RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHAT (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021919

Ensembl transcript IDs: ENSMUST00000070125.6, ENSMUST00000226365.2, ENSMUST00000227579.2

Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACGATTCTTCCACTGGCAGAGCTACCATGTGCACCACTGGGTGTTaGTGGGAAAGAAGCAGAAAGGTTAAGTTTCTAAAGACCTCAGAG +
Preference number: 1 (lower is better)
Translates to: DDSSTGRATMCTTGC*WERSRKVKFLKTSE
Trigger: CTCTGAGGTCTTTAGAAACTTAACCTTTCTGCTTCTTTCCCAGCAACACCCAGTGGTGCACATGGTAGCTCTGCCAGTGGAAGAATCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
3UTR-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTAGCAACAAGCTGGGGTaGGGGATGGGAGCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: CVEGASLCLYDLFGPIACSNKLG*GMGAGL
Trigger: TAACCCTGCTCCCATCCCCCACCCCAGCTTGTTGCT...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
3UTR-3UTR CCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGGGAGCAGCAACAAGCTaGGGTGGGGGATGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: NVFVDVGHCILNELGLSLGAATS*GGGWEQ
Trigger: CTGCTCCCATCCCCCACCCCAGCTTGTTGCTGCTCC...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
3UTR-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTGCTTCCAAGCCAGGCTaGGTCTCATTTCCAGTTGTA +
Preference number: 2 (lower is better)
Translates to: CVEGASLCLYDLFGPIACASKPG*VSFPVV
Trigger: TACAACTGGAAATGAGACCCAGCCTGGCTTGGAAGC...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
3UTR-3UTR GCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGGGCAGAGCTACCATGTaGACCACTGGGTGTTGCTGG +
Preference number: 2 (lower is better)
Translates to: NVFVDVGHCILNELGLSLGRATM*TTGCCW
Trigger: CCAGCAACACCCAGTGGTGCACATGGTAGCTCTGCC...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
3UTR-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTACCACTGGGTGTTGCTaGGAAAGAAGCAGAAAGGTT +
Preference number: 2 (lower is better)
Translates to: CVEGASLCLYDLFGPIACTTGCC*ERSRKV
Trigger: AACCTTTCTGCTTCTTTCCCAGCAACACCCAGTGGT...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
3UTR-3UTR GCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGCTCTCTCTCTTAACATaGCAGCTTCATGTGAGCCCC +
Preference number: 2 (lower is better)
Translates to: NVFVDVGHCILNELGLSLLSLLT*QLHVSP
Trigger: GGGGCTCACATGAAGCTGGCATGTTAAGAGAGAGAG...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
3UTR GCA 72 bp CTTTGTGCATGTGAGTGTGTGGAGGGAGCTAGCCTCTaGCTTTATGACTTATTTGGGCCCATAGCATGTGAT +
Preference number: 3 (lower is better)
Translates to: LCACECVEGASL*LYDLFGPIACD
Trigger: ATCACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACACTCACATGCACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AGCAGAAAGGTTAAGTTTCTAAAGACCTCAGAGGGAGCTCCCAGCCCACCCAGGGGACCGTCCTGGCCTTaGCCCACTCGCTCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SRKVKFLKTSEGAPSPPRGPSWP*PTRSSR
Trigger: ACGGGAGGAGCGAGTGGGCCAAGGCCAGGACGGTCC...CCTGGGTGGGCTGGGAGCTCCCTCTGAGGTCTTTAGAAACTTAACCTTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp GAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCACCACTGGGTGTTGCTACAGAGAGGCTGCCCTaGGAGCTGCCCCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: EMTILPLAELPCAPLGVATERLP*ELPLGP
Trigger: TGGGCCAAGGGGCAGCTCTCAGGGCAGCCTCTCTGT...AGCAACACCCAGTGGTGCACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp GAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCACCACTGGGTGTTGCTCTCGCTCCTCCCGTCTaGCGTCAGCAGGCCGATTGG +
Preference number: 4 (lower is better)
Translates to: EMTILPLAELPCAPLGVALAPPV*RQQADW
Trigger: CCAATCGGCCTGCTGACGTCAGACGGGAGGAGCGAG...AGCAACACCCAGTGGTGCACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp AGCAGAAAGGTTAAGTTTCTAAAGACCTCAGAGGGAGCTCCCAGCCCACCCAGGTGGAGATGCAGAAGGTaGTGGCCTCAGGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SRKVKFLKTSEGAPSPPRWRCRR*WPQAGG
Trigger: ACCCCCAGCCTGAGGCCATCACCTTCTGCATCTCCA...CCTGGGTGGGCTGGGAGCTCCCTCTGAGGTCTTTAGAAACTTAACCTTTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp GAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCACCACTGGGTGTTGCTACACCACACCGCAGGTaGCATCTCGGCCCACCACAA +
Preference number: 4 (lower is better)
Translates to: EMTILPLAELPCAPLGVATPHRR*HLGPPQ
Trigger: TTGTGGTGGGCCGAGATGGCACCTGCGGTGTGGTGT...AGCAACACCCAGTGGTGCACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp GAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCACCACTGGGTGTTGCTCTGAGAGCTGCCCCTTaGCCCAGTCAGTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: EMTILPLAELPCAPLGVALRAAP*PSQWEW
Trigger: CCATTCCCACTGACTGGGCCAAGGGGCAGCTCTCAG...AGCAACACCCAGTGGTGCACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AGCAGAAAGGTTAAGTTTCTAAAGACCTCAGAGGGAGCTCCCAGCCCACCCAGGCGTCAGCAGGCCGATTaGAGGCAGGCGTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SRKVKFLKTSEGAPSPPRRQQAD*RQAFIL
Trigger: GAGGATGAACGCCTGCCTCCAATCGGCCTGCTGACG...CCTGGGTGGGCTGGGAGCTCCCTCTGAGGTCTTTAGAAACTTAACCTTTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCTCGGGCTCAGGCATaGTACTGCTCTTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GPIACDEMTILPLAELPCARAQA*YCSSGP
Trigger: TGGCCCAGAAGAGCAGTATCATGCCTGAGCCCGAGC...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTCCCTGTGTGTGTCACTaGGGTCTCCAGTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: GPIACDEMTILPLAELPCPCVCH*GLQCLD
Trigger: GTCCAGGCACTGGAGACCTCAGTGACACACACAGGG...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp GAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCACCACTGGGTGTTGCTGGAGGGCCACCTGGATaGAGCCATCAGGACTGCATT +
Preference number: 4 (lower is better)
Translates to: EMTILPLAELPCAPLGVAGGPPG*SHQDCI
Trigger: AATGCAGTCCTGATGGCTTCATCCAGGTGGCCCTCC...AGCAACACCCAGTGGTGCACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp AGCAGAAAGGTTAAGTTTCTAAAGACCTCAGAGGGAGCTCCCAGCCCACCCAGGTCTCAGGTGGCTCTTTaGACAGGTCTCGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRKVKFLKTSEGAPSPPRSQVAL*TGLGPA
Trigger: AGCTGGCCCGAGACCTGTGCAAAGAGCCACCTGAGA...CCTGGGTGGGCTGGGAGCTCCCTCTGAGGTCTTTAGAAACTTAACCTTTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTTCAGCAGGTGCTCCGTaGACTGCACCAGGACGATGC +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACSAGAP*TAPGRC
Trigger: GCATCGTCCTGGTGCAGTGCACGGAGCACCTGCTGA...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCCCTCTGCAGCAGCTaGAGTTTCTCAGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GPIACDEMTILPLAELPCALCSS*SFSEAS
Trigger: GCTGGCTTCTGAGAAACTGCAGCTGCTGCAGAGGGC...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp GAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCACCACTGGGTGTTGCTTCCACCTCAGCCTTCTaGGAGCAGGGAGTTCACTCA +
Preference number: 4 (lower is better)
Translates to: EMTILPLAELPCAPLGVASTSAF*EQGVHS
Trigger: TGAGTGAACTCCCTGCTCCCAGAAGGCTGAGGTGGA...AGCAACACCCAGTGGTGCACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTCAGTTTGGGCCTGGATaGCCCTCTGCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACQFGPG*PSAAAA
Trigger: TGCAGCTGCTGCAGAGGGCCATCCAGGCCCAAACTG...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp GAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCACCACTGGGTGTTGCTTGCCGGTTATGGCCATaGCTGTGTACTCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: EMTILPLAELPCAPLGVACRLWP*LCTQFG
Trigger: CCCAAACTGAGTACACAGTCATGGCCATAACCGGCA...AGCAACACCCAGTGGTGCACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp GAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCACCACTGGGTGTTGCTGTCTCTTTGCAGCCGTaGAAGCTGGAGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: EMTILPLAELPCAPLGVAVSLQP*KLEMQK
Trigger: CTTCTGCATCTCCAGCTTTCACGGCTGCAAAGAGAC...AGCAACACCCAGTGGTGCACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGGGCTGCCCTGAGAGCTaGCCCTTGGCCCAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: FVDVGHCILNELGLSLCMGCPES*PLAQSV
Trigger: CACTGACTGGGCCAAGGGGCAGCTCTCAGGGCAGCC...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp GAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCACCACTGGGTGTTGCTACTGCACCAGGACGATaGCATCAAAAGGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: EMTILPLAELPCAPLGVATAPGR*HQKGSA
Trigger: AGCACTCCCCTTTTGATGGCATCGTCCTGGTGCAGT...AGCAACACCCAGTGGTGCACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTGAAGCGGCGGATGGATaGACTCTCATAGGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACEAADG*TLIGGH
Trigger: GTGCCCACCTATGAGAGTGCATCCATCCGCCGCTTC...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTCCTTGGCCCAGTCAGTaGGAATGGATTGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GPIACDEMTILPLAELPCPWPSQ*EWIGCP
Trigger: TGGACAGCCAATCCATTCCCACTGACTGGGCCAAGG...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp GAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCACCACTGGGTGTTGCTATGATACTGCTCTTCTaGGCCACCAGTGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: EMTILPLAELPCAPLGVAMILLF*ATSVSW
Trigger: CCAGGACACACTGGTGGCCCAGAAGAGCAGTATCAT...AGCAACACCCAGTGGTGCACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTGAGGTCTCCAGTGCCTaGACCATCCAGGCATACCAG +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACEVSSA*TIQAYQ
Trigger: CTGGTATGCCTGGATGGTCCAGGCACTGGAGACCTC...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTAGCAGAACATCTCCATaGTCGTGGGCACCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACSRTSP*SWAPGW
Trigger: CCAGCCAGGTGCCCACGACCATGGAGATGTTCTGCT...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTTGCAAACTCCACAGATaGGGTCTCTTTGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GPIACDEMTILPLAELPCCKLHR*GLFAAV
Trigger: CACGGCTGCAAAGAGACCTCATCTGTGGAGTTTGCA...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGGTGGCCAGGGTTTGCTaGAGTGGGGGCACTGGCAAC +
Preference number: 4 (lower is better)
Translates to: FVDVGHCILNELGLSLCMVARVC*SGGTGN
Trigger: GTTGCCAGTGCCCCCACTGCAGCAAACCCTGGCCAC...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTCGCTTCACAATGGCCTaGCTCTTCCTGAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: GPIACDEMTILPLAELPCRFTMA*LFLNCS
Trigger: AGAGCAGTTCAGGAAGAGCCAGGCCATTGTGAAGCG...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AGCAGAAAGGTTAAGTTTCTAAAGACCTCAGAGGGAGCTCCCAGCCCACCCAGGTCCAAGACAAAGAACTaGTTGCAGCAGGCCACGATG +
Preference number: 4 (lower is better)
Translates to: SRKVKFLKTSEGAPSPPRSKTKN*LQQATM
Trigger: CATCGTGGCCTGCTGCAACCAGTTCTTTGTCTTGGA...CCTGGGTGGGCTGGGAGCTCCCTCTGAGGTCTTTAGAAACTTAACCTTTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTACTGTGTACTCAGTTTaGGCCTGGATGGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACTVYSV*AWMALC
Trigger: GCAGAGGGCCATCCAGGCCCAAACTGAGTACACAGT...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTCTCAGTGCCAGAAGATaGTTGTCAATGGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: GPIACDEMTILPLAELPCLSARR*LSMAMP
Trigger: CGGCATGGCCATTGACAACCATCTTCTGGCACTGAG...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp AGCAGAAAGGTTAAGTTTCTAAAGACCTCAGAGGGAGCTCCCAGCCCACCCAGGTTGGTGTCTTGGAAGTaGTGCCGAGCAAAGATCACA +
Preference number: 4 (lower is better)
Translates to: SRKVKFLKTSEGAPSPPRLVSWK*CRAKIT
Trigger: TGTGATCTTTGCTCGGCAGCACTTCCAAGACACCAA...CCTGGGTGGGCTGGGAGCTCCCTCTGAGGTCTTTAGAAACTTAACCTTTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTCAGATGAGGTCTCTTTaGAGCCGTGAAAGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GPIACDEMTILPLAELPCQMRSL*SRESWR
Trigger: TCTCCAGCTTTCACGGCTGCAAAGAGACCTCATCTG...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AGCAGAAAGGTTAAGTTTCTAAAGACCTCAGAGGGAGCTCCCAGCCCACCCAGGGCTGCAAACCTTAGCTaGTCATTGGTGTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SRKVKFLKTSEGAPSPPRAANLS*SLVSWK
Trigger: CTTCCAAGACACCAATGACCAGCTAAGGTTTGCAGC...CCTGGGTGGGCTGGGAGCTCCCTCTGAGGTCTTTAGAAACTTAACCTTTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTAGTGTGTCCTGGGTATaGCCAGGAAGCCGGTATGAT +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACSVSWV*PGSRYD
Trigger: ATCATACCGGCTTCCTGGCCATACCCAGGACACACT...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGTTAAGAGGACCGTCCTaGCCTTGGCCCACTCGCTCC +
Preference number: 4 (lower is better)
Translates to: FVDVGHCILNELGLSLCMLRGPS*PWPTRS
Trigger: GGAGCGAGTGGGCCAAGGCCAGGACGGTCCTCTTAA...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTCCAGGGAGTCCCGGTTaGTGGAGTCTTTTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACPGSPG*WSLLRG
Trigger: TCCTCTTAAAAGACTCCACCAACCGGGACTCCCTGG...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTCCTTGTGGTCAGTCATaGCTTGCACAAAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GPIACDEMTILPLAELPCPCGQS*LAQKPE
Trigger: CTCTGGCTTTTGTGCAAGCCATGACTGACCACAAGG...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGCAGGAGTGGCCGATCTaGTGTTGTCCACCCGACCTT +
Preference number: 4 (lower is better)
Translates to: FVDVGHCILNELGLSLCMQEWPI*CCPPDL
Trigger: AAGGTCGGGTGGACAACATCAGATCGGCCACTCCTG...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTTGGCTCTTCCTGAACTaGTCTTCAGGTACCAGGTGT +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACWLFLN*SSGTRC
Trigger: ACACCTGGTACCTGAAGAGCAGTTCAGGAAGAGCCA...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGAGGTGCTCCGTGCACTaGACCAGGACGATGCCATCA +
Preference number: 4 (lower is better)
Translates to: FVDVGHCILNELGLSLCMRCSVH*TRTMPS
Trigger: TGATGGCATCGTCCTGGTGCAGTGCACGGAGCACCT...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGTTGCTGTTGGTGGCTTaGCTTCAGCAGGCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: FVDVGHCILNELGLSLCMLLLVA*LQQAAS
Trigger: CGAGGCAGCCTGCTGAAGGCAAGCCACCAACAGCAA...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTTGGTCATTGGTGTCTTaGAAGTGCTGCCGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACWSLVS*KCCRAK
Trigger: CTTTGCTCGGCAGCACTTCCAAGACACCAATGACCA...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGAGCTGGAGGGCCACCTaGATGAAGCCATCAGGACTG +
Preference number: 4 (lower is better)
Translates to: FVDVGHCILNELGLSLCMSWRAT*MKPSGL
Trigger: CAGTCCTGATGGCTTCATCCAGGTGGCCCTCCAGCT...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTCCACCCGACCTTCCTaGAAGCGGCGGATGGATGCA +
Preference number: 4 (lower is better)
Translates to: NVFVDVGHCILNELGLSLSTRPS*KRRMDA
Trigger: TGCATCCATCCGCCGCTTCCAGGAAGGTCGGGTGGA...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTGAAGATGGTTGTCAATaGCCATGCCGGTTATGGCCA +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACEDGCQ*PCRLWP
Trigger: TGGCCATAACCGGCATGGCCATTGACAACCATCTTC...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTCATGAACATCTCAGGTaGCTCTTTGCACAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACHEHLR*LFAQVS
Trigger: CGAGACCTGTGCAAAGAGCCACCTGAGATGTTCATG...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTATTGCTTGGCTTGGTTaGGCCTCTAGCTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GPIACDEMTILPLAELPCIAWLG*ASSSFL
Trigger: AAGGAAAGAGCTAGAGGCCCAACCAAGCCAAGCAAT...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp GAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCACCACTGGGTGTTGCTACTATCTTTCTCAACTaGGTGAACAGATCACCCTCA +
Preference number: 4 (lower is better)
Translates to: EMTILPLAELPCAPLGVATIFLN*VNRSPS
Trigger: TGAGGGTGATCTGTTCACTCAGTTGAGAAAGATAGT...AGCAACACCCAGTGGTGCACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGGTATGTTTCATCCATaGACATCTCAGGTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: GPIACDEMTILPLAELPCGMFHP*TSQVAL
Trigger: AAGAGCCACCTGAGATGTTCATGGATGAAACATACC...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGCCATCAAAAGGGGAGTaGTCACACACCACACCGCAG +
Preference number: 4 (lower is better)
Translates to: FVDVGHCILNELGLSLCMPSKGE*SHTTPQ
Trigger: CTGCGGTGTGGTGTGTGAGCACTCCCCTTTTGATGG...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp AGCAGAAAGGTTAAGTTTCTAAAGACCTCAGAGGGAGCTCCCAGCCCACCCAGGGGACGAGCTTCTTGTTaGCTGTCATCATATGTTTCA +
Preference number: 4 (lower is better)
Translates to: SRKVKFLKTSEGAPSPPRGRASC*LSSYVS
Trigger: TGAAACATATGATGACAGGCAACAAGAAGCTCGTCC...CCTGGGTGGGCTGGGAGCTCCCTCTGAGGTCTTTAGAAACTTAACCTTTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTTTGTACAGGCATCTTTaGGGGGACCTTTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACLYRHL*GDLFQD
Trigger: ATCCTGGAAAAGGTCCCCCCAAAGATGCCTGTACAA...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGCAGGGTTTGCTGCAGTaGGGGCACTGGCAACTTAGG +
Preference number: 4 (lower is better)
Translates to: NVFVDVGHCILNELGLSLQGLLQ*GHWQLR
Trigger: CCTAAGTTGCCAGTGCCCCCACTGCAGCAAACCCTG...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGTGCACTGAAGGTAGGTaGCCAGGGTTTGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: FVDVGHCILNELGLSLCMCTEGR*PGFAAV
Trigger: CACTGCAGCAAACCCTGGCCACCTACCTTCAGTGCA...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGAGGGCTAGAGTTGACTaGCAGGGCCAGGCGGTTGTT +
Preference number: 4 (lower is better)
Translates to: NVFVDVGHCILNELGLSLRARVD*QGQAVV
Trigger: AACAACCGCCTGGCCCTGCCAGTCAACTCTAGCCCT...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTACTCAGTTTGGGCCTaGATGGCCCTCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NVFVDVGHCILNELGLSLYSVWA*MALCSS
Trigger: GCTGCTGCAGAGGGCCATCCAGGCCCAAACTGAGTA...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGACATCTCCATGGTCGTaGGCACCTGGCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NVFVDVGHCILNELGLSLTSPWS*APGWWR
Trigger: TCTCCACCAGCCAGGTGCCCACGACCATGGAGATGT...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTTTCTTTACGATTCTTTaGAGTTTCTCTGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: GPIACDEMTILPLAELPCFFTIL*SFSAEE
Trigger: CTCCTCGGCAGAGAAACTTCAAAGAATCGTAAAGAA...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTCCAAGAGCTTTTCCTaGAGGGTCTCACCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: NVFVDVGHCILNELGLSLSKSFS*RVSPRP
Trigger: TGGCCTGGGTGAGACCCTGCAGGAAAAGCTCTTGGA...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTATTCAGAGACCCAATTaGCTGTCTTCTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: CVEGASLCLYDLFGPIACIQRPN*LSSPVS
Trigger: AGAGACAGGAGAAGACAGCCAATTGGGTCTCTGAAT...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGCCCAGTCAGTGGGAATaGATTGGCTGTCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: NVFVDVGHCILNELGLSLPSQWE*IGCPAE
Trigger: CTCTGCTGGACAGCCAATCCATTCCCACTGACTGGG...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGAGCACGGCAGCCTTGTaGTCAGTCATGGCTTGCACA +
Preference number: 4 (lower is better)
Translates to: NVFVDVGHCILNELGLSLSTAAL*SVMACT
Trigger: TGTGCAAGCCATGACTGACCACAAGGCTGCCGTGCT...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGATGGTCGTGGGCACCTaGCTGGTGGAGAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: FVDVGHCILNELGLSLCMMVVGT*LVERIN
Trigger: GTTTATTCTCTCCACCAGCCAGGTGCCCACGACCAT...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGTGGTCAGTCATGGCTTaGACAAAAGCCAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: FVDVGHCILNELGLSLCMWSVMA*TKARAS
Trigger: TGAGGCTCTGGCTTTTGTGCAAGCCATGACTGACCA...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR GCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGGGCCAGCTCCCTCAGTaGCAGAAGATGGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: NVFVDVGHCILNELGLSLGQLPQ*QKMVVN
Trigger: ATTGACAACCATCTTCTGGCACTGAGGGAGCTGGCC...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGAGGCTCCATACCCATTaGGTACCACAGGGCCATAAC +
Preference number: 4 (lower is better)
Translates to: NVFVDVGHCILNELGLSLRLHTH*VPQGHN
Trigger: GTTATGGCCCTGTGGTACCCAATGGGTATGGAGCCT...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGACCTTAGCTGGTCATTaGTGTCTTGGAAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: NVFVDVGHCILNELGLSLTLAGH*CLGSAA
Trigger: GGCAGCACTTCCAAGACACCAATGACCAGCTAAGGT...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGATGCACTCTCATAGGTaGGCACCAGCCTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: NVFVDVGHCILNELGLSLMHSHR*APASGK
Trigger: TTTACCAGAGGCTGGTGCCCACCTATGAGAGTGCAT...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR TCA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGCGTTGGACGCCATTTTaGCTATCTTTCTCAACTGAG +
Preference number: 4 (lower is better)
Translates to: NVFVDVGHCILNELGLSLRWTPF*LSFSTE
Trigger: CTCAGTTGAGAAAGATAGTCAAAATGGCGTCCAACG...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 90 bp GGGAGTCCCGGTTGGTGGAGTCTTTTAAGAGGACCGTCCTGGCCTTaGCCCACTCGCTCCTCCCGTCTGACGTCAGCAGGCCGATTGGAG +
Preference number: 5 (lower is better)
Translates to: GSPGWWSLLRGPSWP*PTRSSRLTSAGRLE
Trigger: CTCCAATCGGCCTGCTGACGTCAGACGGGAGGAGCGAGTGGGCCAAGGCCAGGACGGTCCTCTTAAAAGACTCCACCAACCGGGACTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 90 bp AGGTGCTCCGTGCACTGCACCAGGACGATGCCATCAAAAGGGGAGTaGTCACACACCACACCGCAGGTGCCATCTCGGCCCACCACAAAC +
Preference number: 5 (lower is better)
Translates to: RCSVHCTRTMPSKGE*SHTTPQVPSRPTTN
Trigger: GTTTGTGGTGGGCCGAGATGGCACCTGCGGTGTGGTGTGTGAGCACTCCCCTTTTGATGGCATCGTCCTGGTGCAGTGCACGGAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 90 bp CCACCCGACCTTCCTGGAAGCGGCGGATGGATGCACTCTCATAGGTaGGCACCAGCCTCTGGTAAAGCCTGTAGTAAGCCAGCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: PPDLPGSGGWMHSHR*APASGKACSKPAGG
Trigger: CCCTCCAGCTGGCTTACTACAGGCTTTACCAGAGGCTGGTGCCCACCTATGAGAGTGCATCCATCCGCCGCTTCCAGGAAGGTCGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS TCA 90 bp CAGTCATGGCTTGCACAAAAGCCAGAGCCTCAGGAGTGGCCGATCTaGTGTTGTCCACCCGACCTTCCTGGAAGCGGCGGATGGATGCAC +
Preference number: 5 (lower is better)
Translates to: QSWLAQKPEPQEWPI*CCPPDLPGSGGWMH
Trigger: GTGCATCCATCCGCCGCTTCCAGGAAGGTCGGGTGGACAACATCAGATCGGCCACTCCTGAGGCTCTGGCTTTTGTGCAAGCCATGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 90 bp CAGGCCACGATGACATGCTCGGGCTCAGGCATGATACTGCTCTTCTaGGCCACCAGTGTGTCCTGGGTATGGCCAGGAAGCCGGTATGAT +
Preference number: 5 (lower is better)
Translates to: QATMTCSGSGMILLF*ATSVSWVWPGSRYD
Trigger: ATCATACCGGCTTCCTGGCCATACCCAGGACACACTGGTGGCCCAGAAGAGCAGTATCATGCCTGAGCCCGAGCATGTCATCGTGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS CCA 90 bp CTCTGCAGCAGCTGCAGTTTCTCAGAAGCCAGCACGGCAGCCTTGTaGTCAGTCATGGCTTGCACAAAAGCCAGAGCCTCAGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: LCSSCSFSEASTAAL*SVMACTKARASGVA
Trigger: GGCCACTCCTGAGGCTCTGGCTTTTGTGCAAGCCATGACTGACCACAAGGCTGCCGTGCTGGCTTCTGAGAAACTGCAGCTGCTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp AGCAGAAAGGTTAAGTTTCTAAAGACCTCAGAGGGAGCTCCCAGCCCACCCAGGGTAGGTGGCCAGGGTTaGCTGCAGTGGGGGCACTGG +
Preference number: 5 (lower is better)
Translates to: SRKVKFLKTSEGAPSPPRVGGQG*LQWGHW
Trigger: CCAGTGCCCCCACTGCAGCAAACCCTGGCCACCTAC...CCTGGGTGGGCTGGGAGCTCCCTCTGAGGTCTTTAGAAACTTAACCTTTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 90 bp GGACGATGCCATCAAAAGGGGAGTGCTCACACACCACACCGCAGGTaGCATCTCGGCCCACCACAAACTGCAGGGACTTGTCATACCAAC +
Preference number: 5 (lower is better)
Translates to: GRCHQKGSAHTPHRR*HLGPPQTAGTCHTN
Trigger: GTTGGTATGACAAGTCCCTGCAGTTTGTGGTGGGCCGAGATGGCACCTGCGGTGTGGTGTGTGAGCACTCCCCTTTTGATGGCATCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 90 bp GTTATGGCCATGACTGTGTACTCAGTTTGGGCCTGGATGGCCCTCTaGAGCAGCTGCAGTTTCTCAGAAGCCAGCACGGCAGCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: VMAMTVYSVWAWMAL*SSCSFSEASTAALW
Trigger: CCACAAGGCTGCCGTGCTGGCTTCTGAGAAACTGCAGCTGCTGCAGAGGGCCATCCAGGCCCAAACTGAGTACACAGTCATGGCCATAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 90 bp CATCTCAGGTGGCTCTTTGCACAGGTCTCGGGCCAGCTCCCTCAGTaGCAGAAGATGGTTGTCAATGGCCATGCCGGTTATGGCCATGAC +
Preference number: 5 (lower is better)
Translates to: HLRWLFAQVSGQLPQ*QKMVVNGHAGYGHD
Trigger: GTCATGGCCATAACCGGCATGGCCATTGACAACCATCTTCTGGCACTGAGGGAGCTGGCCCGAGACCTGTGCAAAGAGCCACCTGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 90 bp ATGGCCATGCCGGTTATGGCCATGACTGTGTACTCAGTTTGGGCCTaGATGGCCCTCTGCAGCAGCTGCAGTTTCTCAGAAGCCAGCACG +
Preference number: 5 (lower is better)
Translates to: MAMPVMAMTVYSVWA*MALCSSCSFSEAST
Trigger: CGTGCTGGCTTCTGAGAAACTGCAGCTGCTGCAGAGGGCCATCCAGGCCCAAACTGAGTACACAGTCATGGCCATAACCGGCATGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp GAGATGACGATTCTTCCACTGGCAGAGCTACCATGTGCACCACTGGGTGTTGCTCCTGAGAGCTGCCCCTaGGCCCAGTCAGTGGGAATG +
Preference number: 5 (lower is better)
Translates to: EMTILPLAELPCAPLGVAPESCP*AQSVGM
Trigger: CATTCCCACTGACTGGGCCAAGGGGCAGCTCTCAGG...AGCAACACCCAGTGGTGCACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 90 bp AGGCTGGCTGCAAACCTTAGCTGGTCATTGGTGTCTTGGAAGTGCTaGCGAGCAAAGATCACAGCAGGGCTAGAGTTGACTGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RLAANLSWSLVSWKC*RAKITAGLELTGRA
Trigger: GGCCCTGCCAGTCAACTCTAGCCCTGCTGTGATCTTTGCTCGGCAGCACTTCCAAGACACCAATGACCAGCTAAGGTTTGCAGCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS GCA 90 bp CGATCTGATGTTGTCCACCCGACCTTCCTGGAAGCGGCGGATGGATaGACTCTCATAGGTGGGCACCAGCCTCTGGTAAAGCCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: RSDVVHPTFLEAADG*TLIGGHQPLVKPVV
Trigger: TACTACAGGCTTTACCAGAGGCTGGTGCCCACCTATGAGAGTGCATCCATCCGCCGCTTCCAGGAAGGTCGGGTGGACAACATCAGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 90 bp GGCTCTTTGCACAGGTCTCGGGCCAGCTCCCTCAGTGCCAGAAGATaGTTGTCAATGGCCATGCCGGTTATGGCCATGACTGTGTACTCA +
Preference number: 5 (lower is better)
Translates to: GSLHRSRASSLSARR*LSMAMPVMAMTVYS
Trigger: TGAGTACACAGTCATGGCCATAACCGGCATGGCCATTGACAACCATCTTCTGGCACTGAGGGAGCTGGCCCGAGACCTGTGCAAAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp AGCAGAAAGGTTAAGTTTCTAAAGACCTCAGAGGGAGCTCCCAGCCCACCCAGGGTGGCCGATCTGATGTaGTCCACCCGACCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SRKVKFLKTSEGAPSPPRVADLM*STRPSW
Trigger: CCAGGAAGGTCGGGTGGACAACATCAGATCGGCCAC...CCTGGGTGGGCTGGGAGCTCCCTCTGAGGTCTTTAGAAACTTAACCTTTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 90 bp TCATCATATGTTTCAGCAGGTGCTCCGTGCACTGCACCAGGACGATaGCATCAAAAGGGGAGTGCTCACACACCACACCGCAGGTGCCAT +
Preference number: 5 (lower is better)
Translates to: SSYVSAGAPCTAPGR*HQKGSAHTPHRRCH
Trigger: ATGGCACCTGCGGTGTGGTGTGTGAGCACTCCCCTTTTGATGGCATCGTCCTGGTGCAGTGCACGGAGCACCTGCTGAAACATATGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 90 bp GCTCGGACGAGCTTCTTGTTGCCTGTCATCATATGTTTCAGCAGGTaGTCCGTGCACTGCACCAGGACGATGCCATCAAAAGGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: ARTSFLLPVIICFSR*SVHCTRTMPSKGEC
Trigger: GCACTCCCCTTTTGATGGCATCGTCCTGGTGCAGTGCACGGAGCACCTGCTGAAACATATGATGACAGGCAACAAGAAGCTCGTCCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 90 bp AGTTTCTCAGAAGCCAGCACGGCAGCCTTGTGGTCAGTCATGGCTTaGACAAAAGCCAGAGCCTCAGGAGTGGCCGATCTGATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: SFSEASTAALWSVMA*TKARASGVADLMLS
Trigger: GGACAACATCAGATCGGCCACTCCTGAGGCTCTGGCTTTTGTGCAAGCCATGACTGACCACAAGGCTGCCGTGCTGGCTTCTGAGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 90 bp CCTCTAGCTCTTTCCTTTGCTGTTGGTGGCTTGCCTTCAGCAGGCTaGCTCGAACTACAGAGGTCTCTCATGTCAACAAGGCTCGCTCCC +
Preference number: 5 (lower is better)
Translates to: PLALSFAVGGLPSAG*LELQRSLMSTRLAP
Trigger: GGGAGCGAGCCTTGTTGACATGAGAGACCTCTGTAGTTCGAGGCAGCCTGCTGAAGGCAAGCCACCAACAGCAAAGGAAAGAGCTAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 90 bp CGAGATGGCCTTGAGTTTCTGGGGAACATTTCCACCTCAGCCTTCTaGGAGCAGGGAGTTCACTCACTGAGTCAGCTCGGACGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: RDGLEFLGNISTSAF*EQGVHSLSQLGRAS
Trigger: AGAAGCTCGTCCGAGCTGACTCAGTGAGTGAACTCCCTGCTCCCAGAAGGCTGAGGTGGAAATGTTCCCCAGAAACTCAAGGCCATCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGAGGACCGTCCTGGCCTaGGCCCACTCGCTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: FVDVGHCILNELGLSLCMRTVLA*AHSLLP
Trigger: CGGGAGGAGCGAGTGGGCCAAGGCCAGGACGGTCCT...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS TCA 90 bp CAGATGAGGTCTCTTTGCAGCCGTGAAAGCTGGAGATGCAGAAGGTaGTGGCCTCAGGCTGGGGGTTATAACAGGCTCCATACCCATTGG +
Preference number: 5 (lower is better)
Translates to: QMRSLCSRESWRCRR*WPQAGGYNRLHTHW
Trigger: CCAATGGGTATGGAGCCTGTTATAACCCCCAGCCTGAGGCCATCACCTTCTGCATCTCCAGCTTTCACGGCTGCAAAGAGACCTCATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 90 bp ATGAGGCTGGCTGCAAACCTTAGCTGGTCATTGGTGTCTTGGAAGTaGTGCCGAGCAAAGATCACAGCAGGGCTAGAGTTGACTGGCAGG +
Preference number: 5 (lower is better)
Translates to: MRLAANLSWSLVSWK*CRAKITAGLELTGR
Trigger: CCTGCCAGTCAACTCTAGCCCTGCTGTGATCTTTGCTCGGCAGCACTTCCAAGACACCAATGACCAGCTAAGGTTTGCAGCCAGCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS GCA 90 bp ACAACATCCAAGACAAAGAACTGGTTGCAGCAGGCCACGATGACATaGTCGGGCTCAGGCATGATACTGCTCTTCTGGGCCACCAGTGTG +
Preference number: 5 (lower is better)
Translates to: TTSKTKNWLQQATMT*SGSGMILLFWATSV
Trigger: CACACTGGTGGCCCAGAAGAGCAGTATCATGCCTGAGCCCGAGCATGTCATCGTGGCCTGCTGCAACCAGTTCTTTGTCTTGGATGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS GCA 90 bp GAGCAGGGAGTTCACTCACTGAGTCAGCTCGGACGAGCTTCTTGTTaGCTGTCATCATATGTTTCAGCAGGTGCTCCGTGCACTGCACCA +
Preference number: 5 (lower is better)
Translates to: EQGVHSLSQLGRASC*LSSYVSAGAPCTAP
Trigger: TGGTGCAGTGCACGGAGCACCTGCTGAAACATATGATGACAGGCAACAAGAAGCTCGTCCGAGCTGACTCAGTGAGTGAACTCCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTACGTCAGCAGGCCGATaGGAGGCAGGCGTTCATCCT +
Preference number: 5 (lower is better)
Translates to: CVEGASLCLYDLFGPIACTSAGR*EAGVHP
Trigger: AGGATGAACGCCTGCCTCCAATCGGCCTGCTGACGT...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS TCA 90 bp CATGTCAACAAGGCTCGCTCCCACCGCTTCTGCAAACTCCACAGATaGGGTCTCTTTGCAGCCGTGAAAGCTGGAGATGCAGAAGGTGAT +
Preference number: 5 (lower is better)
Translates to: HVNKARSHRFCKLHR*GLFAAVKAGDAEGD
Trigger: ATCACCTTCTGCATCTCCAGCTTTCACGGCTGCAAAGAGACCTCATCTGTGGAGTTTGCAGAAGCGGTGGGAGCGAGCCTTGTTGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 90 bp CGAGCTTCTTGTTGCCTGTCATCATATGTTTCAGCAGGTGCTCCGTaGACTGCACCAGGACGATGCCATCAAAAGGGGAGTGCTCACACA +
Preference number: 5 (lower is better)
Translates to: RASCCLSSYVSAGAP*TAPGRCHQKGSAHT
Trigger: TGTGTGAGCACTCCCCTTTTGATGGCATCGTCCTGGTGCAGTGCACGGAGCACCTGCTGAAACATATGATGACAGGCAACAAGAAGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 90 bp TCTTTGAAGTTTCTCTGCCGAGGAGGCGAGATGGCCTTGAGTTTCTaGGGAACATTTCCACCTCAGCCTTCTGGGAGCAGGGAGTTCACT +
Preference number: 5 (lower is better)
Translates to: SLKFLCRGGEMALSF*GTFPPQPSGSREFT
Trigger: AGTGAACTCCCTGCTCCCAGAAGGCTGAGGTGGAAATGTTCCCCAGAAACTCAAGGCCATCTCGCCTCCTCGGCAGAGAAACTTCAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 90 bp AAACCGGTTGCTCATCAGGTATGTTTCATCCATGAACATCTCAGGTaGCTCTTTGCACAGGTCTCGGGCCAGCTCCCTCAGTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: KPVAHQVCFIHEHLR*LFAQVSGQLPQCQK
Trigger: CTTCTGGCACTGAGGGAGCTGGCCCGAGACCTGTGCAAAGAGCCACCTGAGATGTTCATGGATGAAACATACCTGATGAGCAACCGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp AGCAGAAAGGTTAAGTTTCTAAAGACCTCAGAGGGAGCTCCCAGCCCACCCAGGCTGGTCATTGGTGTCTaGGAAGTGCTGCCGAGCAAA +
Preference number: 5 (lower is better)
Translates to: SRKVKFLKTSEGAPSPPRLVIGV*EVLPSK
Trigger: TTTGCTCGGCAGCACTTCCAAGACACCAATGACCAG...CCTGGGTGGGCTGGGAGCTCCCTCTGAGGTCTTTAGAAACTTAACCTTTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 90 bp TTCTTGTTGCCTGTCATCATATGTTTCAGCAGGTGCTCCGTGCACTaGACCAGGACGATGCCATCAAAAGGGGAGTGCTCACACACCACA +
Preference number: 5 (lower is better)
Translates to: FLLPVIICFSRCSVH*TRTMPSKGECSHTT
Trigger: TGTGGTGTGTGAGCACTCCCCTTTTGATGGCATCGTCCTGGTGCAGTGCACGGAGCACCTGCTGAAACATATGATGACAGGCAACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTAGTGCCAGAAGATGGTaGTCAATGGCCATGCCGGTT +
Preference number: 5 (lower is better)
Translates to: GPIACDEMTILPLAELPCSARRW*SMAMPV
Trigger: AACCGGCATGGCCATTGACAACCATCTTCTGGCACT...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTAACCTTAGCTGGTCATaGGTGTCTTGGAAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: GPIACDEMTILPLAELPCNLSWS*VSWKCC
Trigger: GCAGCACTTCCAAGACACCAATGACCAGCTAAGGTT...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGGCCAGCACGGCAGCCTaGTGGTCAGTCATGGCTTGC +
Preference number: 5 (lower is better)
Translates to: NVFVDVGHCILNELGLSLASTAA*WSVMAC
Trigger: GCAAGCCATGACTGACCACAAGGCTGCCGTGCTGGC...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp TGTGTGGAGGGAGCTAGCCTCTGCCTTTATGACTTATTTGGGCCCATAGCATGTAAGACAAAGAACTGGTaGCAGCAGGCCACGATGACA +
Preference number: 5 (lower is better)
Translates to: CVEGASLCLYDLFGPIACKTKNW*QQATMT
Trigger: TGTCATCGTGGCCTGCTGCAACCAGTTCTTTGTCTT...ACATGCTATGGGCCCAAATAAGTCATAAAGGCAGAGGCTAGCTCCCTCCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp GGGCCCATAGCATGTGATGAGATGACGATTCTTCCACTGGCAGAGCTACCATGTACAAACTGCAGGGACTaGTCATACCAACGATTCGCT +
Preference number: 5 (lower is better)
Translates to: GPIACDEMTILPLAELPCTNCRD*SYQRFA
Trigger: AGCGAATCGTTGGTATGACAAGTCCCTGCAGTTTGT...ACATGGTAGCTCTGCCAGTGGAAGAATCGTCATCTCATCACATGCTATGGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGTTTGCTGTTGGTGGCTaGCCTTCAGCAGGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: FVDVGHCILNELGLSLCMFAVGG*PSAGCL
Trigger: GAGGCAGCCTGCTGAAGGCAAGCCACCAACAGCAAA...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGGTCAGTGGGAATGGATaGGCTGTCCAGCAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: NVFVDVGHCILNELGLSLVSGNG*AVQQSL
Trigger: AAGGCTCTGCTGGACAGCCAATCCATTCCCACTGAC...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGGTGGTCAGTCATGGCTaGCACAAAAGCCAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: NVFVDVGHCILNELGLSLVVSHG*HKSQSL
Trigger: GAGGCTCTGGCTTTTGTGCAAGCCATGACTGACCAC...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGCTCTTTCCTTTGCTGTaGGTGGCTTGCCTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: FVDVGHCILNELGLSLCMLFPLL*VACLQQ
Trigger: CTGCTGAAGGCAAGCCACCAACAGCAAAGGAAAGAG...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS TCA 90 bp AGGCGTTCATCCTCGTTGGACGCCATTTTGACTATCTTTCTCAACTaGGTGAACAGATCACCCTCACTGAGACGGCGGAAATTAATGACA +
Preference number: 5 (lower is better)
Translates to: RRSSSLDAILTIFLN*VNRSPSLRRRKLMT
Trigger: TGTCATTAATTTCCGCCGTCTCAGTGAGGGTGATCTGTTCACTCAGTTGAGAAAGATAGTCAAAATGGCGTCCAACGAGGATGAACGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGTTCAGGTACCAGGTGTaGCATGCACTGAAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: FVDVGHCILNELGLSLCMFRYQV*HALKVG
Trigger: ACCTACCTTCAGTGCATGCAACACCTGGTACCTGAA...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp AATGTCTTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGGGCAGGGCCAGGCGGTaGTTTAGATACATGTCATTC +
Preference number: 5 (lower is better)
Translates to: NVFVDVGHCILNELGLSLGRARR*FRYMSF
Trigger: GAATGACATGTATCTAAACAACCGCCTGGCCCTGCC...CAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAAGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGAGGCGTTCATCCTCGTaGGACGCCATTTTGACTATC +
Preference number: 5 (lower is better)
Translates to: FVDVGHCILNELGLSLCMRRSSS*DAILTI
Trigger: GATAGTCAAAATGGCGTCCAACGAGGATGAACGCCT...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS-3UTR CAA 90 bp TTTGTGGATGTGGGCCACTGTATTCTAAATGAACTTGGGCTGTCTTTGTGCATGCGGACGAGCTTCTTGTaGCCTGTCATCATATGTTTC +
Preference number: 5 (lower is better)
Translates to: FVDVGHCILNELGLSLCMRTSFL*PVIICF
Trigger: GAAACATATGATGACAGGCAACAAGAAGCTCGTCCG...CATGCACAAAGACAGCCCAAGTTCATTTAGAATACAGTGGCCCACATCCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 90 bp ATAAACAATGAAATCCAGATTCTTTACGATTCTTTGAAGTTTCTCTaGCGAGGAGGCGAGATGGCCTTGAGTTTCTGGGGAACATTTCCA +
Preference number: 5 (lower is better)
Translates to: INNEIQILYDSLKFL*RGGEMALSFWGTFP
Trigger: TGGAAATGTTCCCCAGAAACTCAAGGCCATCTCGCCTCCTCGGCAGAGAAACTTCAAAGAATCGTAAAGAATCTGGATTTCATTGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS TCA 72 bp GACCGTCCTGGCCTTGGCCCACTCGCTCCTCCCGTCTaGCGTCAGCAGGCCGATTGGAGGCAGGCGTTCATC +
Preference number: 6 (lower is better)
Translates to: DRPGLGPLAPPV*RQQADWRQAFI
Trigger: GATGAACGCCTGCCTCCAATCGGCCTGCTGACGTCAGACGGGAGGAGCGAGTGGGCCAAGGCCAGGACGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 90 bp AGGGAGTCCCGGTTGGTGGAGTCTTTTAAGAGGACCGTCCTGGCCTaGGCCCACTCGCTCCTCCCGTCTGACGTCAGCAGGCCGATTGGA +
Preference number: 6 (lower is better)
Translates to: RESRLVESFKRTVLA*AHSLLPSDVSRPIG
Trigger: TCCAATCGGCCTGCTGACGTCAGACGGGAGGAGCGAGTGGGCCAAGGCCAGGACGGTCCTCTTAAAAGACTCCACCAACCGGGACTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 72 bp GTGCACTGCACCAGGACGATGCCATCAAAAGGGGAGTaGTCACACACCACACCGCAGGTGCCATCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: VHCTRTMPSKGE*SHTTPQVPSRP
Trigger: GGGCCGAGATGGCACCTGCGGTGTGGTGTGTGAGCACTCCCCTTTTGATGGCATCGTCCTGGTGCAGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 72 bp GAGGCTGCCCTGAGAGCTGCCCCTTGGCCCAGTCAGTaGGAATGGATTGGCTGTCCAGCAGAGCCTTGTAGC +
Preference number: 6 (lower is better)
Translates to: EAALRAAPWPSQ*EWIGCPAEPCS
Trigger: GCTACAAGGCTCTGCTGGACAGCCAATCCATTCCCACTGACTGGGCCAAGGGGCAGCTCTCAGGGCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS CCA 72 bp GGTTGGTGGAGTCTTTTAAGAGGACCGTCCTGGCCTTaGCCCACTCGCTCCTCCCGTCTGACGTCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: GWWSLLRGPSWP*PTRSSRLTSAG
Trigger: GCCTGCTGACGTCAGACGGGAGGAGCGAGTGGGCCAAGGCCAGGACGGTCCTCTTAAAAGACTCCACCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 72 bp CCCACTCGCTCCTCCCGTCTGACGTCAGCAGGCCGATaGGAGGCAGGCGTTCATCCTCGTTGGACGCCATTT +
Preference number: 6 (lower is better)
Translates to: PTRSSRLTSAGR*EAGVHPRWTPF
Trigger: AAATGGCGTCCAACGAGGATGAACGCCTGCCTCCAATCGGCCTGCTGACGTCAGACGGGAGGAGCGAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 72 bp CGGTTGGTGGAGTCTTTTAAGAGGACCGTCCTGGCCTaGGCCCACTCGCTCCTCCCGTCTGACGTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RLVESFKRTVLA*AHSLLPSDVSR
Trigger: CCTGCTGACGTCAGACGGGAGGAGCGAGTGGGCCAAGGCCAGGACGGTCCTCTTAAAAGACTCCACCAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 72 bp AGTCCCGGTTGGTGGAGTCTTTTAAGAGGACCGTCCTaGCCTTGGCCCACTCGCTCCTCCCGTCTGACGTCA +
Preference number: 6 (lower is better)
Translates to: SPGWWSLLRGPS*PWPTRSSRLTS
Trigger: TGACGTCAGACGGGAGGAGCGAGTGGGCCAAGGCCAGGACGGTCCTCTTAAAAGACTCCACCAACCGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS TCA 72 bp CTTGCACAAAAGCCAGAGCCTCAGGAGTGGCCGATCTaGTGTTGTCCACCCGACCTTCCTGGAAGCGGCGGA +
Preference number: 6 (lower is better)
Translates to: LAQKPEPQEWPI*CCPPDLPGSGG
Trigger: TCCGCCGCTTCCAGGAAGGTCGGGTGGACAACATCAGATCGGCCACTCCTGAGGCTCTGGCTTTTGTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 72 bp GTTTCAGCAGGTGCTCCGTGCACTGCACCAGGACGATaGCATCAAAAGGGGAGTGCTCACACACCACACCGC +
Preference number: 6 (lower is better)
Translates to: VSAGAPCTAPGR*HQKGSAHTPHR
Trigger: GCGGTGTGGTGTGTGAGCACTCCCCTTTTGATGGCATCGTCCTGGTGCAGTGCACGGAGCACCTGCTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 72 bp GTTGTCCACCCGACCTTCCTGGAAGCGGCGGATGGATaGACTCTCATAGGTGGGCACCAGCCTCTGGTAAAG +
Preference number: 6 (lower is better)
Translates to: VVHPTFLEAADG*TLIGGHQPLVK
Trigger: CTTTACCAGAGGCTGGTGCCCACCTATGAGAGTGCATCCATCCGCCGCTTCCAGGAAGGTCGGGTGGACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 72 bp AGGCCACCAGGGGCCCCAAACCGCTTCACAATGGCCTaGCTCTTCCTGAACTGCTCTTCAGGTACCAGGTGT +
Preference number: 6 (lower is better)
Translates to: RPPGAPNRFTMA*LFLNCSSGTRC
Trigger: ACACCTGGTACCTGAAGAGCAGTTCAGGAAGAGCCAGGCCATTGTGAAGCGGTTTGGGGCCCCTGGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS CCA 72 bp TCTCAGAAGCCAGCACGGCAGCCTTGTGGTCAGTCATaGCTTGCACAAAAGCCAGAGCCTCAGGAGTGGCCG +
Preference number: 6 (lower is better)
Translates to: SQKPARQPCGQS*LAQKPEPQEWP
Trigger: CGGCCACTCCTGAGGCTCTGGCTTTTGTGCAAGCCATGACTGACCACAAGGCTGCCGTGCTGGCTTCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 90 bp GCCCTCTGCAGCAGCTGCAGTTTCTCAGAAGCCAGCACGGCAGCCTaGTGGTCAGTCATGGCTTGCACAAAAGCCAGAGCCTCAGGAGTG +
Preference number: 6 (lower is better)
Translates to: ALCSSCSFSEASTAA*WSVMACTKARASGV
Trigger: CACTCCTGAGGCTCTGGCTTTTGTGCAAGCCATGACTGACCACAAGGCTGCCGTGCTGGCTTCTGAGAAACTGCAGCTGCTGCAGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 90 bp ATGGCTTGCACAAAAGCCAGAGCCTCAGGAGTGGCCGATCTGATGTaGTCCACCCGACCTTCCTGGAAGCGGCGGATGGATGCACTCTCA +
Preference number: 6 (lower is better)
Translates to: MACTKARASGVADLM*STRPSWKRRMDALS
Trigger: TGAGAGTGCATCCATCCGCCGCTTCCAGGAAGGTCGGGTGGACAACATCAGATCGGCCACTCCTGAGGCTCTGGCTTTTGTGCAAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 72 bp ATGACATGCTCGGGCTCAGGCATGATACTGCTCTTCTaGGCCACCAGTGTGTCCTGGGTATGGCCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: MTCSGSGMILLF*ATSVSWVWPGS
Trigger: GCTTCCTGGCCATACCCAGGACACACTGGTGGCCCAGAAGAGCAGTATCATGCCTGAGCCCGAGCATGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS CCA 72 bp AGATGCAGCGCTCGATCATGTCCAGGGAGTCCCGGTTaGTGGAGTCTTTTAAGAGGACCGTCCTGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: RCSARSCPGSPG*WSLLRGPSWPW
Trigger: CCAAGGCCAGGACGGTCCTCTTAAAAGACTCCACCAACCGGGACTCCCTGGACATGATCGAGCGCTGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 72 bp CACAGGTCTCGGGCCAGCTCCCTCAGTGCCAGAAGATaGTTGTCAATGGCCATGCCGGTTATGGCCATGACT +
Preference number: 6 (lower is better)
Translates to: HRSRASSLSARR*LSMAMPVMAMT
Trigger: AGTCATGGCCATAACCGGCATGGCCATTGACAACCATCTTCTGGCACTGAGGGAGCTGGCCCGAGACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 72 bp CAGATGCAGCGCTCGATCATGTCCAGGGAGTCCCGGTaGGTGGAGTCTTTTAAGAGGACCGTCCTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: QMQRSIMSRESR*VESFKRTVLAL
Trigger: CAAGGCCAGGACGGTCCTCTTAAAAGACTCCACCAACCGGGACTCCCTGGACATGATCGAGCGCTGCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 72 bp ACAAAAGCCAGAGCCTCAGGAGTGGCCGATCTGATGTaGTCCACCCGACCTTCCTGGAAGCGGCGGATGGAT +
Preference number: 6 (lower is better)
Translates to: TKARASGVADLM*STRPSWKRRMD
Trigger: ATCCATCCGCCGCTTCCAGGAAGGTCGGGTGGACAACATCAGATCGGCCACTCCTGAGGCTCTGGCTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 72 bp AGAAGCCAGCACGGCAGCCTTGTGGTCAGTCATGGCTaGCACAAAAGCCAGAGCCTCAGGAGTGGCCGATCT +
Preference number: 6 (lower is better)
Translates to: RSQHGSLVVSHG*HKSQSLRSGRS
Trigger: AGATCGGCCACTCCTGAGGCTCTGGCTTTTGTGCAAGCCATGACTGACCACAAGGCTGCCGTGCTGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 72 bp AGGTCTCGGGCCAGCTCCCTCAGTGCCAGAAGATGGTaGTCAATGGCCATGCCGGTTATGGCCATGACTGTG +
Preference number: 6 (lower is better)
Translates to: RSRASSLSARRW*SMAMPVMAMTV
Trigger: CACAGTCATGGCCATAACCGGCATGGCCATTGACAACCATCTTCTGGCACTGAGGGAGCTGGCCCGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS TCA 72 bp GAGTCTGTAGTACTGCTTCATACAGAGAGGCTGCCCTaGGAGCTGCCCCTTGGCCCAGTCAGTGGGAATGGA +
Preference number: 6 (lower is better)
Translates to: ESVVLLHTERLP*ELPLGPVSGNG
Trigger: TCCATTCCCACTGACTGGGCCAAGGGGCAGCTCTCAGGGCAGCCTCTCTGTATGAAGCAGTACTACAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS GCA 72 bp TGGCTCTTTGCACAGGTCTCGGGCCAGCTCCCTCAGTaGCAGAAGATGGTTGTCAATGGCCATGCCGGTTAT +
Preference number: 6 (lower is better)
Translates to: WLFAQVSGQLPQ*QKMVVNGHAGY
Trigger: ATAACCGGCATGGCCATTGACAACCATCTTCTGGCACTGAGGGAGCTGGCCCGAGACCTGTGCAAAGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 72 bp TTTCTCTGCCGAGGAGGCGAGATGGCCTTGAGTTTCTaGGGAACATTTCCACCTCAGCCTTCTGGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: FLCRGGEMALSF*GTFPPQPSGSR
Trigger: CCTGCTCCCAGAAGGCTGAGGTGGAAATGTTCCCCAGAAACTCAAGGCCATCTCGCCTCCTCGGCAGAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 72 bp CTTCCTGGAAGCGGCGGATGGATGCACTCTCATAGGTaGGCACCAGCCTCTGGTAAAGCCTGTAGTAAGCCA +
Preference number: 6 (lower is better)
Translates to: LPGSGGWMHSHR*APASGKACSKP
Trigger: TGGCTTACTACAGGCTTTACCAGAGGCTGGTGCCCACCTATGAGAGTGCATCCATCCGCCGCTTCCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 72 bp AGCAGCTGCAGTTTCTCAGAAGCCAGCACGGCAGCCTaGTGGTCAGTCATGGCTTGCACAAAAGCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: SSCSFSEASTAA*WSVMACTKARA
Trigger: GGCTCTGGCTTTTGTGCAAGCCATGACTGACCACAAGGCTGCCGTGCTGGCTTCTGAGAAACTGCAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 90 bp CAGTTTCTCAGAAGCCAGCACGGCAGCCTTGTGGTCAGTCATGGCTaGCACAAAAGCCAGAGCCTCAGGAGTGGCCGATCTGATGTTGTC +
Preference number: 6 (lower is better)
Translates to: QFLRSQHGSLVVSHG*HKSQSLRSGRSDVV
Trigger: GACAACATCAGATCGGCCACTCCTGAGGCTCTGGCTTTTGTGCAAGCCATGACTGACCACAAGGCTGCCGTGCTGGCTTCTGAGAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS TCA 72 bp AAGGCTCGCTCCCACCGCTTCTGCAAACTCCACAGATaGGGTCTCTTTGCAGCCGTGAAAGCTGGAGATGCA +
Preference number: 6 (lower is better)
Translates to: KARSHRFCKLHR*GLFAAVKAGDA
Trigger: TGCATCTCCAGCTTTCACGGCTGCAAAGAGACCTCATCTGTGGAGTTTGCAGAAGCGGTGGGAGCGAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 72 bp AAGACAAAGAACTGGTTGCAGCAGGCCACGATGACATaGTCGGGCTCAGGCATGATACTGCTCTTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: KTKNWLQQATMT*SGSGMILLFWA
Trigger: GGCCCAGAAGAGCAGTATCATGCCTGAGCCCGAGCATGTCATCGTGGCCTGCTGCAACCAGTTCTTTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS GCA 72 bp ATTGCTTGGCTTGGTTGGGCCTCTAGCTCTTTCCTTTaGTGTTGGTGGCTTGCCTTCAGCAGGCTGCCTCGA +
Preference number: 6 (lower is better)
Translates to: IAWLGWASSSFL*CWWLAFSRLPR
Trigger: TCGAGGCAGCCTGCTGAAGGCAAGCCACCAACAGCAAAGGAAAGAGCTAGAGGCCCAACCAAGCCAAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 72 bp GGCATGATACTGCTCTTCTGGGCCACCAGTGTGTCCTaGGTATGGCCAGGAAGCCGGTATGATGAGAAGAGT +
Preference number: 6 (lower is better)
Translates to: GMILLFWATSVS*VWPGSRYDEKS
Trigger: ACTCTTCTCATCATACCGGCTTCCTGGCCATACCCAGGACACACTGGTGGCCCAGAAGAGCAGTATCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS CCA 72 bp AGCTGCAGTTTCTCAGAAGCCAGCACGGCAGCCTTGTaGTCAGTCATGGCTTGCACAAAAGCCAGAGCCTCA +
Preference number: 6 (lower is better)
Translates to: SCSFSEASTAAL*SVMACTKARAS
Trigger: TGAGGCTCTGGCTTTTGTGCAAGCCATGACTGACCACAAGGCTGCCGTGCTGGCTTCTGAGAAACTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 72 bp TGGCTTGGTTGGGCCTCTAGCTCTTTCCTTTGCTGTTaGTGGCTTGCCTTCAGCAGGCTGCCTCGAACTACA +
Preference number: 6 (lower is better)
Translates to: WLGWASSSFLCC*WLAFSRLPRTT
Trigger: TGTAGTTCGAGGCAGCCTGCTGAAGGCAAGCCACCAACAGCAAAGGAAAGAGCTAGAGGCCCAACCAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 72 bp GTTGGGCCTCTAGCTCTTTCCTTTGCTGTTGGTGGCTaGCCTTCAGCAGGCTGCCTCGAACTACAGAGGTCT +
Preference number: 6 (lower is better)
Translates to: VGPLALSFAVGG*PSAGCLELQRS
Trigger: AGACCTCTGTAGTTCGAGGCAGCCTGCTGAAGGCAAGCCACCAACAGCAAAGGAAAGAGCTAGAGGCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 90 bp TCTTTGCACAGGTCTCGGGCCAGCTCCCTCAGTGCCAGAAGATGGTaGTCAATGGCCATGCCGGTTATGGCCATGACTGTGTACTCAGTT +
Preference number: 6 (lower is better)
Translates to: SLHRSRASSLSARRW*SMAMPVMAMTVYSV
Trigger: AACTGAGTACACAGTCATGGCCATAACCGGCATGGCCATTGACAACCATCTTCTGGCACTGAGGGAGCTGGCCCGAGACCTGTGCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS TCA 72 bp GAAGATGGTTGTCAATGGCCATGCCGGTTATGGCCATaGCTGTGTACTCAGTTTGGGCCTGGATGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: EDGCQWPCRLWP*LCTQFGPGWPS
Trigger: AGAGGGCCATCCAGGCCCAAACTGAGTACACAGTCATGGCCATAACCGGCATGGCCATTGACAACCATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 72 bp AGGCTGGCTGCAAACCTTAGCTGGTCATTGGTGTCTTaGAAGTGCTGCCGAGCAAAGATCACAGCAGGGCTA +
Preference number: 6 (lower is better)
Translates to: RLAANLSWSLVS*KCCRAKITAGL
Trigger: TAGCCCTGCTGTGATCTTTGCTCGGCAGCACTTCCAAGACACCAATGACCAGCTAAGGTTTGCAGCCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS CCA 72 bp CTTGAGTTTCTGGGGAACATTTCCACCTCAGCCTTCTaGGAGCAGGGAGTTCACTCACTGAGTCAGCTCGGA +
Preference number: 6 (lower is better)
Translates to: LEFLGNISTSAF*EQGVHSLSQLG
Trigger: TCCGAGCTGACTCAGTGAGTGAACTCCCTGCTCCCAGAAGGCTGAGGTGGAAATGTTCCCCAGAAACTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CCA 72 bp CCTCAGGCTGGGGGTTATAACAGGCTCCATACCCATTaGGTACCACAGGGCCATAACAGCAGAACATCTCCA +
Preference number: 6 (lower is better)
Translates to: PQAGGYNRLHTH*VPQGHNSRTSP
Trigger: TGGAGATGTTCTGCTGTTATGGCCCTGTGGTACCCAATGGGTATGGAGCCTGTTATAACCCCCAGCCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 72 bp AGGTATGTTTCATCCATGAACATCTCAGGTGGCTCTTaGCACAGGTCTCGGGCCAGCTCCCTCAGTGCCAGA +
Preference number: 6 (lower is better)
Translates to: RYVSSMNISGGS*HRSRASSLSAR
Trigger: TCTGGCACTGAGGGAGCTGGCCCGAGACCTGTGCAAAGAGCCACCTGAGATGTTCATGGATGAAACATACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 90 bp GTGTCTTGGAAGTGCTGCCGAGCAAAGATCACAGCAGGGCTAGAGTaGACTGGCAGGGCCAGGCGGTTGTTTAGATACATGTCATTCAGC +
Preference number: 6 (lower is better)
Translates to: VSWKCCRAKITAGLE*TGRARRLFRYMSFS
Trigger: GCTGAATGACATGTATCTAAACAACCGCCTGGCCCTGCCAGTCAACTCTAGCCCTGCTGTGATCTTTGCTCGGCAGCACTTCCAAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS GCA 72 bp GCTGCAAACCTTAGCTGGTCATTGGTGTCTTGGAAGTaGTGCCGAGCAAAGATCACAGCAGGGCTAGAGTTG +
Preference number: 6 (lower is better)
Translates to: AANLSWSLVSWK*CRAKITAGLEL
Trigger: CAACTCTAGCCCTGCTGTGATCTTTGCTCGGCAGCACTTCCAAGACACCAATGACCAGCTAAGGTTTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS GCA 72 bp GTTCACTCACTGAGTCAGCTCGGACGAGCTTCTTGTTaGCTGTCATCATATGTTTCAGCAGGTGCTCCGTGC +
Preference number: 6 (lower is better)
Translates to: VHSLSQLGRASC*LSSYVSAGAPC
Trigger: GCACGGAGCACCTGCTGAAACATATGATGACAGGCAACAAGAAGCTCGTCCGAGCTGACTCAGTGAGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 72 bp CTTTCCTTTGCTGTTGGTGGCTTGCCTTCAGCAGGCTaGCTCGAACTACAGAGGTCTCTCATGTCAACAAGG +
Preference number: 6 (lower is better)
Translates to: LSFAVGGLPSAG*LELQRSLMSTR
Trigger: CCTTGTTGACATGAGAGACCTCTGTAGTTCGAGGCAGCCTGCTGAAGGCAAGCCACCAACAGCAAAGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 90 bp CTTTACGATTCTTTGAAGTTTCTCTGCCGAGGAGGCGAGATGGCCTaGAGTTTCTGGGGAACATTTCCACCTCAGCCTTCTGGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: LYDSLKFLCRGGEMA*SFWGTFPPQPSGSR
Trigger: CCTGCTCCCAGAAGGCTGAGGTGGAAATGTTCCCCAGAAACTCAAGGCCATCTCGCCTCCTCGGCAGAGAAACTTCAAAGAATCGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 90 bp TTGCTCATCAGGTATGTTTCATCCATGAACATCTCAGGTGGCTCTTaGCACAGGTCTCGGGCCAGCTCCCTCAGTGCCAGAAGATGGTTG +
Preference number: 6 (lower is better)
Translates to: LLIRYVSSMNISGGS*HRSRASSLSARRWL
Trigger: CAACCATCTTCTGGCACTGAGGGAGCTGGCCCGAGACCTGTGCAAAGAGCCACCTGAGATGTTCATGGATGAAACATACCTGATGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 90 bp CTGAGACGGCGGAAATTAATGACAACATCCAAGACAAAGAACTGGTaGCAGCAGGCCACGATGACATGCTCGGGCTCAGGCATGATACTG +
Preference number: 6 (lower is better)
Translates to: LRRRKLMTTSKTKNW*QQATMTCSGSGMIL
Trigger: CAGTATCATGCCTGAGCCCGAGCATGTCATCGTGGCCTGCTGCAACCAGTTCTTTGTCTTGGATGTTGTCATTAATTTCCGCCGTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS CAA 90 bp ATCTCCATGGTCGTGGGCACCTGGCTGGTGGAGAGAATAAACCGGTaGCTCATCAGGTATGTTTCATCCATGAACATCTCAGGTGGCTCT +
Preference number: 6 (lower is better)
Translates to: ISMVVGTWLVERINR*LIRYVSSMNISGGS
Trigger: AGAGCCACCTGAGATGTTCATGGATGAAACATACCTGATGAGCAACCGGTTTATTCTCTCCACCAGCCAGGTGCCCACGACCATGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 72 bp ACAGCAGGGCTAGAGTTGACTGGCAGGGCCAGGCGGTaGTTTAGATACATGTCATTCAGCCAGTATTCAGAG +
Preference number: 6 (lower is better)
Translates to: TAGLELTGRARR*FRYMSFSQYSE
Trigger: CTCTGAATACTGGCTGAATGACATGTATCTAAACAACCGCCTGGCCCTGCCAGTCAACTCTAGCCCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS CAA 72 bp TCTTTGAAGTTTCTCTGCCGAGGAGGCGAGATGGCCTaGAGTTTCTGGGGAACATTTCCACCTCAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: SLKFLCRGGEMA*SFWGTFPPQPS
Trigger: AGAAGGCTGAGGTGGAAATGTTCCCCAGAAACTCAAGGCCATCTCGCCTCCTCGGCAGAGAAACTTCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS CAA 90 bp GCAAAGATCACAGCAGGGCTAGAGTTGACTGGCAGGGCCAGGCGGTaGTTTAGATACATGTCATTCAGCCAGTATTCAGAGACCCAATTG +
Preference number: 6 (lower is better)
Translates to: AKITAGLELTGRARR*FRYMSFSQYSETQL
Trigger: CAATTGGGTCTCTGAATACTGGCTGAATGACATGTATCTAAACAACCGCCTGGCCCTGCCAGTCAACTCTAGCCCTGCTGTGATCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070125.6
ENSMUST00000226365.2
ENSMUST00000227579.2
CDS GCA 72 bp AGCTTCTTGTTGCCTGTCATCATATGTTTCAGCAGGTaGTCCGTGCACTGCACCAGGACGATGCCATCAAAA +
Preference number: 6 (lower is better)
Translates to: SFLLPVIICFSR*SVHCTRTMPSK
Trigger: TTTTGATGGCATCGTCCTGGTGCAGTGCACGGAGCACCTGCTGAAACATATGATGACAGGCAACAAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS TCA 72 bp TCCTCGTTGGACGCCATTTTGACTATCTTTCTCAACTaGGTGAACAGATCACCCTCACTGAGACGGCGGAAA +
Preference number: 6 (lower is better)
Translates to: SSLDAILTIFLN*VNRSPSLRRRK
Trigger: TTTCCGCCGTCTCAGTGAGGGTGATCTGTTCACTCAGTTGAGAAAGATAGTCAAAATGGCGTCCAACGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6
CDS GCA 72 bp GAAATCCAGATTCTTTACGATTCTTTGAAGTTTCTCTaGCGAGGAGGCGAGATGGCCTTGAGTTTCTGGGGA +
Preference number: 6 (lower is better)
Translates to: EIQILYDSLKFL*RGGEMALSFWG
Trigger: TCCCCAGAAACTCAAGGCCATCTCGCCTCCTCGGCAGAGAAACTTCAAAGAATCGTAAAGAATCTGGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070125.6