RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHAF1A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002835

Ensembl transcript IDs: ENSMUST00000002914.10, ENSMUST00000232828.2

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACGGGCGCAGCCGCAGAACCTGGCGCGGCACAAGCAGCAGCTGTTaGATGCCGAGCCTGTGCGGGCCACTCTGGATCGGCAGCTCCGAG +
Preference number: 1 (lower is better)
Translates to: HGRSRRTWRGTSSSC*MPSLCGPLWIGSSE
Trigger: CTCGGAGCTGCCGATCCAGAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGTTCTGCGGCTGCGCCCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 90 bp AGAACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTaGGGGCCACTCTGGATCGGCAGCTCCGAGTCTTCCGCCCCTCGG +
Preference number: 1 (lower is better)
Translates to: RTWRGTSSSCWMPSL*GPLWIGSSESSAPR
Trigger: CCGAGGGGCGGAAGACTCGGAGCTGCCGATCCAGAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 90 bp GGCGCAGCCGCAGAACCTGGCGCGGCACAAGCAGCAGCTGTTGGATaGCGAGCCTGTGCGGGCCACTCTGGATCGGCAGCTCCGAGTCTT +
Preference number: 1 (lower is better)
Translates to: GAAAEPGAAQAAAVG*RACAGHSGSAAPSL
Trigger: AAGACTCGGAGCTGCCGATCCAGAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGTTCTGCGGCTGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 90 bp GGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCTaGATCGGCAGCTCCGAGTCTTCCGCCCCTCGGCTCTGGCCTCAC +
Preference number: 1 (lower is better)
Translates to: GTSSSCWMPSLCGPL*IGSSESSAPRLWPH
Trigger: GTGAGGCCAGAGCCGAGGGGCGGAAGACTCGGAGCTGCCGATCCAGAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 90 bp AGTTCTACGTTCTGGGTGAGGATGCACGGGCGCAGCCGCAGAACCTaGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGG +
Preference number: 1 (lower is better)
Translates to: SSTFWVRMHGRSRRT*RGTSSSCWMPSLCG
Trigger: CCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGTTCTGCGGCTGCGCCCGTGCATCCTCACCCAGAACGTAGAACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 90 bp ACAGCTGTGATGCCTCTACAGAGGGCCAGGAGGAGTTCTACGTTCTaGGTGAGGATGCACGGGCGCAGCCGCAGAACCTGGCGCGGCACA +
Preference number: 1 (lower is better)
Translates to: TAVMPLQRARRSSTF*VRMHGRSRRTWRGT
Trigger: TGTGCCGCGCCAGGTTCTGCGGCTGCGCCCGTGCATCCTCACCCAGAACGTAGAACTCCTCCTGGCCCTCTGTAGAGGCATCACAGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 90 bp CTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTGGCTGCCCTTTaGGCTGAGGGCCTCCGGTGGACAGAAGCTGGAGGAGAACGAGGC +
Preference number: 1 (lower is better)
Translates to: LPICARGATERLAAL*AEGLRWTEAGGERG
Trigger: GCCTCGTTCTCCTCCAGCTTCTGTCCACCGGAGGCCCTCAGCTCAAAGGGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 90 bp CCTCTGTGGGCTGCAAGGGACAGGCTTGTCCTGGCTTGCGGTGTGTaGAGCCTTAGCCCTCTGGTGCCATCTTGGAGTGCAGCACAGGTG +
Preference number: 1 (lower is better)
Translates to: PLWAARDRLVLACGV*SLSPLVPSWSAAQV
Trigger: CACCTGTGCTGCACTCCAAGATGGCACCAGAGGGCTAAGGCTCCACACACCGCAAGCCAGGACAAGCCTGTCCCTTGCAGCCCACAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 90 bp CTATCCGCGCTCTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTaGCTGCCCTTTGAGCTGAGGGCCTCCGGTGGACAGAAGCTGGAG +
Preference number: 1 (lower is better)
Translates to: LSALFRFVREALQND*LPFELRASGGQKLE
Trigger: CTCCAGCTTCTGTCCACCGGAGGCCCTCAGCTCAAAGGGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGATAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 90 bp GCTTCGCAAGTATACCTATGCCCTTGTGCGCGTGCGCCTGCCAGATaGCTGTCTACTGCAAGGTGTGTGACCACCCCAGCCCAGGGTGGG +
Preference number: 1 (lower is better)
Translates to: ASQVYLCPCARAPAR*LSTARCVTTPAQGG
Trigger: CCCACCCTGGGCTGGGGTGGTCACACACCTTGCAGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 90 bp CTTGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTGCAAGGTGTGTaGCCACCCCAGCCCAGGGTGGGTGGTAATCATACTGCACCACCT +
Preference number: 1 (lower is better)
Translates to: LVRVRLPDGCLLQGV*PPQPRVGGNHTAPP
Trigger: AGGTGGTGCAGTATGATTACCACCCACCCTGGGCTGGGGTGGTCACACACCTTGCAGTAGACAGCCATCTGGCAGGCGCACGCGCACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 90 bp AGCGGGAGCTTCGCAAGTATACCTATGCCCTTGTGCGCGTGCGCCTaGCAGATGGCTGTCTACTGCAAGGTGTGTGACCACCCCAGCCCA +
Preference number: 1 (lower is better)
Translates to: SGSFASIPMPLCACA*QMAVYCKVCDHPSP
Trigger: TGGGCTGGGGTGGTCACACACCTTGCAGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGAAGCTCCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 90 bp AGGAGCAGCGGGAGCTTCGCAAGTATACCTATGCCCTTGTGCGCGTaGGCCTGCCAGATGGCTGTCTACTGCAAGGTGTGTGACCACCCC +
Preference number: 1 (lower is better)
Translates to: RSSGSFASIPMPLCA*ACQMAVYCKVCDHP
Trigger: GGGGTGGTCACACACCTTGCAGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGAAGCTCCCGCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 90 bp CATGCGGGAGAAAGAGGAGCAGCGGGAGCTTCGCAAGTATACCTATaGCCTTGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTGCAAGG +
Preference number: 1 (lower is better)
Translates to: HAGERGAAGASQVYL*PCARAPARWLSTAR
Trigger: CCTTGCAGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGAAGCTCCCGCTGCTCCTCTTTCTCCCGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 90 bp ATACCTATGCCCTTGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTaGAAGGTGTGTGACCACCCCAGCCCAGGGTGGGTGGTAATCATA +
Preference number: 1 (lower is better)
Translates to: IPMPLCACACQMAVY*KVCDHPSPGWVVII
Trigger: TATGATTACCACCCACCCTGGGCTGGGGTGGTCACACACCTTGCAGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 90 bp TGTGGAGCCTTAGCCCTCTGGTGCCATCTTGGAGTGCAGCACAGGTaGAATGCACACAGGCTGTGGATGGAGACAGCTGGCAGCATGGAG +
Preference number: 1 (lower is better)
Translates to: CGALALWCHLGVQHR*NAHRLWMETAGSME
Trigger: CTCCATGCTGCCAGCTGTCTCCATCCACAGCCTGTGTGCATTCCACCTGTGCTGCACTCCAAGATGGCACCAGAGGGCTAAGGCTCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 90 bp TGCTTGGCTTCAATCTCAGCAGTGCTGGGTCCTGGCCCTGCAACCTaGGTGACCTGTGTGTGCCTCATCCTCAGGAGCGCATCAACTGTC +
Preference number: 1 (lower is better)
Translates to: CLASISAVLGPGPAT*VTCVCLILRSASTV
Trigger: GACAGTTGATGCGCTCCTGAGGATGAGGCACACACAGGTCACCCAGGTTGCAGGGCCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 90 bp ATGGGGGACGTCATTCCAAGAACCACTCATCAGCTGTTGGGCCAGTaGGAGCTGCTTGGCTTCAATCTCAGCAGTGCTGGGTCCTGGCCC +
Preference number: 1 (lower is better)
Translates to: MGDVIPRTTHQLLGQ*ELLGFNLSSAGSWP
Trigger: GGGCCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAGCTGATGAGTGGTTCTTGGAATGACGTCCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 90 bp CTCCCTCAGCAGCTCTACAAGGCTGAGGGGAAGCACAGCCTCCACTaGCCAGAACATGCCTACTACCAACCTTGCACTTCAGGTGCCTAC +
Preference number: 1 (lower is better)
Translates to: LPQQLYKAEGKHSLH*PEHAYYQPCTSGAY
Trigger: GTAGGCACCTGAAGTGCAAGGTTGGTAGTAGGCATGTTCTGGGCAGTGGAGGCTGTGCTTCCCCTCAGCCTTGTAGAGCTGCTGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 90 bp AGCCTTAGCCCTCTGGTGCCATCTTGGAGTGCAGCACAGGTGGAATaGACACAGGCTGTGGATGGAGACAGCTGGCAGCATGGAGCTGTA +
Preference number: 1 (lower is better)
Translates to: SLSPLVPSWSAAQVE*TQAVDGDSWQHGAV
Trigger: TACAGCTCCATGCTGCCAGCTGTCTCCATCCACAGCCTGTGTGCATTCCACCTGTGCTGCACTCCAAGATGGCACCAGAGGGCTAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 90 bp AGAAAGAGGAGCAGCGGGAGCTTCGCAAGTATACCTATGCCCTTGTaGGCGTGCGCCTGCCAGATGGCTGTCTACTGCAAGGTGTGTGAC +
Preference number: 1 (lower is better)
Translates to: RKRSSGSFASIPMPL*ACACQMAVYCKVCD
Trigger: GTCACACACCTTGCAGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGAAGCTCCCGCTGCTCCTCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 90 bp ACGTCATTCCAAGAACCACTCATCAGCTGTTGGGCCAGTGGGAGCTaGTTGGCTTCAATCTCAGCAGTGCTGGGTCCTGGCCCTGCAACC +
Preference number: 1 (lower is better)
Translates to: TSFQEPLISCWASGS*LASISAVLGPGPAT
Trigger: GGTTGCAGGGCCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAGCTGATGAGTGGTTCTTGGAATGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 90 bp TCTGTCTTGAGGCCTGAGCTGCTTGCAGCCATCGAGCAACTCTCCTaGATAAATGCAGGCTTGGCCCACTGTGGCTCCAGTCTCATGCTG +
Preference number: 1 (lower is better)
Translates to: SVLRPELLAAIEQLS*INAGLAHCGSSLML
Trigger: CAGCATGAGACTGGAGCCACAGTGGGCCAAGCCTGCATTTATTCAGGAGAGTTGCTCGATGGCTGCAAGCAGCTCAGGCCTCAAGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 90 bp CCAATAAATACTCTTTGCCACACAGGACAGAGGCGGTGGAGCGACTaGGCTCACTCAGGACCAAAGCCATGCGGGAGAAAGAGGAGCAGC +
Preference number: 1 (lower is better)
Translates to: PINTLCHTGQRRWSD*AHSGPKPCGRKRSS
Trigger: GCTGCTCCTCTTTCTCCCGCATGGCTTTGGTCCTGAGTGAGCTCAGTCGCTCCACCGCCTCTGTCCTGTGTGGCAAAGAGTATTTATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 90 bp CCTTATGAGGAGAGGGCAGTTCATGGGGCATTAGCTTGGGAGGCCTaGCCAATAAATACTCTTTGCCACACAGGACAGAGGCGGTGGAGC +
Preference number: 1 (lower is better)
Translates to: PYEERAVHGALAWEA*PINTLCHTGQRRWS
Trigger: GCTCCACCGCCTCTGTCCTGTGTGGCAAAGAGTATTTATTGGTCAGGCCTCCCAAGCTAATGCCCCATGAACTGCCCTCTCCTCATAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 90 bp TCCTCAGGAGCGCATCAACTGTCTCGAGGGAAGCCACGAGTTCTTTaGAGCCATTGGCTTCAAGAAGGTCACCCTACCTGTGCCGGATCA +
Preference number: 1 (lower is better)
Translates to: SSGAHQLSRGKPRVL*SHWLQEGHPTCAGS
Trigger: TGATCCGGCACAGGTAGGGTGACCTTCTTGAAGCCAATGGCTTCAAAGAACTCGTGGCTTCCCTCGAGACAGTTGATGCGCTCCTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 90 bp CCTCCACTGCCCAGAACATGCCTACTACCAACCTTGCACTTCAGGTaGCTACACTCCACTACTCCCTGTCACCTAGGTCAATTTCCCCCA +
Preference number: 1 (lower is better)
Translates to: PPLPRTCLLPTLHFR*LHSTTPCHLGQFPP
Trigger: TGGGGGAAATTGACCTAGGTGACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTGCAAGGTTGGTAGTAGGCATGTTCTGGGCAGTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 90 bp AGCCATCGAGCAACTCTCCTGAATAAATGCAGGCTTGGCCCACTGTaGCTCCAGTCTCATGCTGTTCCCAAACCCATTCCTTTCCCTGAG +
Preference number: 1 (lower is better)
Translates to: SHRATLLNKCRLGPL*LQSHAVPKPIPFPE
Trigger: CTCAGGGAAAGGAATGGGTTTGGGAACAGCATGAGACTGGAGCCACAGTGGGCCAAGCCTGCATTTATTCAGGAGAGTTGCTCGATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 90 bp ATTCTATCTGCCTTGCAGGTACCCTCTGCCCTGTTGACCTTCTCCTaGGATGCTTCAGTGTTGGAAGATATAAGGGCAGCAGGAGCTGAG +
Preference number: 1 (lower is better)
Translates to: ILSALQVPSALLTFS*DASVLEDIRAAGAE
Trigger: CTCAGCTCCTGCTGCCCTTATATCTTCCAACACTGAAGCATCCCAGGAGAAGGTCAACAGGGCAGAGGGTACCTGCAAGGCAGATAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 90 bp ACTGTGGCTCCAGTCTCATGCTGTTCCCAAACCCATTCCTTTCCCTaGGTCCCCAGCAATAGGAAGGACAGTAGTAGCAGTAGAGTTGGA +
Preference number: 1 (lower is better)
Translates to: TVAPVSCCSQTHSFP*VPSNRKDSSSSRVG
Trigger: TCCAACTCTACTGCTACTACTGTCCTTCCTATTGCTGGGGACTCAGGGAAAGGAATGGGTTTGGGAACAGCATGAGACTGGAGCCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 90 bp GGGAAGGTACCTTTAAAAAGCCAACTGAAGGGATCTGTATGGTGGTaGAGGTGGCATGGAGACAGGGTCATCATAGGGGTATTGCATCCT +
Preference number: 1 (lower is better)
Translates to: GKVPLKSQLKGSVWW*RWHGDRVIIGVLHP
Trigger: AGGATGCAATACCCCTATGATGACCCTGTCTCCATGCCACCTTCACCACCATACAGATCCCTTCAGTTGGCTTTTTAAAGGTACCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 90 bp CCAGCATTTTGGACCAAATTCCCACTGCCAGGGTGTGTGTGGAGGTaGTGTCACCTTTGGTGGGTTTATTACATTGTCTTAGTGCCTTTG +
Preference number: 1 (lower is better)
Translates to: PAFWTKFPLPGCVWR*CHLWWVYYIVLVPL
Trigger: CAAAGGCACTAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACACACCCTGGCAGTGGGAATTTGGTCCAAAATGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 90 bp TTTTCTACCAGCACCCTAGCAGGCTTGGACTGTGCCCAGGACAAGTaGAAGGACATGCACCAGTGTAATATGATAGTTGAGACAGAAGAC +
Preference number: 1 (lower is better)
Translates to: FSTSTLAGLDCAQDK*KDMHQCNMIVETED
Trigger: GTCTTCTGTCTCAACTATCATATTACACTGGTGCATGTCCTTCCACTTGTCCTGGGCACAGTCCAAGCCTGCTAGGGTGCTGGTAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 90 bp ACCAAATTCCCACTGCCAGGGTGTGTGTGGAGGTGCTGTCACCTTTaGTGGGTTTATTACATTGTCTTAGTGCCTTTGTTTTCATTCTGT +
Preference number: 1 (lower is better)
Translates to: TKFPLPGCVWRCCHL*WVYYIVLVPLFSFC
Trigger: ACAGAATGAAAACAAAGGCACTAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACACACCCTGGCAGTGGGAATTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 90 bp GCACGGGCGCAGCCGCAGAACCTGGCGCGGCACAAGCAGCAGCTGTaGGATGCCGAGCCTGTGCGGGCCACTCTGGATCGGCAGCTCCGA +
Preference number: 2 (lower is better)
Translates to: ARAQPQNLARHKQQL*DAEPVRATLDRQLR
Trigger: TCGGAGCTGCCGATCCAGAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGTTCTGCGGCTGCGCCCGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR TCA 90 bp ACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCACCCATTCCTTTCCCTaGGTCCCCAGCAATAGGAAG +
Preference number: 2 (lower is better)
Translates to: TWRGTSSSCWMPSLCGPLTHSFP*VPSNRK
Trigger: CTTCCTATTGCTGGGGACTCAGGGAAAGGAATGGGT...GAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR GCA 90 bp ACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCCCACTGCCCAGAACATaGCTACTACCAACCTTGCAC +
Preference number: 2 (lower is better)
Translates to: TWRGTSSSCWMPSLCGPLPLPRT*LLPTLH
Trigger: GTGCAAGGTTGGTAGTAGGCATGTTCTGGGCAGTGG...GAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR GCA 90 bp GGGTCTACGACTGAAACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCGCTGGGTCCTGGCCCTaGAACCTGGGTGACCTGTGT +
Preference number: 2 (lower is better)
Translates to: GSTTETQGWRPGSLERPLAGSWP*NLGDLC
Trigger: ACACAGGTCACCCAGGTTGCAGGGCCAGGACCCAGC...GAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CCA 90 bp CTGTTGGGCCAGTGGGAGCTGCTTGGCTTCAATCTCAGCAGTGCTGGGTCCTGGGGAGCAGGCTGTTGCTaGTCTCCATTCCCATCTCCC +
Preference number: 2 (lower is better)
Translates to: LLGQWELLGFNLSSAGSWGAGCC*SPFPSP
Trigger: GGGAGATGGGAATGGAGACCAGCAACAGCCTGCTCC...CCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CCA 90 bp TCCGCGCTCTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTGGCTGCCCTTTTGTGGGCTGGTGAGCTaGGGCTGTGCTCATGAGATC +
Preference number: 2 (lower is better)
Translates to: SALFRFVREALQNDWLPFCGLVS*GCAHEI
Trigger: GATCTCATGAGCACAGCCCCAGCTCACCAGCCCACA...AAAGGGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 90 bp GGGAGAAAGAGGAGCAGCGGGAGCTTCGCAAGTATACCTATGCCCTaGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTGCAAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: GRKRSSGSFASIPMP*CACACQMAVYCKVC
Trigger: ACACACCTTGCAGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGAAGCTCCCGCTGCTCCTCTTTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR TCA 90 bp GGGTCTACGACTGAAACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCTACCCTCTGCCCTGTTaGCCTTCTCCTGGGATGCTT +
Preference number: 2 (lower is better)
Translates to: GSTTETQGWRPGSLERPLYPLPC*PSPGML
Trigger: AAGCATCCCAGGAGAAGGTCAACAGGGCAGAGGGTA...GAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR TCA 90 bp CTGTTGGGCCAGTGGGAGCTGCTTGGCTTCAATCTCAGCAGTGCTGGGTCCTGGGGATCTGTATGGTGGTaGAGGTGGCATGGAGACAGG +
Preference number: 2 (lower is better)
Translates to: LLGQWELLGFNLSSAGSWGSVWW*RWHGDR
Trigger: CCTGTCTCCATGCCACCTTCACCACCATACAGATCC...CCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR GCA 90 bp TGCAAGGTGTGTGACCACCCCAGCCCAGGGTGGGTGGTAATCATACTGCACCACACCTCCTCTGTGGGCTaGAAGGGACAGGCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: CKVCDHPSPGWVVIILHHTSSVG*KGQACP
Trigger: AGGACAAGCCTGTCCCTTGCAGCCCACAGAGGAGGT...GTGGTGCAGTATGATTACCACCCACCCTGGGCTGGGGTGGTCACACACCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR GCA 90 bp CTGTTGGGCCAGTGGGAGCTGCTTGGCTTCAATCTCAGCAGTGCTGGGTCCTGGACCACCTCTAGCTCATaGTCTGTACCCTGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: LLGQWELLGFNLSSAGSWTTSSS*SVPCRD
Trigger: GTCCCTGCAGGGTACAGAGCATGAGCTAGAGGTGGT...CCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR GCA 90 bp GGGTCTACGACTGAAACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCTCAGGACCAAAGCCATaGGGGAGAAAGAGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: GSTTETQGWRPGSLERPLSGPKP*GRKRSS
Trigger: GCTGCTCCTCTTTCTCCCGCATGGCTTTGGTCCTGA...GAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 90 bp TCATTCCAAGAACCACTCATCAGCTGTTGGGCCAGTGGGAGCTGCTaGGCTTCAATCTCAGCAGTGCTGGGTCCTGGCCCTGCAACCTGG +
Preference number: 2 (lower is better)
Translates to: SFQEPLISCWASGSC*ASISAVLGPGPATW
Trigger: CCAGGTTGCAGGGCCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAGCTGATGAGTGGTTCTTGGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR GCA 90 bp GATCGGCAGCTCCGAGTCTTCCGCCCCTCGGCTCTGGCCTCACATTTTGAACTCACCTTGCACTTCAGGTaGCTACACTCCACTACTCCC +
Preference number: 2 (lower is better)
Translates to: DRQLRVFRPSALASHFELTLHFR*LHSTTP
Trigger: GGGAGTAGTGGAGTGTAGGCACCTGAAGTGCAAGGT...GAGTTCAAAATGTGAGGCCAGAGCCGAGGGGCGGAAGACTCGGAGCTGCCGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR GCA 90 bp TGCAAGGTGTGTGACCACCCCAGCCCAGGGTGGGTGGTAATCATACTGCACCACGGGTGTGTGTGGAGGTaGTGTCACCTTTGGTGGGTT +
Preference number: 2 (lower is better)
Translates to: CKVCDHPSPGWVVIILHHGCVWR*CHLWWV
Trigger: AACCCACCAAAGGTGACAGCACCTCCACACACACCC...GTGGTGCAGTATGATTACCACCCACCCTGGGCTGGGGTGGTCACACACCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CCA 90 bp TCGCAAGTATACCTATGCCCTTGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTCACACAGGCTGTGGATaGAGACAGCTGGCAGCATGG +
Preference number: 2 (lower is better)
Translates to: SQVYLCPCARAPARWLSTHTGCG*RQLAAW
Trigger: CCATGCTGCCAGCTGTCTCCATCCACAGCCTGTGTG...AGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 90 bp GGGGAAGCACAGCCTCCACTGCCCAGAACATGCCTACTACCAACCTaGCACTTCAGGTGCCTACACTCCACTACTCCCTGTCACCTAGGT +
Preference number: 2 (lower is better)
Translates to: GEAQPPLPRTCLLPT*HFRCLHSTTPCHLG
Trigger: ACCTAGGTGACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTGCAAGGTTGGTAGTAGGCATGTTCTGGGCAGTGGAGGCTGTGCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR GCA 90 bp TGCAAGGTGTGTGACCACCCCAGCCCAGGGTGGGTGGTAATCATACTGCACCACATACATGTCCACATTTaGCCAGGGCCTGCACAGCAG +
Preference number: 2 (lower is better)
Translates to: CKVCDHPSPGWVVIILHHIHVHI*PGPAQQ
Trigger: CTGCTGTGCAGGCCCTGGGCAAATGTGGACATGTAT...GTGGTGCAGTATGATTACCACCCACCCTGGGCTGGGGTGGTCACACACCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CCA 90 bp ACCTGTGGAGTAGTAGTTCTCCTTCCACCACATGGGTCCGGGAACACAGCCGTCAATGCACACAGGCTGTaGATGGAGACAGCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: TCGVVVLLPPHGSGNTAVNAHRL*METAGS
Trigger: GCTGCCAGCTGTCTCCATCCACAGCCTGTGTGCATT...GACGGCTGTGTTCCCGGACCCATGTGGTGGAAGGAGAACTACTACTCCACAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 90 bp TTCCCTGAGTCCCCAGCAATAGGAAGGACAGTAGTAGCAGTAGAGTaGGAGACAAGGTCCTACCTCCTCTGTGGGCTGCAAGGGACAGGC +
Preference number: 2 (lower is better)
Translates to: FPESPAIGRTVVAVE*ETRSYLLCGLQGTG
Trigger: GCCTGTCCCTTGCAGCCCACAGAGGAGGTAGGACCTTGTCTCCAACTCTACTGCTACTACTGTCCTTCCTATTGCTGGGGACTCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR GCA 90 bp ACCTGTGGAGTAGTAGTTCTCCTTCCACCACATGGGTCCGGGAACACAGCCGTCGTGGCTCCAGTCTCATaGTGTTCCCAAACCCATTCC +
Preference number: 2 (lower is better)
Translates to: TCGVVVLLPPHGSGNTAVVAPVS*CSQTHS
Trigger: GGAATGGGTTTGGGAACAGCATGAGACTGGAGCCAC...GACGGCTGTGTTCCCGGACCCATGTGGTGGAAGGAGAACTACTACTCCACAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR GCA 90 bp AACCTGTGGAGTAGTAGTTCTCCTTCCACCACATGGGTCCGGGAACACAGCCGTCTTGCAGGTACCCTCTaGCCTGTTGACCTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: NLWSSSSPSTTWVREHSRLAGTL*PVDLLL
Trigger: CAGGAGAAGGTCAACAGGGCAGAGGGTACCTGCAAG...ACGGCTGTGTTCCCGGACCCATGTGGTGGAAGGAGAACTACTACTCCACAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR GCA 90 bp TTTGAAGCCATTGGCTTCAAGAAGGTCACCCTACCTGTGCCGGATCAGGGTGAGAGCAGGCTTGGACTGTaGCCAGGACAAGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: FEAIGFKKVTLPVPDQGESRLGL*PGQVEG
Trigger: TCCTTCCACTTGTCCTGGGCACAGTCCAAGCCTGCT...CTCACCCTGATCCGGCACAGGTAGGGTGACCTTCTTGAAGCCAATGGCTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR GCA 90 bp TTTGAAGCCATTGGCTTCAAGAAGGTCACCCTACCTGTGCCGGATCAGGGTGAGCAGATGGCTGTCTACTaGAAGGTGTGTGACCACCCC +
Preference number: 2 (lower is better)
Translates to: FEAIGFKKVTLPVPDQGEQMAVY*KVCDHP
Trigger: GGGGTGGTCACACACCTTGCAGTAGACAGCCATCTG...CTCACCCTGATCCGGCACAGGTAGGGTGACCTTCTTGAAGCCAATGGCTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CCA 90 bp GAGCCGCTTCATGTGTGGAGGAAAGGAAACCTGTGGAGTAGTAGTTCTCCTTCCGCGCTACAGAACGACTaGCTGCCCTTTGAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: EPLHVWRKGNLWSSSSPSALQND*LPFELR
Trigger: CCTCAGCTCAAAGGGCAGCCAGTCGTTCTGTAGCGC...GGAAGGAGAACTACTACTCCACAGGTTTCCTTTCCTCCACACATGAAGCGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CCA 90 bp GAGCCGCTTCATGTGTGGAGGAAAGGAAACCTGTGGAGTAGTAGTTCTCCTTCCGTGGTGAAGGTGGCATaGAGACAGGGTCATCATAGG +
Preference number: 2 (lower is better)
Translates to: EPLHVWRKGNLWSSSSPSVVKVA*RQGHHR
Trigger: CCTATGATGACCCTGTCTCCATGCCACCTTCACCAC...GGAAGGAGAACTACTACTCCACAGGTTTCCTTTCCTCCACACATGAAGCGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CCA 90 bp GCTATCCGCGCTCTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTGGCTGCCTGCTGTCACCTTTGGTaGGTTTATTACATTGTCTTA +
Preference number: 2 (lower is better)
Translates to: AIRALPICARGATERLAACCHLW*VYYIVL
Trigger: TAAGACAATGTAATAAACCCACCAAAGGTGACAGCA...GGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR TCA 90 bp CCAGGGTGTGTGTGGAGGTGCTGTCACCTTTGGTGGGTTTATTACATTGTCTTACCACAGCAAGTGCTGTaGTTAAGGCCCAAGCAGGCA +
Preference number: 2 (lower is better)
Translates to: PGCVWRCCHLWWVYYIVLPQQVL*LRPKQA
Trigger: TGCCTGCTTGGGCCTTAATCACAGCACTTGCTGTGG...TAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACACACCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CCA 90 bp GAGCCGCTTCATGTGTGGAGGAAAGGAAACCTGTGGAGTAGTAGTTCTCCTTCCGTGGATGGAGACAGCTaGCAGCATGGAGCTGTAATT +
Preference number: 2 (lower is better)
Translates to: EPLHVWRKGNLWSSSSPSVDGDS*QHGAVI
Trigger: AATTACAGCTCCATGCTGCCAGCTGTCTCCATCCAC...GGAAGGAGAACTACTACTCCACAGGTTTCCTTTCCTCCACACATGAAGCGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR TCA 90 bp CCAGGGTGTGTGTGGAGGTGCTGTCACCTTTGGTGGGTTTATTACATTGTCTTACAGCAAAATCTGTCTTaGGGCCTGAGCTGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: PGCVWRCCHLWWVYYIVLQQNLS*GLSCLQ
Trigger: CTGCAAGCAGCTCAGGCCTCAAGACAGATTTTGCTG...TAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACACACCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 90 bp AGAAGACAGAGGGCTCAAGTAGAGTATGTTTATACATGTCCACATTaGCCCAGGGCCTGCACAGCAGCCACATCATCCCTAGCACAATTC +
Preference number: 2 (lower is better)
Translates to: RRQRAQVEYVYTCPH*PRACTAATSSLAQF
Trigger: GAATTGTGCTAGGGATGATGTGGCTGCTGTGCAGGCCCTGGGCAAATGTGGACATGTATAAACATACTCTACTTGAGCCCTCTGTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR TCA 90 bp TGTGTGGAGGTGCTGTCACCTTTGGTGGGTTTATTACATTGTCTTAGTGCCTTTAAGGGCAGCAGGAGCTaGGCCAGCAAAATCTGTCTT +
Preference number: 2 (lower is better)
Translates to: CVEVLSPLVGLLHCLSAFKGSRS*ASKICL
Trigger: AAGACAGATTTTGCTGGCTCAGCTCCTGCTGCCCTT...AAAGGCACTAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CCA 90 bp TGTGTGGAGGTGCTGTCACCTTTGGTGGGTTTATTACATTGTCTTAGTGCCTTTTGTGCCCAGGACAAGTaGAAGGACATGCACCAGTGT +
Preference number: 2 (lower is better)
Translates to: CVEVLSPLVGLLHCLSAFCAQDK*KDMHQC
Trigger: ACACTGGTGCATGTCCTTCCACTTGTCCTGGGCACA...AAAGGCACTAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 90 bp GACCAAATTCCCACTGCCAGGGTGTGTGTGGAGGTGCTGTCACCTTaGGTGGGTTTATTACATTGTCTTAGTGCCTTTGTTTTCATTCTG +
Preference number: 2 (lower is better)
Translates to: DQIPTARVCVEVLSP*VGLLHCLSAFVFIL
Trigger: CAGAATGAAAACAAAGGCACTAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACACACCCTGGCAGTGGGAATTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 90 bp ACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCTTTAATTaGAATACTTTTGGGAAGACACCCTCCAAATTTATCCTACAAATG +
Preference number: 2 (lower is better)
Translates to: TQGWRPGSLERPLFN*NTFGKTPSKFILQM
Trigger: CATTTGTAGGATAAATTTGGAGGGTGTCTTCCCAAAAGTATTCAAATTAAAGAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR TCA 90 bp TGTGTGGAGGTGCTGTCACCTTTGGTGGGTTTATTACATTGTCTTAGTGCCTTTGCTTTAGTATCATTCTaGGGTCCCTGGGTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: CVEVLSPLVGLLHCLSAFALVSF*GPWVFL
Trigger: AAGAAACACCCAGGGACCTCAGAATGATACTAAAGC...AAAGGCACTAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp AGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCTaGATCGGCAGCTCCGAGTCTTCCGCCCCTCGGCTC +
Preference number: 3 (lower is better)
Translates to: SSCWMPSLCGPL*IGSSESSAPRL
Trigger: GAGCCGAGGGGCGGAAGACTCGGAGCTGCCGATCCAGAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp CCCTTGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTaGAAGGTGTGTGACCACCCCAGCCCAGGGTGGGTG +
Preference number: 3 (lower is better)
Translates to: PLCACACQMAVY*KVCDHPSPGWV
Trigger: CACCCACCCTGGGCTGGGGTGGTCACACACCTTGCAGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp CGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTaGGGGCCACTCTGGATCGGCAGCTCCGAGTCTTCC +
Preference number: 3 (lower is better)
Translates to: RGTSSSCWMPSL*GPLWIGSSESS
Trigger: GGAAGACTCGGAGCTGCCGATCCAGAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp GCAGAACCTGGCGCGGCACAAGCAGCAGCTGTTGGATaGCGAGCCTGTGCGGGCCACTCTGGATCGGCAGCT +
Preference number: 3 (lower is better)
Translates to: AEPGAAQAAAVG*RACAGHSGSAA
Trigger: AGCTGCCGATCCAGAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGTTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp TTCTGGGTGAGGATGCACGGGCGCAGCCGCAGAACCTaGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGC +
Preference number: 3 (lower is better)
Translates to: FWVRMHGRSRRT*RGTSSSCWMPS
Trigger: GCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGTTCTGCGGCTGCGCCCGTGCATCCTCACCCAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 72 bp TGTGCGCGAGGCGCTACAGAACGACTGGCTGCCCTTTaGGCTGAGGGCCTCCGGTGGACAGAAGCTGGAGGA +
Preference number: 3 (lower is better)
Translates to: CARGATERLAAL*AEGLRWTEAGG
Trigger: TCCTCCAGCTTCTGTCCACCGGAGGCCCTCAGCTCAAAGGGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CAA 90 bp CTGTTGGGCCAGTGGGAGCTGCTTGGCTTCAATCTCAGCAGTGCTGGGTCCTGGCACAAGCAGCAGCTGTaGGATGCCGAGCCTGTGCGG +
Preference number: 3 (lower is better)
Translates to: LLGQWELLGFNLSSAGSWHKQQL*DAEPVR
Trigger: CCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTG...CCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp CTGGGTCCTGGCCCTGCAACCTGGGTGACCTGTGTGTaGCTCATCCTCAGGAGCGCATCAACTGTCTCGAGG +
Preference number: 3 (lower is better)
Translates to: LGPGPATWVTCV*LILRSASTVSR
Trigger: CCTCGAGACAGTTGATGCGCTCCTGAGGATGAGGCACACACAGGTCACCCAGGTTGCAGGGCCAGGACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CAA 90 bp GATCGGCAGCTCCGAGTCTTCCGCCCCTCGGCTCTGGCCTCACATTTTGAACTCCCCTCTGGTGCCATCTaGGAGTGCAGCACAGGTGGA +
Preference number: 3 (lower is better)
Translates to: DRQLRVFRPSALASHFELPSGAI*ECSTGG
Trigger: TCCACCTGTGCTGCACTCCAAGATGGCACCAGAGGG...GAGTTCAAAATGTGAGGCCAGAGCCGAGGGGCGGAAGACTCGGAGCTGCCGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp ATGCCCGGGAGAAGCTATCCGCGCTCTTCCGATTTGTaGGCGAGGCGCTACAGAACGACTGGCTGCCCTTTG +
Preference number: 3 (lower is better)
Translates to: MPGRSYPRSSDL*ARRYRTTGCPL
Trigger: CAAAGGGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGATAGCTTCTCCCGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp TTGAAGCCATTGGCTTCAAGAAGGTCACCCTACCTGTaGCGGATCAGGGTGAGAGGGCGGCCAGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: LKPLASRRSPYL*RIRVRGRPGRW
Trigger: CCACCTGCCTGGCCGCCCTCTCACCCTGATCCGGCACAGGTAGGGTGACCTTCTTGAAGCCAATGGCTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp GCTGCAAGGGACAGGCTTGTCCTGGCTTGCGGTGTGTaGAGCCTTAGCCCTCTGGTGCCATCTTGGAGTGCA +
Preference number: 3 (lower is better)
Translates to: AARDRLVLACGV*SLSPLVPSWSA
Trigger: TGCACTCCAAGATGGCACCAGAGGGCTAAGGCTCCACACACCGCAAGCCAGGACAAGCCTGTCCCTTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp GTATACCTATGCCCTTGTGCGCGTGCGCCTGCCAGATaGCTGTCTACTGCAAGGTGTGTGACCACCCCAGCC +
Preference number: 3 (lower is better)
Translates to: VYLCPCARAPAR*LSTARCVTTPA
Trigger: GGCTGGGGTGGTCACACACCTTGCAGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CAA 90 bp GCTATCCGCGCTCTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTGGCTGCCGGAGGGTCCAGCATTTaGGACCAAATTCCCACTGCC +
Preference number: 3 (lower is better)
Translates to: AIRALPICARGATERLAAGGSSI*DQIPTA
Trigger: GGCAGTGGGAATTTGGTCCAAAATGCTGGACCCTCC...GGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 72 bp GTGCGCCTGCCAGATGGCTGTCTACTGCAAGGTGTGTaGCCACCCCAGCCCAGGGTGGGTGGTAATCATACT +
Preference number: 3 (lower is better)
Translates to: VRLPDGCLLQGV*PPQPRVGGNHT
Trigger: AGTATGATTACCACCCACCCTGGGCTGGGGTGGTCACACACCTTGCAGTAGACAGCCATCTGGCAGGCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp GAAAGAGGAGCAGCGGGAGCTTCGCAAGTATACCTATaGCCTTGTGCGCGTGCGCCTGCCAGATGGCTGTCT +
Preference number: 3 (lower is better)
Translates to: ERGAAGASQVYL*PCARAPARWLS
Trigger: AGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGAAGCTCCCGCTGCTCCTCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp AACCACTCATCAGCTGTTGGGCCAGTGGGAGCTGCTTaGCTTCAATCTCAGCAGTGCTGGGTCCTGGCCCTG +
Preference number: 3 (lower is better)
Translates to: NHSSAVGPVGAA*LQSQQCWVLAL
Trigger: CAGGGCCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAGCTGATGAGTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CAA 90 bp GGGTCTACGACTGAAACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCTGCCTACTACCAACCTaGCACTTCAGGTGCCTACAC +
Preference number: 3 (lower is better)
Translates to: GSTTETQGWRPGSLERPLCLLPT*HFRCLH
Trigger: GTGTAGGCACCTGAAGTGCAAGGTTGGTAGTAGGCA...GAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 72 bp ACTCTTTGCCACACAGGACAGAGGCGGTGGAGCGACTaGGCTCACTCAGGACCAAAGCCATGCGGGAGAAAG +
Preference number: 3 (lower is better)
Translates to: TLCHTGQRRWSD*AHSGPKPCGRK
Trigger: CTTTCTCCCGCATGGCTTTGGTCCTGAGTGAGCTCAGTCGCTCCACCGCCTCTGTCCTGTGTGGCAAAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp TCAGCAGGAGGCTCACTCTGGTGGTTGCTAGTCAGATaGTGCAGGGAGCAGGCTGTTGCTGGTCTCCATTCC +
Preference number: 3 (lower is better)
Translates to: SAGGSLWWLLVR*CREQAVAGLHS
Trigger: GGAATGGAGACCAGCAACAGCCTGCTCCCTGCAGCATCTGACTAGCAACCACCAGAGTGAGCCTCCTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp CCTCTGGTGCCATCTTGGAGTGCAGCACAGGTGGAATaGACACAGGCTGTGGATGGAGACAGCTGGCAGCAT +
Preference number: 3 (lower is better)
Translates to: PLVPSWSAAQVE*TQAVDGDSWQH
Trigger: ATGCTGCCAGCTGTCTCCATCCACAGCCTGTGTGCATTCCACCTGTGCTGCACTCCAAGATGGCACCAGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp TTAGCCCTCTGGTGCCATCTTGGAGTGCAGCACAGGTaGAATGCACACAGGCTGTGGATGGAGACAGCTGGC +
Preference number: 3 (lower is better)
Translates to: LALWCHLGVQHR*NAHRLWMETAG
Trigger: GCCAGCTGTCTCCATCCACAGCCTGTGTGCATTCCACCTGTGCTGCACTCCAAGATGGCACCAGAGGGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp TTGTCCTGGCTTGCGGTGTGTGGAGCCTTAGCCCTCTaGTGCCATCTTGGAGTGCAGCACAGGTGGAATGCA +
Preference number: 3 (lower is better)
Translates to: LSWLAVCGALAL*CHLGVQHRWNA
Trigger: TGCATTCCACCTGTGCTGCACTCCAAGATGGCACCAGAGGGCTAAGGCTCCACACACCGCAAGCCAGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp AGCAGTAGAGTTGGAGACAAGGTCCTACCTCCTCTGTaGGCTGCAAGGGACAGGCTTGTCCTGGCTTGCGGT +
Preference number: 3 (lower is better)
Translates to: SSRVGDKVLPPL*AARDRLVLACG
Trigger: ACCGCAAGCCAGGACAAGCCTGTCCCTTGCAGCCCACAGAGGAGGTAGGACCTTGTCTCCAACTCTACTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CAA 90 bp TCCGCGCTCTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTGGCTGCCCTTTGTAGTAGCAGTAGAGTaGGAGACAAGGTCCTACCTC +
Preference number: 3 (lower is better)
Translates to: SALFRFVREALQNDWLPFVVAVE*ETRSYL
Trigger: GAGGTAGGACCTTGTCTCCAACTCTACTGCTACTAC...AAAGGGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp GTGGTTGCTAGTCAGATGCTGCAGGGAGCAGGCTGTTaGTGGTCTCCATTCCCATCTCCCTCAGCAGCTCTA +
Preference number: 3 (lower is better)
Translates to: VVASQMLQGAGC*WSPFPSPSAAL
Trigger: TAGAGCTGCTGAGGGAGATGGGAATGGAGACCAGCAACAGCCTGCTCCCTGCAGCATCTGACTAGCAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp TCATACTGCACCACCTCTAGCTCATGCTCTGTACCCTaGAGGGACCTTCTATGCCCGGGAGAAGCTATCCGC +
Preference number: 3 (lower is better)
Translates to: SYCTTSSSCSVP*RDLLCPGEAIR
Trigger: GCGGATAGCTTCTCCCGGGCATAGAAGGTCCCTGCAGGGTACAGAGCATGAGCTAGAGGTGGTGCAGTATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp TTCGCAAGTATACCTATGCCCTTGTGCGCGTGCGCCTaGCAGATGGCTGTCTACTGCAAGGTGTGTGACCAC +
Preference number: 3 (lower is better)
Translates to: FASIPMPLCACA*QMAVYCKVCDH
Trigger: GTGGTCACACACCTTGCAGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp AGCCTCCACTGCCCAGAACATGCCTACTACCAACCTTaGACTTCAGGTGCCTACACTCCACTACTCCCTGTC +
Preference number: 3 (lower is better)
Translates to: SLHCPEHAYYQP*TSGAYTPLLPV
Trigger: GACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTGCAAGGTTGGTAGTAGGCATGTTCTGGGCAGTGGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp GCTGCTTGCAGCCATCGAGCAACTCTCCTGAATAAATaGAGGCTTGGCCCACTGTGGCTCCAGTCTCATGCT +
Preference number: 3 (lower is better)
Translates to: AACSHRATLLNK*RLGPLWLQSHA
Trigger: AGCATGAGACTGGAGCCACAGTGGGCCAAGCCTGCATTTATTCAGGAGAGTTGCTCGATGGCTGCAAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp GTTGCTAGTCAGATGCTGCAGGGAGCAGGCTGTTGCTaGTCTCCATTCCCATCTCCCTCAGCAGCTCTACAA +
Preference number: 3 (lower is better)
Translates to: VASQMLQGAGCC*SPFPSPSAALQ
Trigger: TTGTAGAGCTGCTGAGGGAGATGGGAATGGAGACCAGCAACAGCCTGCTCCCTGCAGCATCTGACTAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp TGGGGGACGTCATTCCAAGAACCACTCATCAGCTGTTaGGCCAGTGGGAGCTGCTTGGCTTCAATCTCAGCA +
Preference number: 3 (lower is better)
Translates to: WGTSFQEPLISC*ASGSCLASISA
Trigger: TGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAGCTGATGAGTGGTTCTTGGAATGACGTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp AATGGGAGGGTCCAGCATTTTGGACCAAATTCCCACTaGCAGGGTGTGTGTGGAGGTGCTGTCACCTTTGGT +
Preference number: 3 (lower is better)
Translates to: NGRVQHFGPNSH*QGVCGGAVTFG
Trigger: ACCAAAGGTGACAGCACCTCCACACACACCCTGGCAGTGGGAATTTGGTCCAAAATGCTGGACCCTCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp GCCTTGCAGGTACCCTCTGCCCTGTTGACCTTCTCCTaGGATGCTTCAGTGTTGGAAGATATAAGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: ALQVPSALLTFS*DASVLEDIRAA
Trigger: TGCTGCCCTTATATCTTCCAACACTGAAGCATCCCAGGAGAAGGTCAACAGGGCAGAGGGTACCTGCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp CATGAGCCGCTTCATGTGTGGAGGAAAGGAAACCTGTaGAGTAGTAGTTCTCCTTCCACCACATGGGTCCGG +
Preference number: 3 (lower is better)
Translates to: HEPLHVWRKGNL*SSSSPSTTWVR
Trigger: CCGGACCCATGTGGTGGAAGGAGAACTACTACTCCACAGGTTTCCTTTCCTCCACACATGAAGCGGCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CAA 90 bp TCGCAAGTATACCTATGCCCTTGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTATTCATAGCAGATGTTaGCCCACAGCAAGTGCTGTG +
Preference number: 3 (lower is better)
Translates to: SQVYLCPCARAPARWLSTIHSRC*PTASAV
Trigger: CACAGCACTTGCTGTGGGCAAACATCTGCTATGAAT...AGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 72 bp GAGAGGGCAGTTCATGGGGCATTAGCTTGGGAGGCCTaGCCAATAAATACTCTTTGCCACACAGGACAGAGG +
Preference number: 3 (lower is better)
Translates to: ERAVHGALAWEA*PINTLCHTGQR
Trigger: CCTCTGTCCTGTGTGGCAAAGAGTATTTATTGGTCAGGCCTCCCAAGCTAATGCCCCATGAACTGCCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 72 bp GCGCATCAACTGTCTCGAGGGAAGCCACGAGTTCTTTaGAGCCATTGGCTTCAAGAAGGTCACCCTACCTGT +
Preference number: 3 (lower is better)
Translates to: AHQLSRGKPRVL*SHWLQEGHPTC
Trigger: ACAGGTAGGGTGACCTTCTTGAAGCCAATGGCTTCAAAGAACTCGTGGCTTCCCTCGAGACAGTTGATGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp CCCAGAACATGCCTACTACCAACCTTGCACTTCAGGTaGCTACACTCCACTACTCCCTGTCACCTAGGTCAA +
Preference number: 3 (lower is better)
Translates to: PRTCLLPTLHFR*LHSTTPCHLGQ
Trigger: TTGACCTAGGTGACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTGCAAGGTTGGTAGTAGGCATGTTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp TCAGCCTCCCAGTGTTTCATCAGAGCCATAGCACCATaGCCGTTGAAGGGCTGGCAGTATGAATCTGTCCTA +
Preference number: 3 (lower is better)
Translates to: SASQCFIRAIAP*PLKGWQYESVL
Trigger: TAGGACAGATTCATACTGCCAGCCCTTCAACGGCCATGGTGCTATGGCTCTGATGAAACACTGGGAGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CAA 90 bp AACCTGTGGAGTAGTAGTTCTCCTTCCACCACATGGGTCCGGGAACACAGCCGTCTCTGGCCTCACATTTaGAACTCCCCTCAGATTTCT +
Preference number: 3 (lower is better)
Translates to: NLWSSSSPSTTWVREHSRLWPHI*NSPQIS
Trigger: AGAAATCTGAGGGGAGTTCAAAATGTGAGGCCAGAG...ACGGCTGTGTTCCCGGACCCATGTGGTGGAAGGAGAACTACTACTCCACAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR-3UTR CAA 90 bp GAGCCGCTTCATGTGTGGAGGAAAGGAAACCTGTGGAGTAGTAGTTCTCCTTCCGAAGCCACGAGTTCTTaGAAGCCATTGGCTTCAAGA +
Preference number: 3 (lower is better)
Translates to: EPLHVWRKGNLWSSSSPSEATSS*KPLASR
Trigger: TCTTGAAGCCAATGGCTTCAAAGAACTCGTGGCTTC...GGAAGGAGAACTACTACTCCACAGGTTTCCTTTCCTCCACACATGAAGCGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR GCA 72 bp TGGACCAAATTCCCACTGCCAGGGTGTGTGTGGAGGTaGTGTCACCTTTGGTGGGTTTATTACATTGTCTTA +
Preference number: 3 (lower is better)
Translates to: WTKFPLPGCVWR*CHLWWVYYIVL
Trigger: TAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACACACCCTGGCAGTGGGAATTTGGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 72 bp GGAGACCTGGCTCCCTCGAGAGGCCTCTCTTTAATTTaGATACTTTTGGGAAGACACCCTCCAAATTTATCC +
Preference number: 3 (lower is better)
Translates to: GDLAPSRGLSLI*ILLGRHPPNLS
Trigger: GGATAAATTTGGAGGGTGTCTTCCCAAAAGTATTCAAATTAAAGAGAGGCCTCTCGAGGGAGCCAGGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CCA 72 bp CTGCCAGGGTGTGTGTGGAGGTGCTGTCACCTTTGGTaGGTTTATTACATTGTCTTAGTGCCTTTGTTTTCA +
Preference number: 3 (lower is better)
Translates to: LPGCVWRCCHLW*VYYIVLVPLFS
Trigger: TGAAAACAAAGGCACTAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACACACCCTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR TCA 72 bp AAGACACCCTCCAAATTTATCCTACAAATGCAGACATaGGGCTTGCTTGGTGTAGCCTCTCTAACCACAAAG +
Preference number: 3 (lower is better)
Translates to: KTPSKFILQMQT*GLLGVASLTTK
Trigger: CTTTGTGGTTAGAGAGGCTACACCAAGCAAGCCTCATGTCTGCATTTGTAGGATAAATTTGGAGGGTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp ACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCGGCAACTCTGCAGGCTaGGGTGGAGGGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TWRGTSSSCWMPSLCGPLGNSAG*GGGGAS
Trigger: AGAAGCTCCCCCTCCACCCCAGCCTGCAGAGTTGCC...GAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp ACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCTCCGTGCCTCCTCCTTaGCTCGTCGTATCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TWRGTSSSCWMPSLCGPLSVPPP*LVVSLP
Trigger: GGGAAGAGATACGACGAGCCAAGGAGGAGGCACGGA...GAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp ACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCACTGAGGAAGGTGCTTaGCACACTCTGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TWRGTSSSCWMPSLCGPLTEEGA*HTLLLQ
Trigger: CTGCAGCAGCAGAGTGTGGCAAGCACCTTCCTCAGT...GAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GGGTCTACGACTGAAACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCGGAGGCCCCGGGTTCTaGCTCATCAGGGGATGCCAC +
Preference number: 4 (lower is better)
Translates to: GSTTETQGWRPGSLERPLGGPGF*LIRGCH
Trigger: GTGGCATCCCCTGATGAGCCAGAACCCGGGGCCTCC...GAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR TCA 90 bp ACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCGGCTCCTCTTCCATGTaGCAAGTGATGTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: TWRGTSSSCWMPSLCGPLGSSSM*QVMSEG
Trigger: CCCTTCAGACATCACTTGTCACATGGAAGAGGAGCC...GAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR TCA 90 bp ACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCGGCTTTTTAGGTCACTaGGGAAGGTGCTTGCCACAC +
Preference number: 4 (lower is better)
Translates to: TWRGTSSSCWMPSLCGPLGFLGH*GRCLPH
Trigger: GTGTGGCAAGCACCTTCCTCAGTGACCTAAAAAGCC...GAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp GCTATCCGCGCTCTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTGGCTGCCGGGTCAGCAGGCCCCTaGGGCATTGCTCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: AIRALPICARGATERLAAGSAGP*GIAPGI
Trigger: AATTCCAGGAGCAATGCCGCAGGGGCCTGCTGACCC...GGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 72 bp AGGTCCTACCTCCTCTGTGGGCTGCAAGGGACAGGCTaGTCCTGGCTTGCGGTGTGTGGAGCCTTAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSYLLCGLQGTG*SWLAVCGALAL
Trigger: GAGGGCTAAGGCTCCACACACCGCAAGCCAGGACAAGCCTGTCCCTTGCAGCCCACAGAGGAGGTAGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GCTATCCGCGCTCTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTGGCTGCCCAGCATCCTCCAAGTTaGGCATCTGCAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: AIRALPICARGATERLAAQHPPS*ASAGVG
Trigger: CCCCACACCTGCAGATGCCCAACTTGGAGGATGCTG...GGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 72 bp TCTATGCCCGGGAGAAGCTATCCGCGCTCTTCCGATTaGTGCGCGAGGCGCTACAGAACGACTGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SMPGRSYPRSSD*CARRYRTTGCP
Trigger: AGGGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGATAGCTTCTCCCGGGCATAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 72 bp AGGAGCAGCGGGAGCTTCGCAAGTATACCTATGCCCTaGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: RSSGSFASIPMP*CACACQMAVYC
Trigger: GCAGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGAAGCTCCCGCTGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GGGTCTACGACTGAAACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCAGTGCTCCTGCTGCTTaGCAGCTCCTTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: GSTTETQGWRPGSLERPLSAPAA*QLLPLW
Trigger: CCACAGTGGAAGGAGCTGCCAAGCAGCAGGAGCACT...GAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GATCGGCAGCTCCGAGTCTTCCGCCCCTCGGCTCTGGCCTCACATTTTGAACTCCAGCCTGGCCTTGGATaGCACAGCAACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: DRQLRVFRPSALASHFELQPGLG*HSNSIL
Trigger: GAGGATGCTGTTGCTGTGCCATCCAAGGCCAGGCTG...GAGTTCAAAATGTGAGGCCAGAGCCGAGGGGCGGAAGACTCGGAGCTGCCGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GGGTCTACGACTGAAACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCACTGGCAGGCACTCCTaGCCAAAGCTCTTGAGCACC +
Preference number: 4 (lower is better)
Translates to: GSTTETQGWRPGSLERPLTGRHS*PKLLST
Trigger: GGTGCTCAAGAGCTTTGGCCAGGAGTGCCTGCCAGT...GAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GCTATCCGCGCTCTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTGGCTGCCAGCATAGGTGTGCTCTaGCCAGGCCCCTCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: AIRALPICARGATERLAASIGVL*PGPSVE
Trigger: TTCTACTGAGGGGCCTGGCCAGAGCACACCTATGCT...GGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 72 bp GAACCACTCATCAGCTGTTGGGCCAGTGGGAGCTGCTaGGCTTCAATCTCAGCAGTGCTGGGTCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: EPLISCWASGSC*ASISAVLGPGP
Trigger: AGGGCCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAGCTGATGAGTGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR TCA 90 bp GCTATCCGCGCTCTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTGGCTGCCAGGTATGGGAGCTTCTaGCACGTCACTCCCAACATC +
Preference number: 4 (lower is better)
Translates to: AIRALPICARGATERLAARYGSF*HVTPNI
Trigger: GATGTTGGGAGTGACGTGTCAGAAGCTCCCATACCT...GGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGATAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp TGCAAGGTGTGTGACCACCCCAGCCCAGGGTGGGTGGTAATCATACTGCACCACAGGGTCTTGGGAGCCTaGGGAGTCTTCGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CKVCDHPSPGWVVIILHHRVLGA*GVFGFW
Trigger: CCAGAAACCGAAGACTCCGCAGGCTCCCAAGACCCT...GTGGTGCAGTATGATTACCACCCACCCTGGGCTGGGGTGGTCACACACCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp CTGTTGGGCCAGTGGGAGCTGCTTGGCTTCAATCTCAGCAGTGCTGGGTCCTGGCATACACATCCCACGTaGACAGGCTGCAGCACACGA +
Preference number: 4 (lower is better)
Translates to: LLGQWELLGFNLSSAGSWHTHPT*TGCSTR
Trigger: TCGTGTGCTGCAGCCTGTGCACGTGGGATGTGTATG...CCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GCTATCCGCGCTCTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTGGCTGCCCTCAGGAGAGCTGGTTaGAGAAGAGGAGTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: AIRALPICARGATERLAALRRAG*RRGVGG
Trigger: TCCACCAACTCCTCTTCTCCAACCAGCTCTCCTGAG...GGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGATAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp CTGTTGGGCCAGTGGGAGCTGCTTGGCTTCAATCTCAGCAGTGCTGGGTCCTGGGTCCCTCAGGAGAGCTaGTTGGAGAAGAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LLGQWELLGFNLSSAGSWVPQES*LEKRSW
Trigger: CCAACTCCTCTTCTCCAACCAGCTCTCCTGAGGGAC...CCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp TTTGAAGCCATTGGCTTCAAGAAGGTCACCCTACCTGTGCCGGATCAGGGTGAGCTCTGCAGGCTGGGGTaGAGGGGGAGCTTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FEAIGFKKVTLPVPDQGELCRLG*RGSFSH
Trigger: GTGGGAGAAGCTCCCCCTCCACCCCAGCCTGCAGAG...CTCACCCTGATCCGGCACAGGTAGGGTGACCTTCTTGAAGCCAATGGCTTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GATCGGCAGCTCCGAGTCTTCCGCCCCTCGGCTCTGGCCTCACATTTTGAACTCTCATCCCCCTCACTGTaGGACAAAGACTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: DRQLRVFRPSALASHFELSSPSL*DKDSPG
Trigger: ACCTGGGGAGTCTTTGTCCCACAGTGAGGGGGATGA...GAGTTCAAAATGTGAGGCCAGAGCCGAGGGGCGGAAGACTCGGAGCTGCCGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GGGTCTACGACTGAAACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCTGGGCCAGGATATGCTaGTCCCTCTTTTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GSTTETQGWRPGSLERPLWARIC*SLFSLL
Trigger: CAGGAGGGAAAAGAGGGACCAGCATATCCTGGCCCA...GAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GATCGGCAGCTCCGAGTCTTCCGCCCCTCGGCTCTGGCCTCACATTTTGAACTCGCTTCAGCCTGGCCTTaGATGGCACAGCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: DRQLRVFRPSALASHFELASAWP*MAQQQH
Trigger: ATGCTGTTGCTGTGCCATCCAAGGCCAGGCTGAAGC...GAGTTCAAAATGTGAGGCCAGAGCCGAGGGGCGGAAGACTCGGAGCTGCCGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR TCA 90 bp TCCGCGCTCTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTGGCTGCCCTTTTGGCCGGTGGTTCTCTaGGAACTGCAGAAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SALFRFVREALQNDWLPFWPVVL*ELQKLH
Trigger: ATGAAGCTTCTGCAGTTCTCAGAGAACCACCGGCCA...AAAGGGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR TCA 90 bp ACCTGTGGAGTAGTAGTTCTCCTTCCACCACATGGGTCCGGGAACACAGCCGTCGCAGTTGGCTGCCTCTaGTGCCCATACACATCCCAC +
Preference number: 4 (lower is better)
Translates to: TCGVVVLLPPHGSGNTAVAVGCL*CPYTSH
Trigger: GTGGGATGTGTATGGGCATCAGAGGCAGCCAACTGC...GACGGCTGTGTTCCCGGACCCATGTGGTGGAAGGAGAACTACTACTCCACAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR TCA 90 bp ACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCCATCTGGCACATCTATaGTCATACAGTCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: TWRGTSSSCWMPSLCGPLHLAHL*SYSLCH
Trigger: ATGACACAGACTGTATGATCATAGATGTGCCAGATG...GAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp GGGTCTACGACTGAAACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCGGAGATCCCCTGCCTTaGTCCAGCTTGATAACTCCT +
Preference number: 4 (lower is better)
Translates to: GSTTETQGWRPGSLERPLGDPLP*SSLITP
Trigger: AGGAGTTATCAAGCTGGAGCAAGGCAGGGGATCTCC...GAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp AACCTGTGGAGTAGTAGTTCTCCTTCCACCACATGGGTCCGGGAACACAGCCGTAGTTCTTGGCAACTCTaGAGGCTGGGGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: NLWSSSSPSTTWVREHSRSSWQL*RLGWRG
Trigger: CCCCCTCCACCCCAGCCTGCAGAGTTGCCAAGAACT...ACGGCTGTGTTCCCGGACCCATGTGGTGGAAGGAGAACTACTACTCCACAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp TGCAGCCATCGAGCAACTCTCCTGAATAAATGCAGGCTTGGCCCACTGTGGCTCGTGCTTGCCACACTCTaGTGCTGCAGGAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: CSHRATLLNKCRLGPLWLVLATL*CCRSWS
Trigger: GGACCAGCTCCTGCAGCAGCAGAGTGTGGCAAGCAC...GAGCCACAGTGGGCCAAGCCTGCATTTATTCAGGAGAGTTGCTCGATGGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GCTATCCGCGCTCTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTGGCTGCCTATCCAGGGACATCATaGGAAGAGAGGCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: AIRALPICARGATERLAAYPGTS*EERQWR
Trigger: CCTCCATTGCCTCTCTTCCCATGATGTCCCTGGATA...GGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp TGCAGCCATCGAGCAACTCTCCTGAATAAATGCAGGCTTGGCCCACTGTGGCTCGGGCATCTGCAGGTGTaGGGTGGGACTTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: CSHRATLLNKCRLGPLWLGHLQV*GGTWKG
Trigger: ACCCTTCCAAGTCCCACCCCACACCTGCAGATGCCC...GAGCCACAGTGGGCCAAGCCTGCATTTATTCAGGAGAGTTGCTCGATGGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GGGTCTACGACTGAAACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCAGCACATACGGAAGTTaGGCCGCTTCTCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: GSTTETQGWRPGSLERPLSTYGS*AASHRQ
Trigger: CTGCCTATGAGAAGCGGCCCAACTTCCGTATGTGCT...GAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR TCA 90 bp AGCACAGCCTCCACTGCCCAGAACATGCCTACTACCAACCTTGCACTTCAGGTGCTCCTTCCACTGTGGTaGCCACACCAGCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: STASTAQNMPTTNLALQVLLPLW*PHQQCQ
Trigger: CTGACACTGCTGGTGTGGTCACCACAGTGGAAGGAG...CACCTGAAGTGCAAGGTTGGTAGTAGGCATGTTCTGGGCAGTGGAGGCTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp TGCAGCCATCGAGCAACTCTCCTGAATAAATGCAGGCTTGGCCCACTGTGGCTCAGCTCTGCTGCAGAGTaGTCCTGCTGCTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: CSHRATLLNKCRLGPLWLSSAAE*SCCLAA
Trigger: AGCTGCCAAGCAGCAGGAGCACTCTGCAGCAGAGCT...GAGCCACAGTGGGCCAAGCCTGCATTTATTCAGGAGAGTTGCTCGATGGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp ACTACCAACCTTGCACTTCAGGTGCCTACACTCCACTACTCCCTGTCACCTAGGCTTGCCACACTCTGCTaGTGCAGGAGCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TTNLALQVPTLHYSLSPRLATLC*CRSWSS
Trigger: GCTGGACCAGCTCCTGCAGCAGCAGAGTGTGGCAAG...CCTAGGTGACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTGCAAGGTTGGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp TGCAAGGTGTGTGACCACCCCAGCCCAGGGTGGGTGGTAATCATACTGCACCACAGGCATGCAGTGAACTaGTGCAGCAGCTTCAAGTCG +
Preference number: 4 (lower is better)
Translates to: CKVCDHPSPGWVVIILHHRHAVN*CSSFKS
Trigger: CGACTTGAAGCTGCTGCAGCAGTTCACTGCATGCCT...GTGGTGCAGTATGATTACCACCCACCCTGGGCTGGGGTGGTCACACACCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp CTGTTGGGCCAGTGGGAGCTGCTTGGCTTCAATCTCAGCAGTGCTGGGTCCTGGTGCTCCCATTCACATTaGCATGTAGCAGCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LLGQWELLGFNLSSAGSWCSHSH*HVAAEA
Trigger: TGCTTCCGCTGCTACATGGCAATGTGAATGGGAGCA...CCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp TCGCAAGTATACCTATGCCCTTGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTGCCCTCAGGGCTGTCTaGAATGTCACTGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SQVYLCPCARAPARWLSTALRAV*NVTAVL
Trigger: GAGAACTGCAGTGACATTCCAGACAGCCCTGAGGGC...AGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp TGCAAGGTGTGTGACCACCCCAGCCCAGGGTGGGTGGTAATCATACTGCACCACGCTCTTGAGCACCTCTaGGTGCACATACCAGCACAT +
Preference number: 4 (lower is better)
Translates to: CKVCDHPSPGWVVIILHHALEHL*VHIPAH
Trigger: ATGTGCTGGTATGTGCACCCAGAGGTGCTCAAGAGC...GTGGTGCAGTATGATTACCACCCACCCTGGGCTGGGGTGGTCACACACCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 72 bp CTGGTGAGCTGGGGCTGTGCTCATGAGATCATGCCCTaGGCACTGAATGGGAGGGTCCAGCATTTTGGACCA +
Preference number: 4 (lower is better)
Translates to: LVSWGCAHEIMP*ALNGRVQHFGP
Trigger: TGGTCCAAAATGCTGGACCCTCCCATTCAGTGCCAAGGGCATGATCTCATGAGCACAGCCCCAGCTCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp GATCGGCAGCTCCGAGTCTTCCGCCCCTCGGCTCTGGCCTCACATTTTGAACTCGTAGATCCGGGACTTTaGTTTCCACAGCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: DRQLRVFRPSALASHFELVDPGL*FPQLLL
Trigger: CAAAAGCAGCTGTGGAAAGCAAAGTCCCGGATCTAC...GAGTTCAAAATGTGAGGCCAGAGCCGAGGGGCGGAAGACTCGGAGCTGCCGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp TGCAAGGTGTGTGACCACCCCAGCCCAGGGTGGGTGGTAATCATACTGCACCACTGGTTCTCTGAGAACTaGAGAAGCTTCATGCGGCCA +
Preference number: 4 (lower is better)
Translates to: CKVCDHPSPGWVVIILHHWFSEN*RSFMRP
Trigger: TGGCCGCATGAAGCTTCTGCAGTTCTCAGAGAACCA...GTGGTGCAGTATGATTACCACCCACCCTGGGCTGGGGTGGTCACACACCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp AACCTGTGGAGTAGTAGTTCTCCTTCCACCACATGGGTCCGGGAACACAGCCGTGCACACGAAAGCGCTTaGCCTTGGCTAGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: NLWSSSSPSTTWVREHSRAHESA*PWLGAH
Trigger: ATGAGCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGC...ACGGCTGTGTTCCCGGACCCATGTGGTGGAAGGAGAACTACTACTCCACAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp TGCAGCCATCGAGCAACTCTCCTGAATAAATGCAGGCTTGGCCCACTGTGGCTCTCAAGAAGCTATCAATaGGGCCCTGGCCACCGACCA +
Preference number: 4 (lower is better)
Translates to: CSHRATLLNKCRLGPLWLSRSYQ*GPGHRP
Trigger: TGGTCGGTGGCCAGGGCCCCATTGATAGCTTCTTGA...GAGCCACAGTGGGCCAAGCCTGCATTTATTCAGGAGAGTTGCTCGATGGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp TTTGAAGCCATTGGCTTCAAGAAGGTCACCCTACCTGTGCCGGATCAGGGTGAGCCTCTTTGGGTCTCCTaGACTCCCAGGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FEAIGFKKVTLPVPDQGEPLWVS*TPRLLF
Trigger: GAAGAGGAGCCTGGGAGTCCAGGAGACCCAAAGAGG...CTCACCCTGATCCGGCACAGGTAGGGTGACCTTCTTGAAGCCAATGGCTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp TTTGAAGCCATTGGCTTCAAGAAGGTCACCCTACCTGTGCCGGATCAGGGTGAGATGATGTCTGTGTCATaGCCACAGACCCGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: FEAIGFKKVTLPVPDQGEMMSVS*PQTRVG
Trigger: GCCCACCCGGGTCTGTGGCCATGACACAGACATCAT...CTCACCCTGATCCGGCACAGGTAGGGTGACCTTCTTGAAGCCAATGGCTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp CTGTTGGGCCAGTGGGAGCTGCTTGGCTTCAATCTCAGCAGTGCTGGGTCCTGGTGCTCCTGGAATTCATaGATGATCACCTTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LLGQWELLGFNLSSAGSWCSWNS*MITLLP
Trigger: TGGGAGCAAGGTGATCATCCATGAATTCCAGGAGCA...CCAGGACCCAGCACTGCTGAGATTGAAGCCAAGCAGCTCCCACTGGCCCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp AACCTGTGGAGTAGTAGTTCTCCTTCCACCACATGGGTCCGGGAACACAGCCGTGTGTGGGAGCAGGTATaGGAGCTTCTGACACGTCAC +
Preference number: 4 (lower is better)
Translates to: NLWSSSSPSTTWVREHSRVWEQV*ELLTRH
Trigger: GTGACGTGTCAGAAGCTCCCATACCTGCTCCCACAC...ACGGCTGTGTTCCCGGACCCATGTGGTGGAAGGAGAACTACTACTCCACAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 72 bp GGCATTAGCTTGGGAGGCCTGACCAATAAATACTCTTaGCCACACAGGACAGAGGCGGTGGAGCGACTGAGC +
Preference number: 4 (lower is better)
Translates to: GISLGGLTNKYS*PHRTEAVERLS
Trigger: GCTCAGTCGCTCCACCGCCTCTGTCCTGTGTGGCAAAGAGTATTTATTGGTCAGGCCTCCCAAGCTAATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 72 bp TCCGAGTCTTCCGCCCCTCGGCTCTGGCCTCACATTTaGAACTCCCCTCAGATTTCTTCAGCCTTACAGCTG +
Preference number: 4 (lower is better)
Translates to: SESSAPRLWPHI*NSPQISSALQL
Trigger: CAGCTGTAAGGCTGAAGAAATCTGAGGGGAGTTCAAAATGTGAGGCCAGAGCCGAGGGGCGGAAGACTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR TCA 90 bp GGGTCTACGACTGAAACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCCAGTATTTCACTCTCTaGAGTGACACTCCTATCCAG +
Preference number: 4 (lower is better)
Translates to: GSTTETQGWRPGSLERPLQYFTL*SDTPIQ
Trigger: CTGGATAGGAGTGTCACTTCAGAGAGTGAAATACTG...GAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp GAGCCGCTTCATGTGTGGAGGAAAGGAAACCTGTGGAGTAGTAGTTCTCCTTCCCTCCTTCTTCTTCCGTaGCTCCTCCTTGGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: EPLHVWRKGNLWSSSSPSLLLLP*LLLGSS
Trigger: CGACGAGCCAAGGAGGAGGCACGGAAGAAGAAGGAG...GGAAGGAGAACTACTACTCCACAGGTTTCCTTTCCTCCACACATGAAGCGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp TGCAGCCATCGAGCAACTCTCCTGAATAAATGCAGGCTTGGCCCACTGTGGCTCAACTGGGCCAGGATATaGTGGTCCCTCTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: CSHRATLLNKCRLGPLWLNWARI*WSLFSL
Trigger: GAGGGAAAAGAGGGACCAGCATATCCTGGCCCAGTT...GAGCCACAGTGGGCCAAGCCTGCATTTATTCAGGAGAGTTGCTCGATGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp TCGCAAGTATACCTATGCCCTTGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTATCCTCTTCTGTGTCTaGCTGGAAGCCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: SQVYLCPCARAPARWLSTILFCV*LEAIHV
Trigger: GACATGGATGGCTTCCAGGCAGACACAGAAGAGGAT...AGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp CACTTCAGGTGCCTACACTCCACTACTCCCTGTCACCTAGGTCAATTTCCCCCAGGACTTAGTTCACTGTaGCCCTCAGGGCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: HFRCLHSTTPCHLGQFPPGLSSL*PSGLSG
Trigger: TCCAGACAGCCCTGAGGGCCACAGTGAACTAAGTCC...TGGGGGAAATTGACCTAGGTGACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp TGCAAGGTGTGTGACCACCCCAGCCCAGGGTGGGTGGTAATCATACTGCACCACTTCTGGTGTACTTTGTaGTTCTCAGGGTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: CKVCDHPSPGWVVIILHHFWCTL*FSGSAH
Trigger: GTGTGCAGACCCTGAGAACCACAAAGTACACCAGAA...GTGGTGCAGTATGATTACCACCCACCCTGGGCTGGGGTGGTCACACACCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GGGTCTACGACTGAAACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCTTGGCCTTCAGCTTCTaGTGTACTTTGTGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GSTTETQGWRPGSLERPLLAFSF*CTLWFS
Trigger: TGAGAACCACAAAGTACACCAGAAGCTGAAGGCCAA...GAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp CCAGGGTGTGTGTGGAGGTGCTGTCACCTTTGGTGGGTTTATTACATTGTCTTACCCTCTTTTCCCTCCTaGAGGCCCCGGGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PGCVWRCCHLWWVYYIVLPSFPS*RPRVLA
Trigger: AGCCAGAACCCGGGGCCTCCAGGAGGGAAAAGAGGG...TAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACACACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 72 bp TCTGCCCTGTTGACCTTCTCCTGGGATGCTTCAGTGTaGGAAGATATAAGGGCAGCAGGAGCTGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SALLTFSWDASV*EDIRAAGAEPA
Trigger: TGCTGGCTCAGCTCCTGCTGCCCTTATATCTTCCAACACTGAAGCATCCCAGGAGAAGGTCAACAGGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 72 bp ACTGTCTCGAGGGAAGCCACGAGTTCTTTGAAGCCATaGGCTTCAAGAAGGTCACCCTACCTGTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: TVSREATSSLKP*ASRRSPYLCRI
Trigger: GATCCGGCACAGGTAGGGTGACCTTCTTGAAGCCAATGGCTTCAAAGAACTCGTGGCTTCCCTCGAGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR TCA 90 bp TCGCAAGTATACCTATGCCCTTGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTTCTCTGTGGAGCCTTTaGCAAAGTTCTTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: SQVYLCPCARAPARWLSTSLWSL*QSSWQL
Trigger: GAGTTGCCAAGAACTTTGTCAAAGGCTCCACAGAGA...AGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp CACTTCAGGTGCCTACACTCCACTACTCCCTGTCACCTAGGTCAATTTCCCCCATGTGCAGTTTGCTCCTaGCCTTCTCTGTGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: HFRCLHSTTPCHLGQFPPCAVCS*PSLWSL
Trigger: AAGGCTCCACAGAGAAGGGCAGGAGCAAACTGCACA...TGGGGGAAATTGACCTAGGTGACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp TCGCAAGTATACCTATGCCCTTGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTTGTTCTCTATCTCTGTaGAGTTTGCTCCTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SQVYLCPCARAPARWLSTCSLSL*SLLLPF
Trigger: GAAGGGCAGGAGCAAACTGCACAGAGATAGAGAACA...AGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp AACCTGTGGAGTAGTAGTTCTCCTTCCACCACATGGGTCCGGGAACACAGCCGTTTGGAGAAGAGGAGTTaGTGGAGGAGTGGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: NLWSSSSPSTTWVREHSRLEKRS*WRSGSV
Trigger: TACTGAGCCACTCCTCCACCAACTCCTCTTCTCCAA...ACGGCTGTGTTCCCGGACCCATGTGGTGGAAGGAGAACTACTACTCCACAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp CCAGGGTGTGTGTGGAGGTGCTGTCACCTTTGGTGGGTTTATTACATTGTCTTATGCCACTGTCTTCCCTaGGTGCTGAGGGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: PGCVWRCCHLWWVYYIVLCHCLP*VLRAWW
Trigger: CCACCATGCCCTCAGCACCCAGGGAAGACAGTGGCA...TAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACACACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp CACTTCAGGTGCCTACACTCCACTACTCCCTGTCACCTAGGTCAATTTCCCCCATCTTCTGTGTCTGCCTaGAAGCCATCCATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HFRCLHSTTPCHLGQFPPSSVSA*KPSMSP
Trigger: TGGGGACATGGATGGCTTCCAGGCAGACACAGAAGA...TGGGGGAAATTGACCTAGGTGACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 72 bp AGCGCATCAACTGTCTCGAGGGAAGCCACGAGTTCTTaGAAGCCATTGGCTTCAAGAAGGTCACCCTACCTG +
Preference number: 4 (lower is better)
Translates to: SASTVSREATSS*KPLASRRSPYL
Trigger: CAGGTAGGGTGACCTTCTTGAAGCCAATGGCTTCAAAGAACTCGTGGCTTCCCTCGAGACAGTTGATGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp CACTTCAGGTGCCTACACTCCACTACTCCCTGTCACCTAGGTCAATTTCCCCCATATCTCTGTGCAGTTTaGTCCTGCCCTTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: HFRCLHSTTPCHLGQFPPYLCAV*SCPSLW
Trigger: CCACAGAGAAGGGCAGGAGCAAACTGCACAGAGATA...TGGGGGAAATTGACCTAGGTGACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp ACCTGTGGAGTAGTAGTTCTCCTTCCACCACATGGGTCCGGGAACACAGCCGTCGAATCGAGTGATCTCTaGCTTTTCTGCCTTAATGCG +
Preference number: 4 (lower is better)
Translates to: TCGVVVLLPPHGSGNTAVESSDL*LFCLNA
Trigger: CGCATTAAGGCAGAAAAGGCAGAGATCACTCGATTC...GACGGCTGTGTTCCCGGACCCATGTGGTGGAAGGAGAACTACTACTCCACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR TCA 90 bp ACTACCAACCTTGCACTTCAGGTGCCTACACTCCACTACTCCCTGTCACCTAGGTCTGGAAGAATCGAGTaGTCTCTGCCTTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TTNLALQVPTLHYSLSPRSGRIE*SLPFLP
Trigger: AGGCAGAAAAGGCAGAGATCACTCGATTCTTCCAGA...CCTAGGTGACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTGCAAGGTTGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp CCAGGGTGTGTGTGGAGGTGCTGTCACCTTTGGTGGGTTTATTACATTGTCTTAGAGACACAGCTCTGCTaGAGAGTGCTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PGCVWRCCHLWWVYYIVLETQLC*RVLLLL
Trigger: AAGCAGCAGGAGCACTCTGCAGCAGAGCTGTGTCTC...TAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACACACCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp CCAGGGTGTGTGTGGAGGTGCTGTCACCTTTGGTGGGTTTATTACATTGTCTTATCCAAGTTGGGCATCTaGAGGTGTGGGGTGGGACTT +
Preference number: 4 (lower is better)
Translates to: PGCVWRCCHLWWVYYIVLSKLGI*RCGVGL
Trigger: AAGTCCCACCCCACACCTGCAGATGCCCAACTTGGA...TAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACACACCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR TCA 90 bp TGTGTGGAGGTGCTGTCACCTTTGGTGGGTTTATTACATTGTCTTAGTGCCTTTCCAGCAGGCATGCAGTaGACTGCTGCAGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: CVEVLSPLVGLLHCLSAFPAGMQ*TAAAAS
Trigger: TGAAGCTGCTGCAGCAGTTCACTGCATGCCTGCTGG...AAAGGCACTAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp ACTACCAACCTTGCACTTCAGGTGCCTACACTCCACTACTCCCTGTCACCTAGGGGAGTCTTCGGTTTCTaGAAGAATCGAGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: TTNLALQVPTLHYSLSPRGVFGF*KNRVIS
Trigger: AGAGATCACTCGATTCTTCCAGAAACCGAAGACTCC...CCTAGGTGACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTGCAAGGTTGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CCA 90 bp GAGCCGCTTCATGTGTGGAGGAAAGGAAACCTGTGGAGTAGTAGTTCTCCTTCCTCAGATAAGTACCCATaGGGCACAAAGAAGCCATCG +
Preference number: 4 (lower is better)
Translates to: EPLHVWRKGNLWSSSSPSSDKYP*GTKKPS
Trigger: CGATGGCTTCTTTGTGCCCCATGGGTACTTATCTGA...GGAAGGAGAACTACTACTCCACAGGTTTCCTTTCCTCCACACATGAAGCGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 72 bp AGGGCTCAAGTAGAGTATGTTTATACATGTCCACATTaGCCCAGGGCCTGCACAGCAGCCACATCATCCCTA +
Preference number: 4 (lower is better)
Translates to: RAQVEYVYTCPH*PRACTAATSSL
Trigger: TAGGGATGATGTGGCTGCTGTGCAGGCCCTGGGCAAATGTGGACATGTATAAACATACTCTACTTGAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 72 bp CCCACTGCCAGGGTGTGTGTGGAGGTGCTGTCACCTTaGGTGGGTTTATTACATTGTCTTAGTGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: PTARVCVEVLSP*VGLLHCLSAFV
Trigger: AACAAAGGCACTAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACACACCCTGGCAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR TCA 90 bp GAGCCGCTTCATGTGTGGAGGAAAGGAAACCTGTGGAGTAGTAGTTCTCCTTCCGCACCATGTGTTCTTTaGTTTCAAAGGGGGCAAACT +
Preference number: 4 (lower is better)
Translates to: EPLHVWRKGNLWSSSSPSAPCVL*FQRGQT
Trigger: AGTTTGCCCCCTTTGAAATCAAAGAACACATGGTGC...GGAAGGAGAACTACTACTCCACAGGTTTCCTTTCCTCCACACATGAAGCGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp TCGCAAGTATACCTATGCCCTTGTGCGCGTGCGCCTGCCAGATGGCTGTCTACTACTGGCTTTCAAAAGTaGCCAAAGACAATTGTAGAT +
Preference number: 4 (lower is better)
Translates to: SQVYLCPCARAPARWLSTTGFQK*PKTIVD
Trigger: ATCTACAATTGTCTTTGGGCACTTTTGAAAGCCAGT...AGTAGACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp TGCAGCCATCGAGCAACTCTCCTGAATAAATGCAGGCTTGGCCCACTGTGGCTCTACTGGCTTGATTGTTaGCCTCAAGAAGCTATCAAT +
Preference number: 4 (lower is better)
Translates to: CSHRATLLNKCRLGPLWLYWLDC*PQEAIN
Trigger: ATTGATAGCTTCTTGAGGGCAACAATCAAGCCAGTA...GAGCCACAGTGGGCCAAGCCTGCATTTATTCAGGAGAGTTGCTCGATGGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp CCAGGGTGTGTGTGGAGGTGCTGTCACCTTTGGTGGGTTTATTACATTGTCTTACATGCAGTGAACTGCTaGAGCAGCTTCAAGTCGGAA +
Preference number: 4 (lower is better)
Translates to: PGCVWRCCHLWWVYYIVLHAVNC*SSFKSE
Trigger: TTCCGACTTGAAGCTGCTGCAGCAGTTCACTGCATG...TAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACACACCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR TCA 90 bp TGTGTGGAGGTGCTGTCACCTTTGGTGGGTTTATTACATTGTCTTAGTGCCTTTTGTAGTGAACCAGCCTaGCAGTCACCCGTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: CVEVLSPLVGLLHCLSAFCSEPA*QSPVLF
Trigger: AAAGAGGACGGGTGACTGTCAGGCTGGTTCACTACA...AAAGGCACTAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR GCA 90 bp TGTGTGGAGGTGCTGTCACCTTTGGTGGGTTTATTACATTGTCTTAGTGCCTTTCTTCCTGCCGCTCCTTaGGTTTTTCCTCCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: CVEVLSPLVGLLHCLSAFLPAAP*VFPPLA
Trigger: GGCTAAAGGAGGAAAAACGCAAGGAGCGGCAGGAAG...AAAGGCACTAAGACAATGTAATAAACCCACCAAAGGTGACAGCACCTCCACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
3UTR CAA 72 bp GAGTATAGGGTCTTGACTTTCAAGATCGCAGTAATGTaGGGTCTACGACTGAAACTCAGGGTTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: EYRVLTFKIAVM*GLRLKLRVGDL
Trigger: CAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCCAACATTACTGCGATCTTGAAAGTCAAGACCCTATACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 90 bp AGCGGGCTTGTATTAACCTCTTCACTGGGAACCCGGGTCTGTCTTTaGAATCCACGGCCGCGGCTGTCCGCGTCGCGGCCTCCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SGLVLTSSLGTRVCL*NPRPRLSASRPPAP
Trigger: AGGAGCCGGAGGCCGCGACGCGGACAGCCGCGGCCGTGGATTGCAAAGACAGACCCGGGTTCCCAGTGAAGAGGTTAATACAAGCCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 90 bp GCCAGGCCCCTCAGTAGAAGCACTGCCACTGTCTTCCCTGGGTGCTaGGGGCATGGTGGTGATGTAGGTCCACTGGCAGGGCACTGGCAG +
Preference number: 5 (lower is better)
Translates to: ARPLSRSTATVFPGC*GHGGDVGPLAGHWQ
Trigger: CTGCCAGTGCCCTGCCAGTGGACCTACATCACCACCATGCCCTCAGCACCCAGGGAAGACAGTGGCAGTGCTTCTACTGAGGGGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp ACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCAGGAGATCCCCTGCCTaGCTCCAGCTTGATAACTCC +
Preference number: 5 (lower is better)
Translates to: TWRGTSSSCWMPSLCGPLRRSPA*LQLDNS
Trigger: GGAGTTATCAAGCTGGAGCAAGGCAGGGGATCTCCT...GAGTGGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 90 bp GGATGGCACAGCAACAGCATCCTCCAAGTTGGGCATCTGCAGGTGTaGGGTGGGACTTGGAAGGGTCAGCAGGCCCCTGCGGCATTGCTC +
Preference number: 5 (lower is better)
Translates to: GWHSNSILQVGHLQV*GGTWKGQQAPAALL
Trigger: GAGCAATGCCGCAGGGGCCTGCTGACCCTTCCAAGTCCCACCCCACACCTGCAGATGCCCAACTTGGAGGATGCTGTTGCTGTGCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 90 bp CTAGAACCTGGGGTCAGCTCCGGACAGCTCTGTAGTGAACCAGCCTaGCAGTCACCCGTCCTCTTTGGGTCTCCTGGACTCCCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: LEPGVSSGQLCSEPA*QSPVLFGSPGLPGS
Trigger: GGAGCCTGGGAGTCCAGGAGACCCAAAGAGGACGGGTGACTGTCAGGCTGGTTCACTACAGAGCTGTCCGGAGCTGACCCCAGGTTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 90 bp GCTTCAGCCTGGCCTTGGATGGCACAGCAACAGCATCCTCCAAGTTaGGCATCTGCAGGTGTGGGGTGGGACTTGGAAGGGTCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: ASAWPWMAQQQHPPS*ASAGVGWDLEGSAG
Trigger: GCCTGCTGACCCTTCCAAGTCCCACCCCACACCTGCAGATGCCCAACTTGGAGGATGCTGTTGCTGTGCCATCCAAGGCCAGGCTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 90 bp CAGTTGGCTGCCTCTGATGCCCATACACATCCCACGTGCACAGGCTaGAGCACACGAAAGCGCTTGCCCTTGGCTAGGAGCTCATCCCAC +
Preference number: 5 (lower is better)
Translates to: QLAASDAHTHPTCTG*STRKRLPLARSSSH
Trigger: GTGGGATGAGCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGCTGCAGCCTGTGCACGTGGGATGTGTATGGGCATCAGAGGCAGCCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 90 bp GAACTCGTGCAGTTGGCTGCCTCTGATGCCCATACACATCCCACGTaGACAGGCTGCAGCACACGAAAGCGCTTGCCCTTGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: ELVQLAASDAHTHPT*TGCSTRKRLPLARS
Trigger: GCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGCTGCAGCCTGTGCACGTGGGATGTGTATGGGCATCAGAGGCAGCCAACTGCACGAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 90 bp GGGGTGTGGATGGTCCCTCAGGAGAGCTGGTTGGAGAAGAGGAGTTaGTGGAGGAGTGGCTCAGTATGGAGTCATCCTCGGGGCAGGACT +
Preference number: 5 (lower is better)
Translates to: GVWMVPQESWLEKRS*WRSGSVWSHPRGRT
Trigger: AGTCCTGCCCCGAGGATGACTCCATACTGAGCCACTCCTCCACCAACTCCTCTTCTCCAACCAGCTCTCCTGAGGGACCATCCACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp AGCACAGCCTCCACTGCCCAGAACATGCCTACTACCAACCTTGCACTTCAGGTGGAACCGGCCAGGGTCTaGGGAGCCTGCGGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: STASTAQNMPTTNLALQVEPARV*GACGVF
Trigger: GAAGACTCCGCAGGCTCCCAAGACCCTGGCCGGTTC...CACCTGAAGTGCAAGGTTGGTAGTAGGCATGTTCTGGGCAGTGGAGGCTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp ACTACCAACCTTGCACTTCAGGTGCCTACACTCCACTACTCCCTGTCACCTAGGGGTGTGGGGTGGGACTaGGAAGGGTCAGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: TTNLALQVPTLHYSLSPRGVGWD*EGSAGP
Trigger: GGGGCCTGCTGACCCTTCCAAGTCCCACCCCACACC...CCTAGGTGACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTGCAAGGTTGGTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp GGGTCTACGACTGAAACTCAGGGTTGGAGACCTGGCTCCCTCGAGAGGCCTCTCACAGCATCCTCCAAGTaGGGCATCTGCAGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: GSTTETQGWRPGSLERPLTASSK*GICRCG
Trigger: CCCACACCTGCAGATGCCCAACTTGGAGGATGCTGT...GAGAGGCCTCTCGAGGGAGCCAGGTCTCCAACCCTGAGTTTCAGTCGTAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 90 bp CTGCTGCAGAGTGCTCCTGCTGCTTGGCAGCTCCTTCCACTGTGGTaGCCACACCAGCAGTGTCAGGACTTAGTTCACTGTGGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: LLQSAPAAWQLLPLW*PHQQCQDLVHCGPQ
Trigger: CTGAGGGCCACAGTGAACTAAGTCCTGACACTGCTGGTGTGGTCACCACAGTGGAAGGAGCTGCCAAGCAGCAGGAGCACTCTGCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 90 bp CGGGTTCTGGCTCATCAGGGGATGCCACATCCAGCAGGCATGCAGTaGACTGCTGCAGCAGCTTCAAGTCGGAACTCGTGCAGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: RVLAHQGMPHPAGMQ*TAAAASSRNSCSWL
Trigger: CAGCCAACTGCACGAGTTCCGACTTGAAGCTGCTGCAGCAGTTCACTGCATGCCTGCTGGATGTGGCATCCCCTGATGAGCCAGAACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 90 bp GAAGGGGTCTCTAGGAGACACAGCTCTGCTGCAGAGTGCTCCTGCTaGTTGGCAGCTCCTTCCACTGTGGTGACCACACCAGCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: EGVSRRHSSAAECSC*LAAPSTVVTTPAVS
Trigger: TGACACTGCTGGTGTGGTCACCACAGTGGAAGGAGCTGCCAAGCAGCAGGAGCACTCTGCAGCAGAGCTGTGTCTCCTAGAGACCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 90 bp TCTGAAGGGGTCTCTAGGAGACACAGCTCTGCTGCAGAGTGCTCCTaGTGCTTGGCAGCTCCTTCCACTGTGGTGACCACACCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: SEGVSRRHSSAAECS*CLAAPSTVVTTPAV
Trigger: CACTGCTGGTGTGGTCACCACAGTGGAAGGAGCTGCCAAGCAGCAGGAGCACTCTGCAGCAGAGCTGTGTCTCCTAGAGACCCCTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 90 bp CCCATACACATCCCACGTGCACAGGCTGCAGCACACGAAAGCGCTTaGCCTTGGCTAGGAGCTCATCCCACTCCTTGGCCTTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: PIHIPRAQAAAHESA*PWLGAHPTPWPSAS
Trigger: AGAAGCTGAAGGCCAAGGAGTGGGATGAGCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGCTGCAGCCTGTGCACGTGGGATGTGTATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 90 bp CCATTCACATTGCCATGTAGCAGCGGAAGCAACTGGGCCAGGATATaGTGGTCCCTCTTTTCCCTCCTGGAGGCCCCGGGTTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: PFTLPCSSGSNWARI*WSLFSLLEAPGSGS
Trigger: TGAGCCAGAACCCGGGGCCTCCAGGAGGGAAAAGAGGGACCAGCATATCCTGGCCCAGTTGCTTCCGCTGCTACATGGCAATGTGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 90 bp CACATCCCACGTGCACAGGCTGCAGCACACGAAAGCGCTTGCCCTTaGCTAGGAGCTCATCCCACTCCTTGGCCTTCAGCTTCTGGTGTA +
Preference number: 5 (lower is better)
Translates to: HIPRAQAAAHESACP*LGAHPTPWPSASGV
Trigger: TACACCAGAAGCTGAAGGCCAAGGAGTGGGATGAGCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGCTGCAGCCTGTGCACGTGGGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 90 bp GCAGGGCACTGGCAGGCACTCCTGGCCAAAGCTCTTGAGCACCTCTaGGTGCACATACCAGCACATACGGAAGTTGGGCCGCTTCTCATA +
Preference number: 5 (lower is better)
Translates to: AGHWQALLAKALEHL*VHIPAHTEVGPLLI
Trigger: TATGAGAAGCGGCCCAACTTCCGTATGTGCTGGTATGTGCACCCAGAGGTGCTCAAGAGCTTTGGCCAGGAGTGCCTGCCAGTGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp GATCGGCAGCTCCGAGTCTTCCGCCCCTCGGCTCTGGCCTCACATTTTGAACTCGTTGGAGAAGAGGAGTaGGTGGAGGAGTGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: DRQLRVFRPSALASHFELVGEEE*VEEWLS
Trigger: ACTGAGCCACTCCTCCACCAACTCCTCTTCTCCAAC...GAGTTCAAAATGTGAGGCCAGAGCCGAGGGGCGGAAGACTCGGAGCTGCCGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 90 bp GTGATGTCTGAAGGGGTCTCTAGGAGACACAGCTCTGCTGCAGAGTaGTCCTGCTGCTTGGCAGCTCCTTCCACTGTGGTGACCACACCA +
Preference number: 5 (lower is better)
Translates to: VMSEGVSRRHSSAAE*SCCLAAPSTVVTTP
Trigger: TGGTGTGGTCACCACAGTGGAAGGAGCTGCCAAGCAGCAGGAGCACTCTGCAGCAGAGCTGTGTCTCCTAGAGACCCCTTCAGACATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 90 bp GGCTCATCAGGGGATGCCACATCCAGCAGGCATGCAGTGAACTGCTaGAGCAGCTTCAAGTCGGAACTCGTGCAGTTGGCTGCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: GSSGDATSSRHAVNC*SSFKSELVQLAASD
Trigger: ATCAGAGGCAGCCAACTGCACGAGTTCCGACTTGAAGCTGCTGCAGCAGTTCACTGCATGCCTGCTGGATGTGGCATCCCCTGATGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 90 bp TCTGGCTCATCAGGGGATGCCACATCCAGCAGGCATGCAGTGAACTaGTGCAGCAGCTTCAAGTCGGAACTCGTGCAGTTGGCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: SGSSGDATSSRHAVN*CSSFKSELVQLAAS
Trigger: AGAGGCAGCCAACTGCACGAGTTCCGACTTGAAGCTGCTGCAGCAGTTCACTGCATGCCTGCTGGATGTGGCATCCCCTGATGAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 90 bp TTCACATTGCCATGTAGCAGCGGAAGCAACTGGGCCAGGATATGCTaGTCCCTCTTTTCCCTCCTGGAGGCCCCGGGTTCTGGCTCATCA +
Preference number: 5 (lower is better)
Translates to: FTLPCSSGSNWARIC*SLFSLLEAPGSGSS
Trigger: TGATGAGCCAGAACCCGGGGCCTCCAGGAGGGAAAAGAGGGACCAGCATATCCTGGCCCAGTTGCTTCCGCTGCTACATGGCAATGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 90 bp ATCACCTTGCTCCCATTCACATTGCCATGTAGCAGCGGAAGCAACTaGGCCAGGATATGCTGGTCCCTCTTTTCCCTCCTGGAGGCCCCG +
Preference number: 5 (lower is better)
Translates to: ITLLPFTLPCSSGSN*ARICWSLFSLLEAP
Trigger: CGGGGCCTCCAGGAGGGAAAAGAGGGACCAGCATATCCTGGCCCAGTTGCTTCCGCTGCTACATGGCAATGTGAATGGGAGCAAGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp TGCAAGGTGTGTGACCACCCCAGCCCAGGGTGGGTGGTAATCATACTGCACCACAGCTCATCCCACTCCTaGGCCTTCAGCTTCTGGTGT +
Preference number: 5 (lower is better)
Translates to: CKVCDHPSPGWVVIILHHSSSHS*AFSFWC
Trigger: ACACCAGAAGCTGAAGGCCAAGGAGTGGGATGAGCT...GTGGTGCAGTATGATTACCACCCACCCTGGGCTGGGGTGGTCACACACCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp AGCACAGCCTCCACTGCCCAGAACATGCCTACTACCAACCTTGCACTTCAGGTGCGAAAGCGCTTGCCCTaGGCTAGGAGCTCATCCCAC +
Preference number: 5 (lower is better)
Translates to: STASTAQNMPTTNLALQVRKRLP*ARSSSH
Trigger: GTGGGATGAGCTCCTAGCCAAGGGCAAGCGCTTTCG...CACCTGAAGTGCAAGGTTGGTAGTAGGCATGTTCTGGGCAGTGGAGGCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 90 bp CTCTATCTCTGTGCAGTTTGCTCCTGCCCTTCTCTGTGGAGCCTTTaGCAAAGTTCTTGGCAACTCTGCAGGCTGGGGTGGAGGGGGAGC +
Preference number: 5 (lower is better)
Translates to: LYLCAVCSCPSLWSL*QSSWQLCRLGWRGS
Trigger: GCTCCCCCTCCACCCCAGCCTGCAGAGTTGCCAAGAACTTTGTCAAAGGCTCCACAGAGAAGGGCAGGAGCAAACTGCACAGAGATAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 90 bp GATCCAAGGCAGCTCGGCACCGTGGAGCCAGCACCATGTGTTCTTTaGTTTCAAAGGGGGCAAACTTACCACAGGAACCGGCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: DPRQLGTVEPAPCVL*FQRGQTYHRNRPGS
Trigger: AGACCCTGGCCGGTTCCTGTGGTAAGTTTGCCCCCTTTGAAATCAAAGAACACATGGTGCTGGCTCCACGGTGCCGAGCTGCCTTGGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000002914.10
ENSMUST00000232828.2
CDS CCA 90 bp GCACACGAAAGCGCTTGCCCTTGGCTAGGAGCTCATCCCACTCCTTaGCCTTCAGCTTCTGGTGTACTTTGTGGTTCTCAGGGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: AHESACPWLGAHPTP*PSASGVLCGSQGLH
Trigger: GTGCAGACCCTGAGAACCACAAAGTACACCAGAAGCTGAAGGCCAAGGAGTGGGATGAGCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 90 bp GGGGTGGGACTTGGAAGGGTCAGCAGGCCCCTGCGGCATTGCTCCTaGAATTCATGGATGATCACCTTGCTCCCATTCACATTGCCATGT +
Preference number: 5 (lower is better)
Translates to: GVGLGRVSRPLRHCS*NSWMITLLPFTLPC
Trigger: ACATGGCAATGTGAATGGGAGCAAGGTGATCATCCATGAATTCCAGGAGCAATGCCGCAGGGGCCTGCTGACCCTTCCAAGTCCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp TCCGCGCTCTTCCGATTTGTGCGCGAGGCGCTACAGAACGACTGGCTGCCCTTTACACTCGGTACTGGCTaGATTGTTGCCCTCAAGAAG +
Preference number: 5 (lower is better)
Translates to: SALFRFVREALQNDWLPFTLGTG*IVALKK
Trigger: CTTCTTGAGGGCAACAATCAAGCCAGTACCGAGTGT...AAAGGGCAGCCAGTCGTTCTGTAGCGCCTCGCGCACAAATCGGAAGAGCGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp TGCAGCCATCGAGCAACTCTCCTGAATAAATGCAGGCTTGGCCCACTGTGGCTCCCTCAGGAGAGCTGGTaGGAGAAGAGGAGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: CSHRATLLNKCRLGPLWLPQESW*EKRSWW
Trigger: CCACCAACTCCTCTTCTCCAACCAGCTCTCCTGAGG...GAGCCACAGTGGGCCAAGCCTGCATTTATTCAGGAGAGTTGCTCGATGGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp AACCTGTGGAGTAGTAGTTCTCCTTCCACCACATGGGTCCGGGAACACAGCCGTTCGGAACTCGTGCAGTaGGCTGCCTCTGATGCCCAT +
Preference number: 5 (lower is better)
Translates to: NLWSSSSPSTTWVREHSRSELVQ*AASDAH
Trigger: ATGGGCATCAGAGGCAGCCAACTGCACGAGTTCCGA...ACGGCTGTGTTCCCGGACCCATGTGGTGGAAGGAGAACTACTACTCCACAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp ACTACCAACCTTGCACTTCAGGTGCCTACACTCCACTACTCCCTGTCACCTAGGCGCTTCAGCCTGGCCTaGGATGGCACAGCAACAGCA +
Preference number: 5 (lower is better)
Translates to: TTNLALQVPTLHYSLSPRRFSLA*DGTATA
Trigger: TGCTGTTGCTGTGCCATCCAAGGCCAGGCTGAAGCG...CCTAGGTGACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTGCAAGGTTGGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 90 bp CCCAGTATGCTGGCCGGTGGTTCTCTGAGAACTGCAGAAGCTTCATaGGGCCAAACTTCTTCCTTTCAGACACACCGTCCACCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: PSMLAGGSLRTAEAS*GQTSSFQTHRPPCC
Trigger: GCAGCAAGGTGGACGGTGTGTCTGAAAGGAAGAAGTTTGGCCGCATGAAGCTTCTGCAGTTCTCAGAGAACCACCGGCCAGCATACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 90 bp CAGGAACCGGCCAGGGTCTTGGGAGCCTGCGGAGTCTTCGGTTTCTaGAAGAATCGAGTGATCTCTGCCTTTTCTGCCTTAATGCGCTTC +
Preference number: 5 (lower is better)
Translates to: QEPARVLGACGVFGF*KNRVISAFSALMRF
Trigger: GAAGCGCATTAAGGCAGAAAAGGCAGAGATCACTCGATTCTTCCAGAAACCGAAGACTCCGCAGGCTCCCAAGACCCTGGCCGGTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002914.10
ENSMUST00000232828.2
CDS CCA 90 bp TTGCCCTTGGCTAGGAGCTCATCCCACTCCTTGGCCTTCAGCTTCTaGTGTACTTTGTGGTTCTCAGGGTCTGCACACTCCTCAGTCACG +
Preference number: 5 (lower is better)
Translates to: LPLARSSSHSLAFSF*CTLWFSGSAHSSVT
Trigger: CGTGACTGAGGAGTGTGCAGACCCTGAGAACCACAAAGTACACCAGAAGCTGAAGGCCAAGGAGTGGGATGAGCTCCTAGCCAAGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 90 bp TCTTTGGGTCTCCTGGACTCCCAGGCTCCTCTTCCATGTGACAAGTaGTGTCTGAAGGGGTCTCTAGGAGACACAGCTCTGCTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: SLGLLDSQAPLPCDK*CLKGSLGDTALLQS
Trigger: ACTCTGCAGCAGAGCTGTGTCTCCTAGAGACCCCTTCAGACATCACTTGTCACATGGAAGAGGAGCCTGGGAGTCCAGGAGACCCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 90 bp TTGTTCCACGTCCCCCAGTATGCTGGCCGGTGGTTCTCTGAGAACTaGAGAAGCTTCATGCGGCCAAACTTCTTCCTTTCAGACACACCG +
Preference number: 5 (lower is better)
Translates to: LFHVPQYAGRWFSEN*RSFMRPNFFLSDTP
Trigger: CGGTGTGTCTGAAAGGAAGAAGTTTGGCCGCATGAAGCTTCTGCAGTTCTCAGAGAACCACCGGCCAGCATACTGGGGGACGTGGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 90 bp GTCACTGCAGTTCTCCGTCAGGTCGATAATGACCACACTCGGTACTaGCTTGATTGTTGCCCTCAAGAAGCTATCAATGGGGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: VTAVLRQVDNDHTRY*LDCCPQEAINGALA
Trigger: GGCCAGGGCCCCATTGATAGCTTCTTGAGGGCAACAATCAAGCCAGTACCGAGTGTGGTCATTATCGACCTGACGGAGAACTGCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 90 bp GAGAGCTGGTTGGAGAAGAGGAGTTGGTGGAGGAGTGGCTCAGTATaGAGTCATCCTCGGGGCAGGACTCCAGTATTTCACTCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: ESWLEKRSWWRSGSV*SHPRGRTPVFHSLK
Trigger: CTTCAGAGAGTGAAATACTGGAGTCCTGCCCCGAGGATGACTCCATACTGAGCCACTCCTCCACCAACTCCTCTTCTCCAACCAGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp TGCAAGGTGTGTGACCACCCCAGCCCAGGGTGGGTGGTAATCATACTGCACCACTGTAGATCCGGGACTTaGCTTTCCACAGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: CKVCDHPSPGWVVIILHHCRSGT*LSTAAF
Trigger: AAAAGCAGCTGTGGAAAGCAAAGTCCCGGATCTACA...GTGGTGCAGTATGATTACCACCCACCCTGGGCTGGGGTGGTCACACACCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp AGCACAGCCTCCACTGCCCAGAACATGCCTACTACCAACCTTGCACTTCAGGTGCTATCTCTGTGCAGTTaGCTCCTGCCCTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: STASTAQNMPTTNLALQVLSLCS*LLPFSV
Trigger: CACAGAGAAGGGCAGGAGCAAACTGCACAGAGATAG...CACCTGAAGTGCAAGGTTGGTAGTAGGCATGTTCTGGGCAGTGGAGGCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 90 bp AGGAGCTCATCCCACTCCTTGGCCTTCAGCTTCTGGTGTACTTTGTaGTTCTCAGGGTCTGCACACTCCTCAGTCACGCCTTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: RSSSHSLAFSFWCTL*FSGSAHSSVTPSSS
Trigger: TGAAGATGAAGGCGTGACTGAGGAGTGTGCAGACCCTGAGAACCACAAAGTACACCAGAAGCTGAAGGCCAAGGAGTGGGATGAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 90 bp TGTCTTCTTGTTCCACGTCCCCCAGTATGCTGGCCGGTGGTTCTCTaGGAACTGCAGAAGCTTCATGCGGCCAAACTTCTTCCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: CLLVPRPPVCWPVVL*ELQKLHAAKLLPFR
Trigger: TCTGAAAGGAAGAAGTTTGGCCGCATGAAGCTTCTGCAGTTCTCAGAGAACCACCGGCCAGCATACTGGGGGACGTGGAACAAGAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS-3UTR CAA 90 bp TGCAGCCATCGAGCAACTCTCCTGAATAAATGCAGGCTTGGCCCACTGTGGCTCTCATGGATGATCACCTaGCTCCCATTCACATTGCCA +
Preference number: 5 (lower is better)
Translates to: CSHRATLLNKCRLGPLWLSWMIT*LPFTLP
Trigger: TGGCAATGTGAATGGGAGCAAGGTGATCATCCATGA...GAGCCACAGTGGGCCAAGCCTGCATTTATTCAGGAGAGTTGCTCGATGGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 90 bp ATGTGTCTTCCTCAACTTTCTCCTTGGGAACAAGGTTCAGGCGTTTaGAGGGCAAGCGGGCTTGTATTAACCTCTTCACTGGGAACCCGG +
Preference number: 5 (lower is better)
Translates to: MCLPQLSPWEQGSGV*RASGLVLTSSLGTR
Trigger: CCGGGTTCCCAGTGAAGAGGTTAATACAAGCCCGCTTGCCCTTCAAACGCCTGAACCTTGTTCCCAAGGAGAAAGTTGAGGAAGACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 90 bp CAGTATGGAGTCATCCTCGGGGCAGGACTCCAGTATTTCACTCTCTaGAGTGACACTCCTATCCAGGGACATCATGGGAAGAGAGGCAAT +
Preference number: 5 (lower is better)
Translates to: QYGVILGAGLQYFTL*SDTPIQGHHGKRGN
Trigger: ATTGCCTCTCTTCCCATGATGTCCCTGGATAGGAGTGTCACTTCAGAGAGTGAAATACTGGAGTCCTGCCCCGAGGATGACTCCATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 90 bp AGGTGGCATGGAGACAGGGTCATCATAGGGGTATTGCATCCTAGGTaGCATTCTATCTGCCTTGCTGCTCTCCACAATGACCACATCCCT +
Preference number: 5 (lower is better)
Translates to: RWHGDRVIIGVLHPR*HSICLAALHNDHIP
Trigger: AGGGATGTGGTCATTGTGGAGAGCAGCAAGGCAGATAGAATGTCACCTAGGATGCAATACCCCTATGATGACCCTGTCTCCATGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232828.2
CDS-3UTR CAA 90 bp AGCACAGCCTCCACTGCCCAGAACATGCCTACTACCAACCTTGCACTTCAGGTGTTTCCACAGCTGCTTTaGGTGATGTGTCTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: STASTAQNMPTTNLALQVFPQLL*VMCLPQ
Trigger: TTGAGGAAGACACATCACCAAAAGCAGCTGTGGAAA...CACCTGAAGTGCAAGGTTGGTAGTAGGCATGTTCTGGGCAGTGGAGGCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 90 bp GTATGGGAGCTTCTGACACGTCACTCCCAACATCTGGCACATCTATaGTCATACAGTCTGTGTCATCCTCTTCATCCTCTTCTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: VWELLTRHSQHLAHL*SYSLCHPLHPLLCL
Trigger: CAGACACAGAAGAGGATGAAGAGGATGACACAGACTGTATGATCATAGATGTGCCAGATGTTGGGAGTGACGTGTCAGAAGCTCCCATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 90 bp ACTGGCTTTCAAAAGTGCCCAAAGACAATTGTAGATCCGGGACTTTaGTTTCCACAGCTGCTTTTGGTGATGTGTCTTCCTCAACTTTCT +
Preference number: 5 (lower is better)
Translates to: TGFQKCPKTIVDPGL*FPQLLLVMCLPQLS
Trigger: AGAAAGTTGAGGAAGACACATCACCAAAAGCAGCTGTGGAAAGCAAAGTCCCGGATCTACAATTGTCTTTGGGCACTTTTGAAAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp AAGCGGGCTTGTATTAACCTCTTCACTGGGAACCCGGGTCTGTCTTaGCAATCCACGGCCGCGGCTGTCCGCGTCGCGGCCTCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: KRACINLFTGNPGLS*QSTAAAVRVAASGS
Trigger: GGAGCCGGAGGCCGCGACGCGGACAGCCGCGGCCGTGGATTGCAAAGACAGACCCGGGTTCCCAGTGAAGAGGTTAATACAAGCCCGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp CTGCTGCAGGAGCTGGTCCAGCTGATCGCACAGGTCTaGATCCAAGGCAGCTCGGCACCGTGGAGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: LLQELVQLIAQV*IQGSSAPWSQH
Trigger: GTGCTGGCTCCACGGTGCCGAGCTGCCTTGGATCAAGACCTGTGCGATCAGCTGGACCAGCTCCTGCAGCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002914.10
ENSMUST00000232828.2
CDS CCA 72 bp CAGCATCCTCCAAGTTGGGCATCTGCAGGTGTGGGGTaGGACTTGGAAGGGTCAGCAGGCCCCTGCGGCATT +
Preference number: 6 (lower is better)
Translates to: QHPPSWASAGVG*DLEGSAGPCGI
Trigger: AATGCCGCAGGGGCCTGCTGACCCTTCCAAGTCCCACCCCACACCTGCAGATGCCCAACTTGGAGGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp AGCAACAGCATCCTCCAAGTTGGGCATCTGCAGGTGTaGGGTGGGACTTGGAAGGGTCAGCAGGCCCCTGCG +
Preference number: 6 (lower is better)
Translates to: SNSILQVGHLQV*GGTWKGQQAPA
Trigger: CGCAGGGGCCTGCTGACCCTTCCAAGTCCCACCCCACACCTGCAGATGCCCAACTTGGAGGATGCTGTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp CATCCCACGTGCACAGGCTGCAGCACACGAAAGCGCTaGCCCTTGGCTAGGAGCTCATCCCACTCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: HPTCTGCSTRKR*PLARSSSHSLA
Trigger: GGCCAAGGAGTGGGATGAGCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGCTGCAGCCTGTGCACGTGGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp CACACTCTGCTGCTGCAGGAGCTGGTCCAGCTGATCGCACAGGTCTaGATCCAAGGCAGCTCGGCACCGTGGAGCCAGCACCATGTGTTC +
Preference number: 6 (lower is better)
Translates to: HTLLLQELVQLIAQV*IQGSSAPWSQHHVF
Trigger: GAACACATGGTGCTGGCTCCACGGTGCCGAGCTGCCTTGGATCAAGACCTGTGCGATCAGCTGGACCAGCTCCTGCAGCAGCAGAGTGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002914.10
ENSMUST00000232828.2
CDS CAA 90 bp CGCTTCAGCCTGGCCTTGGATGGCACAGCAACAGCATCCTCCAAGTaGGGCATCTGCAGGTGTGGGGTGGGACTTGGAAGGGTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RFSLALDGTATASSK*GICRCGVGLGRVSR
Trigger: CCTGCTGACCCTTCCAAGTCCCACCCCACACCTGCAGATGCCCAACTTGGAGGATGCTGTTGCTGTGCCATCCAAGGCCAGGCTGAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 72 bp GGCAGGGCACTGGCAGGCACTCCTGGCCAAAGCTCTTaGGCACCTCTGGGTGCACATACCAGCACATACGGA +
Preference number: 6 (lower is better)
Translates to: GRALAGTPGQSS*APLGAHTSTYG
Trigger: TCCGTATGTGCTGGTATGTGCACCCAGAGGTGCTCAAGAGCTTTGGCCAGGAGTGCCTGCCAGTGCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp ATCCCACGTGCACAGGCTGCAGCACACGAAAGCGCTTaGCCTTGGCTAGGAGCTCATCCCACTCCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: IPRAQAAAHESA*PWLGAHPTPWP
Trigger: AGGCCAAGGAGTGGGATGAGCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGCTGCAGCCTGTGCACGTGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp GCCTCTGATGCCCATACACATCCCACGTGCACAGGCTaGAGCACACGAAAGCGCTTGCCCTTGGCTAGGAGC +
Preference number: 6 (lower is better)
Translates to: ASDAHTHPTCTG*STRKRLPLARS
Trigger: GCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGCTGCAGCCTGTGCACGTGGGATGTGTATGGGCATCAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp TTGCCATGTAGCAGCGGAAGCAACTGGGCCAGGATATaGTGGTCCCTCTTTTCCCTCCTGGAGGCCCCGGGT +
Preference number: 6 (lower is better)
Translates to: LPCSSGSNWARI*WSLFSLLEAPG
Trigger: ACCCGGGGCCTCCAGGAGGGAAAAGAGGGACCAGCATATCCTGGCCCAGTTGCTTCCGCTGCTACATGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp CGTGCACAGGCTGCAGCACACGAAAGCGCTTGCCCTTaGCTAGGAGCTCATCCCACTCCTTGGCCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: RAQAAAHESACP*LGAHPTPWPSA
Trigger: AGCTGAAGGCCAAGGAGTGGGATGAGCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGCTGCAGCCTGTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp CCATGTAGCAGCGGAAGCAACTGGGCCAGGATATGCTaGTCCCTCTTTTCCCTCCTGGAGGCCCCGGGTTCT +
Preference number: 6 (lower is better)
Translates to: PCSSGSNWARIC*SLFSLLEAPGS
Trigger: AGAACCCGGGGCCTCCAGGAGGGAAAAGAGGGACCAGCATATCCTGGCCCAGTTGCTTCCGCTGCTACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp ACGTGCACAGGCTGCAGCACACGAAAGCGCTTGCCCTaGGCTAGGAGCTCATCCCACTCCTTGGCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: TCTGCSTRKRLP*ARSSSHSLAFS
Trigger: GCTGAAGGCCAAGGAGTGGGATGAGCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGCTGCAGCCTGTGCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp TGGCAGGGCACTGGCAGGCACTCCTGGCCAAAGCTCTaGAGCACCTCTGGGTGCACATACCAGCACATACGG +
Preference number: 6 (lower is better)
Translates to: WQGTGRHSWPKL*STSGCTYQHIR
Trigger: CCGTATGTGCTGGTATGTGCACCCAGAGGTGCTCAAGAGCTTTGGCCAGGAGTGCCTGCCAGTGCCCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp AACTGCGTGATGCACATGGTGGCCGCTGGCTTCCGCTaGAGTAGCATAGGTGTGCTCTGGCCAGGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: NCVMHMVAAGFR*SSIGVLWPGPS
Trigger: TGAGGGGCCTGGCCAGAGCACACCTATGCTACTCAAGCGGAAGCCAGCGGCCACCATGTGCATCACGCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp GGGGTCTCTAGGAGACACAGCTCTGCTGCAGAGTGCTCCTGCTGCTaGGCAGCTCCTTCCACTGTGGTGACCACACCAGCAGTGTCAGGA +
Preference number: 6 (lower is better)
Translates to: GVSRRHSSAAECSCC*AAPSTVVTTPAVSG
Trigger: TCCTGACACTGCTGGTGTGGTCACCACAGTGGAAGGAGCTGCCAAGCAGCAGGAGCACTCTGCAGCAGAGCTGTGTCTCCTAGAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp GCCCATACACATCCCACGTGCACAGGCTGCAGCACACGAAAGCGCTaGCCCTTGGCTAGGAGCTCATCCCACTCCTTGGCCTTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: AHTHPTCTGCSTRKR*PLARSSSHSLAFSF
Trigger: GAAGCTGAAGGCCAAGGAGTGGGATGAGCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGCTGCAGCCTGTGCACGTGGGATGTGTATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 72 bp CTCAGTAGAAGCACTGCCACTGTCTTCCCTGGGTGCTaGGGGCATGGTGGTGATGTAGGTCCACTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: LSRSTATVFPGC*GHGGDVGPLAG
Trigger: CCCTGCCAGTGGACCTACATCACCACCATGCCCTCAGCACCCAGGGAAGACAGTGGCAGTGCTTCTACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp GAAGGGGTCTCTAGGAGACACAGCTCTGCTGCAGAGTaGTCCTGCTGCTTGGCAGCTCCTTCCACTGTGGTG +
Preference number: 6 (lower is better)
Translates to: EGVSRRHSSAAE*SCCLAAPSTVV
Trigger: CACCACAGTGGAAGGAGCTGCCAAGCAGCAGGAGCACTCTGCAGCAGAGCTGTGTCTCCTAGAGACCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp CAGTTGGCTGCCTCTGATGCCCATACACATCCCACGTaGACAGGCTGCAGCACACGAAAGCGCTTGCCCTTG +
Preference number: 6 (lower is better)
Translates to: QLAASDAHTHPT*TGCSTRKRLPL
Trigger: CAAGGGCAAGCGCTTTCGTGTGCTGCAGCCTGTGCACGTGGGATGTGTATGGGCATCAGAGGCAGCCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp GGAGAGCTGGTTGGAGAAGAGGAGTTGGTGGAGGAGTaGCTCAGTATGGAGTCATCCTCGGGGCAGGACTCC +
Preference number: 6 (lower is better)
Translates to: GELVGEEELVEE*LSMESSSGQDS
Trigger: GGAGTCCTGCCCCGAGGATGACTCCATACTGAGCCACTCCTCCACCAACTCCTCTTCTCCAACCAGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp GGAGCTTCTCCCACCCCGATGTTCTGGGGGTGTGGATaGTCCCTCAGGAGAGCTGGTTGGAGAAGAGGAGTT +
Preference number: 6 (lower is better)
Translates to: GASPTPMFWGCG*SLRRAGWRRGV
Trigger: AACTCCTCTTCTCCAACCAGCTCTCCTGAGGGACCATCCACACCCCCAGAACATCGGGGTGGGAGAAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp GGAGCCTTTGACAAAGTTCTTGGCAACTCTGCAGGCTaGGGTGGAGGGGGAGCTTCTCCCACCCCGATGTTC +
Preference number: 6 (lower is better)
Translates to: GAFDKVLGNSAG*GGGGASPTPMF
Trigger: GAACATCGGGGTGGGAGAAGCTCCCCCTCCACCCCAGCCTGCAGAGTTGCCAAGAACTTTGTCAAAGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp TGGCAGGCACTCCTGGCCAAAGCTCTTGAGCACCTCTaGGTGCACATACCAGCACATACGGAAGTTGGGCCG +
Preference number: 6 (lower is better)
Translates to: WQALLAKALEHL*VHIPAHTEVGP
Trigger: CGGCCCAACTTCCGTATGTGCTGGTATGTGCACCCAGAGGTGCTCAAGAGCTTTGGCCAGGAGTGCCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp GGTGGGACTTGGAAGGGTCAGCAGGCCCCTGCGGCATaGCTCCTGGAATTCATGGATGATCACCTTGCTCCC +
Preference number: 6 (lower is better)
Translates to: GGTWKGQQAPAA*LLEFMDDHLAP
Trigger: GGGAGCAAGGTGATCATCCATGAATTCCAGGAGCAATGCCGCAGGGGCCTGCTGACCCTTCCAAGTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp CTGGCCTTGGATGGCACAGCAACAGCATCCTCCAAGTaGGGCATCTGCAGGTGTGGGGTGGGACTTGGAAGG +
Preference number: 6 (lower is better)
Translates to: LALDGTATASSK*GICRCGVGLGR
Trigger: CCTTCCAAGTCCCACCCCACACCTGCAGATGCCCAACTTGGAGGATGCTGTTGCTGTGCCATCCAAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp TGCAGTTTGCTCCTGCCCTTCTCTGTGGAGCCTTTGACAAAGTTCTaGGCAACTCTGCAGGCTGGGGTGGAGGGGGAGCTTCTCCCACCC +
Preference number: 6 (lower is better)
Translates to: CSLLLPFSVEPLTKF*ATLQAGVEGELLPP
Trigger: GGGTGGGAGAAGCTCCCCCTCCACCCCAGCCTGCAGAGTTGCCAAGAACTTTGTCAAAGGCTCCACAGAGAAGGGCAGGAGCAAACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp ACACATCCCACGTGCACAGGCTGCAGCACACGAAAGCGCTTGCCCTaGGCTAGGAGCTCATCCCACTCCTTGGCCTTCAGCTTCTGGTGT +
Preference number: 6 (lower is better)
Translates to: THPTCTGCSTRKRLP*ARSSSHSLAFSFWC
Trigger: ACACCAGAAGCTGAAGGCCAAGGAGTGGGATGAGCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGCTGCAGCCTGTGCACGTGGGATGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 72 bp CAGCTTCAAGTCGGAACTCGTGCAGTTGGCTGCCTCTaGTGCCCATACACATCCCACGTGCACAGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: QLQVGTRAVGCL*CPYTSHVHRLQ
Trigger: CTGCAGCCTGTGCACGTGGGATGTGTATGGGCATCAGAGGCAGCCAACTGCACGAGTTCCGACTTGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 72 bp GCTCATCAGGGGATGCCACATCCAGCAGGCATGCAGTaGACTGCTGCAGCAGCTTCAAGTCGGAACTCGTGC +
Preference number: 6 (lower is better)
Translates to: AHQGMPHPAGMQ*TAAAASSRNSC
Trigger: GCACGAGTTCCGACTTGAAGCTGCTGCAGCAGTTCACTGCATGCCTGCTGGATGTGGCATCCCCTGATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp TCTAGGAGACACAGCTCTGCTGCAGAGTGCTCCTGCTaGTTGGCAGCTCCTTCCACTGTGGTGACCACACCA +
Preference number: 6 (lower is better)
Translates to: SRRHSSAAECSC*LAAPSTVVTTP
Trigger: TGGTGTGGTCACCACAGTGGAAGGAGCTGCCAAGCAGCAGGAGCACTCTGCAGCAGAGCTGTGTCTCCTAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp GTCTCTAGGAGACACAGCTCTGCTGCAGAGTGCTCCTaGTGCTTGGCAGCTCCTTCCACTGTGGTGACCACA +
Preference number: 6 (lower is better)
Translates to: VSRRHSSAAECS*CLAAPSTVVTT
Trigger: TGTGGTCACCACAGTGGAAGGAGCTGCCAAGCAGCAGGAGCACTCTGCAGCAGAGCTGTGTCTCCTAGAGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp GGGGATGCCACATCCAGCAGGCATGCAGTGAACTGCTaGAGCAGCTTCAAGTCGGAACTCGTGCAGTTGGCT +
Preference number: 6 (lower is better)
Translates to: GDATSSRHAVNC*SSFKSELVQLA
Trigger: AGCCAACTGCACGAGTTCCGACTTGAAGCTGCTGCAGCAGTTCACTGCATGCCTGCTGGATGTGGCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp AGGCACTCCTGGCCAAAGCTCTTGAGCACCTCTGGGTaGACATACCAGCACATACGGAAGTTGGGCCGCTTC +
Preference number: 6 (lower is better)
Translates to: RHSWPKLLSTSG*TYQHIRKLGRF
Trigger: GAAGCGGCCCAACTTCCGTATGTGCTGGTATGTGCACCCAGAGGTGCTCAAGAGCTTTGGCCAGGAGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp GATGTTCTGGGGGTGTGGATGGTCCCTCAGGAGAGCTaGTTGGAGAAGAGGAGTTGGTGGAGGAGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: DVLGVWMVPQES*LEKRSWWRSGS
Trigger: TGAGCCACTCCTCCACCAACTCCTCTTCTCCAACCAGCTCTCCTGAGGGACCATCCACACCCCCAGAACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp AGCAGGCCCCTGCGGCATTGCTCCTGGAATTCATGGATGATCACCTaGCTCCCATTCACATTGCCATGTAGCAGCGGAAGCAACTGGGCC +
Preference number: 6 (lower is better)
Translates to: SRPLRHCSWNSWMIT*LPFTLPCSSGSNWA
Trigger: GGCCCAGTTGCTTCCGCTGCTACATGGCAATGTGAATGGGAGCAAGGTGATCATCCATGAATTCCAGGAGCAATGCCGCAGGGGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp TCAGGGGATGCCACATCCAGCAGGCATGCAGTGAACTaGTGCAGCAGCTTCAAGTCGGAACTCGTGCAGTTG +
Preference number: 6 (lower is better)
Translates to: SGDATSSRHAVN*CSSFKSELVQL
Trigger: CAACTGCACGAGTTCCGACTTGAAGCTGCTGCAGCAGTTCACTGCATGCCTGCTGGATGTGGCATCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp ACCAGCCTGACAGTCACCCGTCCTCTTTGGGTCTCCTaGACTCCCAGGCTCCTCTTCCATGTGACAAGTGAT +
Preference number: 6 (lower is better)
Translates to: TSLTVTRPLWVS*TPRLLFHVTSD
Trigger: ATCACTTGTCACATGGAAGAGGAGCCTGGGAGTCCAGGAGACCCAAAGAGGACGGGTGACTGTCAGGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp TTCTGGGGGTGTGGATGGTCCCTCAGGAGAGCTGGTTaGAGAAGAGGAGTTGGTGGAGGAGTGGCTCAGTAT +
Preference number: 6 (lower is better)
Translates to: FWGCGWSLRRAG*RRGVGGGVAQY
Trigger: ATACTGAGCCACTCCTCCACCAACTCCTCTTCTCCAACCAGCTCTCCTGAGGGACCATCCACACCCCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp ACTGCTGCAGCAGCTTCAAGTCGGAACTCGTGCAGTTaGCTGCCTCTGATGCCCATACACATCCCACGTGCA +
Preference number: 6 (lower is better)
Translates to: TAAAASSRNSCS*LPLMPIHIPRA
Trigger: TGCACGTGGGATGTGTATGGGCATCAGAGGCAGCCAACTGCACGAGTTCCGACTTGAAGCTGCTGCAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp TCTGTAGTGAACCAGCCTGACAGTCACCCGTCCTCTTaGGGTCTCCTGGACTCCCAGGCTCCTCTTCCATGT +
Preference number: 6 (lower is better)
Translates to: SVVNQPDSHPSS*GLLDSQAPLPC
Trigger: ACATGGAAGAGGAGCCTGGGAGTCCAGGAGACCCAAAGAGGACGGGTGACTGTCAGGCTGGTTCACTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp GATGGTCCCTCAGGAGAGCTGGTTGGAGAAGAGGAGTaGGTGGAGGAGTGGCTCAGTATGGAGTCATCCTCG +
Preference number: 6 (lower is better)
Translates to: DGPSGELVGEEE*VEEWLSMESSS
Trigger: CGAGGATGACTCCATACTGAGCCACTCCTCCACCAACTCCTCTTCTCCAACCAGCTCTCCTGAGGGACCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp AACTGCTGCAGCAGCTTCAAGTCGGAACTCGTGCAGTaGGCTGCCTCTGATGCCCATACACATCCCACGTGC +
Preference number: 6 (lower is better)
Translates to: NCCSSFKSELVQ*AASDAHTHPTC
Trigger: GCACGTGGGATGTGTATGGGCATCAGAGGCAGCCAACTGCACGAGTTCCGACTTGAAGCTGCTGCAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp GCAGAGTTCTCAGAGATAAGGCGCTTCAGCCTGGCCTaGGATGGCACAGCAACAGCATCCTCCAAGTTGGGC +
Preference number: 6 (lower is better)
Translates to: AEFSEIRRFSLA*DGTATASSKLG
Trigger: GCCCAACTTGGAGGATGCTGTTGCTGTGCCATCCAAGGCCAGGCTGAAGCGCCTTATCTCTGAGAACTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp CTGCAGTTCTCCGTCAGGTCGATAATGACCACACTCGGTACTGGCTaGATTGTTGCCCTCAAGAAGCTATCAATGGGGCCCTGGCCACCG +
Preference number: 6 (lower is better)
Translates to: LQFSVRSIMTTLGTG*IVALKKLSMGPWPP
Trigger: CGGTGGCCAGGGCCCCATTGATAGCTTCTTGAGGGCAACAATCAAGCCAGTACCGAGTGTGGTCATTATCGACCTGACGGAGAACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp TCTCTATCTCTGTGCAGTTTGCTCCTGCCCTTCTCTGTGGAGCCTTaGACAAAGTTCTTGGCAACTCTGCAGGCTGGGGTGGAGGGGGAG +
Preference number: 6 (lower is better)
Translates to: SLSLCSLLLPFSVEP*TKFLATLQAGVEGE
Trigger: CTCCCCCTCCACCCCAGCCTGCAGAGTTGCCAAGAACTTTGTCAAAGGCTCCACAGAGAAGGGCAGGAGCAAACTGCACAGAGATAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp AGCACACGAAAGCGCTTGCCCTTGGCTAGGAGCTCATCCCACTCCTaGGCCTTCAGCTTCTGGTGTACTTTGTGGTTCTCAGGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: STRKRLPLARSSSHS*AFSFWCTLWFSGSA
Trigger: TGCAGACCCTGAGAACCACAAAGTACACCAGAAGCTGAAGGCCAAGGAGTGGGATGAGCTCCTAGCCAAGGGCAAGCGCTTTCGTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 72 bp TGTGCAGTTTGCTCCTGCCCTTCTCTGTGGAGCCTTTaGCAAAGTTCTTGGCAACTCTGCAGGCTGGGGTGG +
Preference number: 6 (lower is better)
Translates to: CAVCSCPSLWSL*QSSWQLCRLGW
Trigger: CCACCCCAGCCTGCAGAGTTGCCAAGAACTTTGTCAAAGGCTCCACAGAGAAGGGCAGGAGCAAACTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 72 bp CAGCTCGGCACCGTGGAGCCAGCACCATGTGTTCTTTaGTTTCAAAGGGGGCAAACTTACCACAGGAACCGG +
Preference number: 6 (lower is better)
Translates to: QLGTVEPAPCVL*FQRGQTYHRNR
Trigger: CCGGTTCCTGTGGTAAGTTTGCCCCCTTTGAAATCAAAGAACACATGGTGCTGGCTCCACGGTGCCGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000002914.10
ENSMUST00000232828.2
CDS TCA 72 bp GTTCCACGTCCCCCAGTATGCTGGCCGGTGGTTCTCTaGGAACTGCAGAAGCTTCATGCGGCCAAACTTCTT +
Preference number: 6 (lower is better)
Translates to: VPRPPVCWPVVL*ELQKLHAAKLL
Trigger: AAGAAGTTTGGCCGCATGAAGCTTCTGCAGTTCTCAGAGAACCACCGGCCAGCATACTGGGGGACGTGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp TCCCACTCCTTGGCCTTCAGCTTCTGGTGTACTTTGTaGTTCTCAGGGTCTGCACACTCCTCAGTCACGCCT +
Preference number: 6 (lower is better)
Translates to: SHSLAFSFWCTL*FSGSAHSSVTP
Trigger: AGGCGTGACTGAGGAGTGTGCAGACCCTGAGAACCACAAAGTACACCAGAAGCTGAAGGCCAAGGAGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp CTCCCATTCACATTGCCATGTAGCAGCGGAAGCAACTaGGCCAGGATATGCTGGTCCCTCTTTTCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: LPFTLPCSSGSN*ARICWSLFSLL
Trigger: CAGGAGGGAAAAGAGGGACCAGCATATCCTGGCCCAGTTGCTTCCGCTGCTACATGGCAATGTGAATGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp GTTCTCAGAGATAAGGCGCTTCAGCCTGGCCTTGGATaGCACAGCAACAGCATCCTCCAAGTTGGGCATCTG +
Preference number: 6 (lower is better)
Translates to: VLRDKALQPGLG*HSNSILQVGHL
Trigger: CAGATGCCCAACTTGGAGGATGCTGTTGCTGTGCCATCCAAGGCCAGGCTGAAGCGCCTTATCTCTGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp CTGTGCAGTTTGCTCCTGCCCTTCTCTGTGGAGCCTTaGACAAAGTTCTTGGCAACTCTGCAGGCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: LCSLLLPFSVEP*TKFLATLQAGV
Trigger: CACCCCAGCCTGCAGAGTTGCCAAGAACTTTGTCAAAGGCTCCACAGAGAAGGGCAGGAGCAAACTGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp GCTAGGAGCTCATCCCACTCCTTGGCCTTCAGCTTCTGGTGTACTTaGTGGTTCTCAGGGTCTGCACACTCCTCAGTCACGCCTTCATCT +
Preference number: 6 (lower is better)
Translates to: ARSSSHSLAFSFWCT*WFSGSAHSSVTPSS
Trigger: AGATGAAGGCGTGACTGAGGAGTGTGCAGACCCTGAGAACCACAAAGTACACCAGAAGCTGAAGGCCAAGGAGTGGGATGAGCTCCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 72 bp TTTGGGTCTCCTGGACTCCCAGGCTCCTCTTCCATGTaGCAAGTGATGTCTGAAGGGGTCTCTAGGAGACAC +
Preference number: 6 (lower is better)
Translates to: FGSPGLPGSSSM*QVMSEGVSRRH
Trigger: GTGTCTCCTAGAGACCCCTTCAGACATCACTTGTCACATGGAAGAGGAGCCTGGGAGTCCAGGAGACCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 72 bp CCTCGGGGCAGGACTCCAGTATTTCACTCTCTGAAGTaGCACTCCTATCCAGGGACATCATGGGAAGAGAGG +
Preference number: 6 (lower is better)
Translates to: PRGRTPVFHSLK*HSYPGTSWEER
Trigger: CCTCTCTTCCCATGATGTCCCTGGATAGGAGTGTCACTTCAGAGAGTGAAATACTGGAGTCCTGCCCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp GTCGATAATGACCACACTCGGTACTGGCTTGATTGTTaGCCTCAAGAAGCTATCAATGGGGCCCTGGCCACC +
Preference number: 6 (lower is better)
Translates to: VDNDHTRYWLDC*PQEAINGALAT
Trigger: GGTGGCCAGGGCCCCATTGATAGCTTCTTGAGGGCAACAATCAAGCCAGTACCGAGTGTGGTCATTATCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp CTGGCCGGTGGTTCTCTGAGAACTGCAGAAGCTTCATaGGGCCAAACTTCTTCCTTTCAGACACACCGTCCA +
Preference number: 6 (lower is better)
Translates to: LAGGSLRTAEAS*GQTSSFQTHRP
Trigger: TGGACGGTGTGTCTGAAAGGAAGAAGTTTGGCCGCATGAAGCTTCTGCAGTTCTCAGAGAACCACCGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp GTCCCCCAGTATGCTGGCCGGTGGTTCTCTGAGAACTaGAGAAGCTTCATGCGGCCAAACTTCTTCCTTTCA +
Preference number: 6 (lower is better)
Translates to: VPQYAGRWFSEN*RSFMRPNFFLS
Trigger: TGAAAGGAAGAAGTTTGGCCGCATGAAGCTTCTGCAGTTCTCAGAGAACCACCGGCCAGCATACTGGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp TTGGAGAAGAGGAGTTGGTGGAGGAGTGGCTCAGTATaGAGTCATCCTCGGGGCAGGACTCCAGTATTTCAC +
Preference number: 6 (lower is better)
Translates to: LEKRSWWRSGSV*SHPRGRTPVFH
Trigger: GTGAAATACTGGAGTCCTGCCCCGAGGATGACTCCATACTGAGCCACTCCTCCACCAACTCCTCTTCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CCA 72 bp GCCAGGGTCTTGGGAGCCTGCGGAGTCTTCGGTTTCTaGAAGAATCGAGTGATCTCTGCCTTTTCTGCCTTA +
Preference number: 6 (lower is better)
Translates to: ARVLGACGVFGF*KNRVISAFSAL
Trigger: TAAGGCAGAAAAGGCAGAGATCACTCGATTCTTCCAGAAACCGAAGACTCCGCAGGCTCCCAAGACCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002914.10
ENSMUST00000232828.2
CDS CCA 72 bp ATCGCACAGGTCTTGATCCAAGGCAGCTCGGCACCGTaGAGCCAGCACCATGTGTTCTTTGATTTCAAAGGG +
Preference number: 6 (lower is better)
Translates to: IAQVLIQGSSAP*SQHHVFFDFKG
Trigger: CCCTTTGAAATCAAAGAACACATGGTGCTGGCTCCACGGTGCCGAGCTGCCTTGGATCAAGACCTGTGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002914.10
ENSMUST00000232828.2
CDS CAA 72 bp TCATCCCACTCCTTGGCCTTCAGCTTCTGGTGTACTTaGTGGTTCTCAGGGTCTGCACACTCCTCAGTCACG +
Preference number: 6 (lower is better)
Translates to: SSHSLAFSFWCT*WFSGSAHSSVT
Trigger: CGTGACTGAGGAGTGTGCAGACCCTGAGAACCACAAAGTACACCAGAAGCTGAAGGCCAAGGAGTGGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 72 bp GTCATCCTCGGGGCAGGACTCCAGTATTTCACTCTCTaGAGTGACACTCCTATCCAGGGACATCATGGGAAG +
Preference number: 6 (lower is better)
Translates to: VILGAGLQYFTL*SDTPIQGHHGK
Trigger: CTTCCCATGATGTCCCTGGATAGGAGTGTCACTTCAGAGAGTGAAATACTGGAGTCCTGCCCCGAGGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp TCCGTCAGGTCGATAATGACCACACTCGGTACTGGCTaGATTGTTGCCCTCAAGAAGCTATCAATGGGGCCC +
Preference number: 6 (lower is better)
Translates to: SVRSIMTTLGTG*IVALKKLSMGP
Trigger: GGGCCCCATTGATAGCTTCTTGAGGGCAACAATCAAGCCAGTACCGAGTGTGGTCATTATCGACCTGACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp CATTGCTCCTGGAATTCATGGATGATCACCTTGCTCCCATTCACATaGCCATGTAGCAGCGGAAGCAACTGGGCCAGGATATGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: HCSWNSWMITLLPFT*PCSSGSNWARICWS
Trigger: GGACCAGCATATCCTGGCCCAGTTGCTTCCGCTGCTACATGGCAATGTGAATGGGAGCAAGGTGATCATCCATGAATTCCAGGAGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp GATGTGTCTTCCTCAACTTTCTCCTTGGGAACAAGGTTCAGGCGTTaGAAGGGCAAGCGGGCTTGTATTAACCTCTTCACTGGGAACCCG +
Preference number: 6 (lower is better)
Translates to: DVSSSTFSLGTRFRR*KGKRACINLFTGNP
Trigger: CGGGTTCCCAGTGAAGAGGTTAATACAAGCCCGCTTGCCCTTCAAACGCCTGAACCTTGTTCCCAAGGAGAAAGTTGAGGAAGACACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 72 bp CCTCAACTTTCTCCTTGGGAACAAGGTTCAGGCGTTTaGAGGGCAAGCGGGCTTGTATTAACCTCTTCACTG +
Preference number: 6 (lower is better)
Translates to: PQLSPWEQGSGV*RASGLVLTSSL
Trigger: CAGTGAAGAGGTTAATACAAGCCCGCTTGCCCTTCAAACGCCTGAACCTTGTTCCCAAGGAGAAAGTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 72 bp TCACTTGCAAAGTGTGGGAGCAGGTATGGGAGCTTCTaGCACGTCACTCCCAACATCTGGCACATCTATGAT +
Preference number: 6 (lower is better)
Translates to: SLAKCGSRYGSF*HVTPNIWHIYD
Trigger: ATCATAGATGTGCCAGATGTTGGGAGTGACGTGTCAGAAGCTCCCATACCTGCTCCCACACTTTGCAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 72 bp GGAGACAGGGTCATCATAGGGGTATTGCATCCTAGGTaGCATTCTATCTGCCTTGCTGCTCTCCACAATGAC +
Preference number: 6 (lower is better)
Translates to: GDRVIIGVLHPR*HSICLAALHND
Trigger: GTCATTGTGGAGAGCAGCAAGGCAGATAGAATGTCACCTAGGATGCAATACCCCTATGATGACCCTGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232828.2
CDS GCA 72 bp CGGAGTCTTCGGTTTCTGGAAGAATCGAGTGATCTCTaGCTTTTCTGCCTTAATGCGCTTCTCTTCTTCCCG +
Preference number: 6 (lower is better)
Translates to: RSLRFLEESSDL*LFCLNALLFFP
Trigger: CGGGAAGAAGAGAAGCGCATTAAGGCAGAAAAGGCAGAGATCACTCGATTCTTCCAGAAACCGAAGACTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002914.10
ENSMUST00000232828.2
CDS CAA 72 bp TGGAATTCATGGATGATCACCTTGCTCCCATTCACATaGCCATGTAGCAGCGGAAGCAACTGGGCCAGGATA +
Preference number: 6 (lower is better)
Translates to: WNSWMITLLPFT*PCSSGSNWARI
Trigger: TATCCTGGCCCAGTTGCTTCCGCTGCTACATGGCAATGTGAATGGGAGCAAGGTGATCATCCATGAATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp TCCTCAACTTTCTCCTTGGGAACAAGGTTCAGGCGTTaGAAGGGCAAGCGGGCTTGTATTAACCTCTTCACT +
Preference number: 6 (lower is better)
Translates to: SSTFSLGTRFRR*KGKRACINLFT
Trigger: AGTGAAGAGGTTAATACAAGCCCGCTTGCCCTTCAAACGCCTGAACCTTGTTCCCAAGGAGAAAGTTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp CTACGTGAGAGCCTGTGTGACACTGGCTTTCAAAAGTaGCCAAAGACAATTGTAGATCCGGGACTTTGCTTT +
Preference number: 6 (lower is better)
Translates to: LRESLCDTGFQK*PKTIVDPGLCF
Trigger: AAAGCAAAGTCCCGGATCTACAATTGTCTTTGGGCACTTTTGAAAGCCAGTGTCACACAGGCTCTCACGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp CCAAAGACAATTGTAGATCCGGGACTTTGCTTTCCACAGCTGCTTTaGGTGATGTGTCTTCCTCAACTTTCTCCTTGGGAACAAGGTTCA +
Preference number: 6 (lower is better)
Translates to: PKTIVDPGLCFPQLL*VMCLPQLSPWEQGS
Trigger: TGAACCTTGTTCCCAAGGAGAAAGTTGAGGAAGACACATCACCAAAAGCAGCTGTGGAAAGCAAAGTCCCGGATCTACAATTGTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 90 bp CACTGGCTTTCAAAAGTGCCCAAAGACAATTGTAGATCCGGGACTTaGCTTTCCACAGCTGCTTTTGGTGATGTGTCTTCCTCAACTTTC +
Preference number: 6 (lower is better)
Translates to: HWLSKVPKDNCRSGT*LSTAAFGDVSSSTF
Trigger: GAAAGTTGAGGAAGACACATCACCAAAAGCAGCTGTGGAAAGCAAAGTCCCGGATCTACAATTGTCTTTGGGCACTTTTGAAAGCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS TCA 72 bp CTTCTGACACGTCACTCCCAACATCTGGCACATCTATaGTCATACAGTCTGTGTCATCCTCTTCATCCTCTT +
Preference number: 6 (lower is better)
Translates to: LLTRHSQHLAHL*SYSLCHPLHPL
Trigger: AAGAGGATGAAGAGGATGACACAGACTGTATGATCATAGATGTGCCAGATGTTGGGAGTGACGTGTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS GCA 72 bp CAAAAGTGCCCAAAGACAATTGTAGATCCGGGACTTTaGTTTCCACAGCTGCTTTTGGTGATGTGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: QKCPKTIVDPGL*FPQLLLVMCLP
Trigger: AGGAAGACACATCACCAAAAGCAGCTGTGGAAAGCAAAGTCCCGGATCTACAATTGTCTTTGGGCACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10
CDS CAA 72 bp TCAAAAGTGCCCAAAGACAATTGTAGATCCGGGACTTaGCTTTCCACAGCTGCTTTTGGTGATGTGTCTTCC +
Preference number: 6 (lower is better)
Translates to: SKVPKDNCRSGT*LSTAAFGDVSS
Trigger: GGAAGACACATCACCAAAAGCAGCTGTGGAAAGCAAAGTCCCGGATCTACAATTGTCTTTGGGCACTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002914.10