Pregenerated sensors for CHD1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028089Ensembl transcript IDs: ENSMUST00000029730.5
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTaGATCACAGTTAACACTTCCAGAGCAACAAAATTAGAATTCAGG | + |
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Preference number: 1 (lower is better) Translates to: KGLPHIHCVFLYYRY*ITVNTSRATKLEFR Trigger: CCTGAATTCTAATTTTGTTGCTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACCTGGTTGCTGAAAACTaGACCCAATGCTGGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LPHIHCVFLYYRYWITVNLVAEN*TQCWAG Trigger: ACCAGCCCAGCATTGGGTCCAGTTTTCAGCAACCAG...GTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCAGAGCAAGAATCTAACTaGTTGCTGAAAACTGGACCC | + |
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Preference number: 2 (lower is better) Translates to: PKGFPIYIVCSCITGTGSEQESN*LLKTGP Trigger: GGGTCCAGTTTTCAGCAACCAGTTAGATTCTTGCTC...TGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| 3UTR-3UTR TCA 90 bp | AGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCCAGAGCAGAGAATATaGCCAAAGATAGCCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SQRASPYTLCVPVLQVLDPEQRI*PKIALF Trigger: AAACAAGGCTATCTTTGGTCATATTCTCTGCTCTGG...ATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTTTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACGATAGCCTTGTTTCCTaGAAACTAACAGTCAATCTG | + |
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Preference number: 2 (lower is better) Translates to: LPHIHCVFLYYRYWITVNDSLVS*KLTVNL Trigger: CAGATTGACTGTTAGTTTTCAGGAAACAAGGCTATC...GTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| 3UTR-3UTR CAA 90 bp | AGCAACAAAATTAGAATTCAGGAAAGACTAGCCCAGAAATTCCAGAGCAGAGAACAAGAATCTAACTGGTaGCTGAAAACTGGACCCAAT | + |
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Preference number: 3 (lower is better) Translates to: SNKIRIQERLAQKFQSREQESNW*LKTGPN Trigger: ATTGGGTCCAGTTTTCAGCAACCAGTTAGATTCTTG...TTCTCTGCTCTGGAATTTCTGGGCTAGTCTTTCCTGAATTCTAATTTTGTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| 3UTR CCA 72 bp | CCCCATATACATTGTGTGTTCCTGTATTACAGGTACTaGATCACAGTTAACACTTCCAGAGCAACAAAATTA | + |
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Preference number: 3 (lower is better) Translates to: PHIHCVFLYYRY*ITVNTSRATKL Trigger: TAATTTTGTTGCTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR TCA 90 bp | AACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTGAAGTCGGCCTCGGCTaGAGGTTTCTGGGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NIGNLKPKGFPIYIVCSCEVGLG*RFLGSW Trigger: CCAGGAGCCCAGAAACCTTCAGCCGAGGCCGACTTC...ACAGGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | AAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTCCTGCTGCTGCTGCTaGGGGCAGAGCATCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: KHRQSEAKGLPHIHCVFLSCCCC*GQSIRG Trigger: ACCCCTGATGCTCTGCCCGCAGCAGCAGCAGCAGGA...CAGGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | AACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTTCCTCCTCCTGCTGCTaGTGCTGCGGGCAGAGCATC | + |
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Preference number: 4 (lower is better) Translates to: NIGNLKPKGFPIYIVCSCSSSCC*CCGQSI Trigger: GATGCTCTGCCCGCAGCAGCAGCAGCAGGAGGAGGA...ACAGGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR TCA 90 bp | AAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGAGCCTGTCCAGCAGGTaGAGCTTCCCACTGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KGFPIYIVCSCITGTGSQSLSSR*SFPLAS Trigger: TGAGGCCAGTGGGAAGCTTCACCTGCTGGACAGGCT...CTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | TACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACACTTCCAGAGGCTTCCTCCTCCTGCTaGTGCTGCTGCGGGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: YIVCSCITGTGSQLTLPEASSSC*CCCGQS Trigger: GCTCTGCCCGCAGCAGCAGCAGCAGGAGGAGGAAGC...CTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR TCA 90 bp | CATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACACTTCCAGAGCATGTCTTAGGTCCTGCTaGAGGCGGGCTCTCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: HCVFLYYRYWITVNTSRACLRSC*RRALSS Trigger: GGAGGAGAGAGCCCGCCTTCAGCAGGACCTAAGACA...TGCTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | AAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGAGGAGAGCGATAGTCTaGCAGGTCTTCCCCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: KGFPIYIVCSCITGTGSQRRAIV*QVFPKP Trigger: GGGCTTGGGGAAGACCTGCCAGACTATCGCTCTCCT...CTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | CTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACTCCCGGAGGCTGTTCTaGATGGGCGTTCCGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LPHIHCVFLYYRYWITVNSRRLF*MGVPVS Trigger: GCTCACCGGAACGCCCATCCAGAACAGCCTCCGGGA...GTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | AAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGCAATTCGGTGAGCTCTaGCGGCCGCCTGCAAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: KHRQSEAKGLPHIHCVFLQFGEL*RPPASH Trigger: ATGACTTGCAGGCGGCCGCCAGAGCTCACCGAATTG...CAGGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | TACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACACTTCCAGAGTCGCCAGCCTGGGGGTaGGTGACGTCGCCACTAACA | + |
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Preference number: 4 (lower is better) Translates to: YIVCSCITGTGSQLTLPESPAWG*VTSPLT Trigger: TGTTAGTGGCGACGTCACCCACCCCCAGGCTGGCGA...CTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR TCA 90 bp | TTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACAGGGAACCAGTGGTGCTaGGGAGGAGGATGCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FPIYIVCSCITGTGSQLTGNQWC*GGGCRL Trigger: CAGCCTGCATCCTCCTCCTCAGCACCACTGGTTCCC...TGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | TACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACACTTCCAGAGCCGCTGTTAAGTTCATaGCCACTCCACCTGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: YIVCSCITGTGSQLTLPEPLLSS*PLHLPG Trigger: CCCGGGCAGGTGGAGTGGGCATGAACTTAACAGCGG...CTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | AAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGCAGACAGGACATTGGTaGGATCACGGTGCTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: KGFPIYIVCSCITGTGSQQTGHW*DHGAEP Trigger: TGGCTCAGCACCGTGATCGCACCAATGTCCTGTCTG...CTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | TTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACATCTTCTTCGCCAGCCTaGGGGTGGGTGACGTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: FPIYIVCSCITGTGSQLTSSSPA*GWVTSP Trigger: TGGCGACGTCACCCACCCCCAGGCTGGCGAAGAAGA...TGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR TCA 90 bp | AAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGGGATCTTCTTCCTTTTaGTGGGCCCTTCTGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: KHRQSEAKGLPHIHCVFLGSSSF*WALLQG Trigger: GCCTTGCAGAAGGGCCCATCAAAAGGAAGAAGATCC...CAGGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | AACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTACCATGTTGGTAAGCTaGAGTTTGGAGGCCGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: NIGNLKPKGFPIYIVCSCTMLVS*SLEAAF Trigger: GAAGGCGGCCTCCAAACTGCAGCTTACCAACATGGT...ACAGGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | CCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCATCGAACAGATACGGGTaGTCCACACACTTCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PKGFPIYIVCSCITGTGSSNRYG*STHFRS Trigger: GCTTCGGAAGTGTGTGGACCACCCGTATCTGTTCGA...TGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | AGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATGGTCTATATCCTCCATaGAGCTCCCCTCAGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: SQRASPYTLCVPVLQVLDGLYPP*SSPQRT Trigger: TGTCCTCTGAGGGGAGCTCCATGGAGGATATAGACC...ATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTTTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR TCA 90 bp | TCAAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCGTGCAGCTCGCTTGCTaGTTTGGACTCTTTCTCGAT | + |
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Preference number: 4 (lower is better) Translates to: SNIGNLKPKGFPIYIVCSVQLAC*FGLFLD Trigger: ATCGAGAAAGAGTCCAAATCAGCAAGCGAGCTGCAC...GGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | TTCAAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTTCCACCTGTTCTCTaGAGAAGAGGTCAGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FKHRQSEAKGLPHIHCVFLPPVL*RRGQAP Trigger: TGGAGCCTGACCTCTTCTGCAGAGAACAGGTGGAAG...GAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | TTCAAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGGCCTCAATCAGGTaGTCTCCAACTTCAAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: FKHRQSEAKGLPHIHCVFLASIR*SPTSKG Trigger: GCCCTTTGAAGTTGGAGAGCACCTGATTGAGGCCAG...GAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | AAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGAAGGCCAACAGATCTTaGCCCTTGTCTCGTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: KGFPIYIVCSCITGTGSQKANRS*PLSRDS Trigger: AGAGTCACGAGACAAGGGGCAAGATCTGTTGGCCTT...CTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | CTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACACGCCTCAGGAGAAATaGCTGCAAGAGCCTGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LPHIHCVFLYYRYWITVNTPQEK*LQEPVQ Trigger: CTGCACAGGCTCTTGCAGCCATTTCTCCTGAGGCGT...GTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | CATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACACTTCCAGAGCATCTTGGGGAGCTCTGTaGCTACCTGAGCTTTCACAC | + |
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Preference number: 4 (lower is better) Translates to: HCVFLYYRYWITVNTSRASWGAL*LPELSH Trigger: GTGTGAAAGCTCAGGTAGCCACAGAGCTCCCCAAGA...TGCTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | TACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACACTTCCAGAGGGTGAAGCTTCCCACTaGCCTCAATCAGGTGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: YIVCSCITGTGSQLTLPEGEASH*PQSGAL Trigger: GAGAGCACCTGATTGAGGCCAGTGGGAAGCTTCACC...CTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | AGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATTCAGTCTCTTCCTCTTaGCCGCTGCTTCCTGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SQRASPYTLCVPVLQVLDSVSSS*PLLPVF Trigger: AAAGACAGGAAGCAGCGGCCAAGAGGAAGAGACTGA...ATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTTTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | TTCAAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCAGGACTGGTAACCGTTaGATTCCCACCAGGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: FKHRQSEAKGLPHIHCVFRTGNR*IPTRPS Trigger: AGATGGCCTGGTGGGAATCCAACGGTTACCAGTCCT...GAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR TCA 90 bp | CATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACACTTCCAGAGCACTACACAGTGCACAATaGCAGCATCTTCTTCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: HCVFLYYRYWITVNTSRALHSAQ*QHLLRQ Trigger: CTGGCGAAGAAGATGCTGTCATTGTGCACTGTGTAG...TGCTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | AGCAACAAAATTAGAATTCAGGAAAGACTAGCCCAGAAATTCCAGAGCAGAGAAGCATCAGGGGTCCACTaGCCATCTTTGGTTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SNKIRIQERLAQKFQSREASGVH*PSLVSP Trigger: GGGAGAAACCAAAGATGGCCAGTGGACCCCTGATGC...TTCTCTGCTCTGGAATTTCTGGGCTAGTCTTTCCTGAATTCTAATTTTGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | AGCAACAAAATTAGAATTCAGGAAAGACTAGCCCAGAAATTCCAGAGCAGAGAATGCCAGACAGGACATTaGTGCGATCACGGTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SNKIRIQERLAQKFQSRECQTGH*CDHGAE Trigger: CTCAGCACCGTGATCGCACCAATGTCCTGTCTGGCA...TTCTCTGCTCTGGAATTTCTGGGCTAGTCTTTCCTGAATTCTAATTTTGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR TCA 90 bp | AACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTAGTCATTCTGAGGGTTaGAGTCGCTGTCGACAAAAA | + |
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Preference number: 4 (lower is better) Translates to: NIGNLKPKGFPIYIVCSCSHSEG*SRCRQK Trigger: TTTTTGTCGACAGCGACTTCAACCCTCAGAATGACT...ACAGGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR TCA 90 bp | AAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGCACCAGCTGCTCAAATaGCTTTCTGTCTTCCTTACT | + |
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Preference number: 4 (lower is better) Translates to: KHRQSEAKGLPHIHCVFLHQLLK*LSVFLT Trigger: AGTAAGGAAGACAGAAAGTCATTTGAGCAGCTGGTG...CAGGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | CTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACAGGTTTCTGGGCTCCTaGTGTGAAATGACCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPHIHCVFLYYRYWITVNRFLGS*CEMTSF Trigger: GAAGGAGGTCATTTCACACCAGGAGCCCAGAAACCT...GTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | TCAAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGGTTTCTCCCAGGATaGACTTCAGGTCTATATCCT | + |
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Preference number: 4 (lower is better) Translates to: SNIGNLKPKGFPIYIVCSWFLPG*TSGLYP Trigger: AGGATATAGACCTGAAGTCCATCCTGGGAGAAACCA...GGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | AGCAACAAAATTAGAATTCAGGAAAGACTAGCCCAGAAATTCCAGAGCAGAGAAGTCCTCCAGCTCCTCTaGGCTAAGGATCTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SNKIRIQERLAQKFQSREVLQLL*AKDLLP Trigger: AGGAAGAAGATCCTTAGCCCAGAGGAGCTGGAGGAC...TTCTCTGCTCTGGAATTTCTGGGCTAGTCTTTCCTGAATTCTAATTTTGTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR TCA 90 bp | CTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACACTGGACTAGCCAATTaGCTCCTTCCAGTTGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: LPHIHCVFLYYRYWITVNTGLAN*LLPVGK Trigger: CTTACCAACTGGAAGGAGTCAATTGGCTAGTCCAGT...GTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR TCA 90 bp | TTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACAGCTCCTGGTGTGAAATaGCCTCCTTCTATGACCATG | + |
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Preference number: 4 (lower is better) Translates to: FPIYIVCSCITGTGSQLTAPGVK*PPSMTM Trigger: CATGGTCATAGAAGGAGGTCATTTCACACCAGGAGC...TGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR TCA 90 bp | TTCAAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCTCTAGAAGGGTTTTCTaGAGATTCACCAGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: FKHRQSEAKGLPHIHCVFSRRVF*RFTSCS Trigger: TGAGCAGCTGGTGAATCTTCAGAAAACCCTTCTAGA...GAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR TCA 90 bp | AAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGCCAATTCGTGGAAGATaGACGCTTGCTTTCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KHRQSEAKGLPHIHCVFLPIRGR*TLAFFF Trigger: GAAAAAGAAAGCAAGCGTTCATCTTCCACGAATTGG...CAGGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | AGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATTGTCTCGTTCTCAAATaGATCCAGGTCTTTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQRASPYTLCVPVLQVLDCLVLK*IQVFHQ Trigger: CTGATGAAAGACCTGGATGCATTTGAGAACGAGACA...ATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTTTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | AGCAACAAAATTAGAATTCAGGAAAGACTAGCCCAGAAATTCCAGAGCAGAGAAAGGATGCAGCCATTCTaGCAATGGAAGCACTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SNKIRIQERLAQKFQSRERMQPF*QWKHWT Trigger: AGTCCAGTGCTTCCATTGCCAGAATGGCTGCATCCT...TTCTCTGCTCTGGAATTTCTGGGCTAGTCTTTCCTGAATTCTAATTTTGTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | TATTACAGGTACTGGATCACAGTTAACACTTCCAGAGCAACAAAATTAGAATTCCTTCCTCTTGGCCGCTaGTTCCTGTCTTTTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YYRYWITVNTSRATKLEFLPLGR*FLSFLP Trigger: CGGAAGAAAAGACAGGAAGCAGCGGCCAAGAGGAAG...GAATTCTAATTTTGTTGCTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | AGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATTGGAAGATGAACGCTTaGTTTCTTTTTCTTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQRASPYTLCVPVLQVLDWKMNA*FLFLCC Trigger: GCAGCAAAGAAAAAGAAAGCAAGCGTTCATCTTCCA...ATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTTTGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | TATTACAGGTACTGGATCACAGTTAACACTTCCAGAGCAACAAAATTAGAATTCTCTCATCTCCCAGGATaGAGCCATTCTGGCAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: YYRYWITVNTSRATKLEFSHLPG*SHSGNG Trigger: TCCATTGCCAGAATGGCTGCATCCTGGGAGATGAGA...GAATTCTAATTTTGTTGCTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | TATTACAGGTACTGGATCACAGTTAACACTTCCAGAGCAACAAAATTAGAATTCCAGCCATTCTGGCAATaGAAGCACTGGACTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YYRYWITVNTSRATKLEFQPFWQ*KHWTSQ Trigger: TTGGCTAGTCCAGTGCTTCCATTGCCAGAATGGCTG...GAATTCTAATTTTGTTGCTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | TTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACATGCGTCAGGATGTTCTaGAGTTTGACTTTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPIYIVCSCITGTGSQLTCVRMF*SLTFLA Trigger: AGCCAAGAAAGTCAAACTCCAGAACATCCTGACGCA...TGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | TATTACAGGTACTGGATCACAGTTAACACTTCCAGAGCAACAAAATTAGAATTCTCCACTGGCCATCTTTaGTTTCTCCCAGGATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: YYRYWITVNTSRATKLEFSTGHL*FLPGWT Trigger: AGTCCATCCTGGGAGAAACCAAAGATGGCCAGTGGA...GAATTCTAATTTTGTTGCTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | TCAAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCGGTTTTCATAAGACCTaGATTCCAATTCACTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNIGNLKPKGFPIYIVCSGFHKT*IPIHFL Trigger: AAGGAAGTGAATTGGAATCCAGGTCTTATGAAAACC...GGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | TTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACAAGCATGTCCAATTCGTaGAAGATGAACGCTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPIYIVCSCITGTGSQLTSMSNS*KMNACF Trigger: AAAGCAAGCGTTCATCTTCCACGAATTGGACATGCT...TGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR GCA 90 bp | TTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACAGAATCATCTACACAGTaGACAATGACAGCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPIYIVCSCITGTGSQLTESSTQ*TMTASS Trigger: AGAAGATGCTGTCATTGTGCACTGTGTAGATGATTC...TGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CCA 90 bp | TATTACAGGTACTGGATCACAGTTAACACTTCCAGAGCAACAAAATTAGAATTCGGAGAAAAACAAAAATaGGCTGGTTTCCAAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YYRYWITVNTSRATKLEFGEKQK*AGFQSS Trigger: AGAACTTTGGAAACCAGCCCATTTTTGTTTTTCTCC...GAATTCTAATTTTGTTGCTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS GCA 90 bp | CGTAGACGAATCCCAGTCAAGCCCCACTGCTGTAAGTCCGGTTCCTaGACCCGCGTCCGAAGCGGCTCCGGCCCGTGTTCGGCCGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRRIPVKPHCCKSGS*TRVRSGSGPCSAGS Trigger: GCTGCCGGCCGAACACGGGCCGGAGCCGCTTCGGACGCGGGTGCAGGAACCGGACTTACAGCAGTGGGGCTTGACTGGGATTCGTCTACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 90 bp | GGAGGGAGTAGAGCTCCCGGAGGCTGTTCTGGATGGGCGTTCCGGTaGGCAGGAGACGGAAGACCGCTGAGAACTCTGAAAGTGTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGSRAPGGCSGWAFR*AGDGRPLRTLKVSC Trigger: ACAGGACACTTTCAGAGTTCTCAGCGGTCTTCCGTCTCCTGCTCACCGGAACGCCCATCCAGAACAGCCTCCGGGAGCTCTACTCCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 90 bp | CTGCTGCTGCTGCGGGCAGAGCATCAGGGGTCCACTGGCCATCTTTaGTTTCTCCCAGGATGGACTTCAGGTCTATATCCTCCATGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLRAEHQGSTGHL*FLPGWTSGLYPPWS Trigger: GCTCCATGGAGGATATAGACCTGAAGTCCATCCTGGGAGAAACCAAAGATGGCCAGTGGACCCCTGATGCTCTGCCCGCAGCAGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 90 bp | TGGGCTAAGGATCTTCTTCCTTTTGATGGGCCCTTCTGCAAGGCCTaGGATAAGAACGCTGCCTTTGTTCCGGAGGGTCCGGCCCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: WAKDLLPFDGPFCKA*DKNAAFVPEGPAPM Trigger: CATGGGGGCCGGACCCTCCGGAACAAAGGCAGCGTTCTTATCCCAGGCCTTGCAGAAGGGCCCATCAAAAGGAAGAAGATCCTTAGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 90 bp | CAAGCTCGCTGTCCTCCGAGGACAGGCAGAAGGACTGGTAACCGTTaGATTCCCACCAGGCCATCTTCTTCCTGTGTTCAGCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QARCPPRTGRRTGNR*IPTRPSSSCVQPPP Trigger: AGGAGGAGGCTGAACACAGGAAGAAGATGGCCTGGTGGGAATCCAACGGTTACCAGTCCTTCTGCCTGTCCTCGGAGGACAGCGAGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 90 bp | TGGTACACCACCACCTCTGTCTTCTTGGGGAGCTCTGTGGCTACCTaGGCTTTCACACGCCTCAGGAGAAATGGCTGCAAGAGCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WYTTTSVFLGSSVAT*AFTRLRRNGCKSLC Trigger: GCACAGGCTCTTGCAGCCATTTCTCCTGAGGCGTGTGAAAGCTCAGGTAGCCACAGAGCTCCCCAAGAAGACAGAGGTGGTGGTGTACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 90 bp | CGATGGCCCCCAGAATACAGAAACGCCAGCAGCCTGTCCAGCAGGTaGAGCTTCCCACTGGCCTCAATCAGGTGCTCTCCAACTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RWPPEYRNASSLSSR*SFPLASIRCSPTSK Trigger: CTTTGAAGTTGGAGAGCACCTGATTGAGGCCAGTGGGAAGCTTCACCTGCTGGACAGGCTGCTGGCGTTTCTGTATTCTGGGGGCCATCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 90 bp | GCTGCCATCTTAATGCCAGACAGGACATTGGTGCGATCACGGTGCTaGGCCACAACCAAGGCCAACAGATCTTGCCCCTTGTCTCGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AAILMPDRTLVRSRC*ATTKANRSCPLSRD Trigger: GTCACGAGACAAGGGGCAAGATCTGTTGGCCTTGGTTGTGGCTCAGCACCGTGATCGCACCAATGTCCTGTCTGGCATTAAGATGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 90 bp | GCAGAGCATCAGGGGTCCACTGGCCATCTTTGGTTTCTCCCAGGATaGACTTCAGGTCTATATCCTCCATGGAGCTCCCCTCAGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: AEHQGSTGHLWFLPG*TSGLYPPWSSPQRT Trigger: TGTCCTCTGAGGGGAGCTCCATGGAGGATATAGACCTGAAGTCCATCCTGGGAGAAACCAAAGATGGCCAGTGGACCCCTGATGCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 90 bp | CCTCCTCCTTCTCCTTCCTCTTCTCCTCCATCAGTCTCTTCCTCTTaGCCGCTGCTTCCTGTCTTTTCTTCCGTCTGTCCTCCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPPSPSSSPPSVSSS*PLLPVFSSVCPPAP Trigger: AGGAGCTGGAGGACAGACGGAAGAAAAGACAGGAAGCAGCGGCCAAGAGGAAGAGACTGATGGAGGAGAAGAGGAAGGAGAAGGAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 90 bp | TGGAAGTCGGCCTCGGCTGAAGGTTTCTGGGCTCCTGGTGTGAAATaGCCTCCTTCTATGACCATGTTGGTAAGCTGCAGTTTGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WKSASAEGFWAPGVK*PPSMTMLVSCSLEA Trigger: GGCCTCCAAACTGCAGCTTACCAACATGGTCATAGAAGGAGGTCATTTCACACCAGGAGCCCAGAAACCTTCAGCCGAGGCCGACTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS GCA 90 bp | TCTCGATGTCCTGGTAACGCTGAACGAAATCTTCCACCTGTTCTCTaGAGAAGAGGTCAGGCTCCACGACACAGAGGAGGGAGTAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRCPGNAERNLPPVL*RRGQAPRHRGGSRA Trigger: AGCTCTACTCCCTCCTCTGTGTCGTGGAGCCTGACCTCTTCTGCAGAGAACAGGTGGAAGATTTCGTTCAGCGTTACCAGGACATCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS GCA 90 bp | CTTTCATCAGGATGGCCTTGTAGTACTTTTTCTGCAGAGCGGACATaGCGTGGTACACCACCACCTCTGTCTTCTTGGGGAGCTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSGWPCSTFSAERT*RGTPPPLSSWGALW Trigger: CCACAGAGCTCCCCAAGAAGACAGAGGTGGTGGTGTACCACGGCATGTCCGCTCTGCAGAAAAAGTACTACAAGGCCATCCTGATGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS GCA 90 bp | TCCACACCATCGAACAGATACGGGTGGTCCACACACTTCCGAAGCTaGGTCAGGATGTTCTGGAGTTTGACTTTCTTGGCTGTCTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: STPSNRYGWSTHFRS*VRMFWSLTFLAVSF Trigger: GAACGAGACAGCCAAGAAAGTCAAACTCCAGAACATCCTGACGCAGCTTCGGAAGTGTGTGGACCACCCGTATCTGTTCGATGGTGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 90 bp | CCATGGAGCTCCCCTCAGAGGACAGCAGTTTATCCAAGCCGAATTTaGGAATCTCACTTAACTGGAAGTCGGCCTCGGCTGAAGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PWSSPQRTAVYPSRI*ESHLTGSRPRLKVS Trigger: AGAAACCTTCAGCCGAGGCCGACTTCCAGTTAAGTGAGATTCTCAAATTCGGCTTGGATAAACTGCTGTCCTCTGAGGGGAGCTCCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 90 bp | AGATACGGGTGGTCCACACACTTCCGAAGCTGCGTCAGGATGTTCTaGAGTTTGACTTTCTTGGCTGTCTCGTTCTCAAATGCATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RYGWSTHFRSCVRMF*SLTFLAVSFSNASR Trigger: CCTGGATGCATTTGAGAACGAGACAGCCAAGAAAGTCAAACTCCAGAACATCCTGACGCAGCTTCGGAAGTGTGTGGACCACCCGTATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 90 bp | GGTGGTCCACACACTTCCGAAGCTGCGTCAGGATGTTCTGGAGTTTaGCTTTCTTGGCTGTCTCGTTCTCAAATGCATCCAGGTCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GGPHTSEAASGCSGV*LSWLSRSQMHPGLS Trigger: TGAAAGACCTGGATGCATTTGAGAACGAGACAGCCAAGAAAGTCAAACTCCAGAACATCCTGACGCAGCTTCGGAAGTGTGTGGACCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 90 bp | GAGGACAGCAGTTTATCCAAGCCGAATTTGAGAATCTCACTTAACTaGAAGTCGGCCTCGGCTGAAGGTTTCTGGGCTCCTGGTGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EDSSLSKPNLRISLN*KSASAEGFWAPGVK Trigger: TTTCACACCAGGAGCCCAGAAACCTTCAGCCGAGGCCGACTTCCAGTTAAGTGAGATTCTCAAATTCGGCTTGGATAAACTGCTGTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 90 bp | GCTCGTATATTTTTCTTGGTTCAGCTGATCGTACTTCCAGAGCTGTaGATAAGCCACCTCTGCCCCAGCGGCCAGAATCATCTACACAGT | + |
|
Preference number: 5 (lower is better) Translates to: ARIFFLVQLIVLPEL*ISHLCPSGQNHLHS Trigger: ACTGTGTAGATGATTCTGGCCGCTGGGGCAGAGGTGGCTTATTCACAGCTCTGGAAGTACGATCAGCTGAACCAAGAAAAATATACGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 90 bp | TCTTGGCTGTCTCGTTCTCAAATGCATCCAGGTCTTTCATCAGGATaGCCTTGTAGTACTTTTTCTGCAGAGCGGACATGCCGTGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SWLSRSQMHPGLSSG*PCSTFSAERTCRGT Trigger: TGTACCACGGCATGTCCGCTCTGCAGAAAAAGTACTACAAGGCCATCCTGATGAAAGACCTGGATGCATTTGAGAACGAGACAGCCAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CAA 90 bp | TACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACACTTCCAGAGACCACCTCTGTCTTCTaGGGGAGCTCTGTGGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: YIVCSCITGTGSQLTLPETTSVF*GSSVAT Trigger: GGTAGCCACAGAGCTCCCCAAGAAGACAGAGGTGGT...CTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 90 bp | TCTGAAAGTGTCCTGTGCAGCAGGGAGCTCTGGTTTTTCAATCTGTaGGCTTCATCCACAGCAAGAACGCTCCAAGAGAAGGATTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SESVLCSRELWFFNL*ASSTARTLQEKDFR Trigger: TCTAAAATCCTTCTCTTGGAGCGTTCTTGCTGTGGATGAAGCTCACAGATTGAAAAACCAGAGCTCCCTGCTGCACAGGACACTTTCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CAA 90 bp | CTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACGTCCACTGGCCATCTTaGGTTTCTCCCAGGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPHIHCVFLYYRYWITVNVHWPS*VSPRMD Trigger: GTCCATCCTGGGAGAAACCAAAGATGGCCAGTGGAC...GTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CAA 90 bp | AACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTAGGATCTTCTTCCTTTaGATGGGCCCTTCTGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NIGNLKPKGFPIYIVCSCRIFFL*MGPSAR Trigger: CCTTGCAGAAGGGCCCATCAAAAGGAAGAAGATCCT...ACAGGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CAA 90 bp | AGCAACAAAATTAGAATTCAGGAAAGACTAGCCCAGAAATTCCAGAGCAGAGAACGGGCTCTCTCCTCCTaGTCACCTGTGTATGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SNKIRIQERLAQKFQSRERALSS*SPVYVT Trigger: TGTGACATACACAGGTGACAAGGAGGAGAGAGCCCG...TTCTCTGCTCTGGAATTTCTGGGCTAGTCTTTCCTGAATTCTAATTTTGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CAA 90 bp | CTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGTTAACGCCTGTGCAGCTCGCTaGCTGATTTGGACTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPHIHCVFLYYRYWITVNACAAR*LIWTLS Trigger: AGAAAGAGTCCAAATCAGCAAGCGAGCTGCACAGGC...GTTAACTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CAA 90 bp | AAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCACAGAGGATGTTCTGGAGTTaGACTTTCTTGGCTGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KGFPIYIVCSCITGTGSQRMFWS*TFLAVS Trigger: CGAGACAGCCAAGAAAGTCAAACTCCAGAACATCCT...CTGTGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CAA 90 bp | TCAAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCCAACAGATCTTGCCCCTaGTCTCGTGACTCTTTATCG | + |
|
Preference number: 5 (lower is better) Translates to: SNIGNLKPKGFPIYIVCSNRSCP*SRDSLS Trigger: CGATAAAGAGTCACGAGACAAGGGGCAAGATCTGTT...GGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS GCA 90 bp | CAGGATGTTCTGGAGTTTGACTTTCTTGGCTGTCTCGTTCTCAAATaGATCCAGGTCTTTCATCAGGATGGCCTTGTAGTACTTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDVLEFDFLGCLVLK*IQVFHQDGLVVLFL Trigger: CAGAAAAAGTACTACAAGGCCATCCTGATGAAAGACCTGGATGCATTTGAGAACGAGACAGCCAAGAAAGTCAAACTCCAGAACATCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CAA 90 bp | TTCAAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCTGGAGTTTGACTTTCTaGGCTGTCTCGTTCTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FKHRQSEAKGLPHIHCVFWSLTF*AVSFSN Trigger: ATTTGAGAACGAGACAGCCAAGAAAGTCAAACTCCA...GAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
||
| CDS-3UTR CAA 90 bp | CCAAAGGGCTTCCCCATATACATTGTGTGTTCCTGTATTACAGGTACTGGATCAGCTCGTATATTTTTCTaGGTTCAGCTGATCGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: PKGFPIYIVCSCITGTGSARIFF*VQLIVL Trigger: AAGTACGATCAGCTGAACCAAGAAAAATATACGAGC...TGATCCAGTACCTGTAATACAGGAACACACAATGTATATGGGGAAGCCCTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CAA 90 bp | TTCAAACATAGGCAATCTGAAGCCAAAGGGCTTCCCCATATACATTGTGTGTTCGTGGAAGATGAACGCTaGCTTTCTTTTTCTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FKHRQSEAKGLPHIHCVFVEDER*LSFSLL Trigger: CAGCAAAGAAAAAGAAAGCAAGCGTTCATCTTCCAC...GAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCCTATGTTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS-3UTR CAA 90 bp | TATTACAGGTACTGGATCACAGTTAACACTTCCAGAGCAACAAAATTAGAATTCCCTTCTATGACCATGTaGGTAAGCTGCAGTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YYRYWITVNTSRATKLEFPSMTM*VSCSLE Trigger: CTCCAAACTGCAGCTTACCAACATGGTCATAGAAGG...GAATTCTAATTTTGTTGCTCTGGAAGTGTTAACTGTGATCCAGTACCTGTAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS GCA 72 bp | ATCCCAGTCAAGCCCCACTGCTGTAAGTCCGGTTCCTaGACCCGCGTCCGAAGCGGCTCCGGCCCGTGTTCG | + |
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Preference number: 6 (lower is better) Translates to: IPVKPHCCKSGS*TRVRSGSGPCS Trigger: CGAACACGGGCCGGAGCCGCTTCGGACGCGGGTGCAGGAACCGGACTTACAGCAGTGGGGCTTGACTGGGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CAA 90 bp | GCTGCTGCTGCTGCGGGCAGAGCATCAGGGGTCCACTGGCCATCTTaGGTTTCTCCCAGGATGGACTTCAGGTCTATATCCTCCATGGAG | + |
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Preference number: 6 (lower is better) Translates to: AAAAAGRASGVHWPS*VSPRMDFRSISSME Trigger: CTCCATGGAGGATATAGACCTGAAGTCCATCCTGGGAGAAACCAAAGATGGCCAGTGGACCCCTGATGCTCTGCCCGCAGCAGCAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CAA 90 bp | CTTTTGATGGGCCCTTCTGCAAGGCCTGGGATAAGAACGCTGCCTTaGTTCCGGAGGGTCCGGCCCCCATGGCTTGTCTTCTCTAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LLMGPSARPGIRTLP*FRRVRPPWLVFSRR Trigger: CCTTCTAGAGAAGACAAGCCATGGGGGCCGGACCCTCCGGAACAAAGGCAGCGTTCTTATCCCAGGCCTTGCAGAAGGGCCCATCAAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 72 bp | ACGCCAGCAGCCTGTCCAGCAGGTGAAGCTTCCCACTaGCCTCAATCAGGTGCTCTCCAACTTCAAAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: TPAACPAGEASH*PQSGALQLQRA Trigger: AGCCCTTTGAAGTTGGAGAGCACCTGATTGAGGCCAGTGGGAAGCTTCACCTGCTGGACAGGCTGCTGGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 72 bp | CCAGAATACAGAAACGCCAGCAGCCTGTCCAGCAGGTaGAGCTTCCCACTGGCCTCAATCAGGTGCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PEYRNASSLSSR*SFPLASIRCSP Trigger: TGGAGAGCACCTGATTGAGGCCAGTGGGAAGCTTCACCTGCTGGACAGGCTGCTGGCGTTTCTGTATTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CAA 72 bp | GCTGCGGGCAGAGCATCAGGGGTCCACTGGCCATCTTaGGTTTCTCCCAGGATGGACTTCAGGTCTATATCC | + |
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Preference number: 6 (lower is better) Translates to: AAGRASGVHWPS*VSPRMDFRSIS Trigger: GGATATAGACCTGAAGTCCATCCTGGGAGAAACCAAAGATGGCCAGTGGACCCCTGATGCTCTGCCCGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 72 bp | ACCACCTCTGTCTTCTTGGGGAGCTCTGTGGCTACCTaGGCTTTCACACGCCTCAGGAGAAATGGCTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: TTSVFLGSSVAT*AFTRLRRNGCK Trigger: CTTGCAGCCATTTCTCCTGAGGCGTGTGAAAGCTCAGGTAGCCACAGAGCTCCCCAAGAAGACAGAGGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS GCA 72 bp | CCTGGTAACGCTGAACGAAATCTTCCACCTGTTCTCTaGAGAAGAGGTCAGGCTCCACGACACAGAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: PGNAERNLPPVL*RRGQAPRHRGG Trigger: CCCTCCTCTGTGTCGTGGAGCCTGACCTCTTCTGCAGAGAACAGGTGGAAGATTTCGTTCAGCGTTACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 72 bp | AAGGGCTCTGGTTCCACACCATCGAACAGATACGGGTaGTCCACACACTTCCGAAGCTGCGTCAGGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: KGSGSTPSNRYG*STHFRSCVRMF Trigger: GAACATCCTGACGCAGCTTCGGAAGTGTGTGGACCACCCGTATCTGTTCGATGGTGTGGAACCAGAGCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 72 bp | GGCCTCAATCAGGTGCTCTCCAACTTCAAAGGGCTCTaGTTCCACACCATCGAACAGATACGGGTGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: GLNQVLSNFKGL*FHTIEQIRVVH Trigger: GTGGACCACCCGTATCTGTTCGATGGTGTGGAACCAGAGCCCTTTGAAGTTGGAGAGCACCTGATTGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 72 bp | CAGGGGTCCACTGGCCATCTTTGGTTTCTCCCAGGATaGACTTCAGGTCTATATCCTCCATGGAGCTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: QGSTGHLWFLPG*TSGLYPPWSSP Trigger: AGGGGAGCTCCATGGAGGATATAGACCTGAAGTCCATCCTGGGAGAAACCAAAGATGGCCAGTGGACCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 72 bp | CTGCGGGCAGAGCATCAGGGGTCCACTGGCCATCTTTaGTTTCTCCCAGGATGGACTTCAGGTCTATATCCT | + |
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Preference number: 6 (lower is better) Translates to: LRAEHQGSTGHL*FLPGWTSGLYP Trigger: AGGATATAGACCTGAAGTCCATCCTGGGAGAAACCAAAGATGGCCAGTGGACCCCTGATGCTCTGCCCGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 72 bp | TGTCCTCCGAGGACAGGCAGAAGGACTGGTAACCGTTaGATTCCCACCAGGCCATCTTCTTCCTGTGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: CPPRTGRRTGNR*IPTRPSSSCVQ Trigger: CTGAACACAGGAAGAAGATGGCCTGGTGGGAATCCAACGGTTACCAGTCCTTCTGCCTGTCCTCGGAGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 72 bp | TTAATGCCAGACAGGACATTGGTGCGATCACGGTGCTaGGCCACAACCAAGGCCAACAGATCTTGCCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LMPDRTLVRSRC*ATTKANRSCPL Trigger: CAAGGGGCAAGATCTGTTGGCCTTGGTTGTGGCTCAGCACCGTGATCGCACCAATGTCCTGTCTGGCATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS GCA 72 bp | GGATGGCCTTGTAGTACTTTTTCTGCAGAGCGGACATaGCGTGGTACACCACCACCTCTGTCTTCTTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: GWPCSTFSAERT*RGTPPPLSSWG Trigger: TCCCCAAGAAGACAGAGGTGGTGGTGTACCACGGCATGTCCGCTCTGCAGAAAAAGTACTACAAGGCCATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 72 bp | GCCTCGGCTGAAGGTTTCTGGGCTCCTGGTGTGAAATaGCCTCCTTCTATGACCATGTTGGTAAGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: ASAEGFWAPGVK*PPSMTMLVSCS Trigger: ACTGCAGCTTACCAACATGGTCATAGAAGGAGGTCATTTCACACCAGGAGCCCAGAAACCTTCAGCCGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS GCA 72 bp | TTCACACGCCTCAGGAGAAATGGCTGCAAGAGCCTGTaGAGCTCGCTTGCTGATTTGGACTCTTTCTCGATG | + |
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Preference number: 6 (lower is better) Translates to: FTRLRRNGCKSL*SSLADLDSFSM Trigger: CATCGAGAAAGAGTCCAAATCAGCAAGCGAGCTGCACAGGCTCTTGCAGCCATTTCTCCTGAGGCGTGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 72 bp | ATGGCTGCAAGAGCCTGTGCAGCTCGCTTGCTGATTTaGACTCTTTCTCGATGTCCTGGTAACGCTGAACGA | + |
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Preference number: 6 (lower is better) Translates to: MAARACAARLLI*TLSRCPGNAER Trigger: TCGTTCAGCGTTACCAGGACATCGAGAAAGAGTCCAAATCAGCAAGCGAGCTGCACAGGCTCTTGCAGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CAA 90 bp | GGGTGGTCCACACACTTCCGAAGCTGCGTCAGGATGTTCTGGAGTTaGACTTTCTTGGCTGTCTCGTTCTCAAATGCATCCAGGTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GWSTHFRSCVRMFWS*TFLAVSFSNASRSF Trigger: GAAAGACCTGGATGCATTTGAGAACGAGACAGCCAAGAAAGTCAAACTCCAGAACATCCTGACGCAGCTTCGGAAGTGTGTGGACCACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CAA 90 bp | TCCATGGAGCTCCCCTCAGAGGACAGCAGTTTATCCAAGCCGAATTaGAGAATCTCACTTAACTGGAAGTCGGCCTCGGCTGAAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SMELPSEDSSLSKPN*RISLNWKSASAEGF Trigger: GAAACCTTCAGCCGAGGCCGACTTCCAGTTAAGTGAGATTCTCAAATTCGGCTTGGATAAACTGCTGTCCTCTGAGGGGAGCTCCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 72 bp | TCCCCTCAGAGGACAGCAGTTTATCCAAGCCGAATTTaGGAATCTCACTTAACTGGAAGTCGGCCTCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SPQRTAVYPSRI*ESHLTGSRPRL Trigger: CAGCCGAGGCCGACTTCCAGTTAAGTGAGATTCTCAAATTCGGCTTGGATAAACTGCTGTCCTCTGAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS GCA 72 bp | TCGAACAGATACGGGTGGTCCACACACTTCCGAAGCTaGGTCAGGATGTTCTGGAGTTTGACTTTCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SNRYGWSTHFRS*VRMFWSLTFLA Trigger: AGCCAAGAAAGTCAAACTCCAGAACATCCTGACGCAGCTTCGGAAGTGTGTGGACCACCCGTATCTGTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 72 bp | AGGAGGATGCAGGCTGTGAATGGCGGGCCTTACTTCTaGGAAAGTAGTATATGTAAGTTGGGATGCCTCGTG | + |
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Preference number: 6 (lower is better) Translates to: RRMQAVNGGPYF*ESSICKLGCLV Trigger: CACGAGGCATCCCAACTTACATATACTACTTTCCCAGAAGTAAGGCCCGCCATTCACAGCCTGCATCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CAA 72 bp | CTCCCCTCAGAGGACAGCAGTTTATCCAAGCCGAATTaGAGAATCTCACTTAACTGGAAGTCGGCCTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: LPSEDSSLSKPN*RISLNWKSASA Trigger: AGCCGAGGCCGACTTCCAGTTAAGTGAGATTCTCAAATTCGGCTTGGATAAACTGCTGTCCTCTGAGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 72 bp | AGCCATTCTGGCAATGGAAGCACTGGACTAGCCAATTaGCTCCTTCCAGTTGGTAAGAACGTAGACGAATCC | + |
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Preference number: 6 (lower is better) Translates to: SHSGNGSTGLAN*LLPVGKNVDES Trigger: GGATTCGTCTACGTTCTTACCAACTGGAAGGAGTCAATTGGCTAGTCCAGTGCTTCCATTGCCAGAATGGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS TCA 72 bp | CACACTTCCGAAGCTGCGTCAGGATGTTCTGGAGTTTaGCTTTCTTGGCTGTCTCGTTCTCAAATGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: HTSEAASGCSGV*LSWLSRSQMHP Trigger: TGGATGCATTTGAGAACGAGACAGCCAAGAAAGTCAAACTCCAGAACATCCTGACGCAGCTTCGGAAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 72 bp | TGGTCCACACACTTCCGAAGCTGCGTCAGGATGTTCTaGAGTTTGACTTTCTTGGCTGTCTCGTTCTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: WSTHFRSCVRMF*SLTFLAVSFSN Trigger: ATTTGAGAACGAGACAGCCAAGAAAGTCAAACTCCAGAACATCCTGACGCAGCTTCGGAAGTGTGTGGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 72 bp | AGTTTATCCAAGCCGAATTTGAGAATCTCACTTAACTaGAAGTCGGCCTCGGCTGAAGGTTTCTGGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SLSKPNLRISLN*KSASAEGFWAP Trigger: AGGAGCCCAGAAACCTTCAGCCGAGGCCGACTTCCAGTTAAGTGAGATTCTCAAATTCGGCTTGGATAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CAA 72 bp | ACACACTTCCGAAGCTGCGTCAGGATGTTCTGGAGTTaGACTTTCTTGGCTGTCTCGTTCTCAAATGCATCC | + |
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Preference number: 6 (lower is better) Translates to: THFRSCVRMFWS*TFLAVSFSNAS Trigger: GGATGCATTTGAGAACGAGACAGCCAAGAAAGTCAAACTCCAGAACATCCTGACGCAGCTTCGGAAGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CAA 90 bp | ACACACTTCCGAAGCTGCGTCAGGATGTTCTGGAGTTTGACTTTCTaGGCTGTCTCGTTCTCAAATGCATCCAGGTCTTTCATCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: THFRSCVRMFWSLTF*AVSFSNASRSFIRM Trigger: CATCCTGATGAAAGACCTGGATGCATTTGAGAACGAGACAGCCAAGAAAGTCAAACTCCAGAACATCCTGACGCAGCTTCGGAAGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 72 bp | TCTCGTTCTCAAATGCATCCAGGTCTTTCATCAGGATaGCCTTGTAGTACTTTTTCTGCAGAGCGGACATGC | + |
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Preference number: 6 (lower is better) Translates to: SRSQMHPGLSSG*PCSTFSAERTC Trigger: GCATGTCCGCTCTGCAGAAAAAGTACTACAAGGCCATCCTGATGAAAGACCTGGATGCATTTGAGAACGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS GCA 72 bp | CTGGAGTTTGACTTTCTTGGCTGTCTCGTTCTCAAATaGATCCAGGTCTTTCATCAGGATGGCCTTGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: LEFDFLGCLVLK*IQVFHQDGLVV Trigger: TACTACAAGGCCATCCTGATGAAAGACCTGGATGCATTTGAGAACGAGACAGCCAAGAAAGTCAAACTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 72 bp | TACCTTCAAACAAGTACATGTGGTTTTCATAAGACCTaGATTCCAATTCACTTCCTTCCTCTGGTTCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: YLQTSTCGFHKT*IPIHFLPLVLG Trigger: GCCTAGAACCAGAGGAAGGAAGTGAATTGGAATCCAGGTCTTATGAAAACCACATGTACTTGTTTGAAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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| CDS CCA 72 bp | ATACCAGTTAAAACCCTTTGTAGCATGTCCAATTCGTaGAAGATGAACGCTTGCTTTCTTTTTCTTTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: IPVKTLCSMSNS*KMNACFLFLCC Trigger: GCAGCAAAGAAAAAGAAAGCAAGCGTTCATCTTCCACGAATTGGACATGCTACAAAGGGTTTTAACTGGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029730.5 |
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