLKQWS*RWLPWV
Trigger: CACCCATGGCAACCACCTGCACGACCACTGCTTCAG...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTCCTCCATCCCATTATaGGATGTCAATTTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTSSIPL*DVNFLE
Trigger: TTCTAGGAAATTGACATCCCATAATGGGATGGAGGA...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGACTAAACTCTCCACGGTaGTTTCGTTTTTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGLNSPR*FRFSFF
Trigger: GAAAAAGGAAAAACGAAACCACCGTGGAGAGTTTAG...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACCTGAAAGGAATGCGATaGACTGGATGGTTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYLKGMR*TGWFSL
Trigger: TAGGGAAAACCATCCAGTCCATCGCATTCCTTTCAG...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACGTTGTGATGACGACGTaGAACTTGAAGACTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYVVMTT*NLKTPE
Trigger: TTCAGGAGTCTTCAAGTTCCACGTCGTCATCACAAC...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGACTATTCTTCAGTCTGTaGGCCTCATCAATTATCACA +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGLFFSL*ASSIIT
Trigger: TGTGATAATTGATGAGGCCCACAGACTGAAGAATAG...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACTGGATGGTGATGGTGTaGGTTCTTCTCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHWMVMV*VLLCRI
Trigger: GATCCTGCAGAGAAGAACCCACACCATCACCATCCA...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGTTCAACATAGATGCTaGCATCAGGGGGACCATCAT +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTVQHRC*HQGDHH
Trigger: ATGATGGTCCCCCTGATGCCAGCATCTATGTTGAAC...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTAGCAAGTTTTCATCATaGTCAAGAGAAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTSKFSS*SREMTS
Trigger: GGAGGTCATTTCTCTTGACCATGATGAAAACTTGCT...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACGAGGTTCTTCCCCCTTaGGATGTTTACAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHEVLPP*DVYSGL
Trigger: AAGCCCACTGTAAACATCCCAAGGGGGAAGAACCTC...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCTGCCCTGCATCTTCATaGACTTCCAAGATTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFCPASS*TSKIPA
Trigger: GGCTGGAATCTTGGAAGTCCATGAAGATGCAGGGCA...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGACCATCTCTGAGTGTCTaGCCTGCTGCATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLALGERTQKSSKFLKSGPSLSV*PAAWLA
Trigger: TGCCAGCCATGCAGCAGGCCAGACACTCAGAGATGG...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATTTCTTTTTCCTCTTCTaGGTCTCAAGACCGACCATC +
Preference number: 4 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNFFFLF*VSRPTI
Trigger: GATGGTCGGTCTTGAGACCCAGAAGAGGAAAAAGAA...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGAGAACTTGAAGACTCCTaGAAGGGGGTTTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGELEDS*KGVSLC
Trigger: GCACAGGGAAACCCCCTTTCAGGAGTCTTCAAGTTC...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCTTTCGGTTGATGTCCTaGAGAATAGCCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFFRLMS*RIALSR
Trigger: CCTGGACAAGGCTATTCTTCAGGACATCAACCGAAA...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTAGAGAAATGACCTCCTaGACTTTGGAAACAAAGTTT +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTREMTS*TLETKF
Trigger: AAACTTTGTTTCCAAAGTTCAGGAGGTCATTTCTCT...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACACTCCACCTAGAGAGCTaGTGTCTAATTTTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTLHLES*CLIFQV
Trigger: AACCTGGAAAATTAGACATCAGCTCTCTAGGTGGAG...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACAGTTATTGTGGGTTCTaGCTGATCAGAAAACGGACT +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYSYCGF*LIRKRT
Trigger: AGTCCGTTTTCTGATCAGTCAGAACCCACAATAACT...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACACCTCATTGTATTTTCTaGGCTTTACTTGCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTPHCIF*ALLAVL
Trigger: CAGGACGGCAAGTAAAGCGCAGAAAATACAATGAGG...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACGATGTCTCCAGTTTCTaGCACGCATCAGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNDVSSF*HASEAG
Trigger: ACCTGCCTCTGATGCGTGGCAGAAACTGGAGACATC...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGAGGCCTCCCGCTCTGGTaGACAGAAGAAAGACAAAGC +
Preference number: 4 (lower is better)
Translates to: SLALGERTQKSSKFLKSGGLPLW*TEERQS
Trigger: GCTTTGTCTTTCTTCTGTGCACCAGAGCGGGAGGCC...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGATCAAAGCTCTTAACTTaGACAACTGCTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGSKLLT*TTASLS
Trigger: AGAAAGAGAAGCAGTTGTCCAAGTTAAGAGCTTTGA...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCTGTTTACAGTGGGCTTaGGGAAATCCAAGACCTCTG +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFCLQWA*GNPRPL
Trigger: CAGAGGTCTTGGATTTCCCCAAGCCCACTGTAAACA...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAAAAATCCATGTCTTCTaGTTTGGGCTCACTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTKIHVF*FGLTSL
Trigger: GAGGGAAGTGAGCCCAAACCAGAAGACATGGATTTT...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACCTCAGAGTATTTGCCTaGGTAGTCTTGACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHLRVFA*VVLTEA
Trigger: TGCCTCAGTCAAGACTACCCAGGCAAATACTCTGAG...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCGTTCTGATCACTGCCTaGCTCCTTTTCACACACAGA +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFVLITA*LLFTHR
Trigger: TCTGTGTGTGAAAAGGAGCCAGGCAGTGATCAGAAC...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACATCTGACAAAGATTTCTaGAAGGAATGCGATGGACTG +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTSDKDF*KECDGL
Trigger: CAGTCCATCGCATTCCTTTCAGAAATCTTTGTCAGA...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACAGCTGTGCGCTTTTCTaGAATCTTCCAGAATCTTTT +
Preference number: 4 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYSCALF*NLPESF
Trigger: AAAAGATTCTGGAAGATTTCAGAAAAGCGCACAGCT...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACATGTATCTCCTCTGGATaGGATAATCTTCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTCISSG*DNLPGC
Trigger: ACATCCTGGAAGATTATCTCATCCAGAGGAGATACA...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCTTAACTTGGACAACTaGTTCTCTTTCTTCTGTATT +
Preference number: 4 (lower is better)
Translates to: APPCSILQHGAGECMLLTLNLDN*FSFFCI
Trigger: AATACAGAAGAAAGAGAAGCAGTTGTCCAAGTTAAG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGATTGACACCGTCTTTCTaGTTTGTCTCCTTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGLTPSF*FVSLGS
Trigger: GGAGCCCAAGGAGACAAAGCAGAAAGACGGTGTCAA...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCCCTTCTGGGTTCTTTTaGCTCTTTAGGTTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFPSGFF*LFRFSL
Trigger: AAGCGAGAACCTAAAGAGCCAAAAGAACCCAGAAGG...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCTTGGGATGTTTACAGTaGGCTTGGGGAAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFLGCLQ*AWGNPR
Trigger: TCTTGGATTTCCCCAAGCCCACTGTAAACATCCCAA...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCTTCTGTTGTACCAGTTaGAAAGAAGCCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFFCCTS*KEASSS
Trigger: GGATGAACTGGCTTCTTTTCAACTGGTACAACAGAA...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACATCACACAGCTCCAGTaGATTTTCTTCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNITQLQ*IFFSSG
Trigger: CCCAGAGCTGAAGAAAATTCACTGGAGCTGTGTGAT...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGACTGCTTGGGTTTGTCTaGAAAACTTGTCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGLLGFV*KTCPKA
Trigger: GGCTTTGGGACAAGTTTTTCAGACAAACCCAAGCAG...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGAGGCTCAGCTAGGGTGTaGTTGAATTTGCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLALGERTQKSSKFLKSGGSARV*LNLLSG
Trigger: CCCAGAAAGCAAATTCAATCACACCCTAGCTGAGCC...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGACAATCAGCCCATTCATaGACAGTGGTCCCATTCCAG +
Preference number: 4 (lower is better)
Translates to: SLALGERTQKSSKFLKSGQSAHS*TVVPFQ
Trigger: CTGGAATGGGACCACTGTTCATGAATGGGCTGATTG...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGATTACTCCAGTACCTCTaGCTCCACTATCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: SLALGERTQKSSKFLKSGLLQYL*LHYPPS
Trigger: GGATGGAGGATAGTGGAGGCAGAGGTACTGGAGTAA...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACGTCCCACCAATCCACTaGGATCTCCACATAGTCAAT +
Preference number: 4 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNVPPIH*DLHIVN
Trigger: ATTGACTATGTGGAGATCCCAGTGGATTGGTGGGAC...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGAAGACTTCCAGGTGCCTaGGTGTCAGTTCTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGRLPGA*VSVLLC
Trigger: ACACAAAAGAACTGACACCCAGGCACCTGGAAGTCT...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCTCTCACCTTCCACTGTaGAATTATTGGCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFSHLPL*NYWLCF
Trigger: GAAGCAAAGCCAATAATTCCACAGTGGAAGGTGAGA...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGATCAATGTTCTCTCCCTaGTCAGGACTGCAATCGAAT +
Preference number: 4 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGSMFSP*SGLQSN
Trigger: ATTCGATTGCAGTCCTGATCAGGGAGAGAACATTGA...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGACTCCACTTCCATTTTTaGGAGCTGCTGTACTCCATT +
Preference number: 4 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGLHFHF*ELLYSI
Trigger: AATGGAGTACAGCAGCTCTCAAAAATGGAAGTGGAG...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACCTCATTTCTGCTGGCTaGGATGGTGATAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHLISAG*DGDSIF
Trigger: AAAAATACTATCACCATCTCAGCCAGCAGAAATGAG...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATGGTTTTAGGATAGACTaGAATTTCTTTACCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNGFRID*NFFTCS
Trigger: AGAACAGGTAAAGAAATTGCAGTCTATCCTAAAACC...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCAGAGATGATCATCCCTaGTTTCCATTCTCATCAGAT +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFRDDHP*FPFSSD
Trigger: ATCTGATGAGAATGGAAAGCAGGGATGATCATCTCT...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACAGGTACCACTTTTTGTaGTTGCAAGAGACGCTGAAG +
Preference number: 4 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNRYHFL*LQETLK
Trigger: CTTCAGCGTCTCTTGCAAGCACAAAAAGTGGTACCT...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGACTGATCTGGCTGCCGTaGTACACAATAGCATTCATC +
Preference number: 4 (lower is better)
Translates to: SLALGERTQKSSKFLKSGLIWLP*YTIAFI
Trigger: GATGAATGCTATTGTGTACCACGGCAGCCAGATCAG...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGTTGATTTGCACCTTTaGTCAGGAAGGAAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTVDLHL*SGRKSF
Trigger: AAAACTTTTCCTTCCTGACCAAAGGTGCAAATCAAC...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACCTTCTCTGCAGGATCTaGTCTATATCTTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNLLCRI*SISSSQ
Trigger: CTGTGAGGAAGATATAGACCAGATCCTGCAGAGAAG...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGAATTGAATTTGCTTTCTaGGAGAAACCCCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGIEFAF*EKPPQS
Trigger: GGACTGAGGGGGTTTCTCCCAGAAAGCAAATTCAAT...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCAGTGAGAGGAATGCCTaGAATATTTCTCACATTCTG +
Preference number: 4 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFSERNA*NISHIL
Trigger: CAGAATGTGAGAAATATTCCAGGCATTCCTCTCACT...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGAACTGCAATCGAATGGTaGCGGAGATTTGTAGTCAAA +
Preference number: 4 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGTAIEW*RRFVVK
Trigger: TTTGACTACAAATCTCCGTCACCATTCGATTGCAGT...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACTATTGCAATGCTGTTTaGGGTGTTTCTTGTATCCAT +
Preference number: 4 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHYCNAV*GVSCIH
Trigger: ATGGATACAAGAAACACCTCAAACAGCATTGCAATA...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGAGAGAGCTCCTTGAAGTaGACTGATAGCACCAATCTT +
Preference number: 4 (lower is better)
Translates to: SLALGERTQKSSKFLKSGESSLK*TDSTNL
Trigger: AAGATTGGTGCTATCAGTTCACTTCAAGGAGCTCTC...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGAACCCTTCCAGAAGTTTaGAGTTCCTATTCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGTLPEV*SSYSSV
Trigger: GACTGAAGAATAGGAACTGCAAACTTCTGGAAGGGT...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTCTCATCAGATTCTCTaGCTCACTTTCAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNSHQIL*LTFKRL
Trigger: GAGTCTCTTGAAAGTGAGCCAGAGAATCTGATGAGA...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGATCTGTGTTTACATCATaGCCACTCAGCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLALGERTQKSSKFLKSGSVFTS*PLSLSS
Trigger: AGAGGACAAGCTGAGTGGCCATGATGTAAACACAGA...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGACCTGTTCTTCTGTTTTaGGATCACCAAACTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SLALGERTQKSSKFLKSGPVLLF*DHQTPL
Trigger: TAGAGGAGTTTGGTGATCTCAAAACAGAAGAACAGG...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR TCA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGAATCCTTTGGCCATTCTaGGAAGGAATAGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SLALGERTQKSSKFLKSGILWPF*EGIEGF
Trigger: AAAACCCTCTATTCCTTCTCAGAATGGCCAAAGGAT...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR GCA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGAATATTTCTCACATTCTaGAATCCTACCAGGTCCATT +
Preference number: 4 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGIFLTF*NPTRSI
Trigger: AATGGACCTGGTAGGATTGCAGAATGTGAGAAATAT...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CCA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGATTTAAATGGCTCTGTTaGAATAACAGCAGTCTCACC +
Preference number: 4 (lower is better)
Translates to: SLALGERTQKSSKFLKSGFKWLC*NNSSLT
Trigger: GGTGAGACTGCTGTTATTCCAACAGAGCCATTTAAA...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
3UTR CAA 72 bp ACAATTTGGAATTTGGGCCCAATACTAAGATACCGTTaGAGTAGTGAGAAAATGGGAGGGACAAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: TIWNLGPILRYR*SSEKMGGTKLH
Trigger: GTGAAGTTTTGTCCCTCCCATTTTCTCACTACTCAAACGGTATCTTAGTATTGGGCCCAAATTCCAAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp CCACTCGGAAGCACTCAGCGCGGAGGTAGCGTCGGGCTCTGTCGCTaGGGCGTCTGGACCGTGTGGGCCTTTCGTCTGAGTCGCTGTCTA +
Preference number: 5 (lower is better)
Translates to: PLGSTQRGGSVGLCR*GVWTVWAFRLSRCL
Trigger: TAGACAGCGACTCAGACGAAAGGCCCACACGGTCCAGACGCCTCAGCGACAGAGCCCGACGCTACCTCCGCGCTGAGTGCTTCCGAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CCA 90 bp GTGGTTGCCATGGGTGTGTTGAGGAGTCCGCCAACTCCAAACATCTaGGGCACCGCGGCCATGCCTGGCAGCATCATGGGCAGCATGCTC +
Preference number: 5 (lower is better)
Translates to: VVAMGVLRSPPTPNI*GTAAMPGSIMGSML
Trigger: GAGCATGCTGCCCATGATGCTGCCAGGCATGGCCGCGGTGCCCCAGATGTTTGGAGTTGGCGGACTCCTCAACACACCCATGGCAACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp GCTCCTCAGCCTGCCAGGCCAGAGTGGAAGCCGAGAGTGCAGATGTaGGGCCAGCTCCCAGGACAGCAATTGTTTCCCCATCGTCATCCA +
Preference number: 5 (lower is better)
Translates to: APQPARPEWKPRVQM*GQLPGQQLFPHRHP
Trigger: TGGATGACGATGGGGAAACAATTGCTGTCCTGGGAGCTGGCCGCACATCTGCACTCTCGGCTTCCACTCTGGCCTGGCAGGCTGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS GCA 90 bp TTCTGGAGGCTCCTCAGCCTGCCAGGCCAGAGTGGAAGCCGAGAGTaGAGATGTGCGGCCAGCTCCCAGGACAGCAATTGTTTCCCCATC +
Preference number: 5 (lower is better)
Translates to: FWRLLSLPGQSGSRE*RCAASSQDSNCFPI
Trigger: GATGGGGAAACAATTGCTGTCCTGGGAGCTGGCCGCACATCTGCACTCTCGGCTTCCACTCTGGCCTGGCAGGCTGAGGAGCCTCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS-3UTR CAA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACTCCCCATGCCAGCCATaGAGGACAATGGGCGGACGC +
Preference number: 5 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDSPCQP*RTMGGR
Trigger: GCGTCCGCCCATTGTCCTCAATGGCTGGCATGGGGA...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp CTGAGAGGCTGCTTCGAGAACCTGCACTGCTGGATAACACTGGTGTaGGCAGTGCACCTGAGGGCTCATACTGGTGGCTGCAGGGCCACT +
Preference number: 5 (lower is better)
Translates to: LRGCFENLHCWITLV*AVHLRAHTGGCRAT
Trigger: AGTGGCCCTGCAGCCACCAGTATGAGCCCTCAGGTGCACTGCCCACACCAGTGTTATCCAGCAGTGCAGGTTCTCGAAGCAGCCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp GAGGAGTCCGCCAACTCCAAACATCTGGGGCACCGCGGCCATGCCTaGCAGCATCATGGGCAGCATGCTCAGGGTGTTCTTAACCTCTTC +
Preference number: 5 (lower is better)
Translates to: EESANSKHLGHRGHA*QHHGQHAQGVLNLF
Trigger: GAAGAGGTTAAGAACACCCTGAGCATGCTGCCCATGATGCTGCCAGGCATGGCCGCGGTGCCCCAGATGTTTGGAGTTGGCGGACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp CCTCCTCCCTGGCCTGTGCCACGTGTTCTCTCTCTGGGGACACAGTaGCACTGGACTCGGTGCAGTTCTGATCACTGCCTGGCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: PPPWPVPRVLSLGTQ*HWTRCSSDHCLAPF
Trigger: AAAAGGAGCCAGGCAGTGATCAGAACTGCACCGAGTCCAGTGCCACTGTGTCCCCAGAGAGAGAACACGTGGCACAGGCCAGGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACGTCTCCTTGGGCTCCTaGGCTCTCTTCGGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDVSLGS*ALFGSL
Trigger: CAAGGAGCCGAAGAGAGCCAAGGAGCCCAAGGAGAC...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp TACCTTCCTTGGTACCGGAGGCCTCCCGGTGCTTCCGGGGCTTCTTaGCACCGTCTTTCTGCTTTGTCTCCTTGGGCTCCTTGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: YLPWYRRPPGASGAS*HRLSALSPWAPWLS
Trigger: AGAGAGCCAAGGAGCCCAAGGAGACAAAGCAGAAAGACGGTGTCAAGAAGCCCCGGAAGCACCGGGAGGCCTCCGGTACCAAGGAAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CCA 90 bp GCTGACTCCCCATGCCAGCCATTGAGGACAATGGGCGGACGCCCATaGGTGGCAGAGTATTCTTCTAGGCTCCGAGCTTTGGCATCCCTT +
Preference number: 5 (lower is better)
Translates to: ADSPCQPLRTMGGRP*VAEYSSRLRALASL
Trigger: AAGGGATGCCAAAGCTCGGAGCCTAGAAGAATACTCTGCCACCCATGGGCGTCCGCCCATTGTCCTCAATGGCTGGCATGGGGAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp CCCTGGCCTGTGCCACGTGTTCTCTCTCTGGGGACACAGTGGCACTaGACTCGGTGCAGTTCTGATCACTGCCTGGCTCCTTTTCACACA +
Preference number: 5 (lower is better)
Translates to: PWPVPRVLSLGTQWH*TRCSSDHCLAPFHT
Trigger: TGTGTGAAAAGGAGCCAGGCAGTGATCAGAACTGCACCGAGTCCAGTGCCACTGTGTCCCCAGAGAGAGAACACGTGGCACAGGCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAAAGACCACCTCAGGATaGCAGGTGGCCAGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGKTTSG*QVASQS
Trigger: AGACTGGCTGGCCACCTGCAATCCTGAGGTGGTCTT...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp AGAAGCTCTCCTTCTGGATCTGGGCTGCCAGTGCTGCACCATTGCTaGAGCCGTGCTCTGTTGCTTCTGGCTCTGAGAGGCTGCTTCGAG +
Preference number: 5 (lower is better)
Translates to: RSSPSGSGLPVLHHC*SRALLLLALRGCFE
Trigger: CTCGAAGCAGCCTCTCAGAGCCAGAAGCAACAGAGCACGGCTTCAGCAATGGTGCAGCACTGGCAGCCCAGATCCAGAAGGAGAGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp TGCGGGGACCCGCATCTCGAAGCACAGGCTCAGCTAGGGTGTGATTaGATTTGCTTTCTGGGAGAAACCCCCTCAGTCCTGGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: CGDPHLEAQAQLGCD*ICFLGETPSVLAPW
Trigger: CCAAGGAGCCAGGACTGAGGGGGTTTCTCCCAGAAAGCAAATTCAATCACACCCTAGCTGAGCCTGTGCTTCGAGATGCGGGTCCCCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp AGCTTGTCAATCAGCACCAGCTTCCCGGCCGCCTGGATCATGGCCTaGAGCTGGAAGTCAGAGGCTTCGGAGCTGTGCGCTTTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: SLSISTSFPAAWIMA*SWKSEASELCAFLK
Trigger: TTTCAGAAAAGCGCACAGCTCCGAAGCCTCTGACTTCCAGCTGCAGGCCATGATCCAGGCGGCCGGGAAGCTGGTGCTGATTGACAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS GCA 90 bp TCCTTCTGGATCTGGGCTGCCAGTGCTGCACCATTGCTGAAGCCGTaGTCTGTTGCTTCTGGCTCTGAGAGGCTGCTTCGAGAACCTGCA +
Preference number: 5 (lower is better)
Translates to: SFWIWAASAAPLLKP*SVASGSERLLREPA
Trigger: TGCAGGTTCTCGAAGCAGCCTCTCAGAGCCAGAAGCAACAGAGCACGGCTTCAGCAATGGTGCAGCACTGGCAGCCCAGATCCAGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp CCAAAGAGTAGTCAGCCTGCTGCCTCAGCCAGTCAAGTAGGCTCTTaGTGGGAACAGCTTTCTCAGCCTGGCTGCTGGCTGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: PKSSQPAASASQVGS*WEQLSQPGCWLLLL
Trigger: CAACAGCAGCAGCCAGCAGCCAGGCTGAGAAAGCTGTTCCCAGCAAGAGCCTACTTGACTGGCTGAGGCAGCAGGCTGACTACTCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp TTCCTCTTCTGGGTCTCAAGACCGACCATCTCTGAGTGTCTGGCCTaGTGCATGGCTGGCAGAGCCATGCCCATGCCAGGGGAAAGAAAC +
Preference number: 5 (lower is better)
Translates to: FLFWVSRPTISECLA*CMAGRAMPMPGERN
Trigger: GTTTCTTTCCCCTGGCATGGGCATGGCTCTGCCAGCCATGCAGCAGGCCAGACACTCAGAGATGGTCGGTCTTGAGACCCAGAAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp GTGCCACGTGTTCTCTCTCTGGGGACACAGTGGCACTGGACTCGGTaGAGTTCTGATCACTGCCTGGCTCCTTTTCACACACAGACGCAG +
Preference number: 5 (lower is better)
Translates to: VPRVLSLGTQWHWTR*SSDHCLAPFHTQTQ
Trigger: CTGCGTCTGTGTGTGAAAAGGAGCCAGGCAGTGATCAGAACTGCACCGAGTCCAGTGCCACTGTGTCCCCAGAGAGAGAACACGTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp AAGAGTAGTCAGCCTGCTGCCTCAGCCAGTCAAGTAGGCTCTTGCTaGGAACAGCTTTCTCAGCCTGGCTGCTGGCTGCTGCTGTTGGCT +
Preference number: 5 (lower is better)
Translates to: KSSQPAASASQVGSC*EQLSQPGCWLLLLA
Trigger: AGCCAACAGCAGCAGCCAGCAGCCAGGCTGAGAAAGCTGTTCCCAGCAAGAGCCTACTTGACTGGCTGAGGCAGCAGGCTGACTACTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp TCTGGGTCTCAAGACCGACCATCTCTGAGTGTCTGGCCTGCTGCATaGCTGGCAGAGCCATGCCCATGCCAGGGGAAAGAAACATGGAAG +
Preference number: 5 (lower is better)
Translates to: SGSQDRPSLSVWPAA*LAEPCPCQGKETWK
Trigger: CTTCCATGTTTCTTTCCCCTGGCATGGGCATGGCTCTGCCAGCCATGCAGCAGGCCAGACACTCAGAGATGGTCGGTCTTGAGACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGCTGGAGGGTCTGAACTaGCCCGTCTTTGGAAGGTGT +
Preference number: 5 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRLEGLN*PVFGRC
Trigger: ACACCTTCCAAAGACGGGCAAGTTCAGACCCTCCAG...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp ACAAGGGATTGCGCATGCTGGTGGTTAAGTTGGGTCCGCAGCGGACCCTGTGACACTGGGACTCGCCGTTaGCTTCTGGAGACCATCCAA +
Preference number: 5 (lower is better)
Translates to: TRDCACWWLSWVRSGPCDTGTRR*LLETIQ
Trigger: TTGGATGGTCTCCAGAAGCAAACGGCGAGTCCCAGT...GTCACAGGGTCCGCTGCGGACCCAACTTAACCACCAGCATGCGCAATCCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp GAGCCCTGCAAATCATCTCCATATCCTTCTCATTCAGGGGCCACTTaGATCGCCCGTGAGTCAGGATGTCCTTCCACCGGCCCCAGCCAA +
Preference number: 5 (lower is better)
Translates to: EPCKSSPYPSHSGAT*IARESGCPSTGPSQ
Trigger: TTGGCTGGGGCCGGTGGAAGGACATCCTGACTCACGGGCGATTCAAGTGGCCCCTGAATGAGAAGGATATGGAGATGATTTGCAGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS TCA 90 bp TGTTCTCTCTCTGGGGACACAGTGGCACTGGACTCGGTGCAGTTCTaGTCACTGCCTGGCTCCTTTTCACACACAGACGCAGGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: CSLSGDTVALDSVQF*SLPGSFSHTDAGSW
Trigger: CCAAGAGCCTGCGTCTGTGTGTGAAAAGGAGCCAGGCAGTGATCAGAACTGCACCGAGTCCAGTGCCACTGTGTCCCCAGAGAGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp AGCCTTGGGTTTCTCTACTTCAGAGTCCTCGCTCCCCAGGCCATGTaGCCACCTTTCGATGTGTTTACAGTGGCACTGATTGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: SLGFLYFRVLAPQAM*PPFDVFTVALIGWG
Trigger: CCCCCAGCCAATCAGTGCCACTGTAAACACATCGAAAGGTGGGCACATGGCCTGGGGAGCGAGGACTCTGAAGTAGAGAAACCCAAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp GCTCTGTTGCTTCTGGCTCTGAGAGGCTGCTTCGAGAACCTGCACTaGTGGATAACACTGGTGTGGGCAGTGCACCTGAGGGCTCATACT +
Preference number: 5 (lower is better)
Translates to: ALLLLALRGCFENLH*WITLVWAVHLRAHT
Trigger: AGTATGAGCCCTCAGGTGCACTGCCCACACCAGTGTTATCCAGCAGTGCAGGTTCTCGAAGCAGCCTCTCAGAGCCAGAAGCAACAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp CTGTTGCTTCTGGCTCTGAGAGGCTGCTTCGAGAACCTGCACTGCTaGATAACACTGGTGTGGGCAGTGCACCTGAGGGCTCATACTGGT +
Preference number: 5 (lower is better)
Translates to: LLLLALRGCFENLHC*ITLVWAVHLRAHTG
Trigger: ACCAGTATGAGCCCTCAGGTGCACTGCCCACACCAGTGTTATCCAGCAGTGCAGGTTCTCGAAGCAGCCTCTCAGAGCCAGAAGCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp TCTTTTTCCTCTTCTGGGTCTCAAGACCGACCATCTCTGAGTGTCTaGCCTGCTGCATGGCTGGCAGAGCCATGCCCATGCCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: SFSSSGSQDRPSLSV*PAAWLAEPCPCQGK
Trigger: TTTCCCCTGGCATGGGCATGGCTCTGCCAGCCATGCAGCAGGCCAGACACTCAGAGATGGTCGGTCTTGAGACCCAGAAGAGGAAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGCCTGTTTCTGCATCCTaGGTGTGGGCCACTTCTAAG +
Preference number: 5 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRPVSAS*VWATSK
Trigger: CTTAGAAGTGGCCCACACCAAGGATGCAGAAACAGG...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTGCTGGCTGCTGCTGTaGGCTCAGGAGCTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: APPCSILQHGAGECMLLTCWLLL*AQELRK
Trigger: CTTCCTCAGCTCCTGAGCCAACAGCAGCAGCCAGCA...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp ATCATCTCCATATCCTTCTCATTCAGGGGCCACTTGAATCGCCCGTaGGTCAGGATGTCCTTCCACCGGCCCCAGCCAAAGATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: IISISFSFRGHLNRP*VRMSFHRPQPKMSR
Trigger: CCTGCTCATCTTTGGCTGGGGCCGGTGGAAGGACATCCTGACTCACGGGCGATTCAAGTGGCCCCTGAATGAGAAGGATATGGAGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CCA 90 bp TGTCCTGTATCTAAGGTAGGGGACACTAAGCATTTGGCCTCTCGGTaGCCTATGGTTTCAGGTCTCCGTCCTGTCTCACTGCAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: CPVSKVGDTKHLASR*PMVSGLRPVSLQQG
Trigger: GCCCTGCTGCAGTGAGACAGGACGGAGACCTGAAACCATAGGCCACCGAGAGGCCAAATGCTTAGTGTCCCCTACCTTAGATACAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp CTGAGAAGGAATAGAGGGTTTTCTCCTGCAGTAGCTGAGCAATGGTaGGAGCCCGCACTTCCTGTGCCTCTTCCCCAAGGTCTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: LRRNRGFSPAVAEQW*EPALPVPLPQGLLQ
Trigger: TTGCAGGAGACCTTGGGGAAGAGGCACAGGAAGTGCGGGCTCCCACCATTGCTCAGCTACTGCAGGAGAAAACCCTCTATTCCTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp CTGCTGGATAACACTGGTGTGGGCAGTGCACCTGAGGGCTCATACTaGTGGCTGCAGGGCCACTTCCCCTTTAACACCACATGGCAAATA +
Preference number: 5 (lower is better)
Translates to: LLDNTGVGSAPEGSY*WLQGHFPFNTTWQI
Trigger: TATTTGCCATGTGGTGTTAAAGGGGAAGTGGCCCTGCAGCCACCAGTATGAGCCCTCAGGTGCACTGCCCACACCAGTGTTATCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTGTGGTCCAGCAGTCTaGCTCACCACCTCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: APPCSILQHGAGECMLLTCGPAV*LTTSSL
Trigger: AAGGCTGGAGGTGGTGAGCAAGACTGCTGGACCACA...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGAGTTGCCATGGGTGTGTaGAGGAGTCCGCCAACTCCA +
Preference number: 5 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGVAMGV*RSPPTP
Trigger: TGGAGTTGGCGGACTCCTCAACACACCCATGGCAAC...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp GGCTGGGCCTGCAAAGCTGGAGGCGCTCATGTAGTTGAGGACACATaGGCACCTGCTCACGGACTTTCCTCAGCAGTTCAATACGGTATA +
Preference number: 5 (lower is better)
Translates to: GWACKAGGAHVVEDT*APAHGLSSAVQYGI
Trigger: TATACCGTATTGAACTGCTGAGGAAAGTCCGTGAGCAGGTGCTCATGTGTCCTCAACTACATGAGCGCCTCCAGCTTTGCAGGCCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp CCGTGGGCATGGTGGCAAAACCAGCTGGGAAGCCCACCAGCCCAGTaGGAGGAATGCCTGGAATATTTCTCACATTCTGCAATCCTACCA +
Preference number: 5 (lower is better)
Translates to: PWAWWQNQLGSPPAQ*EECLEYFSHSAILP
Trigger: TGGTAGGATTGCAGAATGTGAGAAATATTCCAGGCATTCCTCTCACTGGGCTGGTGGGCTTCCCAGCTGGTTTTGCCACCATGCCCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp TCATTGTATTTTCTGCGCTTTACTTGCCGTCCTGAGCGCCGTTTCTaGCTGTCTGCAGACTCACTGGGCTCCTCAGGGCTCTGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: SLYFLRFTCRPERRF*LSADSLGSSGLCRD
Trigger: ATCTCTGCAGAGCCCTGAGGAGCCCAGTGAGTCTGCAGACAGCCAGAAACGGCGCTCAGGACGGCAAGTAAAGCGCAGAAAATACAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CCA 90 bp GCAGTCTTGCTCACCACCTCCAGCCTTCCTTTCTTGGCTTCATCTTaGTGGAAGCTGAGGTTCTTCCCCCTTGGGATGTTTACAGTGGGC +
Preference number: 5 (lower is better)
Translates to: AVLLTTSSLPFLASS*WKLRFFPLGMFTVG
Trigger: GCCCACTGTAAACATCCCAAGGGGGAAGAACCTCAGCTTCCACCAAGATGAAGCCAAGAAAGGAAGGCTGGAGGTGGTGAGCAAGACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp GGTGTTCTTAACCTCTTCACCCGTGGGCATGGTGGCAAAACCAGCTaGGAAGCCCACCAGCCCAGTGAGAGGAATGCCTGGAATATTTCT +
Preference number: 5 (lower is better)
Translates to: GVLNLFTRGHGGKTS*EAHQPSERNAWNIS
Trigger: AGAAATATTCCAGGCATTCCTCTCACTGGGCTGGTGGGCTTCCCAGCTGGTTTTGCCACCATGCCCACGGGTGAAGAGGTTAAGAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGTGGCCTTCTTGGACTTaGTCCTGGATCCATAATCAG +
Preference number: 5 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRWPSWT*SWIHNQ
Trigger: CTGATTATGGATCCAGGACAAAGTCCAAGAAGGCCA...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACTTCTCTCCACTGGGGTaGGTCCTTGCTCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYFSPLG*VLAPCW
Trigger: CCAGCAGGGAGCAAGGACCAACCCCAGTGGAGAGAA...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCCACAGACGCAGGCTCTaGGGTGGGGCTGTCCCCCTT +
Preference number: 5 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFHRRRL*GGAVPL
Trigger: AAGGGGGACAGCCCCACCCAAGAGCCTGCGTCTGTG...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp GCTCCTTGGGGACAGCAGGAACCCTCTCTTCTCCACCTAGAGAGCTaGTGTCTAATTTTCCAGGTTCTTTGCAGCGTGGTCTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: APWGQQEPSLLHLES*CLIFQVLCSVVSSA
Trigger: AGCAGAGGAGACCACGCTGCAAAGAACCTGGAAAATTAGACATCAGCTCTCTAGGTGGAGAAGAGAGGGTTCCTGCTGTCCCCAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp CGCAGCCGGTTACTGTTCCTATACTCACGGGATGTCTCCAGTTTCTaGCACGCATCAGAGGCAGGTCGTTCCACATGTTTAACTTCAGGG +
Preference number: 5 (lower is better)
Translates to: RSRLLFLYSRDVSSF*HASEAGRSTCLTSG
Trigger: CCCTGAAGTTAAACATGTGGAACGACCTGCCTCTGATGCGTGGCAGAAACTGGAGACATCCCGTGAGTATAGGAACAGTAACCGGCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS GCA 90 bp AGCCATCCTGGGCTGCCTGGCTGTCATCCTTCTTTTCACCAAAAATaGCATCACTTCCATCACTGGGACTCGCCGTTTGCTTCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: SHPGLPGCHPSFHQK*HHFHHWDSPFASGD
Trigger: GTCTCCAGAAGCAAACGGCGAGTCCCAGTGATGGAAGTGATGGCATTTTTGGTGAAAAGAAGGATGACAGCCAGGCAGCCCAGGATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp GGCCCTTCTGGGTTCTTTTGGCTCTTTAGGTTCTCGCTTCCTCTTTaGCTTAGGCTCTCTGTCCTTGCTTCCCTTTGTCCCCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: GPSGFFWLFRFSLPL*LRLSVLASLCPLLL
Trigger: GAGCAAGAGGGGACAAAGGGAAGCAAGGACAGAGAGCCTAAGCCAAAGAGGAAGCGAGAACCTAAAGAGCCAAAAGAACCCAGAAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CCA 90 bp CTGGATAACACTGGTGTGGGCAGTGCACCTGAGGGCTCATACTGGTaGCTGCAGGGCCACTTCCCCTTTAACACCACATGGCAAATATTA +
Preference number: 5 (lower is better)
Translates to: LDNTGVGSAPEGSYW*LQGHFPFNTTWQIL
Trigger: TAATATTTGCCATGTGGTGTTAAAGGGGAAGTGGCCCTGCAGCCACCAGTATGAGCCCTCAGGTGCACTGCCCACACCAGTGTTATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACTGTCCTTGCTTCCCTTaGTCCCCTCTTGCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYCPCFP*SPLAPL
Trigger: CAGGGGAGCAAGAGGGGACAAAGGGAAGCAAGGACA...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGACTCCCAGGACAGCAATaGTTTCCCCATCGTCATCCA +
Preference number: 5 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGLPGQQ*FPHRHP
Trigger: TGGATGACGATGGGGAAACAATTGCTGTCCTGGGAG...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTATGACGACGTGGAACTaGAAGACTCCTGAAAGGGGG +
Preference number: 5 (lower is better)
Translates to: APPCSILQHGAGECMLLTMTTWN*KTPERG
Trigger: CCCCCTTTCAGGAGTCTTCAAGTTCCACGTCGTCAT...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGTCCACTGTGGAATTATaGGCTTTGCTTCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRSTVEL*ALLLYR
Trigger: CCTGTACAGAAGCAAAGCCAATAATTCCACAGTGGA...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp CATTCTGCAATCCTACCAGGTCCATTCCCGCAATCAGCCCATTCATaGACAGTGGTCCCATTCCAGAAGGAGAGTCCGCTACAATGGCTG +
Preference number: 5 (lower is better)
Translates to: HSAILPGPFPQSAHS*TVVPFQKESPLQWL
Trigger: CAGCCATTGTAGCGGACTCTCCTTCTGGAATGGGACCACTGTTCATGAATGGGCTGATTGCGGGAATGGACCTGGTAGGATTGCAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp AACCTCCTGGACAGTCTTGGATGCCAGGATCTTCTCAATTATGTTTaGATCATCTTCTGGAGGCTCCTCAGCCTGCCAGGCCAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: NLLDSLGCQDLLNYV*IIFWRLLSLPGQSG
Trigger: TCCACTCTGGCCTGGCAGGCTGAGGAGCCTCCAGAAGATGATGCAAACATAATTGAGAAGATCCTGGCATCCAAGACTGTCCAGGAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CCA 90 bp TGGAATTATTGGCTTTGCTTCTGTACAGGTCTGGCTGATAAGCCTTaGGTTTCTCTACTTCAGAGTCCTCGCTCCCCAGGCCATGTGCCC +
Preference number: 5 (lower is better)
Translates to: WNYWLCFCTGLADKP*VSLLQSPRSPGHVP
Trigger: GGGCACATGGCCTGGGGAGCGAGGACTCTGAAGTAGAGAAACCCAAGGCTTATCAGCCAGACCTGTACAGAAGCAAAGCCAATAATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp TCATCTTTTGTGAATACTGGGGCTAAGAAGCTCTCCTTCTGGATCTaGGCTGCCAGTGCTGCACCATTGCTGAAGCCGTGCTCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: SSFVNTGAKKLSFWI*AASAAPLLKPCSVA
Trigger: AGCAACAGAGCACGGCTTCAGCAATGGTGCAGCACTGGCAGCCCAGATCCAGAAGGAGAGCTTCTTAGCCCCAGTATTCACAAAAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp CAATCCTACCAGGTCCATTCCCGCAATCAGCCCATTCATGAACAGTaGTCCCATTCCAGAAGGAGAGTCCGCTACAATGGCTGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: QSYQVHSRNQPIHEQ*SHSRRRVRYNGWSF
Trigger: AAAGCTCCAGCCATTGTAGCGGACTCTCCTTCTGGAATGGGACCACTGTTCATGAATGGGCTGATTGCGGGAATGGACCTGGTAGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACCACCGTCTTTCTGCTTaGTCTCCTTGGGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYHRLSA*SPWAPW
Trigger: CCAAGGAGCCCAAGGAGACAAAGCAGAAAGACGGTG...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAAGTCCAGGTCCTCATaGTATTTTCTGCGCTTTACT +
Preference number: 5 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRKSRSS*YFLRFT
Trigger: AGTAAAGCGCAGAAAATACAATGAGGACCTGGACTT...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGAAACCCTTCCAGAAGTTaGCAGTTCCTATTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: LAGSSLSRGCPWRRPSGGNPSRS*QFLFFS
Trigger: ACTGAAGAATAGGAACTGCAAACTTCTGGAAGGGTT...TCCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TTTGGCTGGTTCAAGTCTCAGCAGGGGCTGTCCTTGGAGGAGACCCTCAGGAGGTTCAATGATGGTCTCTaGCTTAGGAGCAAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: FGWFKSQQGLSLEETLRRFNDGL*LRSKVL
Trigger: AAGAACCTTGCTCCTAAGCAAGAGACCATCATTGAA...CCTCCTGAGGGTCTCCTCCAAGGACAGCCCCTGCTGAGACTTGAACCAGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATGCAAAAGTGGACCCCTaGCCTTCTGACTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNAKVDP*PSDWMV
Trigger: CACCATCCAGTCAGAAGGCAAGGGGTCCACTTTTGC...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCACTGGCCAGGGTGATTaGTCTGGGTCGGAGCCATCC +
Preference number: 5 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFTGQGD*SGSEPS
Trigger: GGATGGCTCCGACCCAGACAAATCACCCTGGCCAGT...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGAAATTTTCCAGGTTCTTaGCAGCGTGGTCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGNFPGS*QRGLLC
Trigger: GCAGAGGAGACCACGCTGCAAAGAACCTGGAAAATT...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp GGGTTGAAAGCCACAGGACTACTAGTAGTTATTGTGGGTTCTGACTaGTCAGAAAACGGACTAGGGCCAGGCTTGTCGTCTACCAGAGCG +
Preference number: 5 (lower is better)
Translates to: GLKATGLLVVIVGSD*SENGLGPGLSSTRA
Trigger: CGCTCTGGTAGACGACAAGCCTGGCCCTAGTCCGTTTTCTGATCAGTCAGAACCCACAATAACTACTAGTAGTCCTGTGGCTTTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp GGGTTCAACATAGATGCTGGCATCAGGGGGACCATCATCTTTCCATaGGGGGAGACGACACACATTCCGACACATGGCTACAAAGCTATA +
Preference number: 5 (lower is better)
Translates to: GFNIDAGIRGTIIFP*GETTHIPTHGYKAI
Trigger: TATAGCTTTGTAGCCATGTGTCGGAATGTGTGTCGTCTCCCCGCATGGAAAGATGATGGTCCCCCTGATGCCAGCATCTATGTTGAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp ATAACACTGGTGTGGGCAGTGCACCTGAGGGCTCATACTGGTGGCTaGAGGGCCACTTCCCCTTTAACACCACATGGCAAATATTATCTA +
Preference number: 5 (lower is better)
Translates to: ITLVWAVHLRAHTGG*RATSPLTPHGKYYL
Trigger: TAGATAATATTTGCCATGTGGTGTTAAAGGGGAAGTGGCCCTGCAGCCACCAGTATGAGCCCTCAGGTGCACTGCCCACACCAGTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp CCCACCAGCCCAGTGAGAGGAATGCCTGGAATATTTCTCACATTCTaGAATCCTACCAGGTCCATTCCCGCAATCAGCCCATTCATGAAC +
Preference number: 5 (lower is better)
Translates to: PTSPVRGMPGIFLTF*NPTRSIPAISPFMN
Trigger: GTTCATGAATGGGCTGATTGCGGGAATGGACCTGGTAGGATTGCAGAATGTGAGAAATATTCCAGGCATTCCTCTCACTGGGCTGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp TCACTGGGCTCCTCAGGGCTCTGCAGAGATGGGTTTGGAAGACTGTaGTCCAGCTCTAAACTCTCCACGGTGGTTTCGTTTTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: SLGSSGLCRDGFGRL*SSSKLSTVVSFFLF
Trigger: AAAAAGGAAAAACGAAACCACCGTGGAGAGTTTAGAGCTGGACCACAGTCTTCCAAACCCATCTCTGCAGAGCCCTGAGGAGCCCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CCA 90 bp CTAGGGCCAGGCTTGTCGTCTACCAGAGCGTCTGTGTTTACATCATaGCCACTCAGCTTGTCCTCTGTAGATTTTTCAGTGGCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: LGPGLSSTRASVFTS*PLSLSSVDFSVAEV
Trigger: TACCTCAGCCACTGAAAAATCTACAGAGGACAAGCTGAGTGGCCATGATGTAAACACAGACGCTCTGGTAGACGACAAGCCTGGCCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATTTCTGCTTTGTCTCCTaGGGCTCCTTGGCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNFCFVS*GSLALF
Trigger: GAAGAGAGCCAAGGAGCCCAAGGAGACAAAGCAGAA...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGATTGTTCCTAAATCGCTaGATCTTCTGTGCGATGCGG +
Preference number: 5 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGLFLNR*IFCAMR
Trigger: CCGCATCGCACAGAAGATCAAGCGATTTAGGAACAA...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACCTCTCATACCCGTGCTaGAACACGCCAATGAGAAGG +
Preference number: 5 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYLSYPC*NTPMRR
Trigger: CCTTCTCATTGGCGTGTTCAAGCACGGGTATGAGAG...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTCTCCTCTGCTTGGGTTaGTCTGAAAAACTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: APPCSILQHGAGECMLLTLLCLG*SEKLVP
Trigger: TGGGACAAGTTTTTCAGACAAACCCAAGCAGAGGAG...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp GGCTGTCATCCTTCTTTTCACCAAAAATGCCATCACTTCCATCACTaGGACTCGCCGTTTGCTTCTGGAGACCATCCAACTTGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: GCHPSFHQKCHHFHH*DSPFASGDHPTCPQ
Trigger: CTGAGGACAAGTTGGATGGTCTCCAGAAGCAAACGGCGAGTCCCAGTGATGGAAGTGATGGCATTTTTGGTGAAAAGAAGGATGACAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp CTCACCTTCCACTGTGGAATTATTGGCTTTGCTTCTGTACAGGTCTaGCTGATAAGCCTTGGGTTTCTCTACTTCAGAGTCCTCGCTCCC +
Preference number: 5 (lower is better)
Translates to: LTFHCGIIGFASVQV*LISLGFLYFRVLAP
Trigger: GGGAGCGAGGACTCTGAAGTAGAGAAACCCAAGGCTTATCAGCCAGACCTGTACAGAAGCAAAGCCAATAATTCCACAGTGGAAGGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGACACTGGGGTTGGTCCTaGCTCCCTGCTGGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGHWGWS*LPAGLL
Trigger: AAGAAGGCCAGCAGGGAGCAAGGACCAACCCCAGTG...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATTCGTCATCCACCACTTaGAAGTCCAGGTCCTCATTG +
Preference number: 5 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNSSSTT*KSRSSL
Trigger: CAATGAGGACCTGGACTTCAAAGTGGTGGATGACGA...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp GCTCCTCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTTCATCTGGGCCTGTTaGTTCCTAAATCGCTTGATC +
Preference number: 5 (lower is better)
Translates to: APPCSILQHGAGECMLLTFIWAC*FLNRLI
Trigger: GATCAAGCGATTTAGGAACAAACAGGCCCAGATGAA...AGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACAGCTGCTGTACTCCATaGGTGCTGCCCTTTCGGTTG +
Preference number: 5 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHSCCTP*VLPFRL
Trigger: CAACCGAAAGGGCAGCACCAATGGAGTACAGCAGCT...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGACTCAGTCCTGGCTCCTaGGGGACAGCAGGAACCCTC +
Preference number: 5 (lower is better)
Translates to: SLALGERTQKSSKFLKSGLSPGS*GTAGTL
Trigger: GAGGGTTCCTGCTGTCCCCAAGGAGCCAGGACTGAG...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp TTCTGCCTCAATACCAGGAGGCTGGCAGCTCTCATTTCTGCTGGCTaGGATGGTGATAGTATTTTTCCTGGACTGTGTGTTGGTAGTTGG +
Preference number: 5 (lower is better)
Translates to: FCLNTRRLAALISAG*DGDSIFPGLCVGSW
Trigger: CCAACTACCAACACACAGTCCAGGAAAAATACTATCACCATCTCAGCCAGCAGAAATGAGAGCTGCCAGCCTCCTGGTATTGAGGCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp GTGCTTCATCTGGGCCTGTTTGTTCCTAAATCGCTTGATCTTCTGTaGGATGCGGGGATCCTTTTCCAGTTCTTCCATTGTGGCCCATTT +
Preference number: 5 (lower is better)
Translates to: VLHLGLFVPKSLDLL*DAGILFQFFHCGPF
Trigger: AAATGGGCCACAATGGAAGAACTGGAAAAGGATCCCCGCATCGCACAGAAGATCAAGCGATTTAGGAACAAACAGGCCCAGATGAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CCA 90 bp TTTCTGTTGTACCAGTTGAAAAGAAGCCAGTTCATCCCCTCGAGTTaGTACTCTCGCAGCCGGTTACTGTTCCTATACTCACGGGATGTC +
Preference number: 5 (lower is better)
Translates to: FLLYQLKRSQFIPSS*YSRSRLLFLYSRDV
Trigger: GACATCCCGTGAGTATAGGAACAGTAACCGGCTGCGAGAGTACCAACTCGAGGGGATGAACTGGCTTCTTTTCAACTGGTACAACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CCA 90 bp GGCTCATACTGGTGGCTGCAGGGCCACTTCCCCTTTAACACCACATaGCAAATATTATCTAGGCGGTTAATTATCACACGATCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: GSYWWLQGHFPFNTT*QILSRRLIITRSFG
Trigger: GCCAAAGGATCGTGTGATAATTAACCGCCTAGATAATATTTGCCATGTGGTGTTAAAGGGGAAGTGGCCCTGCAGCCACCAGTATGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTTCTCTTTACCTTCCTaGGTACCGGAGGCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNFSLPS*VPEASR
Trigger: CCGGGAGGCCTCCGGTACCAAGGAAGGTAAAGAGAA...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCTCTGCAGAGATGGGTTaGGAAGACTGTGGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFSAEMG*EDCGPA
Trigger: AGCTGGACCACAGTCTTCCAAACCCATCTCTGCAGA...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGACCTGTGAGCAGCACTTaGTGTTCCAGGGCCATGAGC +
Preference number: 5 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGPVSST*CSRAMS
Trigger: GCTCATGGCCCTGGAACACAAAGTGCTGCTCACAGG...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACATCCAGCCTGAAGTGTTaGCTCCTTCAGGAAGATGAG +
Preference number: 5 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTSSLKC*LLQEDE
Trigger: CTCATCTTCCTGAAGGAGCAAACACTTCAGGCTGGA...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp AAATGGGTTGAAAGCCACAGGACTACTAGTAGTTATTGTGGGTTCTaGCTGATCAGAAAACGGACTAGGGCCAGGCTTGTCGTCTACCAG +
Preference number: 5 (lower is better)
Translates to: KWVESHRTTSSYCGF*LIRKRTRARLVVYQ
Trigger: CTGGTAGACGACAAGCCTGGCCCTAGTCCGTTTTCTGATCAGTCAGAACCCACAATAACTACTAGTAGTCCTGTGGCTTTCAACCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp ATGTTGCCTCTTTCAGGAATGTCCGAAGTTCCATCTGTAACTCCCTaGTCTGCAGAAAGGGACTTCTCATCAGGCATGCCAACTTTCTCT +
Preference number: 5 (lower is better)
Translates to: MLPLSGMSEVPSVTP*SAERDFSSGMPTFS
Trigger: AGAGAAAGTTGGCATGCCTGATGAGAAGTCCCTTTCTGCAGAGCAGGGAGTTACAGATGGAACTTCGGACATTCCTGAAAGAGGCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 90 bp GAGCTGATGTCTAATTTTCCAGGTTCTTTGCAGCGTGGTCTCCTCTaGTTGGGTTTGTCTGAAAAACTTGTCCCAAAGCCAGGAACATCC +
Preference number: 5 (lower is better)
Translates to: ELMSNFPGSLQRGLL*LGLSEKLVPKPGTS
Trigger: GGATGTTCCTGGCTTTGGGACAAGTTTTTCAGACAAACCCAAGCAGAGGAGACCACGCTGCAAAGAACCTGGAAAATTAGACATCAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp GAGATGGGTTTGGAAGACTGTGGTCCAGCTCTAAACTCTCCACGGTaGTTTCGTTTTTCCTTTTTCCTTTCTTCTTTCTCTCCACTGGGG +
Preference number: 5 (lower is better)
Translates to: EMGLEDCGPALNSPR*FRFSFFLSSFSPLG
Trigger: CCCCAGTGGAGAGAAAGAAGAAAGGAAAAAGGAAAAACGAAACCACCGTGGAGAGTTTAGAGCTGGACCACAGTCTTCCAAACCCATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CCA 90 bp GACCATCATCTTTCCATGCGGGGAGACGACACACATTCCGACACATaGCTACAAAGCTATAAAAATAGTGCTCCAGGCTCTCATCTGACT +
Preference number: 5 (lower is better)
Translates to: DHHLSMRGDDTHSDT*LQSYKNSAPGSHLT
Trigger: AGTCAGATGAGAGCCTGGAGCACTATTTTTATAGCTTTGTAGCCATGTGTCGGAATGTGTGTCGTCTCCCCGCATGGAAAGATGATGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGAGCTCTCTTCGGCTCCTaGGCCCTTCTGGGTTCTTTT +
Preference number: 5 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGALFGS*ALLGSF
Trigger: AAAAGAACCCAGAAGGGCCAAGGAGCCGAAGAGAGC...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp GGAGGAGACCCTCAGGAGGAACATGATGTAAGGGTGAGGGGAAAGAAAACGGGATTTCCAGTTCTTCCATaGTGGCCCATTTACAATGTA +
Preference number: 5 (lower is better)
Translates to: GGDPQEEHDVRVRGKKTGFPVLP*WPIYNV
Trigger: TACATTGTAAATGGGCCACAATGGAAGAACTGGAAA...TCCCGTTTTCTTTCCCCTCACCCTTACATCATGTTCCTCCTGAGGGTCTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACTCCAGCCTTCCTTTCTaGGCTTCATCTTGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHSSLPF*ASSWWK
Trigger: CTTCCACCAAGATGAAGCCAAGAAAGGAAGGCTGGA...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp GATCATCTCAAACGTTGTGATGACGACGTGGAACTTGAAGACTCCTaGAAGGGGGTTTCCCTGTGCATCTCTGTATACCATTTCGTACTG +
Preference number: 5 (lower is better)
Translates to: DHLKRCDDDVELEDS*KGVSLCISVYHFVL
Trigger: CAGTACGAAATGGTATACAGAGATGCACAGGGAAACCCCCTTTCAGGAGTCTTCAAGTTCCACGTCGTCATCACAACGTTTGAGATGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS TCA 90 bp TTGTTGATGAGGTCCATTTCTGAAGTTCTCCTGAACACTTCCTCCTaGACCCAGTATCCTTGGTTACCTGGGCCTAAGATTTCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: LLMRSISEVLLNTSS*TQYPWLPGPKISGL
Trigger: CAGACCTGAAATCTTAGGCCCAGGTAACCAAGGATACTGGGTTCAGGAGGAAGTGTTCAGGAGAACTTCAGAAATGGACCTCATCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp GTGATAGTATTTTTCCTGGACTGTGTGTTGGTAGTTGGGGCCTCCTaGAAAGAATGCGGCTCTTGGCTGAGTCCTGTCTTACCATATATC +
Preference number: 5 (lower is better)
Translates to: VIVFFLDCVLVVGAS*KECGSWLSPVLPYI
Trigger: GATATATGGTAAGACAGGACTCAGCCAAGAGCCGCATTCTTTTCAGGAGGCCCCAACTACCAACACACAGTCCAGGAAAAATACTATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp AGGGGAAAGAAACATGGAAGGGTAGATGAGTCCAGGAGACACTCCTaGGATGAGAAATGGGTTGAAAGCCACAGGACTACTAGTAGTTAT +
Preference number: 5 (lower is better)
Translates to: RGKKHGRVDESRRHS*DEKWVESHRTTSSY
Trigger: ATAACTACTAGTAGTCCTGTGGCTTTCAACCCATTTCTCATCCCAGGAGTGTCTCCTGGACTCATCTACCCTTCCATGTTTCTTTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACCCTCCACTTCCATTTTaGAGAGCTGCTGTACTCCAT +
Preference number: 5 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHPPLPF*RAAVLH
Trigger: ATGGAGTACAGCAGCTCTCAAAAATGGAAGTGGAGG...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp CGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGAACCTTGCCTGACTGACAATCTCAAAAGCACCTTATaGCAATGCTGTTTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: RSWRVYAADLTEPCLTDNLKSTL*QCCLRC
Trigger: ACACCTCAAACAGCATTGCAATAAGGTGCTTTTGAG...ATTGTCAGTCAGGCAAGGTTCTGTTAAGTCAGCAGCATACACTCTCCAGCTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACATCTAGTCCACCTTTTTaGGGCTTCCTTGTTGATGAG +
Preference number: 5 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTSSPPF*GFLVDE
Trigger: CTCATCAACAAGGAAGCCCAAAAAAGGTGGACTAGA...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCCCTATAGAAGTCAGCTaGCTCTCTTCTAGTCCACCT +
Preference number: 5 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFPIEVS*LSSSPP
Trigger: AGGTGGACTAGAAGAGAGCAAGCTGACTTCTATAGG...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTCCATGTCTTCTGGTTaGGGCTCACTTCCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNSMSSG*GSLPSG
Trigger: TCCTGAGGGAAGTGAGCCCAAACCAGAAGACATGGA...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTTTGCCTGGGTAGTCTaGACTGAGGCAGGTTCCATC +
Preference number: 5 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNFAWVV*TEAGSI
Trigger: GATGGAACCTGCCTCAGTCAAGACTACCCAGGCAAA...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGACTCCTGAGGCTTCCGTaGACAATCTGCCCAGTCACT +
Preference number: 5 (lower is better)
Translates to: SLALGERTQKSSKFLKSGLLRLP*TICPVT
Trigger: AGTGACTGGGCAGATTGTCAACGGAAGCCTCAGGAG...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACCGTGGTCTCCTCTGCTaGGGTTTGTCTGAAAAACTT +
Preference number: 5 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHRGLLC*GLSEKL
Trigger: AAGTTTTTCAGACAAACCCAAGCAGAGGAGACCACG...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGGATGAGAAATGGGTaGAAAGCCACAGGACTACTA +
Preference number: 5 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFGMRNG*KATGLL
Trigger: TAGTAGTCCTGTGGCTTTCAACCCATTTCTCATCCC...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp AGCTTCTTCAATGTTCTCTCCCTGATCAGGACTGCAATCGAATGGTaGCGGAGATTTGTAGTCAAAGTTAACAGAGGCATCCGACATTGG +
Preference number: 5 (lower is better)
Translates to: SFFNVLSLIRTAIEW*RRFVVKVNRGIRHW
Trigger: CCAATGTCGGATGCCTCTGTTAACTTTGACTACAAATCTCCGTCACCATTCGATTGCAGTCCTGATCAGGGAGAGAACATTGAAGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CCA 90 bp ATGAGAGAGGAAGCTGAAGTAATTTCTGCCTCAATACCAGGAGGCTaGCAGCTCTCATTTCTGCTGGCTGAGATGGTGATAGTATTTTTC +
Preference number: 5 (lower is better)
Translates to: MREEAEVISASIPGG*QLSFLLAEMVIVFF
Trigger: GAAAAATACTATCACCATCTCAGCCAGCAGAAATGAGAGCTGCCAGCCTCCTGGTATTGAGGCAGAAATTACTTCAGCTTCCTCTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp ATCACAACAGCAGTCAACAGAAGCCTGAACACCCGAGAGTTAACATACAGGTTCATTGGGCATGTTGTGTaGATTTGCACCTTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: ITTAVNRSLNTRELTYRFIGHVV*ICTFGQ
Trigger: CTGACCAAAGGTGCAAATCAACACAACATGCCCAAT...GAACCTGTATGTTAACTCTCGGGTGTTCAGGCTTCTGTTGACTGCTGTTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp ACGAGCTTGCACTTACGTTCATCTTTGCTCTTTGGCCCCACAGTGAATCCCTACAGCTCCATCATAGTATaGATAAGATTGGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: TSLHLRSSLLFGPTVNPYSSIIV*IRLGML
Trigger: CAACATGCCCAATCTTATCAATACTATGATGGAGCT...GTAGGGATTCACTGTGGGGCCAAAGAGCAAAGATGAACGTAAGTGCAAGCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACAGGGACGTCTGTGCTTTaGTTCATCTTTTGTGAATAC +
Preference number: 5 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTGTSVL*FIFCEY
Trigger: GTATTCACAAAAGATGAACAAAAGCACAGACGTCCC...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp AATAGTGCTCCAGGCTCTCATCTGACTTCTTGTCCAAACGAGAAATaGTGCGGAACTGTGTCCAGTCAAAGGCTTTCTTTTCTTGGTCAT +
Preference number: 5 (lower is better)
Translates to: NSAPGSHLTSCPNEK*CGTVSSQRLSFLGH
Trigger: ATGACCAAGAAAAGAAAGCCTTTGACTGGACACAGTTCCGCATCATTTCTCGTTTGGACAAGAAGTCAGATGAGAGCCTGGAGCACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TTTATATGCTGTAGACTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACGCATGTTGTGTTGATTaGCACCTTTGGTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: FICCRLRYSVTKTTGHLNACCVD*HLWSGR
Trigger: CCTTCCTGACCAAAGGTGCAAATCAACACAACATGC...GTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAGTCTACAGCATATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACATCTTCTTTATCTATGTaGCCTCTTTCAGGAATGTCC +
Preference number: 5 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTSSLSM*PLSGMS
Trigger: GGACATTCCTGAAAGAGGCAACATAGATAAAGAAGA...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp GACTCAGGCAGCAAGTTTTCATCATGGTCAAGAGAAATGACCTCCTaGACTTTGGAAACAAAGTTTTCACACGTTATGTCAGGTAAGCCG +
Preference number: 5 (lower is better)
Translates to: DSGSKFSSWSREMTS*TLETKFSHVMSGKP
Trigger: CGGCTTACCTGACATAACGTGTGAAAACTTTGTTTCCAAAGTTCAGGAGGTCATTTCTCTTGACCATGATGAAAACTTGCTGCCTGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACTTTCTGTTGTACCAGTaGAAAAGAAGCCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHFLLYQ*KRSQFI
Trigger: GATGAACTGGCTTCTTTTCAACTGGTACAACAGAAA...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp TCCCTGCTCAATTCTTCAACACGGAGCTGGAGAGTGTATGCTGCTGACTTAACATGTTTGAGGTGTTTCTaGTATCCATCATCATGTAAG +
Preference number: 5 (lower is better)
Translates to: SLLNSSTRSWRVYAADLTCLRCF*YPSSCK
Trigger: CTTACATGATGATGGATACAAGAAACACCTCAAACA...TGTTAAGTCAGCAGCATACACTCTCCAGCTCCGTGTTGAAGAATTGAGCAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp AGCCTTGCTCTGGGTGAAAGAACACAAAAATCCAGCAAGTTTCTTAAAAGTGGAATGTTTACAGTGGGCTaGGGGAAATCCAAGACCTCT +
Preference number: 5 (lower is better)
Translates to: SLALGERTQKSSKFLKSGMFTVG*GKSKTS
Trigger: AGAGGTCTTGGATTTCCCCAAGCCCACTGTAAACAT...TCCACTTTTAAGAAACTTGCTGGATTTTTGTGTTCTTTCACCCAGAGCAAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp CTACGCTACTCAGTAACCAAGACAACAGGACACCTGAACTACAAAAGTACGCACAAAGGCTTTCTTTTCTaGGTCATACACAACACCAAA +
Preference number: 5 (lower is better)
Translates to: LRYSVTKTTGHLNYKSTHKGFLF*VIHNTK
Trigger: TTTGGTGTTGTGTATGACCAAGAAAAGAAAGCCTTT...GTGCGTACTTTTGTAGTTCAGGTGTCCTGTTGTCTTGGTTACTGAGTAGCGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS-3UTR CAA 90 bp AAGCCTGAACACCCGAGAGTTAACATACAGGTTCGGTTAAGATATAACAAGGGAGTCAGTTCTTTTGTGTaGGGCATAGTTTCTATAGGC +
Preference number: 5 (lower is better)
Translates to: KPEHPRVNIQVRLRYNKGVSSFV*GIVSIG
Trigger: GCCTATAGAAACTATGCCCAACACAAAAGAACTGAC...TCCCTTGTTATATCTTAACCGAACCTGTATGTTAACTCTCGGGTGTTCAGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 90 bp TCTCCAAAGACTCAGGCAGCAAGTTTTCATCATGGTCAAGAGAAATaGCCTCCTGAACTTTGGAAACAAAGTTTTCACACGTTATGTCAG +
Preference number: 5 (lower is better)
Translates to: SPKTQAASFHHGQEK*PPELWKQSFHTLCQ
Trigger: CTGACATAACGTGTGAAAACTTTGTTTCCAAAGTTCAGGAGGTCATTTCTCTTGACCATGATGAAAACTTGCTGCCTGAGTCTTTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 90 bp ATTTTACCAGGTAATGTGTTACTTCCTCCCCTGTTTCTGCATCCTTaGTGTGGGCCACTTCTAAGATACGATCAATTTCTATATAATCTG +
Preference number: 5 (lower is better)
Translates to: ILPGNVLLPPLFLHP*CGPLLRYDQFLYNL
Trigger: CAGATTATATAGAAATTGATCGTATCTTAGAAGTGGCCCACACCAAGGATGCAGAAACAGGGGAGGAAGTAACACATTACCTGGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS TCA 90 bp AACTCTTACTCTCTTCCTCAGAGTATTTGCCTGGGTAGTCTTGACTaGGGCAGGTTCCATCTTTCTCATAATCATCTTTATTCTCAAAAT +
Preference number: 5 (lower is better)
Translates to: NSYSLPQSICLGSLD*GRFHLSHNHLYSQN
Trigger: ATTTTGAGAATAAAGATGATTATGAGAAAGATGGAACCTGCCTCAGTCAAGACTACCCAGGCAAATACTCTGAGGAAGAGAGTAAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp AGCACTCAGCGCGGAGGTAGCGTCGGGCTCTGTCGCTaGGGCGTCTGGACCGTGTGGGCCTTTCGTCTGAGT +
Preference number: 6 (lower is better)
Translates to: STQRGGSVGLCR*GVWTVWAFRLS
Trigger: ACTCAGACGAAAGGCCCACACGGTCCAGACGCCTCAGCGACAGAGCCCGACGCTACCTCCGCGCTGAGTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS GCA 72 bp GTCCGCCAACTCCAAACATCTGGGGCACCGCGGCCATaGCTGGCAGCATCATGGGCAGCATGCTCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: VRQLQTSGAPRP*LAASWAACSGC
Trigger: ACACCCTGAGCATGCTGCCCATGATGCTGCCAGGCATGGCCGCGGTGCCCCAGATGTTTGGAGTTGGCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp CATCTTCTGGAGGCTCCTCAGCCTGCCAGGCCAGAGTaGAAGCCGAGAGTGCAGATGTGCGGCCAGCTCCCA +
Preference number: 6 (lower is better)
Translates to: HLLEAPQPARPE*KPRVQMCGQLP
Trigger: TGGGAGCTGGCCGCACATCTGCACTCTCGGCTTCCACTCTGGCCTGGCAGGCTGAGGAGCCTCCAGAAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CCA 72 bp CCCCTCCTCCCTGGCCTGTGCCACGTGTTCTCTCTCTaGGGACACAGTGGCACTGGACTCGGTGCAGTTCTG +
Preference number: 6 (lower is better)
Translates to: PLLPGLCHVFSL*GHSGTGLGAVL
Trigger: CAGAACTGCACCGAGTCCAGTGCCACTGTGTCCCCAGAGAGAGAACACGTGGCACAGGCCAGGGAGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp CGAGCAGTGAGGGCAGAGGAAACTGGCCAGGGTGATTaGTCTGGGTCGGAGCCATCCTGGGCTGCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: RAVRAEETGQGD*SGSEPSWAAWL
Trigger: CAGCCAGGCAGCCCAGGATGGCTCCGACCCAGACAAATCACCCTGGCCAGTTTCCTCTGCCCTCACTGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp CGCCTGAGTCGAGCAGTGAGGGCAGAGGAAACTGGCCAGGGTGATTaGTCTGGGTCGGAGCCATCCTGGGCTGCCTGGCTGTCATCCTTC +
Preference number: 6 (lower is better)
Translates to: RLSRAVRAEETGQGD*SGSEPSWAAWLSSF
Trigger: GAAGGATGACAGCCAGGCAGCCCAGGATGGCTCCGACCCAGACAAATCACCCTGGCCAGTTTCCTCTGCCCTCACTGCTCGACTCAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp CTCCTCAGCCTGCCAGGCCAGAGTGGAAGCCGAGAGTaGAGATGTGCGGCCAGCTCCCAGGACAGCAATTGT +
Preference number: 6 (lower is better)
Translates to: LLSLPGQSGSRE*RCAASSQDSNC
Trigger: ACAATTGCTGTCCTGGGAGCTGGCCGCACATCTGCACTCTCGGCTTCCACTCTGGCCTGGCAGGCTGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CCA 72 bp ATGGGTGTGTTGAGGAGTCCGCCAACTCCAAACATCTaGGGCACCGCGGCCATGCCTGGCAGCATCATGGGC +
Preference number: 6 (lower is better)
Translates to: MGVLRSPPTPNI*GTAAMPGSIMG
Trigger: GCCCATGATGCTGCCAGGCATGGCCGCGGTGCCCCAGATGTTTGGAGTTGGCGGACTCCTCAACACACCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp GTCTCAAGACCGACCATCTCTGAGTGTCTGGCCTGCTaGATGGCTGGCAGAGCCATGCCCATGCCAGGGGAA +
Preference number: 6 (lower is better)
Translates to: VSRPTISECLAC*MAGRAMPMPGE
Trigger: TTCCCCTGGCATGGGCATGGCTCTGCCAGCCATGCAGCAGGCCAGACACTCAGAGATGGTCGGTCTTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp AACCTCTTCACCCGTGGGCATGGTGGCAAAACCAGCTaGGAAGCCCACCAGCCCAGTGAGAGGAATGCCTGG +
Preference number: 6 (lower is better)
Translates to: NLFTRGHGGKTS*EAHQPSERNAW
Trigger: CCAGGCATTCCTCTCACTGGGCTGGTGGGCTTCCCAGCTGGTTTTGCCACCATGCCCACGGGTGAAGAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp TTGGTACCGGAGGCCTCCCGGTGCTTCCGGGGCTTCTaGACACCGTCTTTCTGCTTTGTCTCCTTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: LVPEASRCFRGF*TPSFCFVSLGS
Trigger: GGAGCCCAAGGAGACAAAGCAGAAAGACGGTGTCAAGAAGCCCCGGAAGCACCGGGAGGCCTCCGGTACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CAA 72 bp CAGGAGAGGTCTATAGCTGACTCCCCATGCCAGCCATaGAGGACAATGGGCGGACGCCCATGGGTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: QERSIADSPCQP*RTMGGRPWVAE
Trigger: CTCTGCCACCCATGGGCGTCCGCCCATTGTCCTCAATGGCTGGCATGGGGAGTCAGCTATAGACCTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp AAGCAGTGGTCGTGCAGGTGGTTGCCATGGGTGTGTTaGGGAGTCCGCCAACTCCAAACATCTGGGGCACCG +
Preference number: 6 (lower is better)
Translates to: KQWSCRWLPWVC*GVRQLQTSGAP
Trigger: CGGTGCCCCAGATGTTTGGAGTTGGCGGACTCCTCAACACACCCATGGCAACCACCTGCACGACCACTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp TCCCGGTGCTTCCGGGGCTTCTTGACACCGTCTTTCTaGTTTGTCTCCTTGGGCTCCTTGGCTCTCTTCGGC +
Preference number: 6 (lower is better)
Translates to: SRCFRGFLTPSF*FVSLGSLALFG
Trigger: GCCGAAGAGAGCCAAGGAGCCCAAGGAGACAAAGCAGAAAGACGGTGTCAAGAAGCCCCGGAAGCACCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS GCA 72 bp TCTGAGGAGCAGGAGAGGTCTATAGCTGACTCCCCATaGCAGCCATTGAGGACAATGGGCGGACGCCCATGG +
Preference number: 6 (lower is better)
Translates to: SEEQERSIADSP*QPLRTMGGRPW
Trigger: CCATGGGCGTCCGCCCATTGTCCTCAATGGCTGGCATGGGGAGTCAGCTATAGACCTCTCCTGCTCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp TTTCTGCGCTTTACTTGCCGTCCTGAGCGCCGTTTCTaGCTGTCTGCAGACTCACTGGGCTCCTCAGGGCTC +
Preference number: 6 (lower is better)
Translates to: FLRFTCRPERRF*LSADSLGSSGL
Trigger: GAGCCCTGAGGAGCCCAGTGAGTCTGCAGACAGCCAGAAACGGCGCTCAGGACGGCAAGTAAAGCGCAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CCA 72 bp ACTGGTGTGGGCAGTGCACCTGAGGGCTCATACTGGTaGCTGCAGGGCCACTTCCCCTTTAACACCACATGG +
Preference number: 6 (lower is better)
Translates to: TGVGSAPEGSYW*LQGHFPFNTTW
Trigger: CCATGTGGTGTTAAAGGGGAAGTGGCCCTGCAGCCACCAGTATGAGCCCTCAGGTGCACTGCCCACACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp CTGGCTCTGAGAGGCTGCTTCGAGAACCTGCACTGCTaGATAACACTGGTGTGGGCAGTGCACCTGAGGGCT +
Preference number: 6 (lower is better)
Translates to: LALRGCFENLHC*ITLVWAVHLRA
Trigger: AGCCCTCAGGTGCACTGCCCACACCAGTGTTATCCAGCAGTGCAGGTTCTCGAAGCAGCCTCTCAGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp TCTTCTGGGTCTCAAGACCGACCATCTCTGAGTGTCTaGCCTGCTGCATGGCTGGCAGAGCCATGCCCATGC +
Preference number: 6 (lower is better)
Translates to: SSGSQDRPSLSV*PAAWLAEPCPC
Trigger: GCATGGGCATGGCTCTGCCAGCCATGCAGCAGGCCAGACACTCAGAGATGGTCGGTCTTGAGACCCAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp GTGCCACGTGTTCTCTCTCTGGGGACACAGTGGCACTaGACTCGGTGCAGTTCTGATCACTGCCTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: VPRVLSLGTQWH*TRCSSDHCLAP
Trigger: AGGAGCCAGGCAGTGATCAGAACTGCACCGAGTCCAGTGCCACTGTGTCCCCAGAGAGAGAACACGTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp TGGCCTGTGCCACGTGTTCTCTCTCTGGGGACACAGTaGCACTGGACTCGGTGCAGTTCTGATCACTGCCTG +
Preference number: 6 (lower is better)
Translates to: WPVPRVLSLGTQ*HWTRCSSDHCL
Trigger: CAGGCAGTGATCAGAACTGCACCGAGTCCAGTGCCACTGTGTCCCCAGAGAGAGAACACGTGGCACAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp GAAGCAGTGGTCGTGCAGGTGGTTGCCATGGGTGTGTaGAGGAGTCCGCCAACTCCAAACATCTGGGGCACC +
Preference number: 6 (lower is better)
Translates to: EAVVVQVVAMGV*RSPPTPNIWGT
Trigger: GGTGCCCCAGATGTTTGGAGTTGGCGGACTCCTCAACACACCCATGGCAACCACCTGCACGACCACTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp TTACCTTCCTTGGTACCGGAGGCCTCCCGGTGCTTCCGGGGCTTCTaGACACCGTCTTTCTGCTTTGTCTCCTTGGGCTCCTTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: LPSLVPEASRCFRGF*TPSFCFVSLGSLAL
Trigger: GAGAGCCAAGGAGCCCAAGGAGACAAAGCAGAAAGACGGTGTCAAGAAGCCCCGGAAGCACCGGGAGGCCTCCGGTACCAAGGAAGGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS TCA 72 bp AGGCTGGGCCTGCAAAGCTGGAGGCGCTCATGTAGTTaGGGACACATGAGCACCTGCTCACGGACTTTCCTC +
Preference number: 6 (lower is better)
Translates to: RLGLQSWRRSCS*GHMSTCSRTFL
Trigger: GAGGAAAGTCCGTGAGCAGGTGCTCATGTGTCCTCAACTACATGAGCGCCTCCAGCTTTGCAGGCCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp GTGTGGGCAGTGCACCTGAGGGCTCATACTGGTGGCTaGAGGGCCACTTCCCCTTTAACACCACATGGCAAA +
Preference number: 6 (lower is better)
Translates to: VWAVHLRAHTGG*RATSPLTPHGK
Trigger: TTTGCCATGTGGTGTTAAAGGGGAAGTGGCCCTGCAGCCACCAGTATGAGCCCTCAGGTGCACTGCCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp CTTCTGGCTCTGAGAGGCTGCTTCGAGAACCTGCACTaGTGGATAACACTGGTGTGGGCAGTGCACCTGAGG +
Preference number: 6 (lower is better)
Translates to: LLALRGCFENLH*WITLVWAVHLR
Trigger: CCTCAGGTGCACTGCCCACACCAGTGTTATCCAGCAGTGCAGGTTCTCGAAGCAGCCTCTCAGAGCCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp ATCTGGGCTGCCAGTGCTGCACCATTGCTGAAGCCGTaGTCTGTTGCTTCTGGCTCTGAGAGGCTGCTTCGA +
Preference number: 6 (lower is better)
Translates to: IWAASAAPLLKP*SVASGSERLLR
Trigger: TCGAAGCAGCCTCTCAGAGCCAGAAGCAACAGAGCACGGCTTCAGCAATGGTGCAGCACTGGCAGCCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp AACACTGGTGTGGGCAGTGCACCTGAGGGCTCATACTaGTGGCTGCAGGGCCACTTCCCCTTTAACACCACA +
Preference number: 6 (lower is better)
Translates to: NTGVGSAPEGSY*WLQGHFPFNTT
Trigger: TGTGGTGTTAAAGGGGAAGTGGCCCTGCAGCCACCAGTATGAGCCCTCAGGTGCACTGCCCACACCAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp TGCTTCGAGAACCTGCACTGCTGGATAACACTGGTGTaGGCAGTGCACCTGAGGGCTCATACTGGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: CFENLHCWITLV*AVHLRAHTGGC
Trigger: GCAGCCACCAGTATGAGCCCTCAGGTGCACTGCCCACACCAGTGTTATCCAGCAGTGCAGGTTCTCGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp CCATGCCAGCCATTGAGGACAATGGGCGGACGCCCATaGGTGGCAGAGTATTCTTCTAGGCTCCGAGCTTTG +
Preference number: 6 (lower is better)
Translates to: PCQPLRTMGGRP*VAEYSSRLRAL
Trigger: CAAAGCTCGGAGCCTAGAAGAATACTCTGCCACCCATGGGCGTCCGCCCATTGTCCTCAATGGCTGGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp CGGGGCTTCTTGACACCGTCTTTCTGCTTTGTCTCCTTGGGCTCCTaGGCTCTCTTCGGCTCCTTGGCCCTTCTGGGTTCTTTTGGCTCT +
Preference number: 6 (lower is better)
Translates to: RGFLTPSFCFVSLGS*ALFGSLALLGSFGS
Trigger: AGAGCCAAAAGAACCCAGAAGGGCCAAGGAGCCGAAGAGAGCCAAGGAGCCCAAGGAGACAAAGCAGAAAGACGGTGTCAAGAAGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CAA 90 bp GCTAAGAAGCTCTCCTTCTGGATCTGGGCTGCCAGTGCTGCACCATaGCTGAAGCCGTGCTCTGTTGCTTCTGGCTCTGAGAGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: AKKLSFWIWAASAAP*LKPCSVASGSERLL
Trigger: AAGCAGCCTCTCAGAGCCAGAAGCAACAGAGCACGGCTTCAGCAATGGTGCAGCACTGGCAGCCCAGATCCAGAAGGAGAGCTTCTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp TCTGAGGAGCAGGAGAGGTCTATAGCTGACTCCCCATGCCAGCCATaGAGGACAATGGGCGGACGCCCATGGGTGGCAGAGTATTCTTCT +
Preference number: 6 (lower is better)
Translates to: SEEQERSIADSPCQP*RTMGGRPWVAEYSS
Trigger: AGAAGAATACTCTGCCACCCATGGGCGTCCGCCCATTGTCCTCAATGGCTGGCATGGGGAGTCAGCTATAGACCTCTCCTGCTCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp CCTCTCCGCCTTCTCATGGCAGCATCATCCCTCCTGAGGCTTCCGTaGACAATCTGCCCAGTCACTGGGTGGATTAGACCAGCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: PLRLLMAASSLLRLP*TICPVTGWIRPACR
Trigger: TCTGCAAGCTGGTCTAATCCACCCAGTGACTGGGCAGATTGTCAACGGAAGCCTCAGGAGGGATGATGCTGCCATGAGAAGGCGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp TCTGGGGACACAGTGGCACTGGACTCGGTGCAGTTCTaGTCACTGCCTGGCTCCTTTTCACACACAGACGCA +
Preference number: 6 (lower is better)
Translates to: SGDTVALDSVQF*SLPGSFSHTDA
Trigger: TGCGTCTGTGTGTGAAAAGGAGCCAGGCAGTGATCAGAACTGCACCGAGTCCAGTGCCACTGTGTCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp GTGAATACTGGGGCTAAGAAGCTCTCCTTCTGGATCTaGGCTGCCAGTGCTGCACCATTGCTGAAGCCGTGC +
Preference number: 6 (lower is better)
Translates to: VNTGAKKLSFWI*AASAAPLLKPC
Trigger: GCACGGCTTCAGCAATGGTGCAGCACTGGCAGCCCAGATCCAGAAGGAGAGCTTCTTAGCCCCAGTATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp TTGCTTTCTGGGAGAAACCCCCTCAGTCCTGGCTCCTaGGGGACAGCAGGAACCCTCTCTTCTCCACCTAGA +
Preference number: 6 (lower is better)
Translates to: LLSGRNPLSPGS*GTAGTLSSPPR
Trigger: TCTAGGTGGAGAAGAGAGGGTTCCTGCTGTCCCCAAGGAGCCAGGACTGAGGGGGTTTCTCCCAGAAAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp TGTCTGCAGACTCACTGGGCTCCTCAGGGCTCTGCAGAGATGGGTTaGGAAGACTGTGGTCCAGCTCTAAACTCTCCACGGTGGTTTCGT +
Preference number: 6 (lower is better)
Translates to: CLQTHWAPQGSAEMG*EDCGPALNSPRWFR
Trigger: ACGAAACCACCGTGGAGAGTTTAGAGCTGGACCACAGTCTTCCAAACCCATCTCTGCAGAGCCCTGAGGAGCCCAGTGAGTCTGCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CAA 90 bp CTCTGTGGTCCAGCAGTCTTGCTCACCACCTCCAGCCTTCCTTTCTaGGCTTCATCTTGGTGGAAGCTGAGGTTCTTCCCCCTTGGGATG +
Preference number: 6 (lower is better)
Translates to: LCGPAVLLTTSSLPF*ASSWWKLRFFPLGM
Trigger: CATCCCAAGGGGGAAGAACCTCAGCTTCCACCAAGATGAAGCCAAGAAAGGAAGGCTGGAGGTGGTGAGCAAGACTGCTGGACCACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp CCATGTGCCCACCTTTCGATGTGTTTACAGTGGCACTaGTTGGCTGGGGGAGGAAAGACCCTCTGTGGTCCA +
Preference number: 6 (lower is better)
Translates to: PCAHLSMCLQWH*LAGGGKTLCGP
Trigger: TGGACCACAGAGGGTCTTTCCTCCCCCAGCCAATCAGTGCCACTGTAAACACATCGAAAGGTGGGCACATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp TTCTCTTTACCTTCCTTGGTACCGGAGGCCTCCCGGTaGTTCCGGGGCTTCTTGACACCGTCTTTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: FSLPSLVPEASR*FRGFLTPSFCF
Trigger: AAAGCAGAAAGACGGTGTCAAGAAGCCCCGGAAGCACCGGGAGGCCTCCGGTACCAAGGAAGGTAAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS GCA 72 bp ACACAGTGGCACTGGACTCGGTGCAGTTCTGATCACTaGCTGGCTCCTTTTCACACACAGACGCAGGCTCTT +
Preference number: 6 (lower is better)
Translates to: TQWHWTRCSSDH*LAPFHTQTQAL
Trigger: AAGAGCCTGCGTCTGTGTGTGAAAAGGAGCCAGGCAGTGATCAGAACTGCACCGAGTCCAGTGCCACTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp GTTCTCTCTCTGGGGACACAGTGGCACTGGACTCGGTaGAGTTCTGATCACTGCCTGGCTCCTTTTCACACA +
Preference number: 6 (lower is better)
Translates to: VLSLGTQWHWTR*SSDHCLAPFHT
Trigger: TGTGTGAAAAGGAGCCAGGCAGTGATCAGAACTGCACCGAGTCCAGTGCCACTGTGTCCCCAGAGAGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp CCAGCAGTCTTGCTCACCACCTCCAGCCTTCCTTTCTaGGCTTCATCTTGGTGGAAGCTGAGGTTCTTCCCC +
Preference number: 6 (lower is better)
Translates to: PAVLLTTSSLPF*ASSWWKLRFFP
Trigger: GGGGAAGAACCTCAGCTTCCACCAAGATGAAGCCAAGAAAGGAAGGCTGGAGGTGGTGAGCAAGACTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp GTCCTCATTGTATTTTCTGCGCTTTACTTGCCGTCCTaGGCGCCGTTTCTGGCTGTCTGCAGACTCACTGGG +
Preference number: 6 (lower is better)
Translates to: VLIVFSALYLPS*APFLAVCRLTG
Trigger: CCCAGTGAGTCTGCAGACAGCCAGAAACGGCGCTCAGGACGGCAAGTAAAGCGCAGAAAATACAATGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS GCA 72 bp ATAGATGCTGGCATCAGGGGGACCATCATCTTTCCATaGGGGGAGACGACACACATTCCGACACATGGCTAC +
Preference number: 6 (lower is better)
Translates to: IDAGIRGTIIFP*GETTHIPTHGY
Trigger: GTAGCCATGTGTCGGAATGTGTGTCGTCTCCCCGCATGGAAAGATGATGGTCCCCCTGATGCCAGCATCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp GCACTTCCTGTGCCTCTTCCCCAAGGTCTCCTGCAATaGCTGATGCCGAACTCTTACTCTCTTCCTCAGAGT +
Preference number: 6 (lower is better)
Translates to: ALPVPLPQGLLQ*LMPNSYSLPQS
Trigger: ACTCTGAGGAAGAGAGTAAGAGTTCGGCATCAGGCATTGCAGGAGACCTTGGGGAAGAGGCACAGGAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp CACTTCAGGGTGTGTGGTGCTCAGGGTAGTCTGCCCTaGATCTTCATGGACTTCCAAGATTCCAGCCTGAAG +
Preference number: 6 (lower is better)
Translates to: HFRVCGAQGSLP*IFMDFQDSSLK
Trigger: CTTCAGGCTGGAATCTTGGAAGTCCATGAAGATGCAGGGCAGACTACCCTGAGCACCACACACCCTGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp TCTAAGGTAGGGGACACTAAGCATTTGGCCTCTCGGTaGCCTATGGTTTCAGGTCTCCGTCCTGTCTCACTG +
Preference number: 6 (lower is better)
Translates to: SKVGDTKHLASR*PMVSGLRPVSL
Trigger: CAGTGAGACAGGACGGAGACCTGAAACCATAGGCCACCGAGAGGCCAAATGCTTAGTGTCCCCTACCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp CCACCTTTCGATGTGTTTACAGTGGCACTGATTGGCTaGGGGAGGAAAGACCCTCTGTGGTCCAGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: PPFDVFTVALIG*GRKDPLWSSSL
Trigger: AAGACTGCTGGACCACAGAGGGTCTTTCCTCCCCCAGCCAATCAGTGCCACTGTAAACACATCGAAAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp TGGCTTTGCTTCTGTACAGGTCTGGCTGATAAGCCTTaGGTTTCTCTACTTCAGAGTCCTCGCTCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: WLCFCTGLADKP*VSLLQSPRSPG
Trigger: GCCTGGGGAGCGAGGACTCTGAAGTAGAGAAACCCAAGGCTTATCAGCCAGACCTGTACAGAAGCAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp ACAGTGGTCCCATTCCAGAAGGAGAGTCCGCTACAATaGCTGGAGCTTTTAGGAGTTCATTTCGAGGCCGCC +
Preference number: 6 (lower is better)
Translates to: TVVPFQKESPLQ*LELLGVHFEAA
Trigger: GGCGGCCTCGAAATGAACTCCTAAAAGCTCCAGCCATTGTAGCGGACTCTCCTTCTGGAATGGGACCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp CAGGTCCATTCCCGCAATCAGCCCATTCATGAACAGTaGTCCCATTCCAGAAGGAGAGTCCGCTACAATGGC +
Preference number: 6 (lower is better)
Translates to: QVHSRNQPIHEQ*SHSRRRVRYNG
Trigger: GCCATTGTAGCGGACTCTCCTTCTGGAATGGGACCACTGTTCATGAATGGGCTGATTGCGGGAATGGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp TCTTTCTGCTTTGTCTCCTTGGGCTCCTTGGCTCTCTTCGGCTCCTaGGCCCTTCTGGGTTCTTTTGGCTCTTTAGGTTCTCGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: SFCFVSLGSLALFGS*ALLGSFGSLGSRFL
Trigger: GAGGAAGCGAGAACCTAAAGAGCCAAAAGAACCCAGAAGGGCCAAGGAGCCGAAGAGAGCCAAGGAGCCCAAGGAGACAAAGCAGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS TCA 72 bp AAATCATCTCCATATCCTTCTCATTCAGGGGCCACTTaGATCGCCCGTGAGTCAGGATGTCCTTCCACCGGC +
Preference number: 6 (lower is better)
Translates to: KSSPYPSHSGAT*IARESGCPSTG
Trigger: GCCGGTGGAAGGACATCCTGACTCACGGGCGATTCAAGTGGCCCCTGAATGAGAAGGATATGGAGATGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS TCA 72 bp TGCAAAGCTGGAGGCGCTCATGTAGTTGAGGACACATaGGCACCTGCTCACGGACTTTCCTCAGCAGTTCAA +
Preference number: 6 (lower is better)
Translates to: CKAGGAHVVEDT*APAHGLSSAVQ
Trigger: TTGAACTGCTGAGGAAAGTCCGTGAGCAGGTGCTCATGTGTCCTCAACTACATGAGCGCCTCCAGCTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp ATCCTACCAGGTCCATTCCCGCAATCAGCCCATTCATaGACAGTGGTCCCATTCCAGAAGGAGAGTCCGCTA +
Preference number: 6 (lower is better)
Translates to: ILPGPFPQSAHS*TVVPFQKESPL
Trigger: TAGCGGACTCTCCTTCTGGAATGGGACCACTGTTCATGAATGGGCTGATTGCGGGAATGGACCTGGTAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp TGGTGGCAAAACCAGCTGGGAAGCCCACCAGCCCAGTaGGAGGAATGCCTGGAATATTTCTCACATTCTGCA +
Preference number: 6 (lower is better)
Translates to: WWQNQLGSPPAQ*EECLEYFSHSA
Trigger: TGCAGAATGTGAGAAATATTCCAGGCATTCCTCTCACTGGGCTGGTGGGCTTCCCAGCTGGTTTTGCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp TCCTCAGGGCTCTGCAGAGATGGGTTTGGAAGACTGTaGTCCAGCTCTAAACTCTCCACGGTGGTTTCGTTT +
Preference number: 6 (lower is better)
Translates to: SSGLCRDGFGRL*SSSKLSTVVSF
Trigger: AAACGAAACCACCGTGGAGAGTTTAGAGCTGGACCACAGTCTTCCAAACCCATCTCTGCAGAGCCCTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CAA 72 bp TTTGTCTCCTTGGGCTCCTTGGCTCTCTTCGGCTCCTaGGCCCTTCTGGGTTCTTTTGGCTCTTTAGGTTCT +
Preference number: 6 (lower is better)
Translates to: FVSLGSLALFGS*ALLGSFGSLGS
Trigger: AGAACCTAAAGAGCCAAAAGAACCCAGAAGGGCCAAGGAGCCGAAGAGAGCCAAGGAGCCCAAGGAGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CAA 90 bp AACCCACTTTCATGTCCTGTATCTAAGGTAGGGGACACTAAGCATTaGGCCTCTCGGTGGCCTATGGTTTCAGGTCTCCGTCCTGTCTCA +
Preference number: 6 (lower is better)
Translates to: NPLSCPVSKVGDTKH*ASRWPMVSGLRPVS
Trigger: TGAGACAGGACGGAGACCTGAAACCATAGGCCACCGAGAGGCCAAATGCTTAGTGTCCCCTACCTTAGATACAGGACATGAAAGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp GACAGTCTTGGATGCCAGGATCTTCTCAATTATGTTTaGATCATCTTCTGGAGGCTCCTCAGCCTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: DSLGCQDLLNYV*IIFWRLLSLPG
Trigger: GCCTGGCAGGCTGAGGAGCCTCCAGAAGATGATGCAAACATAATTGAGAAGATCCTGGCATCCAAGACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS GCA 72 bp TTTCTCTACTTCAGAGTCCTCGCTCCCCAGGCCATGTaGCCACCTTTCGATGTGTTTACAGTGGCACTGATT +
Preference number: 6 (lower is better)
Translates to: FLYFRVLAPQAM*PPFDVFTVALI
Trigger: AATCAGTGCCACTGTAAACACATCGAAAGGTGGGCACATGGCCTGGGGAGCGAGGACTCTGAAGTAGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp TTTCCTTTCTTCTTTCTCTCCACTGGGGTTGGTCCTTaGTCCCTGGCCTTCTTGGACTTTGTCCTGGATCCA +
Preference number: 6 (lower is better)
Translates to: FPFFFLSTGVGP*SLAFLDFVLDP
Trigger: TGGATCCAGGACAAAGTCCAAGAAGGCCAGGGAGCAAGGACCAACCCCAGTGGAGAGAAAGAAGAAAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134178.8
CDS CCA 72 bp ATCCATCATCATGTAAGACCACCTCAGGATTGCAGGTaGCCAGCCAGTCTGCATTCTTCAGTTCTGGGAGCA +
Preference number: 6 (lower is better)
Translates to: IHHHVRPPQDCR*PASLHSSVLGA
Trigger: TGCTCCCAGAACTGAAGAATGCAGACTGGCTGGCCACCTGCAATCCTGAGGTGGTCTTACATGATGATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp TGGGCTTGGGGAAATCCAAGACCTCTGGCTTTTCTGTaGCGCTTGCTACTATGGCTAAGGTTTCGTCCTCAT +
Preference number: 6 (lower is better)
Translates to: WAWGNPRPLAFL*RLLLWLRFRPH
Trigger: ATGAGGACGAAACCTTAGCCATAGTAGCAAGCGCCACAGAAAAGCCAGAGGTCTTGGATTTCCCCAAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp TCATGTCCTGTATCTAAGGTAGGGGACACTAAGCATTaGGCCTCTCGGTGGCCTATGGTTTCAGGTCTCCGT +
Preference number: 6 (lower is better)
Translates to: SCPVSKVGDTKH*ASRWPMVSGLR
Trigger: ACGGAGACCTGAAACCATAGGCCACCGAGAGGCCAAATGCTTAGTGTCCCCTACCTTAGATACAGGACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp CCAGGTTCTTTGCAGCGTGGTCTCCTCTGCTTGGGTTaGTCTGAAAAACTTGTCCCAAAGCCAGGAACATCC +
Preference number: 6 (lower is better)
Translates to: PGSLQRGLLCLG*SEKLVPKPGTS
Trigger: GGATGTTCCTGGCTTTGGGACAAGTTTTTCAGACAAACCCAAGCAGAGGAGACCACGCTGCAAAGAACCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp TTTTTCCTGGACTGTGTGTTGGTAGTTGGGGCCTCCTaGAAAGAATGCGGCTCTTGGCTGAGTCCTGTCTTA +
Preference number: 6 (lower is better)
Translates to: FFLDCVLVVGAS*KECGSWLSPVL
Trigger: TAAGACAGGACTCAGCCAAGAGCCGCATTCTTTTCAGGAGGCCCCAACTACCAACACACAGTCCAGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp GCCACAGGACTACTAGTAGTTATTGTGGGTTCTGACTaGTCAGAAAACGGACTAGGGCCAGGCTTGTCGTCT +
Preference number: 6 (lower is better)
Translates to: ATGLLVVIVGSD*SENGLGPGLSS
Trigger: AGACGACAAGCCTGGCCCTAGTCCGTTTTCTGATCAGTCAGAACCCACAATAACTACTAGTAGTCCTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp CCAAACTCCTCTAAGAAGGCAGTCTCTGAAGGGAACTaGGAGGGCTCCAGAAAGTTAAGCAAACTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: PNSSKKAVSEGN*EGSRKLSKLKS
Trigger: GCTCTTCAGTTTGCTTAACTTTCTGGAGCCCTCGCAGTTCCCTTCAGAGACTGCCTTCTTAGAGGAGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS GCA 72 bp CTTTCAGGAATGTCCGAAGTTCCATCTGTAACTCCCTaGTCTGCAGAAAGGGACTTCTCATCAGGCATGCCA +
Preference number: 6 (lower is better)
Translates to: LSGMSEVPSVTP*SAERDFSSGMP
Trigger: TGGCATGCCTGATGAGAAGTCCCTTTCTGCAGAGCAGGGAGTTACAGATGGAACTTCGGACATTCCTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp CCAGTGAGAGGAATGCCTGGAATATTTCTCACATTCTaGAATCCTACCAGGTCCATTCCCGCAATCAGCCCA +
Preference number: 6 (lower is better)
Translates to: PVRGMPGIFLTF*NPTRSIPAISP
Trigger: TGGGCTGATTGCGGGAATGGACCTGGTAGGATTGCAGAATGTGAGAAATATTCCAGGCATTCCTCTCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp TCTGCCAGGATCATCTCAAACGTTGTGATGACGACGTaGAACTTGAAGACTCCTGAAAGGGGGTTTCCCTGT +
Preference number: 6 (lower is better)
Translates to: SARIISNVVMTT*NLKTPERGFPC
Trigger: ACAGGGAAACCCCCTTTCAGGAGTCTTCAAGTTCCACGTCGTCATCACAACGTTTGAGATGATCCTGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CCA 72 bp CATAGTCAATGTCAGGCAGAAGCACATCCAGCTCTCTaGCAGGAGTTCCCTCGAATGCTTTATCAGCTGCTT +
Preference number: 6 (lower is better)
Translates to: HSQCQAEAHPAL*QEFPRMLYQLL
Trigger: AAGCAGCTGATAAAGCATTCGAGGGAACTCCTGCCAGAGAGCTGGATGTGCTTCTGCCTGACATTGACTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp GGTGATAGTATTTTTCCTGGACTGTGTGTTGGTAGTTaGGGCCTCCTGAAAAGAATGCGGCTCTTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: GDSIFPGLCVGS*GLLKRMRLLAE
Trigger: CTCAGCCAAGAGCCGCATTCTTTTCAGGAGGCCCCAACTACCAACACACAGTCCAGGAAAAATACTATCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp GTACCAGTTGAAAAGAAGCCAGTTCATCCCCTCGAGTaGGTACTCTCGCAGCCGGTTACTGTTCCTATACTC +
Preference number: 6 (lower is better)
Translates to: VPVEKKPVHPLE*VLSQPVTVPIL
Trigger: GAGTATAGGAACAGTAACCGGCTGCGAGAGTACCAACTCGAGGGGATGAACTGGCTTCTTTTCAACTGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CAA 72 bp CTGGGACTCGCCGTTTGCTTCTGGAGACCATCCAACTaGTCCTCAGCACTGTCTTCTTTATCTATGTTGCCT +
Preference number: 6 (lower is better)
Translates to: LGLAVCFWRPSN*SSALSSLSMLP
Trigger: AGGCAACATAGATAAAGAAGACAGTGCTGAGGACAAGTTGGATGGTCTCCAGAAGCAAACGGCGAGTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp ATCTTCATGGACTTCCAAGATTCCAGCCTGAAGTGTTaGCTCCTTCAGGAAGATGAGGTCCATCCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: IFMDFQDSSLKC*LLQEDEVHPSL
Trigger: GAGGGAGGGATGGACCTCATCTTCCTGAAGGAGCAAACACTTCAGGCTGGAATCTTGGAAGTCCATGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp CTTCCATCACTGGGACTCGCCGTTTGCTTCTGGAGACCATCCAACTaGTCCTCAGCACTGTCTTCTTTATCTATGTTGCCTCTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: LPSLGLAVCFWRPSN*SSALSSLSMLPLSG
Trigger: TCCTGAAAGAGGCAACATAGATAAAGAAGACAGTGCTGAGGACAAGTTGGATGGTCTCCAGAAGCAAACGGCGAGTCCCAGTGATGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp CTGCCCTGCATCTTCATGGACTTCCAAGATTCCAGCCTGAAGTGTTaGCTCCTTCAGGAAGATGAGGTCCATCCCTCCCTCAATATGTTT +
Preference number: 6 (lower is better)
Translates to: LPCIFMDFQDSSLKC*LLQEDEVHPSLNMF
Trigger: AAACATATTGAGGGAGGGATGGACCTCATCTTCCTGAAGGAGCAAACACTTCAGGCTGGAATCTTGGAAGTCCATGAAGATGCAGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp AGTCTGTGGGCCTCATCAATTATCACACAGCTCCAGTaGATTTTCTTCAGCTCTGGGCAATCTGCCAGGATC +
Preference number: 6 (lower is better)
Translates to: SLWASSIITQLQ*IFFSSGQSARI
Trigger: GATCCTGGCAGATTGCCCAGAGCTGAAGAAAATTCACTGGAGCTGTGTGATAATTGATGAGGCCCACAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS TCA 72 bp TGCAGAATTCCAGACAAGTCCATACCGAGAGCTCCTTaGAGTGAACTGATAGCACCAATCTTAGGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: CRIPDKSIPRAP*SELIAPILGVL
Trigger: CAGCACCCCTAAGATTGGTGCTATCAGTTCACTTCAAGGAGCTCTCGGTATGGACTTGTCTGGAATTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp GAAAGCCACAGGACTACTAGTAGTTATTGTGGGTTCTaGCTGATCAGAAAACGGACTAGGGCCAGGCTTGTC +
Preference number: 6 (lower is better)
Translates to: ESHRTTSSYCGF*LIRKRTRARLV
Trigger: GACAAGCCTGGCCCTAGTCCGTTTTCTGATCAGTCAGAACCCACAATAACTACTAGTAGTCCTGTGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp CTGGGCCTGTTTGTTCCTAAATCGCTTGATCTTCTGTaGGATGCGGGGATCCTTTTCCAGTTCTTCCATTGT +
Preference number: 6 (lower is better)
Translates to: LGLFVPKSLDLL*DAGILFQFFHC
Trigger: ACAATGGAAGAACTGGAAAAGGATCCCCGCATCGCACAGAAGATCAAGCGATTTAGGAACAAACAGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS GCA 72 bp TTACTGTTCCTATACTCACGGGATGTCTCCAGTTTCTaGCACGCATCAGAGGCAGGTCGTTCCACATGTTTA +
Preference number: 6 (lower is better)
Translates to: LLFLYSRDVSSF*HASEAGRSTCL
Trigger: TAAACATGTGGAACGACCTGCCTCTGATGCGTGGCAGAAACTGGAGACATCCCGTGAGTATAGGAACAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS GCA 72 bp AAGCACATCCAGCTCTCTGGCAGGAGTTCCCTCGAATaGTTTATCAGCTGCTTCTCCCAGTATTTCAGCTTT +
Preference number: 6 (lower is better)
Translates to: KHIQLSGRSSLE*FISCFSQYFSF
Trigger: AAAGCTGAAATACTGGGAGAAGCAGCTGATAAAGCATTCGAGGGAACTCCTGCCAGAGAGCTGGATGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp CAGCAGTCTCACCTTCCACTGTGGAATTATTGGCTTTaGTTCTGTACAGGTCTGGCTGATAAGCCTTGGGTT +
Preference number: 6 (lower is better)
Translates to: QQSHLPLWNYWL*FCTGLADKPWV
Trigger: AACCCAAGGCTTATCAGCCAGACCTGTACAGAAGCAAAGCCAATAATTCCACAGTGGAAGGTGAGACTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp TACCAGTTGAAAAGAAGCCAGTTCATCCCCTCGAGTTaGTACTCTCGCAGCCGGTTACTGTTCCTATACTCA +
Preference number: 6 (lower is better)
Translates to: YQLKRSQFIPSS*YSRSRLLFLYS
Trigger: TGAGTATAGGAACAGTAACCGGCTGCGAGAGTACCAACTCGAGGGGATGAACTGGCTTCTTTTCAACTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CCA 72 bp ATGGTGGAAAGTGGGGCAATGATGAGAAAGGGGCCGTaGATTCCTCTGACAAAGATTTCTGAAAGGAATGCG +
Preference number: 6 (lower is better)
Translates to: MVESGAMMRKGP*IPLTKISERNA
Trigger: CGCATTCCTTTCAGAAATCTTTGTCAGAGGAATCCACGGCCCCTTTCTCATCATTGCCCCACTTTCCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CCA 72 bp GAAGCTGAAGTAATTTCTGCCTCAATACCAGGAGGCTaGCAGCTCTCATTTCTGCTGGCTGAGATGGTGATA +
Preference number: 6 (lower is better)
Translates to: EAEVISASIPGG*QLSFLLAEMVI
Trigger: TATCACCATCTCAGCCAGCAGAAATGAGAGCTGCCAGCCTCCTGGTATTGAGGCAGAAATTACTTCAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp ATGTGCTTCATCTGGGCCTGTTTGTTCCTAAATCGCTaGATCTTCTGTGCGATGCGGGGATCCTTTTCCAGT +
Preference number: 6 (lower is better)
Translates to: MCFIWACLFLNR*IFCAMRGSFSS
Trigger: ACTGGAAAAGGATCCCCGCATCGCACAGAAGATCAAGCGATTTAGGAACAAACAGGCCCAGATGAAGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CAA 72 bp AGGATCATCTCAAACGTTGTGATGACGACGTGGAACTaGAAGACTCCTGAAAGGGGGTTTCCCTGTGCATCT +
Preference number: 6 (lower is better)
Translates to: RIISNVVMTTWN*KTPERGFPCAS
Trigger: AGATGCACAGGGAAACCCCCTTTCAGGAGTCTTCAAGTTCCACGTCGTCATCACAACGTTTGAGATGATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CAA 72 bp GTTGGTAGTTGGGGCCTCCTGAAAAGAATGCGGCTCTaGGCTGAGTCCTGTCTTACCATATATCATGTTCTC +
Preference number: 6 (lower is better)
Translates to: VGSWGLLKRMRL*AESCLTIYHVL
Trigger: GAGAACATGATATATGGTAAGACAGGACTCAGCCAAGAGCCGCATTCTTTTCAGGAGGCCCCAACTACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp CCACCTAGAGAGCTGATGTCTAATTTTCCAGGTTCTTaGCAGCGTGGTCTCCTCTGCTTGGGTTTGTCTGAA +
Preference number: 6 (lower is better)
Translates to: PPRELMSNFPGS*QRGLLCLGLSE
Trigger: TTCAGACAAACCCAAGCAGAGGAGACCACGCTGCAAAGAACCTGGAAAATTAGACATCAGCTCTCTAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp ACCAGAGCGTCTGTGTTTACATCATGGCCACTCAGCTaGTCCTCTGTAGATTTTTCAGTGGCTGAGGTACCA +
Preference number: 6 (lower is better)
Translates to: TRASVFTSWPLS*SSVDFSVAEVP
Trigger: TGGTACCTCAGCCACTGAAAAATCTACAGAGGACAAGCTGAGTGGCCATGATGTAAACACAGACGCTCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp AAGTCTTCATCAGGCTCAGTGAAAATGTGCTTCATCTGGGCCTGTTaGTTCCTAAATCGCTTGATCTTCTGTGCGATGCGGGGATCCTTT +
Preference number: 6 (lower is better)
Translates to: KSSSGSVKMCFIWAC*FLNRLIFCAMRGSF
Trigger: AAAGGATCCCCGCATCGCACAGAAGATCAAGCGATTTAGGAACAAACAGGCCCAGATGAAGCACATTTTCACTGAGCCTGATGAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CAA 90 bp CGGACTCTCAAAAGCACCTTATTGCAATGCTGTTTGAGGTGTTTCTaGTATCCATCATCATGTAAGACCACCTCAGGATTGCAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: RTLKSTLLQCCLRCF*YPSSCKTTSGLQVA
Trigger: GGCCACCTGCAATCCTGAGGTGGTCTTACATGATGATGGATACAAGAAACACCTCAAACAGCATTGCAATAAGGTGCTTTTGAGAGTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp CTCTCTTCTCCACCTAGAGAGCTGATGTCTAATTTTCCAGGTTCTTaGCAGCGTGGTCTCCTCTGCTTGGGTTTGTCTGAAAAACTTGTC +
Preference number: 6 (lower is better)
Translates to: LSSPPRELMSNFPGS*QRGLLCLGLSEKLV
Trigger: GACAAGTTTTTCAGACAAACCCAAGCAGAGGAGACCACGCTGCAAAGAACCTGGAAAATTAGACATCAGCTCTCTAGGTGGAGAAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp AAACGTTGTGATGACGACGTGGAACTTGAAGACTCCTaGAAGGGGGTTTCCCTGTGCATCTCTGTATACCAT +
Preference number: 6 (lower is better)
Translates to: KRCDDDVELEDS*KGVSLCISVYH
Trigger: ATGGTATACAGAGATGCACAGGGAAACCCCCTTTCAGGAGTCTTCAAGTTCCACGTCGTCATCACAACGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS TCA 72 bp AGGTCCATTTCTGAAGTTCTCCTGAACACTTCCTCCTaGACCCAGTATCCTTGGTTACCTGGGCCTAAGATT +
Preference number: 6 (lower is better)
Translates to: RSISEVLLNTSS*TQYPWLPGPKI
Trigger: AATCTTAGGCCCAGGTAACCAAGGATACTGGGTTCAGGAGGAAGTGTTCAGGAGAACTTCAGAAATGGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp ATGGAGGTTCTCCTGGGTGAACCTCCTGGACAGTCTTaGATGCCAGGATCTTCTCAATTATGTTTGCATCAT +
Preference number: 6 (lower is better)
Translates to: MEVLLGEPPGQS*MPGSSQLCLHH
Trigger: ATGATGCAAACATAATTGAGAAGATCCTGGCATCCAAGACTGTCCAGGAGGTTCACCCAGGAGAACCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CCA 72 bp TGGTGGCTGCAGGGCCACTTCCCCTTTAACACCACATaGCAAATATTATCTAGGCGGTTAATTATCACACGA +
Preference number: 6 (lower is better)
Translates to: WWLQGHFPFNTT*QILSRRLIITR
Trigger: TCGTGTGATAATTAACCGCCTAGATAATATTTGCCATGTGGTGTTAAAGGGGAAGTGGCCCTGCAGCCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp ATTTTCCAGGTTCTTTGCAGCGTGGTCTCCTCTGCTTaGGTTTGTCTGAAAAACTTGTCCCAAAGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: IFQVLCSVVSSA*VCLKNLSQSQE
Trigger: TTCCTGGCTTTGGGACAAGTTTTTCAGACAAACCCAAGCAGAGGAGACCACGCTGCAAAGAACCTGGAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp AATTTTCCAGGTTCTTTGCAGCGTGGTCTCCTCTGCTaGGGTTTGTCTGAAAAACTTGTCCCAAAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: NFPGSLQRGLLC*GLSEKLVPKPG
Trigger: TCCTGGCTTTGGGACAAGTTTTTCAGACAAACCCAAGCAGAGGAGACCACGCTGCAAAGAACCTGGAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp CTGATGTCTAATTTTCCAGGTTCTTTGCAGCGTGGTCTCCTCTGCTaGGGTTTGTCTGAAAAACTTGTCCCAAAGCCAGGAACATCCAAA +
Preference number: 6 (lower is better)
Translates to: LMSNFPGSLQRGLLC*GLSEKLVPKPGTSK
Trigger: TTTGGATGTTCCTGGCTTTGGGACAAGTTTTTCAGACAAACCCAAGCAGAGGAGACCACGCTGCAAAGAACCTGGAAAATTAGACATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp CCAGGCTCTCATCTGACTTCTTGTCCAAACGAGAAATaGTGCGGAACTGTGTCCAGTCAAAGGCTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: PGSHLTSCPNEK*CGTVSSQRLSF
Trigger: AAAAGAAAGCCTTTGACTGGACACAGTTCCGCATCATTTCTCGTTTGGACAAGAAGTCAGATGAGAGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS GCA 72 bp TGGCAGCTTCTTCAATGTTCTCTCCCTGATCAGGACTaGAATCGAATGGTGACGGAGATTTGTAGTCAAAGT +
Preference number: 6 (lower is better)
Translates to: WQLLQCSLPDQD*NRMVTEICSQS
Trigger: ACTTTGACTACAAATCTCCGTCACCATTCGATTGCAGTCCTGATCAGGGAGAGAACATTGAAGAAGCTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS GCA 72 bp TCTAATTTTCCAGGTTCTTTGCAGCGTGGTCTCCTCTaGTTGGGTTTGTCTGAAAAACTTGTCCCAAAGCCA +
Preference number: 6 (lower is better)
Translates to: SNFPGSLQRGLL*LGLSEKLVPKP
Trigger: TGGCTTTGGGACAAGTTTTTCAGACAAACCCAAGCAGAGGAGACCACGCTGCAAAGAACCTGGAAAATTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp AATGTTCTCTCCCTGATCAGGACTGCAATCGAATGGTaGCGGAGATTTGTAGTCAAAGTTAACAGAGGCATC +
Preference number: 6 (lower is better)
Translates to: NVLSLIRTAIEW*RRFVVKVNRGI
Trigger: GATGCCTCTGTTAACTTTGACTACAAATCTCCGTCACCATTCGATTGCAGTCCTGATCAGGGAGAGAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CCA 72 bp GGTAATGTGTTACTTCCTCCCCTGTTTCTGCATCCTTaGTGTGGGCCACTTCTAAGATACGATCAATTTCTA +
Preference number: 6 (lower is better)
Translates to: GNVLLPPLFLHP*CGPLLRYDQFL
Trigger: TAGAAATTGATCGTATCTTAGAAGTGGCCCACACCAAGGATGCAGAAACAGGGGAGGAAGTAACACATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CAA 72 bp CTTACTCTCTTCCTCAGAGTATTTGCCTGGGTAGTCTaGACTGAGGCAGGTTCCATCTTTCTCATAATCATC +
Preference number: 6 (lower is better)
Translates to: LTLFLRVFAWVV*TEAGSIFLIII
Trigger: GATGATTATGAGAAAGATGGAACCTGCCTCAGTCAAGACTACCCAGGCAAATACTCTGAGGAAGAGAGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp ACGAGAAATGATGCGGAACTGTGTCCAGTCAAAGGCTTTCTTTTCTaGGTCATACACAACACCAAAGGAAGACACTGTCCTATAGAAGTC +
Preference number: 6 (lower is better)
Translates to: TRNDAELCPVKGFLF*VIHNTKGRHCPIEV
Trigger: GACTTCTATAGGACAGTGTCTTCCTTTGGTGTTGTGTATGACCAAGAAAAGAAAGCCTTTGACTGGACACAGTTCCGCATCATTTCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 90 bp TGCCGAACTCTTACTCTCTTCCTCAGAGTATTTGCCTGGGTAGTCTaGACTGAGGCAGGTTCCATCTTTCTCATAATCATCTTTATTCTC +
Preference number: 6 (lower is better)
Translates to: CRTLTLFLRVFAWVV*TEAGSIFLIIIFIL
Trigger: GAGAATAAAGATGATTATGAGAAAGATGGAACCTGCCTCAGTCAAGACTACCCAGGCAAATACTCTGAGGAAGAGAGTAAGAGTTCGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CCA 72 bp TTGGAAGACTGTGGTCCAGCTCTAAACTCTCCACGGTaGTTTCGTTTTTCCTTTTTCCTTTCTTCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: LEDCGPALNSPR*FRFSFFLSSFS
Trigger: AGAGAAAGAAGAAAGGAAAAAGGAAAAACGAAACCACCGTGGAGAGTTTAGAGCTGGACCACAGTCTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000039782.14
ENSMUST00000130265.2
ENSMUST00000134178.8
CDS CCA 72 bp AAGTCTTCATCAGGCTCAGTGAAAATGTGCTTCATCTaGGCCTGTTTGTTCCTAAATCGCTTGATCTTCTGT +
Preference number: 6 (lower is better)
Translates to: KSSSGSVKMCFI*ACLFLNRLIFC
Trigger: ACAGAAGATCAAGCGATTTAGGAACAAACAGGCCCAGATGAAGCACATTTTCACTGAGCCTGATGAAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS TCA 72 bp TCTCTTCCTCAGAGTATTTGCCTGGGTAGTCTTGACTaGGGCAGGTTCCATCTTTCTCATAATCATCTTTAT +
Preference number: 6 (lower is better)
Translates to: SLPQSICLGSLD*GRFHLSHNHLY
Trigger: ATAAAGATGATTATGAGAAAGATGGAACCTGCCTCAGTCAAGACTACCCAGGCAAATACTCTGAGGAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS CAA 72 bp AAAAGCACCTTATTGCAATGCTGTTTGAGGTGTTTCTaGTATCCATCATCATGTAAGACCACCTCAGGATTG +
Preference number: 6 (lower is better)
Translates to: KSTLLQCCLRCF*YPSSCKTTSGL
Trigger: CAATCCTGAGGTGGTCTTACATGATGATGGATACAAGAAACACCTCAAACAGCATTGCAATAAGGTGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039782.14
CDS TCA 72 bp TCCATCATAGTATTGATAAGATTGGGCATGTTGTGTTaGTTTGCACCTTTGGTCAGGAAGGAAAAGTTTTTC +
Preference number: 6 (lower is better)
Translates to: SIIVLIRLGMLC*FAPLVRKEKFF
Trigger: GAAAAACTTTTCCTTCCTGACCAAAGGTGCAAATCAACACAACATGCCCAATCTTATCAATACTATGATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8
CDS CAA 72 bp CTCCATCATAGTATTGATAAGATTGGGCATGTTGTGTaGATTTGCACCTTTGGTCAGGAAGGAAAAGTTTTT +
Preference number: 6 (lower is better)
Translates to: LHHSIDKIGHVV*ICTFGQEGKVF
Trigger: AAAAACTTTTCCTTCCTGACCAAAGGTGCAAATCAACACAACATGCCCAATCTTATCAATACTATGATGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039782.14
ENSMUST00000134178.8