Pregenerated sensors for CHCHD6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030086Ensembl transcript IDs: ENSMUST00000032172.14, ENSMUST00000113550.6, ENSMUST00000204654.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTaGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGAAGGATGCT | + |
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Preference number: 1 (lower is better) Translates to: MGAQLETAGPGGHGL*SYDRSLLQGSRKDA Trigger: AGCATCCTTCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| 3UTR TCA 90 bp | ACCACCACCACTCTCTGCACTGGGCACTTTAACGTGTACAGAGGATaGAGGAGCAGTAGGCACAGGAGTGGTAGGTGCAGGGACAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: TTTTLCTGHFNVYRG*RSSRHRSGRCRDSG Trigger: CCCACTGTCCCTGCACCTACCACTCCTGTGCCTACTGCTCCTTCATCCTCTGTACACGTTAAAGTGCCCAGTGCAGAGAGTGGTGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204654.2 |
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| 3UTR CCA 90 bp | TGCTTTATTTGTTTTCAATCAGTAGCACATACTGTTTCTCGAGCATaGCAGCCCCACACTCAGAGGCATATGGGTGCTCAGTTAGAGACT | + |
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Preference number: 1 (lower is better) Translates to: CFICFQSVAHTVSRA*QPHTQRHMGAQLET Trigger: AGTCTCTAACTGAGCACCCATATGCCTCTGAGTGTGGGGCTGCCATGCTCGAGAAACAGTATGTGCTACTGATTGAAAACAAATAAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| 3UTR-3UTR CCA 90 bp | GCACAGAGATGGCTGGTAGAGGGACAGTGGGCACAGGAGCAGAAGACGAAGGACTCCCCTGCTGAAGGCTaGCTGCAATCCTTCATGCGG | + |
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Preference number: 2 (lower is better) Translates to: AQRWLVEGQWAQEQKTKDSPAEG*LQSFMR Trigger: CCGCATGAAGGATTGCAGCCAGCCTTCAGCAGGGGA...GTCCTTCGTCTTCTGCTCCTGTGCCCACTGTCCCTCTACCAGCCATCTCTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204654.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATGGCTGGTAGAGGGACAGTGGGCACAGGAGCAGAAGACGAAGGACCAAAACAGCTGTTCCCCTGCTaGAGGCTGGCTGCAATCCTT | + |
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Preference number: 2 (lower is better) Translates to: EMAGRGTVGTGAEDEGPKQLFPC*RLAAIL Trigger: AAGGATTGCAGCCAGCCTTCAGCAGGGGAACAGCTG...TTTTGGTCCTTCGTCTTCTGCTCCTGTGCCCACTGTCCCTCTACCAGCCATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204654.2 |
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| 3UTR TCA 72 bp | GACTGCAGGGCCTGGGGGCCATGGTCTGTGGTCCTATaGTCGGTCCCTTCTTCAAGGCTCCAGGAAGGATGC | + |
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Preference number: 3 (lower is better) Translates to: DCRAWGPWSVVL*SVPSSRLQEGC Trigger: GCATCCTTCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGGCCCTGCAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| 3UTR CCA 72 bp | CAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTaGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: QLETAGPGGHGL*SYDRSLLQGSR Trigger: CCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| 3UTR CCA 72 bp | GGACAGTGGGCACAGAGATGGCTGGTAGAGGGACAGTaGGCACAGGAGCAGAAGACGAAGGACCAAAACCAG | + |
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Preference number: 3 (lower is better) Translates to: GQWAQRWLVEGQ*AQEQKTKDQNQ Trigger: CTGGTTTTGGTCCTTCGTCTTCTGCTCCTGTGCCCACTGTCCCTCTACCAGCCATCTCTGTGCCCACTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204654.2 |
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| 3UTR CCA 72 bp | TGTTTTCAATCAGTAGCACATACTGTTTCTCGAGCATaGCAGCCCCACACTCAGAGGCATATGGGTGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: CFQSVAHTVSRA*QPHTQRHMGAQ Trigger: CTGAGCACCCATATGCCTCTGAGTGTGGGGCTGCCATGCTCGAGAAACAGTATGTGCTACTGATTGAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR TCA 90 bp | CAGTGGGCACAGAGATGGCTGGTAGAGGGACAGTGGGCACAGGAGCAGAAGACGTCTCGGCGCTGCCCATaGCAGGAGGCGGGCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: QWAQRWLVEGQWAQEQKTSRRCP*QEAGRA Trigger: CGCCCTGCCCGCCTCCTGTCATGGGCAGCGCCGAGA...CGTCTTCTGCTCCTGTGCCCACTGTCCCTCTACCAGCCATCTCTGTGCCCACTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204654.2 |
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| CDS-3UTR GCA 90 bp | GGGCCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCGACAGCCGGATGCCCTaGAGCACCCGGACCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GPGGHGLWSYDRSLLQGSDSRMP*STRTRS Trigger: GGAGCGGGTCCGGGTGCTGCAGGGCATCCGGCTGTC...GGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | GGCACAGAGATGGCTGGTAGAGGGACAGTGGGCACAGGAGCAGAAGACGAAGGAGACAGCCGGATGCCCTaGAGCACCCGGACCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GTEMAGRGTVGTGAEDEGDSRMP*STRTRS Trigger: GGAGCGGGTCCGGGTGCTGCAGGGCATCCGGCTGTC...TCCTTCGTCTTCTGCTCCTGTGCCCACTGTCCCTCTACCAGCCATCTCTGTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204654.2 |
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| CDS-3UTR TCA 90 bp | AGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTGGAGGTGTCACGGCGGCTaGGCTCGGCCTCTCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: RHMGAQLETAGPGGHGLWRCHGG*ARPLCP Trigger: AGGACAGAGAGGCCGAGCTCAGCCGCCGTGACACCT...CCACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032172.14 |
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| CDS-3UTR GCA 90 bp | GCAGGGCCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTTTCAGACAGCCGGATaGCCTGCAGCACCCGGACCC | + |
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Preference number: 4 (lower is better) Translates to: AGPGGHGLWSYDRSLLQGFQTAG*PAAPGP Trigger: GGGTCCGGGTGCTGCAGGGCATCCGGCTGTCTGAAA...GCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGGCCCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | GGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGAAGGATGACAGCCGGATGCCCTaGAGCACCCGGACCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GHGLWSYDRSLLQGSRKDDSRMP*STRTRS Trigger: GGAGCGGGTCCGGGTGCTGCAGGGCATCCGGCTGTC...ATCCTTCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | CCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGTTTCAGACAGCCGGATaGCCTGCAGCACCCGGACCC | + |
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Preference number: 4 (lower is better) Translates to: PGGHGLWSYDRSLLQGSRFQTAG*PAAPGP Trigger: GGGTCCGGGTGCTGCAGGGCATCCGGCTGTCTGAAA...CCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR TCA 90 bp | CCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGGCCACGTACAGAGGATaGAGGAGCAGTAGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGHGLWSYDRSLLQGSRATYRG*RSSRHR Trigger: CCTGTGCCTACTGCTCCTTCATCCTCTGTACGTGGC...CCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR TCA 90 bp | CATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTGGTCCGCTGTTGCTCATGGGTaGGGCTGGCCTTCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: HMGAQLETAGPGGHGLWSAVAHG*GWPSSW Trigger: CCAAGAAGAAGGCCAGCCTCACCCATGAGCAACAGC...GGACCACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR TCA 90 bp | AGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTGGGCTGTTGCTCATGGGTaGGGCTGGCCTTCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RHMGAQLETAGPGGHGLWAVAHG*GWPSSW Trigger: CCAAGAAGAAGGCCAGCCTCACCCATGAGCAACAGC...CCACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR TCA 90 bp | GCAGGGCCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCAGTGCTGGTATGCCTTaGCCAGGTCCGAGCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: AGPGGHGLWSYDRSLLQGSAGMP*PGPSTE Trigger: TTCTGTGCTCGGACCTGGTCAAGGCATACCAGCACT...GCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGGCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR CCA 90 bp | CATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTGGTCCTCCCCTGCTGAAGGCTaGCTGCAATCCTTCATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HMGAQLETAGPGGHGLWSSPAEG*LQSFMR Trigger: CCGCATGAAGGATTGCAGCCAGCCTTCAGCAGGGGA...GGACCACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR CCA 90 bp | CACTCAGAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGCTGGTAGAGGGACAGTaGGCACAGGAGCAGAAGACG | + |
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Preference number: 4 (lower is better) Translates to: HSEAYGCSVRDCRAWGPWLVEGQ*AQEQKT Trigger: CGTCTTCTGCTCCTGTGCCCACTGTCCCTCTACCAG...CCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTCTGAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR CCA 90 bp | CCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGCTGGTAGAGGGACAGTaGGCACAGGAGCAGAAGACG | + |
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Preference number: 4 (lower is better) Translates to: PGGHGLWSYDRSLLQGSRLVEGQ*AQEQKT Trigger: CGTCTTCTGCTCCTGTGCCCACTGTCCCTCTACCAG...CCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR TCA 90 bp | ACTCAGAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCAGCTGTTCCCCTGCTaGAGGCTGGCTGCAATCCTT | + |
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Preference number: 4 (lower is better) Translates to: TQRHMGAQLETAGPGGHGQLFPC*RLAAIL Trigger: AAGGATTGCAGCCAGCCTTCAGCAGGGGAACAGCTG...ACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTCTGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR TCA 90 bp | ACTGCAGGGCCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAATCCTCCTTCACTGCTaGGGACTGCAGACCACCACC | + |
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Preference number: 4 (lower is better) Translates to: TAGPGGHGLWSYDRSLLQILLHC*GLQTTT Trigger: GGTGGTGGTCTGCAGTCCTCAGCAGTGAAGGAGGAT...TTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGGCCCTGCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | ACTCAGAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCACAGGAGTGGTAGGTaGAGGGACAGTGGGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: TQRHMGAQLETAGPGGHGHRSGR*RDSGHR Trigger: TCTGTGCCCACTGTCCCTGCACCTACCACTCCTGTG...ACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTCTGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | CTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGACACAGGAGTGGTAGGTaGAGGGACAGTGGGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: LGAMVCGPMIGPFFKAPGHRSGR*RDSGHR Trigger: TCTGTGCCCACTGTCCCTGCACCTACCACTCCTGTG...TCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | GCAGGGCCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCCATTCTTTTCCTGGATaGGCCCCTGCTGCTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: AGPGGHGLWSYDRSLLQGHSFPG*APAAPC Trigger: ACAAGGAGCAGCAGGGGCGCATCCAGGAAAAGAATG...GCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGGCCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032172.14 |
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| CDS-3UTR GCA 90 bp | GAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTGCACACAGTGCTGGTATaGCTTGACCAGGTCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: EAYGCSVRDCRAWGPWSVHTVLV*LDQVRA Trigger: TGCTCGGACCTGGTCAAGGCATACCAGCACTGTGTG...CACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR CCA 90 bp | CCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGGACTGCTGTTGCTCATaGGTGAGGCTGGCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PGGHGLWSYDRSLLQGSRDCCCS*VRLAFF Trigger: GAAGAAGGCCAGCCTCACCCATGAGCAACAGCAGTC...CCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR CCA 90 bp | GAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTGTCAGCATTCTTTTCCTaGATGCGCCCCTGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EAYGCSVRDCRAWGPWSVSAFFS*MRPCCS Trigger: GGAGCAGCAGGGGCGCATCCAGGAAAAGAATGCTGA...CACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032172.14 |
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| CDS-3UTR CCA 90 bp | CCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGGTGCTCACACAGTGCTaGTATGCCTTGACCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PGGHGLWSYDRSLLQGSRVLTQC*YALTRS Trigger: GGACCTGGTCAAGGCATACCAGCACTGTGTGAGCAC...CCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | GCAGGGCCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCCATCTCATCCTGGACTaGCAACTGCTCCTGTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: AGPGGHGLWSYDRSLLQGHLILD*QLLLLE Trigger: TTCCAACAGGAGCAGTTGGCAGTCCAGGATGAGATG...GCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGGCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | ACTGCAGGGCCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAACACACAGTGCTGGTATaGCTTGACCAGGTCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: TAGPGGHGLWSYDRSLLQHTVLV*LDQVRA Trigger: TGCTCGGACCTGGTCAAGGCATACCAGCACTGTGTG...TTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGGCCCTGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | CTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGAGCAGTGCTCACACAGTaGTGGTATGCCTTGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGAMVCGPMIGPFFKAPGAVLTQ*WYALTR Trigger: CCTGGTCAAGGCATACCAGCACTGTGTGAGCACTGC...TCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR CCA 90 bp | ACTGCAGGGCCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTGGCCTTCTTCTTaGGCAGGGATGCCTTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: TAGPGGHGLWSYDRSLLQGWPSS*AGMPSS Trigger: ACTTGAAGGCATCCCTGCCCAAGAAGAAGGCCAGCC...TTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGGCCCTGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR CCA 90 bp | ACTCAGAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTGACTGCTGTTGCTCATaGGTGAGGCTGGCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TQRHMGAQLETAGPGGHGDCCCS*VRLAFF Trigger: GAAGAAGGCCAGCCTCACCCATGAGCAACAGCAGTC...ACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTCTGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR TCA 90 bp | GGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGAAGGATCAGCTGTTCCCCTGCTaGAGGCTGGCTGCAATCCTT | + |
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Preference number: 4 (lower is better) Translates to: GHGLWSYDRSLLQGSRKDQLFPC*RLAAIL Trigger: AAGGATTGCAGCCAGCCTTCAGCAGGGGAACAGCTG...ATCCTTCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR TCA 90 bp | GCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGAAGGATGGCCACGTACAGAGGATaGAGGAGCAGTAGGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: AMVCGPMIGPFFKAPGRMATYRG*RSSRHR Trigger: CCTGTGCCTACTGCTCCTTCATCCTCTGTACGTGGC...CATCCTTCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | CACTCAGAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGCATCTCATCCTGGACTaGCAACTGCTCCTGTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: HSEAYGCSVRDCRAWGPWHLILD*QLLLLE Trigger: TTCCAACAGGAGCAGTTGGCAGTCCAGGATGAGATG...CCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTCTGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | GAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTGGGCTGCAATCCTTCATaGGGTTCACAACACTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: EAYGCSVRDCRAWGPWSVGCNPS*GSQHFQ Trigger: CTGAAAGTGTTGTGAACCGCATGAAGGATTGCAGCC...CACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | CATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTGGTCCTCCTGGACTGCCAACTaGTCCTGTTGGAACTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: HMGAQLETAGPGGHGLWSSWTAN*SCWNFL Trigger: TAAGAAGTTCCAACAGGAGCAGTTGGCAGTCCAGGA...GGACCACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | CAGAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTCCTGGACTGCCAACTaGTCCTGTTGGAACTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: QRHMGAQLETAGPGGHGLSWTAN*SCWNFL Trigger: TAAGAAGTTCCAACAGGAGCAGTTGGCAGTCCAGGA...CAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | CATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTGGTCCAGGGATGCCTTCAAGTaGTTCTCAGCTGCCTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: HMGAQLETAGPGGHGLWSRDAFK*FSAASF Trigger: AAAAGAGGCAGCTGAGAAGCACTTGAAGGCATCCCT...GGACCACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR GCA 90 bp | CTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGATGCGGGGCTTTATTGTaGTCTCTGCTTTTGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGAMVCGPMIGPFFKAPGCGALL*SLLLKP Trigger: CGGCTTCAAAAGCAGAGAGCACAATAAAGCCCCGCA...TCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR GCA 90 bp | GGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGAAGGATGCAGTGCTCACACAGTaGTGGTATGCCTTGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHGLWSYDRSLLQGSRKDAVLTQ*WYALTR Trigger: CCTGGTCAAGGCATACCAGCACTGTGTGAGCACTGC...ATCCTTCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR CCA 90 bp | GTAGCACATACTGTTTCTCGAGCATGGCAGCCCCACACTCAGAGGCATATGGGTTCCCCTGCTGAAGGCTaGCTGCAATCCTTCATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VAHTVSRAWQPHTQRHMGSPAEG*LQSFMR Trigger: CCGCATGAAGGATTGCAGCCAGCCTTCAGCAGGGGA...ACCCATATGCCTCTGAGTGTGGGGCTGCCATGCTCGAGAAACAGTATGTGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR CCA 90 bp | GCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGAAGGATGGGCTGGCCTTCTTCTTaGGCAGGGATGCCTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AMVCGPMIGPFFKAPGRMGWPSS*AGMPSS Trigger: ACTTGAAGGCATCCCTGCCCAAGAAGAAGGCCAGCC...CATCCTTCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCTTTGAAGCCGCCTCATaGAATTGTTGGGAAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPGGHGLWSYDRSLLQGSFEAAS*NCWEDS Trigger: ACTGTCTTCCCAACAATTCCATGAGGCGGCTTCAAA...GGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR CCA 90 bp | GGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGAAGGATGTGCTCACACAGTGCTaGTATGCCTTGACCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GHGLWSYDRSLLQGSRKDVLTQC*YALTRS Trigger: GGACCTGGTCAAGGCATACCAGCACTGTGTGAGCAC...ATCCTTCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR GCA 90 bp | ACTCAGAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTGGCTGCAATCCTTCATaGGGTTCACAACACTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQRHMGAQLETAGPGGHGGCNPS*GSQHFQ Trigger: CTGAAAGTGTTGTGAACCGCATGAAGGATTGCAGCC...ACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTCTGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR GCA 90 bp | ACTCAGAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTAGGGATGCCTTCAAGTaGTTCTCAGCTGCCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQRHMGAQLETAGPGGHGRDAFK*FSAASF Trigger: AAAAGAGGCAGCTGAGAAGCACTTGAAGGCATCCCT...ACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTCTGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR TCA 90 bp | TCAGTAGCACATACTGTTTCTCGAGCATGGCAGCCCCACACTCAGAGGCATATGAGTGCTGGTATGCCTTaGCCAGGTCCGAGCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVAHTVSRAWQPHTQRHMSAGMP*PGPSTE Trigger: TTCTGTGCTCGGACCTGGTCAAGGCATACCAGCACT...CATATGCCTCTGAGTGTGGGGCTGCCATGCTCGAGAAACAGTATGTGCTACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR GCA 90 bp | GTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGAAGGATGCTGCTCTGCGGGGCTTTATTGTaGTCTCTGCTTTTGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VCGPMIGPFFKAPGRMLLCGALL*SLLLKP Trigger: CGGCTTCAAAAGCAGAGAGCACAATAAAGCCCCGCA...GAGCAGCATCCTTCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR CCA 90 bp | TCAGTAGCACATACTGTTTCTCGAGCATGGCAGCCCCACACTCAGAGGCATATGTTTACAGGTGCCTCCTaGCAGGCCACGTACAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVAHTVSRAWQPHTQRHMFTGAS*QATYRG Trigger: TCCTCTGTACGTGGCCTGCCAGGAGGCACCTGTAAA...CATATGCCTCTGAGTGTGGGGCTGCCATGCTCGAGAAACAGTATGTGCTACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR CCA 90 bp | CTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGATTTGAAGCCGCCTCATaGAATTGTTGGGAAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGAMVCGPMIGPFFKAPGFEAAS*NCWEDS Trigger: ACTGTCTTCCCAACAATTCCATGAGGCGGCTTCAAA...TCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR CCA 90 bp | TCAGTAGCACATACTGTTTCTCGAGCATGGCAGCCCCACACTCAGAGGCATATGGCCTCATGGAATTGTTaGGAAGACAGTTTATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVAHTVSRAWQPHTQRHMASWNC*EDSLYS Trigger: GCTGTATAAACTGTCTTCCCAACAATTCCATGAGGC...CATATGCCTCTGAGTGTGGGGCTGCCATGCTCGAGAAACAGTATGTGCTACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS TCA 90 bp | CCTGGATGCGCCCCTGCTGCTCCTTGTAGAAGGTGTCACGGCGGCTaGGCTCGGCCTCTCTGTCCTCCAGTTCCCTGGCTAGTCGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGCAPAAPCRRCHGG*ARPLCPPVPWLVEL Trigger: CAGCTCGACTAGCCAGGGAACTGGAGGACAGAGAGGCCGAGCTCAGCCGCCGTGACACCTTCTACAAGGAGCAGCAGGGGCGCATCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032172.14 |
||
| CDS TCA 90 bp | CAGAGGGCCTTTACAGGTGCCTCCTGGCAGGCCACGTACAGAGGATaGAGGAGCAGTAGGCACAGGAGTGGTAGGTGCAGGGACAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QRAFTGASWQATYRG*RSSRHRSGRCRDSG Trigger: CCCACTGTCCCTGCACCTACCACTCCTGTGCCTACTGCTCCTTCATCCTCTGTACGTGGCCTGCCAGGAGGCACCTGTAAAGGCCCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS GCA 90 bp | GCCTCTCTGTCCTCCAGTTCCCTGGCTAGTCGAGCTGACTGCTGTTaGTCATGGGTGAGGCTGGCCTTCTTCTTGGGCAGGGATGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASLSSSSLASRADCC*SWVRLAFFLGRDAF Trigger: GAAGGCATCCCTGCCCAAGAAGAAGGCCAGCCTCACCCATGAGCAACAGCAGTCAGCTCGACTAGCCAGGGAACTGGAGGACAGAGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032172.14 |
||
| CDS-3UTR CAA 90 bp | AGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTGGCAGTGCTGGTATGCCTaGACCAGGTCCGAGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RHMGAQLETAGPGGHGLWQCWYA*TRSEHR Trigger: TCTGTGCTCGGACCTGGTCAAGGCATACCAGCACTG...CCACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR CAA 90 bp | CAGAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGCAGTGCTGGTATGCCTaGACCAGGTCCGAGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: QRHMGAQLETAGPGGHGLQCWYA*TRSEHR Trigger: TCTGTGCTCGGACCTGGTCAAGGCATACCAGCACTG...CAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS GCA 90 bp | AGCGGAGGATCTGGGCTTGTAGGCCAGAGCACACAGGCTCCACTCTaGGGGGCTTTATTGTGCTCTCTGCTTTTGAAGCCGCCTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGGSGLVGQSTQAPL*GALLCSLLLKPPHG Trigger: TCCATGAGGCGGCTTCAAAAGCAGAGAGCACAATAAAGCCCCGCAGAGTGGAGCCTGTGTGCTCTGGCCTACAAGCCCAGATCCTCCGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR CAA 90 bp | GGGCCTGGGGGCCATGGTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCCTCTGCGGGGCTTTATaGTGCTCTCTGCTTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPGGHGLWSYDRSLLQGSLCGAL*CSLLLK Trigger: CTTCAAAAGCAGAGAGCACAATAAAGCCCCGCAGAG...GGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGCCCCCAGGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS CCA 90 bp | GACGAAGGACCAAAACCAGGAACCAGCTGTTCCCCTGCTGAAGGCTaGCTGCAATCCTTCATGCGGTTCACAACACTTTCAGACAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DEGPKPGTSCSPAEG*LQSFMRFTTLSDSR Trigger: CCGGCTGTCTGAAAGTGTTGTGAACCGCATGAAGGATTGCAGCCAGCCTTCAGCAGGGGAACAGCTGGTTCCTGGTTTTGGTCCTTCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR CAA 90 bp | AGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTGGTGCCAACTGCTCCTGTaGGAACTTCTTAAGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RHMGAQLETAGPGGHGLWCQLLL*ELLKIL Trigger: GAGGATCTTAAGAAGTTCCAACAGGAGCAGTTGGCA...CCACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS GCA 90 bp | AAGGACCAAAACCAGGAACCAGCTGTTCCCCTGCTGAAGGCTGGCTaGAATCCTTCATGCGGTTCACAACACTTTCAGACAGCCGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: KDQNQEPAVPLLKAG*NPSCGSQHFQTAGC Trigger: GCATCCGGCTGTCTGAAAGTGTTGTGAACCGCATGAAGGATTGCAGCCAGCCTTCAGCAGGGGAACAGCTGGTTCCTGGTTTTGGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR CAA 90 bp | ACTCAGAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTTGCCAACTGCTCCTGTaGGAACTTCTTAAGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TQRHMGAQLETAGPGGHGCQLLL*ELLKIL Trigger: GAGGATCTTAAGAAGTTCCAACAGGAGCAGTTGGCA...ACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTCTGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS-3UTR CAA 90 bp | GAGGCATATGGGTGCTCAGTTAGAGACTGCAGGGCCTGGGGGCCATGGTCTGTGAGCCGCCTCATGGAATaGTTGGGAAGACAGTTTATA | + |
|
Preference number: 5 (lower is better) Translates to: EAYGCSVRDCRAWGPWSVSRLME*LGRQFI Trigger: TATAAACTGTCTTCCCAACAATTCCATGAGGCGGCT...CACAGACCATGGCCCCCAGGCCCTGCAGTCTCTAACTGAGCACCCATATGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS GCA 90 bp | CTTGTAGGCCAGAGCACACAGGCTCCACTCTGCGGGGCTTTATTGTaGTCTCTGCTTTTGAAGCCGCCTCATGGAATTGTTGGGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LVGQSTQAPLCGALL*SLLLKPPHGIVGKT Trigger: TGTCTTCCCAACAATTCCATGAGGCGGCTTCAAAAGCAGAGAGCACAATAAAGCCCCGCAGAGTGGAGCCTGTGTGCTCTGGCCTACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR CAA 90 bp | GTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGAAGGATGCTGCTCCTCTGCGGGGCTTTATaGTGCTCTCTGCTTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VCGPMIGPFFKAPGRMLLLCGAL*CSLLLK Trigger: CTTCAAAAGCAGAGAGCACAATAAAGCCCCGCAGAG...GAGCAGCATCCTTCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS TCA 90 bp | AGCAGAAGACGAAGGACCAAAACCAGGAACCAGCTGTTCCCCTGCTaGAGGCTGGCTGCAATCCTTCATGCGGTTCACAACACTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRRRRTKTRNQLFPC*RLAAILHAVHNTFR Trigger: TCTGAAAGTGTTGTGAACCGCATGAAGGATTGCAGCCAGCCTTCAGCAGGGGAACAGCTGGTTCCTGGTTTTGGTCCTTCGTCTTCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS TCA 90 bp | TGCCAACTGCTCCTGTTGGAACTTCTTAAGATCCTCCTTCACTGCTaGGGACTGCAGACCACCACCACTCTCTGCACTGGGCACTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: CQLLLLELLKILLHC*GLQTTTTLCTGHFN Trigger: GTTAAAGTGCCCAGTGCAGAGAGTGGTGGTGGTCTGCAGTCCTCAGCAGTGAAGGAGGATCTTAAGAAGTTCCAACAGGAGCAGTTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS GCA 90 bp | TGCTCCTGTTGGAACTTCTTAAGATCCTCCTTCACTGCTGAGGACTaGAGACCACCACCACTCTCTGCACTGGGCACTTTAACGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CSCWNFLRSSFTAED*RPPPLSALGTLTSV Trigger: GACAGACGTTAAAGTGCCCAGTGCAGAGAGTGGTGGTGGTCTGCAGTCCTCAGCAGTGAAGGAGGATCTTAAGAAGTTCCAACAGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS TCA 90 bp | GCACACAGGCTCCACTCTGCGGGGCTTTATTGTGCTCTCTGCTTTTaGAGCCGCCTCATGGAATTGTTGGGAAGACAGTTTATACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AHRLHSAGLYCALCF*SRLMELLGRQFIQL Trigger: GAGCTGTATAAACTGTCTTCCCAACAATTCCATGAGGCGGCTTCAAAAGCAGAGAGCACAATAAAGCCCCGCAGAGTGGAGCCTGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS GCA 90 bp | TGTTGGGAAGACAGTTTATACAGCTCAGCATTTAGTCGAGCTGACTaGTGTTGCTCATGGGTGAGGCTGGCCTTCTTCTTGGGCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CWEDSLYSSAFSRAD*CCSWVRLAFFLGRD Trigger: ATCCCTGCCCAAGAAGAAGGCCAGCCTCACCCATGAGCAACAGCAGTCAGCTCGACTAAATGCTGAGCTGTATAAACTGTCTTCCCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113550.6 |
||
| CDS-3UTR CAA 90 bp | GTCTGTGGTCCTATGATCGGTCCCTTCTTCAAGGCTCCAGGAAGGATGCTGCTCCGCCTCATGGAATTGTaGGGAAGACAGTTTATACAG | + |
|
Preference number: 5 (lower is better) Translates to: VCGPMIGPFFKAPGRMLLRLMEL*GRQFIQ Trigger: CTGTATAAACTGTCTTCCCAACAATTCCATGAGGCG...GAGCAGCATCCTTCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS-3UTR CAA 90 bp | TCAGTAGCACATACTGTTTCTCGAGCATGGCAGCCCCACACTCAGAGGCATATGCGCCTCATGGAATTGTaGGGAAGACAGTTTATACAG | + |
|
Preference number: 5 (lower is better) Translates to: SVAHTVSRAWQPHTQRHMRLMEL*GRQFIQ Trigger: CTGTATAAACTGTCTTCCCAACAATTCCATGAGGCG...CATATGCCTCTGAGTGTGGGGCTGCCATGCTCGAGAAACAGTATGTGCTACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS CCA 90 bp | GGCTTTATTGTGCTCTCTGCTTTTGAAGCCGCCTCATGGAATTGTTaGGAAGACAGTTTATACAGCTCAGCATTTAGTCGAGCTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GFIVLSAFEAASWNC*EDSLYSSAFSRADC Trigger: GCAGTCAGCTCGACTAAATGCTGAGCTGTATAAACTGTCTTCCCAACAATTCCATGAGGCGGCTTCAAAAGCAGAGAGCACAATAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113550.6 |
||
| CDS CCA 90 bp | ACTCTGCGGGGCTTTATTGTGCTCTCTGCTTTTGAAGCCGCCTCATaGAATTGTTGGGAAGACAGTTTATACAGCTCAGCATTTAGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: TLRGFIVLSAFEAAS*NCWEDSLYSSAFSR Trigger: TCGACTAAATGCTGAGCTGTATAAACTGTCTTCCCAACAATTCCATGAGGCGGCTTCAAAAGCAGAGAGCACAATAAAGCCCCGCAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113550.6 |
||
| CDS TCA 72 bp | GCCCCTGCTGCTCCTTGTAGAAGGTGTCACGGCGGCTaGGCTCGGCCTCTCTGTCCTCCAGTTCCCTGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: APAAPCRRCHGG*ARPLCPPVPWL Trigger: TAGCCAGGGAACTGGAGGACAGAGAGGCCGAGCTCAGCCGCCGTGACACCTTCTACAAGGAGCAGCAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032172.14 |
||
| CDS CAA 72 bp | GACTGCTGTTGCTCATGGGTGAGGCTGGCCTTCTTCTaGGGCAGGGATGCCTTCAAGTGCTTCTCAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: DCCCSWVRLAFF*GRDAFKCFSAA Trigger: GGCAGCTGAGAAGCACTTGAAGGCATCCCTGCCCAAGAAGAAGGCCAGCCTCACCCATGAGCAACAGCAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS CAA 72 bp | CCCTTGCGGGCAGTGCTCACACAGTGCTGGTATGCCTaGACCAGGTCCGAGCACAGAAGCACTTCATGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PLRAVLTQCWYA*TRSEHRSTSCR Trigger: TCTGCATGAAGTGCTTCTGTGCTCGGACCTGGTCAAGGCATACCAGCACTGTGTGAGCACTGCCCGCAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS GCA 72 bp | GCTGTTCCCCTGCTGAAGGCTGGCTGCAATCCTTCATaGGGTTCACAACACTTTCAGACAGCCGGATGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AVPLLKAGCNPS*GSQHFQTAGCP Trigger: AGGGCATCCGGCTGTCTGAAAGTGTTGTGAACCGCATGAAGGATTGCAGCCAGCCTTCAGCAGGGGAACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS GCA 72 bp | TCTCTGTCCTCCAGTTCCCTGGCTAGTCGAGCTGACTaGTGTTGCTCATGGGTGAGGCTGGCCTTCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLSSSSLASRAD*CCSWVRLAFFL Trigger: CAAGAAGAAGGCCAGCCTCACCCATGAGCAACAGCAGTCAGCTCGACTAGCCAGGGAACTGGAGGACAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032172.14 |
||
| CDS CAA 90 bp | AGTCGAGCTGACTGCTGTTGCTCATGGGTGAGGCTGGCCTTCTTCTaGGGCAGGGATGCCTTCAAGTGCTTCTCAGCTGCCTCTTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRADCCCSWVRLAFF*GRDAFKCFSAASFS Trigger: GGAAAAAGAGGCAGCTGAGAAGCACTTGAAGGCATCCCTGCCCAAGAAGAAGGCCAGCCTCACCCATGAGCAACAGCAGTCAGCTCGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS CAA 90 bp | GGGCTTGTAGGCCAGAGCACACAGGCTCCACTCTGCGGGGCTTTATaGTGCTCTCTGCTTTTGAAGCCGCCTCATGGAATTGTTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GLVGQSTQAPLCGAL*CSLLLKPPHGIVGK Trigger: CTTCCCAACAATTCCATGAGGCGGCTTCAAAAGCAGAGAGCACAATAAAGCCCCGCAGAGTGGAGCCTGTGTGCTCTGGCCTACAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS TCA 72 bp | CGAAGGACCAAAACCAGGAACCAGCTGTTCCCCTGCTaGAGGCTGGCTGCAATCCTTCATGCGGTTCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: RRTKTRNQLFPC*RLAAILHAVHN Trigger: GTTGTGAACCGCATGAAGGATTGCAGCCAGCCTTCAGCAGGGGAACAGCTGGTTCCTGGTTTTGGTCCTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS CAA 72 bp | GGCCAGAGCACACAGGCTCCACTCTGCGGGGCTTTATaGTGCTCTCTGCTTTTGAAGCCGCCTCATGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: GQSTQAPLCGAL*CSLLLKPPHGI Trigger: AATTCCATGAGGCGGCTTCAAAAGCAGAGAGCACAATAAAGCCCCGCAGAGTGGAGCCTGTGTGCTCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
||
| CDS TCA 72 bp | CTCCTGTTGGAACTTCTTAAGATCCTCCTTCACTGCTaGGGACTGCAGACCACCACCACTCTCTGCACTGGG | + |
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Preference number: 6 (lower is better) Translates to: LLLELLKILLHC*GLQTTTTLCTG Trigger: CCCAGTGCAGAGAGTGGTGGTGGTCTGCAGTCCTCAGCAGTGAAGGAGGATCTTAAGAAGTTCCAACAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS GCA 72 bp | CTCATGGGTGAGGCTGGCCTTCTTCTTGGGCAGGGATaGCTTCAAGTGCTTCTCAGCTGCCTCTTTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LMGEAGLLLGQG*LQVLLSCLFFL Trigger: AAGGAAAAAGAGGCAGCTGAGAAGCACTTGAAGGCATCCCTGCCCAAGAAGAAGGCCAGCCTCACCCATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS GCA 72 bp | AACCAGGAACCAGCTGTTCCCCTGCTGAAGGCTGGCTaGAATCCTTCATGCGGTTCACAACACTTTCAGACA | + |
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Preference number: 6 (lower is better) Translates to: NQEPAVPLLKAG*NPSCGSQHFQT Trigger: TGTCTGAAAGTGTTGTGAACCGCATGAAGGATTGCAGCCAGCCTTCAGCAGGGGAACAGCTGGTTCCTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS GCA 72 bp | CAGAGCACACAGGCTCCACTCTGCGGGGCTTTATTGTaGTCTCTGCTTTTGAAGCCGCCTCATGGAATTGTT | + |
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Preference number: 6 (lower is better) Translates to: QSTQAPLCGALL*SLLLKPPHGIV Trigger: AACAATTCCATGAGGCGGCTTCAAAAGCAGAGAGCACAATAAAGCCCCGCAGAGTGGAGCCTGTGTGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS GCA 72 bp | TGGAACTTCTTAAGATCCTCCTTCACTGCTGAGGACTaGAGACCACCACCACTCTCTGCACTGGGCACTTTA | + |
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Preference number: 6 (lower is better) Translates to: WNFLRSSFTAED*RPPPLSALGTL Trigger: TAAAGTGCCCAGTGCAGAGAGTGGTGGTGGTCTGCAGTCCTCAGCAGTGAAGGAGGATCTTAAGAAGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS CAA 72 bp | GCTCCACTCTGCGGGGCTTTATTGTGCTCTCTGCTTTaGAAGCCGCCTCATGGAATTGTTGGGAAGACAGTT | + |
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Preference number: 6 (lower is better) Translates to: APLCGALLCSLL*KPPHGIVGKTV Trigger: AACTGTCTTCCCAACAATTCCATGAGGCGGCTTCAAAAGCAGAGAGCACAATAAAGCCCCGCAGAGTGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS CAA 90 bp | AGCACACAGGCTCCACTCTGCGGGGCTTTATTGTGCTCTCTGCTTTaGAAGCCGCCTCATGGAATTGTTGGGAAGACAGTTTATACAGCT | + |
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Preference number: 6 (lower is better) Translates to: STQAPLCGALLCSLL*KPPHGIVGKTVYTA Trigger: AGCTGTATAAACTGTCTTCCCAACAATTCCATGAGGCGGCTTCAAAAGCAGAGAGCACAATAAAGCCCCGCAGAGTGGAGCCTGTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS TCA 72 bp | CTCCACTCTGCGGGGCTTTATTGTGCTCTCTGCTTTTaGAGCCGCCTCATGGAATTGTTGGGAAGACAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LHSAGLYCALCF*SRLMELLGRQF Trigger: AAACTGTCTTCCCAACAATTCCATGAGGCGGCTTCAAAAGCAGAGAGCACAATAAAGCCCCGCAGAGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS GCA 72 bp | GACAGTTTATACAGCTCAGCATTTAGTCGAGCTGACTaGTGTTGCTCATGGGTGAGGCTGGCCTTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: DSLYSSAFSRAD*CCSWVRLAFFL Trigger: CAAGAAGAAGGCCAGCCTCACCCATGAGCAACAGCAGTCAGCTCGACTAAATGCTGAGCTGTATAAACTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113550.6 |
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| CDS CCA 72 bp | GTGCTCTCTGCTTTTGAAGCCGCCTCATGGAATTGTTaGGAAGACAGTTTATACAGCTCAGCATTCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VLSAFEAASWNC*EDSLYSSAFFS Trigger: GGAAAAGAATGCTGAGCTGTATAAACTGTCTTCCCAACAATTCCATGAGGCGGCTTCAAAAGCAGAGAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032172.14 |
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| CDS CCA 72 bp | GGCTTTATTGTGCTCTCTGCTTTTGAAGCCGCCTCATaGAATTGTTGGGAAGACAGTTTATACAGCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GFIVLSAFEAAS*NCWEDSLYSSA Trigger: TGCTGAGCTGTATAAACTGTCTTCCCAACAATTCCATGAGGCGGCTTCAAAAGCAGAGAGCACAATAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032172.14 ENSMUST00000113550.6 |
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| CDS CCA 72 bp | GTGCTCTCTGCTTTTGAAGCCGCCTCATGGAATTGTTaGGAAGACAGTTTATACAGCTCAGCATTTAGTCGA | + |
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Preference number: 6 (lower is better) Translates to: VLSAFEAASWNC*EDSLYSSAFSR Trigger: TCGACTAAATGCTGAGCTGTATAAACTGTCTTCCCAACAATTCCATGAGGCGGCTTCAAAAGCAGAGAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113550.6 |
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